Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0011052

Physical Location & Seq

Genomic Coordinates Reverse (-)

21481335 .. 21487990

Gene Structure 6656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g28500.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGAACTTGTCTCCGAATTCGAATTTTTCAAAAAGGCTCCAAACACGAGGGCACCGCTTTCCTCTGCTCTCACCGAAACCTCACCCCTCCCTCTCCCCCATCTCCTTCGATTCGACACTCCGACTCCATCCTCAAACCATGGTAGTCAACAAGAAGAAGAAGAAGACCGCCACTGCAGCCGTCGCCAACCAAACAAAAACCCTAAGGCGGTGCGATCTATCGTCGGAGCAAGACATAGAAGACTTGTTCAGCCAAGACGAGACCCAGAAAATCAGGGCGTCTCTGCTGAAATGGTACGGCCTCAACCGCAGGGACCTGCCTTGGAGAGAACAAGAGGATGATGTGGAGGTGCGTGTGTACAGGGTTTGGGTCTCGGAAGTGATGCTGCAGCAGACTAGGGTTCAGGCTGTGATTCACTACTTTAATCGTTGGATGAGCAAGTGGCCCACCATTCACAGCCTAGCCCAGGCTTCTCTTGAGGAGGTGAATGAAATGTGGGCTGGGTTGGGATACTACCGACGAGCACGATTTCTTTTAGAGGGAGCCAGGAAGATTGTTGCAGAAGGAGATCAATTTCCTAAAACAGTTTCTCAGCTACGAAAAATACCAGGAATCGGAGACTATACGGCTGGAGCAATTGCCTCAATTGCATTAAAAGAGGCAGTTCCAGTGGTGGATGGAAATGTTATAAGGGTGACTGCTAGACTAAAGGCTATTTCTGCCAATCCAAAAGATTCTTCGACTGTCAAGAAATTTTGGAAACTAGCAGCCCAATTAGTTGACCCTTTCCAGCCTGGGGACTTCAATCAGGCTCTAATGGAGCTTGGTGCAACTGTATGTACACCATCAAGTCCAAGCTGCGGCACATGTCCTGTATCTGACCAATGTTGTGCACTATCAATATCTAGGCATGATAGTTCAGTGGTGGTTACAGATTATCCAATTAAGGTGGTAAAGGCTAAACAAAGACATGAGTTTTCTGCTGTATGTGTTGTGGAAATAGTGGGAGACGAGGAATCATTAAAAAGACACCAGATCAACAATGGGTTTCTTCTGGTAAAAAGGCCTGATGAAGGGTTGCTTGCTGGCCTCTGGGAGTTCCCATCTGTCTCATTGGCAGGAGAAGTGGACTTGCTTGCTAGGAGAAAGGCAATTGACCAATATTTGAAGAAGTATTTCACACTTCAACCCAGAAAGACCTGTGACATAATTTGCAGGGAACATGTGGGAGAATATGTCCATGTTTTCTCTCATATCCGACTCAAGATGTATGTGGAATTGTTGATTTTACGTGTTGAAGGTGGGATAAATGACCTGGTTAGCAAGCGGGACAAAGACATTGTGCCTTGGAAATGTGTGGATGCCAAGGTACTTTCAAACATGGGATTGACGTCTGGTGTAAAAAAGGTATACACTATGGTTCAAAAATTTAGGCGAGGAAATTTGTCTTCTGACCTTAACTTGGACAGCAAGAAAAGAAAGAGGCGAGCAATGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000700 GO:0000701 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009987 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0032404 GO:0032407 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044877 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

HhH-GPD NUDIX_4

Protein Analysis

500

Amino Acids

56.56

Weight (kDa)

