Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0011052

Physical Location & Seq

Genomic Coordinates Reverse (-)

10424671 .. 10427962

Gene Structure 3292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1141300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGATTTCGGACAGGACCAGGAGCAAGAGTAGCAGCCGGAAGAAGAAGGATATGGGGAATGCATTTGTTGTTGTTCCCGATCAAAAAACAACAACTAAAAGAGCAGCACCGGCGTCGCAAAGACAAACGCAGAGGCGACGGCAATCGGCCAAGGAAAAGGAAGTACAAGACATCGAAGACATAGAAGATTTGTTCAGCCAAGAGGAGACCCAGAGAATTAGGAAGTCTCTGCTGGAATGGTACGCCCTCAACCGCAGAGAGCTCCCGTGGAGAGAAGTGGAAGCTGGGGAGGACCTTGAGATAAGAGCCTACAGGGTGTGGGTCTCGGAAGTGATGCTGCAACAGACGAGGGTTCAGACTGTTATTCAGTACTACCACCGTTGGCTGCTCAAATGGCCCACCATTCACCACCTCGCCCGGGCTTCTCTTGAGGAGGTGAACGAAATGTGGGCAGGTTTGGGCTACTACCGACGCGCCCGATTTCTTTTAGAGGGAGCTAGAATGATTGTTGCAGAAGGAGTTCAATTTCCTAAAACAGTTTCTCAACTACGAAAAGTTCCGGGAATTGGAGACTATACAGCTGGAGCAATAGCTTCGATCGCATTTAAAGTGGTGGTTCCCGTGGTTGATGGAAATGTAATAAGGGTGATCGCTAGACTAAGGGCTATTTCTGCCAATCCAAAAGACTCTTTGACTGTCAAGAAATTTTGGAAACTAGCAGCTCAGTTAGTTGATCCTTTCCAGCCTGGGGATTTCAATCAGGCCCTCATGGAGCTTGGCGCAACTGTATGTACCCCATTGAGTCCAAGCTGCAGCTCATGTCCTGCATCAGGCCAATGTCGTGCACTGTCAATTTCTAGGCAAGATAGTTCAGTGCTGGTTACAGATTATCCAGTTAAGGTGGTAAAGGCCAAACAGAGACGTGATTTTTCTGCTGTATGTGTGGTTGAAATATTAGGAGATGAGGAACCATCAGATGGGCACCAAATCAACAATGGGTTTCTTCTTGTAAAACGACCTGATGAAGGGTTGCTTGCTGGCCTCTGGGAGTTCCCATCTGTCCTGCTGGCTGGAGAAGCTGACTTGGTCACTAGGAGAGAAGAAATTGACAAATATTTAAATAAGCATTTTAGACTAAACCCCTGCGACATAGTTTCAAGGGAATATGTTGGAGAATATGTCCATGTTTTCTCTCACATTCGTCTCAAGATGTACGTGGAATGGTTGGTGTTACATATAAAAGGTGGGATGGTTAGCAAGCAGCTCAAAGAAACTGTGCCTTGGAAATGCGTAGATGACAAGGTCCTTTCAAGCCTGGGGTTGACATCTGGTGTAAGAAAGGTGATGTCATACTTCAACATATCGAAGCTTCTGAATTTGCTATTTCGAAATCTAGTTTATACCAACTCCGCCTATGTCTTACATGGCCGGTCCCAAGCCCGGATAAAGGAGGAGGGGGAGGGCGTCAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000700 GO:0000701 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009987 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0032404 GO:0032407 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044877 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

HhH-GPD NUDIX_4

Protein Analysis

491

Amino Acids

55.79

Weight (kDa)

9.42

Isoelectric Point (pI)

