FvH4_3g31890

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
26847945 .. 26853359
5415 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g31890.t2

Sequence Viewer

Length: 2805 bp
ATGATGGGAGGACTTGATCGAAATACGAATACGAGAAGTAGGGATTACTTGGAAGGAATGCTGAGTGATTATGTTGGAGGAAAAGGCAAGGGGAAGCCTCAGAAGAGCACTTCTGCTAGGCTTGTCACAGCTCTCACTTGTCTGCAATTTGCCTTTGCAGTTTATGCAACATTCCTTCTCTACTATATGAGCCCCTCCATCGATTTACGAACCAAACCAGACTTCACATGGGCTACCAAGATTGCACAGCAATGGAAACAGTACATTATCCCACCGCACATCATTGGCCACTATCAGGATTCTGCTTCTCTTGTGAGATTGGCCGAAATCCAACCCATCACTCCCTCTGAGGTCTGCGAGCACGAAAAGATTGATTTCGAGCAGAAGAAGTCCAGTGATGCTCAGATGATCAAGCTGAAGACAGAGCTTTACCATGAAGTATTGGACTTCCAAAGCAAGAACATTGGTACTGAAACTCTTGCTCAGCTGATGGCAATGAAGTCCAAGTGGGATTTGAAAGGTCCCAACAGACCAAAAGTCACAGTGATCTTGAACCACTTCAAGAGAAAAACACTGTGTGCTCAGCTTGATACCTTGCTCCAACAAACCCTTCCTTTCCACCATGTTTGGGTTCTTTCTTTTGGGAGTCCAAATGAGCTCTCTTTGAAGAGAATCGTGGACAGCTACAATGATTCAAGAATAAGCTTCATAAGTTCAAGCTATGACTTCAAGTACTATGGAAGGTTCCAAATGGCTTTGCAAACCGAAGCCGATCTTGTGTACATTGTTGATGATGACATGATTCCTGGGAAGAGAATGTTGCAGATTTTGTCACATGTAGCCGGAACGGAGAAGTACAAGAACTCTGTTTTGGGCAGCATAGGGAGGATTTTGCCATTTAGACAAAAGGACTTCACTTTTCCAAGCTATAGAAAGTTCAGGTCTAAGGAGGCAGGACTTTATTTACCTGACCCTGCCTATGATATCACTCTGGATAAAATTGTGCAGGTGGACTTCCTTTCCAGTTCTTGGTTCTTATCTGCAGAGCTGATTAAAACACTTTTCATTGAGACACCCTTCACATTTTCGACCGGCGAAGATCTGCACCTTAGTTATCAGCTTCAAAAGTACAGAAATGCTGGCTCATTTGTTCTTCCAGTTGACCCAAAGGATAAGGAAACTTGGGGAGACAGTGAACATAGGCTTGCTTATGTATCTGAAACCACTGTAATTTTCAAAGACATTGTTCAAGTCCGAGACGATCAATGGTGGAAAGCACTATCTACTGGTTATATCACTCAGTGGGCTGCAATGCATCCTCAAAAAATTGATGCCCTTTTCTATGCTCATTCTGTTGATGAAGTTAAAGCACTTGCACCCCTTCTTGCGAAATTCAGGTCCACTGTTGGAAAGAAAGTTTACATTGCCGTCTCTGGAGGCAATTTCTGCCCTTGTGAAGATGCAGCTACTGCACTGAGGTGGCCTAAGTTGGTATGCAATGAGAGGAGGTTTAAAATCTTTGATTTGGCTGTGGGTGCTCTTTCGGATATATCAAACTCCGAGGTGGTAGTGCTGCAAGGAGTGTATGCTAGCATGAAAGGCTTGATCAAAATTCACAACCCGAGTGTAGTGATCGCAGTCGCTGATATTGATCCTAATGTGAAGAAAACTTTGAAAATGGCCACAGATACTAATGGGAAGGGTACAACATTGGTTCTTTTACCAAGGTCTTCAGTATCGAAAGTTCTTTGGATGGCTGATCTTCGAACAACAGCATTGCCAAATTGGAACAGAATGCGGATTTCTGTCAACATTATCACCCAAAACCGGGTGCATTCCCTTACAAGGCTTCTCAAATCTCTCAGTGATGCATACTATCTTGGGGACGAGGTACCCATCAGCTTCAACATGGACAGCAAAGTTGATGAAGCAACTATTAGATTAGTAAGCTCATTTGAGTGGCCTCATGGCCCTAAAACTCTCAAGAGGAGGATCATACAAGGAGGACTTATTCGAGCTGTCAGTGAGAGTTGGTACCCTTCATCTGATGATGATTTTGGTCTGCTACTCGAAGATGATATCGAAGTCTCACCTTACTACTACCTATGGATCAAATATGCCCTCTTAGCTTACCACTATAATCCTCAAGTCTCTCTCCCCGAGTTGTCCTCAATCTCTCTCTACACCCCTAGGATAGTTGAGGTGGTGAAAGAAAGGCCTAAATGGAACCCAACAGAGTTTTTCAAGAACATGCATCCAAACACACCTTATTTCCACCAGTTACCATGCAGTTGGGGAGCAGTCTTCTTCCCCAAGCAATGGAGAGAGTTCTATGTCTATATGAATATGAGGTTCACCGAAGATGCCAAGAAAAACCCAGTTCAAATTCCAAAGTCCAGGACTAATGGTTGGCAAGCATCATGGAAAAAGTTCCTCATAGACATGATGTACCTTAGAGGATATGTGAGTCTTTATCCAAACTTTCCAAACCAAGCAAGCTTTTCCACAAACCATATGGAACCCGGGGCTCATATTAGCGCCAAGGACAATGTTGTGAAGCATGACAAGTCAGATTTTGAAGTGCCATTGTTGAAGGAAGACTTCCGAAATTTCTTGCCAGGTGGTAAATTGCCTCCGGCCTCAAGATTGCCATCTTTAAACCTCTTCAACATGCCGGTTTCCCTTAAAGGCTTAAAGGCAGCTGGAGCCAAGTTGGGGCAGGATGTGATTGGATGCAACAATACCACAGAGATTGTCATGGTTGACCATCAAACTGGTCTACCAGCACGCTGTGCCAGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