9.63

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HhH-GPD	PF00730	2 - 92	3e-09	HhH-GPD superfamily base excision DNA repair protein
HHH	PF00633	26 - 52	1.9e-06	Helix-hairpin-helix motif
NUDIX_4	PF14815	184 - 307	6.4e-12	NUDIX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12740 AT4G12740 AT4G12740
fragaria_vesca	FvH4_3g28500 FvH4_3g28500 FvH4_3g28500 FvH4_3g28500
malus_domestica	MD15G1141300.v1.1
prunus_persica	Prupe.6G214800_v2.0.a1
pyrus_communis	pycom15g12760
rosa_chinensis	RchiOBHm_Chr5g0052821
rosa_laevigata	RLG00000034790
rosa_multiflora	Rmu_ssc0000311.1_g000017
rosa_roxburghii	Rroxscaffold_1G00028640
rosa_rugosa	Rorug05G0269500
rosa_samantha	Rh5AG341500 Rh5BG352200 Rh5CG378900 Rh5DG368500
rosa_wichuraiana	Rw5G032200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	689
AatII	GACGTC	1 cut(s)	1394
Acc36I	ACCTGC	1 cut(s)	324
AccB1I	GGYRCC	1 cut(s)	51
AccI	GTMKAC	1 cut(s)	1410
AciI	CCGC	6 cut(s)	55, 168, 208, 307, 861, 1327
AcsI	RAATTY	5 cut(s)	16, 22, 752, 1427, 1441
AcyI	GRCGYC	2 cut(s)	278, 1391
AfaI	GTAC	4 cut(s)	296, 359, 841, 1371
AfiI	CCNNNNNNNGG	7 cut(s)	207, 466, 614, 796, 860, 1073, 1462
AflIII	ACRYGT	3 cut(s)	866, 1222, 1291
AgsI	TTSAA	7 cut(s)	30, 805, 1168, 1187, 1298, 1377, 1424
AjnI	CCWGG	5 cut(s)	465, 545, 607, 793, 1314
AjuI	GAANNNNNNNTTGG	2 cut(s)	721, 753
AluBI	AGCT	3 cut(s)	595, 823, 858
AluI	AGCT	3 cut(s)	595, 823, 858
Alw21I	GWGCWC	2 cut(s)	526, 895
Alw26I	GTCTC	7 cut(s)	15, 254, 285, 376, 612, 1002, 1114
Alw44I	GTGCAC	1 cut(s)	891
AoxI	GGCC	4 cut(s)	298, 443, 1064, 1087
ApaLI	GTGCAC	1 cut(s)	891
ApeKI	GCWGC	5 cut(s)	176, 385, 388, 767, 858
ApoI	RAATTY	5 cut(s)	16, 22, 752, 1427, 1441
Asp700I	GAANNNNTTC	1 cut(s)	1175
AspS9I	GGNCC	2 cut(s)	313, 444
AsuHPI	GGTGA	4 cut(s)	63, 74, 496, 706
AsuII	TTCGAA	1 cut(s)	20
AvaII	GGWCC	1 cut(s)	313
AxyI	CCTNAGG	1 cut(s)	203
BaeGI	GKGCMC	2 cut(s)	54, 895
BanI	GGYRCC	1 cut(s)	51
BauI	CACGAG	1 cut(s)	45
BbsI	GAAGAC	3 cut(s)	170, 246, 1440
Bbv12I	GWGCWC	2 cut(s)	526, 895
BbvI	GCAGC	5 cut(s)	188, 372, 400, 779, 845
BccI	CCATC	5 cut(s)	107, 135, 671, 853, 1111
BceAI	ACGGC	3 cut(s)	164, 313, 642
BciT130I	CCWGG	5 cut(s)	467, 547, 609, 795, 1316
BciVI	GTATCC	1 cut(s)	503
BcoDI	GTCTC	7 cut(s)	15, 254, 285, 376, 612, 1002, 1114
BfaI	CTAG	6 cut(s)	396, 461, 702, 764, 906, 1140
BfmI	CTRYAG	2 cut(s)	174, 386