48.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HhH-GPD	PF00730	108 - 240	5.5e-23	HhH-GPD superfamily base excision DNA repair protein
HHH	PF00633	175 - 200	3.6e-06	Helix-hairpin-helix motif
NUDIX_4	PF14815	332 - 450	1.9e-12	NUDIX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12740 AT4G12740 AT4G12740
fragaria_vesca	FvH4_3g28500 FvH4_3g28500 FvH4_3g28500 FvH4_3g28500
malus_domestica	MD15G1141300.v1.1
prunus_persica	Prupe.6G214800_v2.0.a1
pyrus_communis	pycom15g12760
rosa_chinensis	RchiOBHm_Chr5g0052821
rosa_laevigata	RLG00000034790
rosa_multiflora	Rmu_ssc0000311.1_g000017
rosa_roxburghii	Rroxscaffold_1G00028640
rosa_rugosa	Rorug05G0269500
rosa_samantha	Rh5AG341500 Rh5BG352200 Rh5CG378900 Rh5DG368500
rosa_wichuraiana	Rw5G032200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	443
AccB1I	GGYRCC	1 cut(s)	981
AccB7I	CCANNNNNTGG	1 cut(s)	977
AccII	CGCG	1 cut(s)	474
AciI	CCGC	2 cut(s)	253, 1410
AclWI	GGATC	1 cut(s)	728
AcoI	YGGCCR	2 cut(s)	147, 1426
AcsI	RAATTY	2 cut(s)	704, 1375
AcyI	GRCGYC	2 cut(s)	113, 1464
AfaI	GTAC	5 cut(s)	165, 242, 371, 793, 1214
AfiI	CCNNNNNNNGG	8 cut(s)	418, 566, 748, 830, 977, 1025, 1440, 1447
AgsI	TTSAA	6 cut(s)	524, 757, 950, 1158, 1311, 1357
AjiI	CACGTC	1 cut(s)	923
AjnI	CCWGG	3 cut(s)	17, 745, 1314
Alw21I	GWGCWC	2 cut(s)	264, 847
Alw26I	GTCTC	6 cut(s)	200, 231, 328, 564, 913, 1208
Alw44I	GTGCAC	1 cut(s)	843
AlwI	GGATC	1 cut(s)	728
Ama87I	CYCGRG	1 cut(s)	417
AoxI	GGCC	7 cut(s)	147, 395, 762, 832, 909, 1039, 1426
ApaLI	GTGCAC	1 cut(s)	843
ApeKI	GCWGC	8 cut(s)	33, 104, 337, 385, 719, 810, 813, 1261
ApoI	RAATTY	2 cut(s)	704, 1375
Asp700I	GAANNNNTTC	1 cut(s)	519
AspLEI	GCGC	2 cut(s)	476, 782
AspS9I	GGNCC	6 cut(s)	15, 292, 396, 763, 1303, 1431
AsuC2I	CCSGG	4 cut(s)	418, 419, 561, 1441
AsuHPI	GGTGA	4 cut(s)	398, 448, 658, 1354
AsuII	TTCGAA	1 cut(s)	1387
AvaI	CYCGRG	1 cut(s)	417
AvaII	GGWCC	4 cut(s)	15, 292, 1303, 1431
BaeGI	GKGCMC	2 cut(s)	847, 984
BanI	GGYRCC	1 cut(s)	981
BanII	GRGCYC	1 cut(s)	264
BbsI	GAAGAC	1 cut(s)	183
Bbv12I	GWGCWC	2 cut(s)	264, 847
BbvI	GCAGC	8 cut(s)	45, 116, 324, 372, 731, 797, 825, 1273
BccI	CCATC	5 cut(s)	623, 971, 979, 1063, 1243
BceAI	ACGGC	1 cut(s)	155