BfuAI	ACCTGC	1 cut(s)	324
BfuI	GTATCC	1 cut(s)	503
BisI	GCNGC	6 cut(s)	177, 386, 389, 768, 859, 862
BlsI	GCNGC	6 cut(s)	178, 387, 390, 769, 860, 863
Bme1390I	CCNGG	5 cut(s)	467, 547, 609, 795, 1316
Bme18I	GGWCC	1 cut(s)	313
BmgT120I	GGNCC	2 cut(s)	313, 444
BmiI	GGNNCC	4 cut(s)	38, 53, 314, 544
BmrFI	CCNGG	5 cut(s)	467, 547, 609, 795, 1316
BmsI	GCATC	2 cut(s)	372, 1351
BpiI	GAAGAC	3 cut(s)	170, 246, 1440
BpmI	CTGGAG	1 cut(s)	651
Bpu14I	TTCGAA	1 cut(s)	20
BpuEI	CTTGAG	2 cut(s)	497, 1247
BsaAI	YACGTR	1 cut(s)	1292
BsaHI	GRCGYC	2 cut(s)	278, 1391
BsaI	GGTCTC	2 cut(s)	254, 376
BsaJI	CCNNGG	6 cut(s)	138, 320, 465, 794, 1346, 1365
BsaXI	ACNNNNNCTCC	4 cut(s)	108, 138, 1221, 1251
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 466, 614, 796, 860, 1073, 1462
Bse1I	ACTGG	1 cut(s)	668
Bse21I	CCTNAGG	1 cut(s)	203
Bse3DI	GCAATG	1 cut(s)	1497
BseBI	CCWGG	5 cut(s)	467, 547, 609, 795, 1316
BseDI	CCNNGG	6 cut(s)	138, 320, 465, 794, 1346, 1365
BseGI	GGATG	5 cut(s)	127, 343, 438, 682, 1366
BseLI	CCNNNNNNNGG	7 cut(s)	207, 466, 614, 796, 860, 1073, 1462
BseMI	GCAATG	1 cut(s)	1497
BseMII	CTCAG	1 cut(s)	605
BseNI	ACTGG	1 cut(s)	668
BseRI	GAGGAG	1 cut(s)	494
BseSI	GKGCMC	2 cut(s)	54, 895
BseXI	GCAGC	5 cut(s)	188, 372, 400, 779, 845
BseYI	CCCAGC	1 cut(s)	500
BshFI	GGCC	4 cut(s)	300, 445, 1066, 1089
BshNI	GGYRCC	1 cut(s)	51
BsiHKAI	GWGCWC	2 cut(s)	526, 895
BslFI	GGGAC	3 cut(s)	326, 812, 1343
BslI	CCNNNNNNNGG	7 cut(s)	207, 466, 614, 796, 860, 1073, 1462
BsmAI	GTCTC	7 cut(s)	15, 254, 285, 376, 612, 1002, 1114
BsmBI	CGTCTC	2 cut(s)	285, 1002
BsmFI	GGGAC	3 cut(s)	326, 812, 1343
BsnI	GGCC	4 cut(s)	300, 445, 1066, 1089
Bso31I	GGTCTC	2 cut(s)	254, 376
Bsp119I	TTCGAA	1 cut(s)	20
Bsp1286I	GDGCHC	3 cut(s)	54, 526, 895
Bsp1407I	TGTACA	2 cut(s)	357, 839
Bsp143I	GATC	3 cut(s)	214, 568, 1035
Bsp19I	CCATGG	1 cut(s)	138
BspACI	CCGC	6 cut(s)	55, 168, 208, 307, 861, 1327
BspANI	GGCC	4 cut(s)	300, 445, 1066, 1089
BspCNI	CTCAG	1 cut(s)	604
BspLI	GGNNCC	4 cut(s)	38, 53, 314, 544
BspMAI	CTGCAG	2 cut(s)	178, 390
BspMI	ACCTGC	1 cut(s)	324
BspT104I	TTCGAA	1 cut(s)	20
BspT107I	GGYRCC	1 cut(s)	51
BspTNI	GGTCTC	2 cut(s)	254, 376
BsrDI	GCAATG	1 cut(s)	1497
BsrGI	TGTACA	2 cut(s)	357, 839
BsrI	ACTGG	1 cut(s)	668
BssECI	CCNNGG	6 cut(s)	138, 320, 465, 794, 1346, 1365
BssMI	GATC	3 cut(s)	214, 568, 1035
BssNAI	GTATAC	1 cut(s)	1411