BcgI	CGANNNNNNTGC	4 cut(s)	96, 130, 576, 610
BciT130I	CCWGG	3 cut(s)	19, 747, 1316
BcnI	CCSGG	4 cut(s)	418, 419, 561, 1441
BcoDI	GTCTC	6 cut(s)	200, 231, 328, 564, 913, 1208
BfaI	CTAG	6 cut(s)	498, 654, 716, 858, 1092, 1394
BfmI	CTRYAG	2 cut(s)	310, 811
BfuAI	ACCTGC	1 cut(s)	443
BisI	GCNGC	8 cut(s)	34, 105, 338, 386, 720, 811, 814, 1262
BlsI	GCNGC	8 cut(s)	35, 106, 339, 387, 721, 812, 815, 1263
BmcAI	AGTACT	1 cut(s)	371
Bme1390I	CCNGG	7 cut(s)	19, 418, 419, 561, 747, 1316, 1441
Bme18I	GGWCC	4 cut(s)	15, 292, 1303, 1431
BmeT110I	CYCGRG	1 cut(s)	417
BmgBI	CACGTC	1 cut(s)	923
BmgT120I	GGNCC	6 cut(s)	15, 292, 396, 763, 1303, 1431
BmiI	GGNNCC	4 cut(s)	618, 969, 983, 1433
BmrFI	CCNGG	7 cut(s)	19, 418, 419, 561, 747, 1316, 1441
BmsI	GCATC	2 cut(s)	324, 836
BpiI	GAAGAC	1 cut(s)	183
BpmI	CTGGAG	2 cut(s)	603, 1092
Bpu14I	TTCGAA	1 cut(s)	1387
BpuEI	CTTGAG	3 cut(s)	317, 449, 1190
BpuMI	CCSGG	4 cut(s)	418, 419, 561, 1441
BsaAI	YACGTR	1 cut(s)	1216
BsaBI	GATNNNNATC	1 cut(s)	756
BsaHI	GRCGYC	2 cut(s)	113, 1464
BsaI	GGTCTC	2 cut(s)	200, 328
BsaJI	CCNNGG	7 cut(s)	150, 266, 417, 621, 746, 1280, 1315
BsaXI	ACNNNNNCTCC	4 cut(s)	13, 43, 1164, 1194
Bsc4I	CCNNNNNNNGG	8 cut(s)	418, 566, 748, 830, 977, 1025, 1440, 1447
Bse118I	RCCGGY	2 cut(s)	109, 1428
Bse1I	ACTGG	1 cut(s)	893
Bse8I	GATNNNNATC	1 cut(s)	756
BseBI	CCWGG	3 cut(s)	19, 747, 1316
BseDI	CCNNGG	7 cut(s)	150, 266, 417, 621, 746, 1280, 1315
BseGI	GGATG	1 cut(s)	1254
BseJI	GATNNNNATC	1 cut(s)	756
BseLI	CCNNNNNNNGG	8 cut(s)	418, 566, 748, 830, 977, 1025, 1440, 1447
BseMII	CTCAG	1 cut(s)	737
BseNI	ACTGG	1 cut(s)	893
BseRI	GAGGAG	3 cut(s)	218, 446, 1466
BseSI	GKGCMC	2 cut(s)	847, 984
BseXI	GCAGC	8 cut(s)	45, 116, 324, 372, 731, 797, 825, 1273
BseYI	CCCAGC	1 cut(s)	284
Bsh1236I	CGCG	1 cut(s)	474
Bsh1285I	CGRYCG	1 cut(s)	600
BshFI	GGCC	7 cut(s)	149, 397, 764, 834, 911, 1041, 1428
BshNI	GGYRCC	1 cut(s)	981
BsiEI	CGRYCG	1 cut(s)	600
BsiHKAI	GWGCWC	2 cut(s)	264, 847
BsiHKCI	CYCGRG	1 cut(s)	417
BsiSI	CCGG	6 cut(s)	37, 110, 418, 560, 1429, 1441
BslFI	GGGAC	1 cut(s)	1417
BslI	CCNNNNNNNGG	8 cut(s)	418, 566, 748, 830, 977, 1025, 1440, 1447
BsmAI	GTCTC	6 cut(s)	200, 231, 328, 564, 913, 1208
BsmBI	CGTCTC	2 cut(s)	913, 1208