BssNI	GRCGYC	2 cut(s)	278, 1391
BssSI	CACGAG	1 cut(s)	45
BssT1I	CCWWGG	4 cut(s)	138, 320, 1346, 1365
Bst1107I	GTATAC	1 cut(s)	1411
Bst2BI	CACGAG	1 cut(s)	45
Bst2UI	CCWGG	5 cut(s)	467, 547, 609, 795, 1316
Bst4CI	ACNGT	3 cut(s)	586, 745, 835
BstACI	GRCGYC	2 cut(s)	278, 1391
BstAUI	TGTACA	2 cut(s)	357, 839
BstBAI	YACGTR	1 cut(s)	1292
BstBI	TTCGAA	1 cut(s)	20
BstC8I	GCNNGC	5 cut(s)	1083, 1087, 1137, 1325, 1488
BstDEI	CTNAG	2 cut(s)	203, 591
BstDSI	CCRYGG	1 cut(s)	138
BstENI	CCTNNNNNAGG	2 cut(s)	464, 1071
BstF5I	GGATG	5 cut(s)	127, 343, 438, 682, 1366
BstKTI	GATC	3 cut(s)	217, 571, 1038
BstMAI	GTCTC	7 cut(s)	15, 254, 285, 376, 612, 1002, 1114
BstMBI	GATC	3 cut(s)	214, 568, 1035
BstMWI	GCNNNNNNNGC	5 cut(s)	176, 182, 306, 647, 719
BstNI	CCWGG	5 cut(s)	467, 547, 609, 795, 1316
BstNSI	RCATGY	2 cut(s)	870, 1226
BstSCI	CCNGG	5 cut(s)	465, 545, 607, 793, 1314
BstSFI	CTRYAG	2 cut(s)	174, 386
BstSLI	GKGCMC	2 cut(s)	54, 895
BstV1I	GCAGC	5 cut(s)	188, 372, 400, 779, 845
BstV2I	GAAGAC	3 cut(s)	170, 246, 1440
BstZ17I	GTATAC	1 cut(s)	1411
Bsu36I	CCTNAGG	1 cut(s)	203
BsuI	GTATCC	1 cut(s)	503
BsuRI	GGCC	4 cut(s)	300, 445, 1066, 1089
BtgI	CCRYGG	1 cut(s)	138
BtsCI	GGATG	5 cut(s)	127, 343, 438, 682, 1366
BtsI	GCAGTG	1 cut(s)	171
BtsIMutI	CAGTG	3 cut(s)	171, 675, 927
BveI	ACCTGC	1 cut(s)	324
Cac8I	GCNNGC	5 cut(s)	1083, 1087, 1137, 1325, 1488
Cfr13I	GGNCC	2 cut(s)	313, 444
CseI	GACGC	1 cut(s)	267
CsiI	ACCWGGT	1 cut(s)	1314
Csp6I	GTAC	4 cut(s)	295, 358, 840, 1370
CspCI	CAANNNNNGTGG	2 cut(s)	930, 965
CviAII	CATG	7 cut(s)	139, 867, 911, 971, 1223, 1241, 1381
CviQI	GTAC	4 cut(s)	295, 358, 840, 1370
DdeI	CTNAG	2 cut(s)	203, 591
DpnI	GATC	3 cut(s)	216, 570, 1037
DpnII	GATC	3 cut(s)	214, 568, 1035
Eco130I	CCWWGG	4 cut(s)	138, 320, 1346, 1365
Eco147I	AGGCCT	1 cut(s)	1066
Eco31I	GGTCTC	2 cut(s)	254, 376
Eco47I	GGWCC	1 cut(s)	313
Eco81I	CCTNAGG	1 cut(s)	203
EcoNI	CCTNNNNNAGG	2 cut(s)	464, 1071
EcoO109I	RGGNCCY	1 cut(s)	313
EcoRI	GAATTC	1 cut(s)	16
EcoRII	CCWGG	5 cut(s)	465, 545, 607, 793, 1314
EcoT14I	CCWWGG	4 cut(s)	138, 320, 1346, 1365
ErhI	CCWWGG	4 cut(s)	138, 320, 1346, 1365
Esp3I	CGTCTC	2 cut(s)	285, 1002
FaeI	CATG	7 cut(s)	142, 870, 914, 974, 1226, 1244, 1384
FalI	AAGNNNNNCTT	2 cut(s)	1065, 1097
FaqI	GGGAC	3 cut(s)	326, 812, 1343
FatI	CATG	7 cut(s)	138, 866, 910, 970, 1222, 1240, 1380
FauI	CCCGC	1 cut(s)	1320