BsmFI	GGGAC	1 cut(s)	1417
BsmI	GAATGC	1 cut(s)	64
BsnI	GGCC	7 cut(s)	149, 397, 764, 834, 911, 1041, 1428
Bso31I	GGTCTC	2 cut(s)	200, 328
BsoBI	CYCGRG	1 cut(s)	417
Bsp119I	TTCGAA	1 cut(s)	1387
Bsp1286I	GDGCHC	3 cut(s)	264, 847, 984
Bsp143I	GATC	4 cut(s)	79, 597, 648, 733
BspACI	CCGC	2 cut(s)	253, 1410
BspANI	GGCC	7 cut(s)	149, 397, 764, 834, 911, 1041, 1428
BspCNI	CTCAG	1 cut(s)	736
BspFNI	CGCG	1 cut(s)	474
BspLI	GGNNCC	4 cut(s)	618, 969, 983, 1433
BspMAI	CTGCAG	1 cut(s)	815
BspMI	ACCTGC	1 cut(s)	443
BspPI	GGATC	1 cut(s)	728
BspT104I	TTCGAA	1 cut(s)	1387
BspT107I	GGYRCC	1 cut(s)	981
BspTNI	GGTCTC	2 cut(s)	200, 328
BsrFI	RCCGGY	2 cut(s)	109, 1428
BsrI	ACTGG	1 cut(s)	893
BssAI	RCCGGY	2 cut(s)	109, 1428
BssECI	CCNNGG	7 cut(s)	150, 266, 417, 621, 746, 1280, 1315
BssMI	GATC	4 cut(s)	79, 597, 648, 733
BssNI	GRCGYC	2 cut(s)	113, 1464
BssT1I	CCWWGG	2 cut(s)	150, 1280
Bst2UI	CCWGG	3 cut(s)	19, 747, 1316
Bst4CI	ACNGT	7 cut(s)	361, 380, 538, 697, 787, 849, 1276
BstACI	GRCGYC	2 cut(s)	113, 1464
BstBAI	YACGTR	1 cut(s)	1216
BstBI	TTCGAA	1 cut(s)	1387
BstC8I	GCNNGC	4 cut(s)	1035, 1039, 1068, 1259
BstDEI	CTNAG	2 cut(s)	659, 723
BstDSI	CCRYGG	2 cut(s)	266, 621
BstENI	CCTNNNNNAGG	2 cut(s)	828, 1023
BstF5I	GGATG	1 cut(s)	1254
BstFNI	CGCG	1 cut(s)	474
BstHHI	GCGC	2 cut(s)	476, 782
BstKTI	GATC	4 cut(s)	82, 600, 651, 736
BstMAI	GTCTC	6 cut(s)	200, 231, 328, 564, 913, 1208
BstMBI	GATC	4 cut(s)	79, 597, 648, 733
BstMCI	CGRYCG	1 cut(s)	600
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 110, 394, 599, 671, 1076
BstNI	CCWGG	3 cut(s)	19, 747, 1316
BstSCI	CCNGG	7 cut(s)	17, 416, 417, 559, 745, 1314, 1439
BstSFI	CTRYAG	2 cut(s)	310, 811
BstSLI	GKGCMC	2 cut(s)	847, 984
BstUI	CGCG	1 cut(s)	474
BstV1I	GCAGC	8 cut(s)	45, 116, 324, 372, 731, 797, 825, 1273
BstV2I	GAAGAC	1 cut(s)	183
BsuRI	GGCC	7 cut(s)	149, 397, 764, 834, 911, 1041, 1428
BtgI	CCRYGG	2 cut(s)	266, 621
BtrI	CACGTC	1 cut(s)	923
BtsCI	GGATG	1 cut(s)	1254
BtsIMutI	CAGTG	2 cut(s)	845, 879
BveI	ACCTGC	1 cut(s)	443
Cac8I	GCNNGC	4 cut(s)	1035, 1039, 1068, 1259
CfoI	GCGC	2 cut(s)	476, 782
Cfr10I	RCCGGY	2 cut(s)	109, 1428
Cfr13I	GGNCC	6 cut(s)	15, 292, 396, 763, 1303, 1431