FblI	GTMKAC	1 cut(s)	1410
Fnu4HI	GCNGC	6 cut(s)	177, 386, 389, 768, 859, 862
FokI	GGATG	5 cut(s)	114, 350, 445, 689, 1373
Fsp4HI	GCNGC	6 cut(s)	177, 386, 389, 768, 859, 862
FspBI	CTAG	6 cut(s)	396, 461, 702, 764, 906, 1140
GluI	GCNGC	6 cut(s)	177, 386, 389, 768, 859, 862
GsaI	CCCAGC	1 cut(s)	504
GsuI	CTGGAG	1 cut(s)	651
HaeIII	GGCC	4 cut(s)	300, 445, 1066, 1089
HgaI	GACGC	1 cut(s)	267
Hin1I	GRCGYC	2 cut(s)	278, 1391
Hin1II	CATG	7 cut(s)	142, 870, 914, 974, 1226, 1244, 1384
HincII	GTYRAC	2 cut(s)	148, 781
HindII	GTYRAC	2 cut(s)	148, 781
HinfI	GANTC	7 cut(s)	110, 123, 412, 612, 734, 1016, 1260
HphI	GGTGA	4 cut(s)	63, 74, 496, 706
Hpy166II	GTNNAC	7 cut(s)	148, 358, 781, 842, 893, 1129, 1411
Hpy188I	TCNGA	8 cut(s)	15, 122, 226, 376, 617, 880, 1259, 1453
Hpy188III	TCNNGA	3 cut(s)	476, 748, 1264
Hpy8I	GTNNAC	7 cut(s)	148, 358, 781, 842, 893, 1129, 1411
Hpy99I	CGWCG	3 cut(s)	185, 226, 522
HpyAV	CCTTC	4 cut(s)	115, 557, 1067, 1292
HpyCH4III	ACNGT	3 cut(s)	586, 745, 835
HpyCH4IV	ACGT	2 cut(s)	1291, 1391
HpyCH4V	TGCA	7 cut(s)	176, 388, 560, 650, 830, 893, 1215
HpyF10VI	GCNNNNNNNGC	5 cut(s)	176, 182, 306, 647, 719
HpyF3I	CTNAG	2 cut(s)	203, 591
HpySE526I	ACGT	2 cut(s)	1291, 1391
Hsp92I	GRCGYC	2 cut(s)	278, 1391
Hsp92II	CATG	7 cut(s)	142, 870, 914, 974, 1226, 1244, 1384
Kzo9I	GATC	3 cut(s)	214, 568, 1035
LmnI	GCTCC	5 cut(s)	42, 226, 542, 632, 820
Lsp1109I	GCAGC	5 cut(s)	188, 372, 400, 779, 845
LweI	GCATC	2 cut(s)	372, 1351
MabI	ACCWGGT	1 cut(s)	1314
MaeI	CTAG	6 cut(s)	396, 461, 702, 764, 906, 1140
MaeII	ACGT	2 cut(s)	1291, 1391
MaeIII	GTNAC	3 cut(s)	694, 928, 1202
MalI	GATC	3 cut(s)	216, 570, 1037
MboI	GATC	3 cut(s)	214, 568, 1035
MfeI	CAATTG	3 cut(s)	636, 645, 1152
MhlI	GDGCHC	3 cut(s)	54, 526, 895
MlyI	GAGTC	2 cut(s)	117, 1254
MmeI	TCCRAC	4 cut(s)	145, 204, 410, 1282
MroXI	GAANNNNTTC	1 cut(s)	1175
MseI	TTAA	5 cut(s)	423, 653, 945, 1022, 1458
MspR9I	CCNGG	5 cut(s)	467, 547, 609, 795, 1316
MunI	CAATTG	3 cut(s)	636, 645, 1152
MvaI	CCWGG	5 cut(s)	467, 547, 609, 795, 1316
MwoI	GCNNNNNNNGC	5 cut(s)	176, 182, 306, 647, 719
NcoI	CCATGG	1 cut(s)	138
NdeII	GATC	3 cut(s)	214, 568, 1035
NlaIII	CATG	7 cut(s)	142, 870, 914, 974, 1226, 1244, 1384
NlaIV	GGNNCC	4 cut(s)	38, 53, 314, 544
NmuCI	GTSAC	2 cut(s)	694, 1202
NspI	RCATGY	2 cut(s)	870, 1226
NspV	TTCGAA	1 cut(s)	20
PceI	AGGCCT	1 cut(s)	1066
PciI	ACATGT	2 cut(s)	866, 1222
PdmI	GAANNNNTTC	1 cut(s)	1175
PfeI	GAWTC	5 cut(s)	110, 412, 612, 734, 1016
PkrI	GCNGC	6 cut(s)	178, 387, 390, 769, 860, 863
PleI	GAGTC	2 cut(s)	117, 1254
PpsI	GAGTC	2 cut(s)	117, 1254
Ppu21I	YACGTR	1 cut(s)	1292
PpuMI	RGGWCCY	1 cut(s)	313
PscI	ACATGT	2 cut(s)	866, 1222
PsiI	TTATAA	1 cut(s)	689
Psp5II	RGGWCCY	1 cut(s)	313
Psp6I	CCWGG	5 cut(s)	465, 545, 607, 793, 1314
PspFI	CCCAGC	1 cut(s)	500
PspGI	CCWGG	5 cut(s)	465, 545, 607, 793, 1314
PspN4I	GGNNCC	4 cut(s)	38, 53, 314, 544
PspPI	GGNCC	2 cut(s)	313, 444
PspPPI	RGGWCCY	1 cut(s)	313
PstI	CTGCAG	2 cut(s)	178, 390
RsaI	GTAC	4 cut(s)	296, 359, 841, 1371
RsaNI	GTAC	4 cut(s)	295, 358, 840, 1370
SaqAI	TTAA	5 cut(s)	423, 653, 945, 1022, 1458
SatI	GCNGC	6 cut(s)	177, 386, 389, 768, 859, 862
Sau3AI	GATC	3 cut(s)	214, 568, 1035
Sau96I	GGNCC	2 cut(s)	313, 444
SchI	GAGTC	2 cut(s)	117, 1254
ScrFI	CCNGG	5 cut(s)	467, 547, 609, 795, 1316
SduI	GDGCHC	3 cut(s)	54, 526, 895
SexAI	ACCWGGT	1 cut(s)	1314
SfaNI	GCATC	2 cut(s)	372, 1351
SfcI	CTRYAG	2 cut(s)	174, 386
SfuI	TTCGAA	1 cut(s)	20
SinI	GGWCC	1 cut(s)	313
SmlI	CTYRAG	2 cut(s)	476, 1262
SmoI	CTYRAG	2 cut(s)	476, 1262
SseBI	AGGCCT	1 cut(s)	1066
SsiI	CCGC	6 cut(s)	55, 168, 208, 307, 861, 1327
SspI	AATATT	1 cut(s)	1163
SspMI	CTAG	6 cut(s)	396, 461, 702, 764, 906, 1140
StuI	AGGCCT	1 cut(s)	1066
StyD4I	CCNGG	5 cut(s)	465, 545, 607, 793, 1314
StyI	CCWWGG	4 cut(s)	138, 320, 1346, 1365
TaaI	ACNGT	3 cut(s)	586, 745, 835
TaiI	ACGT	2 cut(s)	1294, 1394
TaqI	TCGA	4 cut(s)	20, 108, 113, 740
TatI	WGTACW	2 cut(s)	357, 839
TauI	GCSGC	1 cut(s)	864
TfiI	GAWTC	5 cut(s)	110, 412, 612, 734, 1016
Tru1I	TTAA	5 cut(s)	423, 653, 945, 1022, 1458
Tru9I	TTAA	5 cut(s)	423, 653, 945, 1022, 1458
TscAI	CASTG	3 cut(s)	178, 675, 927
TseFI	GTSAC	2 cut(s)	694, 1202
TseI	GCWGC	5 cut(s)	176, 385, 388, 767, 858
Tsp45I	GTSAC	2 cut(s)	694, 1202
TspDTI	ATGAA	3 cut(s)	17, 504, 1086
TspRI	CASTG	3 cut(s)	178, 675, 927
VneI	GTGCAC	1 cut(s)	891
VpaK11BI	GGWCC	1 cut(s)	313
XagI	CCTNNNNNAGG	2 cut(s)	464, 1071
XapI	RAATTY	5 cut(s)	16, 22, 752, 1427, 1441
XceI	RCATGY	2 cut(s)	870, 1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1040
XmiI	GTMKAC	1 cut(s)	1410
XmnI	GAANNNNTTC	1 cut(s)	1175
XspI	CTAG	6 cut(s)	396, 461, 702, 764, 906, 1140
ZraI	GACGTC	1 cut(s)	1392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.