Cfr9I	CCCGGG	1 cut(s)	417
CseI	GACGC	3 cut(s)	102, 480, 1453
Csp6I	GTAC	5 cut(s)	164, 241, 370, 792, 1213
CviAII	CATG	4 cut(s)	769, 819, 1184, 1424
CviQI	GTAC	5 cut(s)	164, 241, 370, 792, 1213
DdeI	CTNAG	2 cut(s)	659, 723
DpnI	GATC	4 cut(s)	81, 599, 650, 735
DpnII	GATC	4 cut(s)	79, 597, 648, 733
DraI	TTTAAA	2 cut(s)	607, 1119
EaeI	YGGCCR	2 cut(s)	147, 1426
EciI	GGCGGA	1 cut(s)	1399
Ecl136II	GAGCTC	1 cut(s)	262
Eco130I	CCWWGG	2 cut(s)	150, 1280
Eco24I	GRGCYC	1 cut(s)	264
Eco31I	GGTCTC	2 cut(s)	200, 328
Eco47I	GGWCC	4 cut(s)	15, 292, 1303, 1431
Eco53kI	GAGCTC	1 cut(s)	262
Eco88I	CYCGRG	1 cut(s)	417
EcoICRI	GAGCTC	1 cut(s)	262
EcoNI	CCTNNNNNAGG	2 cut(s)	828, 1023
EcoO109I	RGGNCCY	3 cut(s)	292, 763, 1303
EcoRII	CCWGG	3 cut(s)	17, 745, 1314
EcoT14I	CCWWGG	2 cut(s)	150, 1280
EcoT22I	ATGCAT	1 cut(s)	64
EcoT38I	GRGCYC	1 cut(s)	264
ErhI	CCWWGG	2 cut(s)	150, 1280
Esp3I	CGTCTC	2 cut(s)	913, 1208
FaeI	CATG	4 cut(s)	772, 822, 1187, 1427
FalI	AAGNNNNNCTT	2 cut(s)	1017, 1049
FaqI	GGGAC	1 cut(s)	1417
FatI	CATG	4 cut(s)	768, 818, 1183, 1423
Fnu4HI	GCNGC	8 cut(s)	34, 105, 338, 386, 720, 811, 814, 1262
FokI	GGATG	1 cut(s)	1261
FriOI	GRGCYC	1 cut(s)	264
Fsp4HI	GCNGC	8 cut(s)	34, 105, 338, 386, 720, 811, 814, 1262
FspBI	CTAG	6 cut(s)	498, 654, 716, 858, 1092, 1394
GlaI	GCGC	2 cut(s)	475, 781
GluI	GCNGC	8 cut(s)	34, 105, 338, 386, 720, 811, 814, 1262
GsaI	CCCAGC	1 cut(s)	288
GsuI	CTGGAG	2 cut(s)	603, 1092
HaeIII	GGCC	7 cut(s)	149, 397, 764, 834, 911, 1041, 1428
HapII	CCGG	6 cut(s)	37, 110, 418, 560, 1429, 1441
HgaI	GACGC	3 cut(s)	102, 480, 1453
HhaI	GCGC	2 cut(s)	476, 782
Hin1I	GRCGYC	2 cut(s)	113, 1464
Hin1II	CATG	4 cut(s)	772, 822, 1187, 1427
Hin6I	GCGC	2 cut(s)	474, 780
HinP1I	GCGC	2 cut(s)	474, 780
HincII	GTYRAC	1 cut(s)	1323
HindII	GTYRAC	1 cut(s)	1323
HindIII	AAGCTT	1 cut(s)	1367
HinfI	GANTC	2 cut(s)	686, 802
HpaII	CCGG	6 cut(s)	37, 110, 418, 560, 1429, 1441
HphI	GGTGA	4 cut(s)	398, 448, 658, 1354
Hpy166II	GTNNAC	3 cut(s)	439, 845, 1323
Hpy188I	TCNGA	5 cut(s)	10, 328, 357, 976, 1374
Hpy188III	TCNNGA	4 cut(s)	77, 428, 700, 1207
Hpy8I	GTNNAC	3 cut(s)	439, 845, 1323
Hpy99I	CGWCG	3 cut(s)	118, 141, 474
HpyAV	CCTTC	3 cut(s)	40, 509, 1019
HpyCH4III	ACNGT	7 cut(s)	361, 380, 538, 697, 787, 849, 1276
HpyCH4IV	ACGT	2 cut(s)	922, 1215
HpyCH4V	TGCA	6 cut(s)	62, 340, 512, 813, 827, 845
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 110, 394, 599, 671, 1076
HpyF3I	CTNAG	2 cut(s)	659, 723
HpySE526I	ACGT	2 cut(s)	922, 1215
Hsp92I	GRCGYC	2 cut(s)	113, 1464
Hsp92II	CATG	4 cut(s)	772, 822, 1187, 1427
HspAI	GCGC	2 cut(s)	474, 780
Kzo9I	GATC	4 cut(s)	79, 597, 648, 733
LmnI	GCTCC	5 cut(s)	21, 267, 494, 584, 772
Lsp1109I	GCAGC	8 cut(s)	45, 116, 324, 372, 731, 797, 825, 1273
LweI	GCATC	2 cut(s)	324, 836
MaeI	CTAG	6 cut(s)	498, 654, 716, 858, 1092, 1394
MaeII	ACGT	2 cut(s)	922, 1215
MaeIII	GTNAC	3 cut(s)	880, 1087, 1230
MalI	GATC	4 cut(s)	81, 599, 650, 735
MboI	GATC	4 cut(s)	79, 597, 648, 733
MboII	GAAGA	6 cut(s)	52, 55, 188, 197, 995, 1112
MhlI	GDGCHC	3 cut(s)	264, 847, 984
MluCI	AATT	7 cut(s)	216, 524, 564, 704, 852, 1104, 1375
MlyI	GAGTC	2 cut(s)	680, 811
MmeI	TCCRAC	1 cut(s)	1150
Mph1103I	ATGCAT	1 cut(s)	64
MroXI	GAANNNNTTC	1 cut(s)	519
MseI	TTAA	3 cut(s)	606, 897, 1118
MspA1I	CMGCKG	1 cut(s)	581
MspI	CCGG	6 cut(s)	37, 110, 418, 560, 1429, 1441
MspR9I	CCNGG	7 cut(s)	19, 418, 419, 561, 747, 1316, 1441
Mva1269I	GAATGC	1 cut(s)	64
MvaI	CCWGG	3 cut(s)	19, 747, 1316
MvnI	CGCG	1 cut(s)	474
MwoI	GCNNNNNNNGC	6 cut(s)	30, 110, 394, 599, 671, 1076
NciI	CCSGG	4 cut(s)	418, 419, 561, 1441
NdeII	GATC	4 cut(s)	79, 597, 648, 733
NlaIII	CATG	4 cut(s)	772, 822, 1187, 1427
NlaIV	GGNNCC	4 cut(s)	618, 969, 983, 1433
NmuCI	GTSAC	1 cut(s)	1087
NsiI	ATGCAT	1 cut(s)	64
NspV	TTCGAA	1 cut(s)	1387
PctI	GAATGC	1 cut(s)	64
PdmI	GAANNNNTTC	1 cut(s)	519
PflFI	GACNNNGTC	2 cut(s)	1085, 1301
PflMI	CCANNNNNTGG	1 cut(s)	977
PfoI	TCCNGGA	1 cut(s)	559
PkrI	GCNGC	8 cut(s)	35, 106, 339, 387, 721, 812, 815, 1263
Ple19I	CGATCG	1 cut(s)	600
PleI	GAGTC	2 cut(s)	680, 810
PpsI	GAGTC	2 cut(s)	680, 810
Ppu21I	YACGTR	1 cut(s)	1216
PpuMI	RGGWCCY	2 cut(s)	292, 1303
Psp124BI	GAGCTC	1 cut(s)	264
Psp5II	RGGWCCY	2 cut(s)	292, 1303
Psp6I	CCWGG	3 cut(s)	17, 745, 1314
PspFI	CCCAGC	1 cut(s)	284
PspGI	CCWGG	3 cut(s)	17, 745, 1314
PspN4I	GGNNCC	4 cut(s)	618, 969, 983, 1433
PspPI	GGNCC	6 cut(s)	15, 292, 396, 763, 1303, 1431
PspPPI	RGGWCCY	2 cut(s)	292, 1303
PstI	CTGCAG	1 cut(s)	815
PsyI	GACNNNGTC	2 cut(s)	1085, 1301
PvuI	CGATCG	1 cut(s)	600
PvuII	CAGCTG	1 cut(s)	581
RsaI	GTAC	5 cut(s)	165, 242, 371, 793, 1214
RsaNI	GTAC	5 cut(s)	164, 241, 370, 792, 1213
SacI	GAGCTC	1 cut(s)	264
SaqAI	TTAA	3 cut(s)	606, 897, 1118
SatI	GCNGC	8 cut(s)	34, 105, 338, 386, 720, 811, 814, 1262
Sau3AI	GATC	4 cut(s)	79, 597, 648, 733
Sau96I	GGNCC	6 cut(s)	15, 292, 396, 763, 1303, 1431
ScaI	AGTACT	1 cut(s)	371
SchI	GAGTC	2 cut(s)	680, 811
ScrFI	CCNGG	7 cut(s)	19, 418, 419, 561, 747, 1316, 1441
SduI	GDGCHC	3 cut(s)	264, 847, 984
SfaNI	GCATC	2 cut(s)	324, 836
SfcI	CTRYAG	2 cut(s)	310, 811
SfuI	TTCGAA	1 cut(s)	1387
SgrAI	CRCCGGYG	1 cut(s)	109
SinI	GGWCC	4 cut(s)	15, 292, 1303, 1431
SmaI	CCCGGG	1 cut(s)	419
SmiI	ATTTAAAT	1 cut(s)	1119
SmlI	CTYRAG	3 cut(s)	296, 428, 1205
SmoI	CTYRAG	3 cut(s)	296, 428, 1205
SrfI	GCCCGGGC	1 cut(s)	419
Sse9I	AATT	7 cut(s)	216, 524, 564, 704, 852, 1104, 1375
SsiI	CCGC	2 cut(s)	253, 1410
SspI	AATATT	2 cut(s)	954, 1115
SspMI	CTAG	6 cut(s)	498, 654, 716, 858, 1092, 1394
SstI	GAGCTC	1 cut(s)	264
StyD4I	CCNGG	7 cut(s)	17, 416, 417, 559, 745, 1314, 1439
StyI	CCWWGG	2 cut(s)	150, 1280
SwaI	ATTTAAAT	1 cut(s)	1119
TaaI	ACNGT	7 cut(s)	361, 380, 538, 697, 787, 849, 1276
TaiI	ACGT	2 cut(s)	925, 1218
TaqI	TCGA	4 cut(s)	174, 596, 1364, 1387
TasI	AATT	7 cut(s)	216, 524, 564, 704, 852, 1104, 1375
TatI	WGTACW	2 cut(s)	163, 369
Tru1I	TTAA	3 cut(s)	606, 897, 1118
Tru9I	TTAA	3 cut(s)	606, 897, 1118
TscAI	CASTG	2 cut(s)	852, 879
TseFI	GTSAC	1 cut(s)	1087
TseI	GCWGC	8 cut(s)	33, 104, 337, 385, 719, 810, 813, 1261
Tsp45I	GTSAC	1 cut(s)	1087
TspDTI	ATGAA	1 cut(s)	1038
TspMI	CCCGGG	1 cut(s)	417
TspRI	CASTG	2 cut(s)	852, 879
Tth111I	GACNNNGTC	2 cut(s)	1085, 1301
Van91I	CCANNNNNTGG	1 cut(s)	977
VneI	GTGCAC	1 cut(s)	843
VpaK11BI	GGWCC	4 cut(s)	15, 292, 1303, 1431
XagI	CCTNNNNNAGG	2 cut(s)	828, 1023
XapI	RAATTY	2 cut(s)	704, 1375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	992
XmaI	CCCGGG	1 cut(s)	417
XmnI	GAANNNNTTC	1 cut(s)	519
XspI	CTAG	6 cut(s)	498, 654, 716, 858, 1092, 1394
ZrmI	AGTACT	1 cut(s)	371
Zsp2I	ATGCAT	1 cut(s)	64

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.