935

Amino Acids

106.5

Weight (kDa)

9.09

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013531)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60700 AT5G60700
fragaria_vesca FvH4_3g31890 FvH4_3g31890
malus_domestica MD03G1120400.v1.1 MD11G1138800.v1.1
prunus_persica Prupe.6G103800_v2.0.a1
pyrus_communis pycom11g11450
rosa_chinensis RchiOBHm_Chr5g0058661
rosa_laevigata RLG00000035238
rosa_multiflora Rmu_sc0000367.1_g000205
rosa_roxburghii Rroxscaffold_1G00021760
rosa_rugosa Rorug05G0317100
rosa_samantha Rh5AG382800 Rh5BG394700 Rh5CG418500 Rh5DG410100
rosa_wichuraiana Rw5G036070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 997
Acc36I ACCTGC 1 cut(s) 997
Acc65I GGTACC 2 cut(s) 1891, 2034
AccB1I GGYRCC 2 cut(s) 1891, 2034
AccB7I CCANNNNNTGG 2 cut(s) 1029, 2319
AccI GTMKAC 1 cut(s) 2779
AciI CCGC 2 cut(s) 275, 1798
AclWI GGATC 3 cut(s) 1646, 2000, 2117
AcoI YGGCCR 3 cut(s) 286, 321, 1680
AcsI RAATTY 4 cut(s) 1391, 1611, 2385, 2608
AcuI CTGAAG 2 cut(s) 437, 1716
AdeI CACNNNGTG 3 cut(s) 578, 1302, 2792
AfiI CCNNNNNNNGG 8 cut(s) 295, 628, 1029, 1827, 1828, 1845, 2319, 2715
AflIII ACRYGT 1 cut(s) 835
AhdI GACNNNNNGTC 1 cut(s) 536
AjnI CCWGG 4 cut(s) 805, 2396, 2617, 2795
AjuI GAANNNNNNNTTGG 6 cut(s) 206, 238, 594, 626, 854, 886
AleI CACNNNNGTG 1 cut(s) 1477
Alw21I GWGCWC 5 cut(s) 110, 363, 583, 660, 1540
Alw26I GTCTC 6 cut(s) 1064, 1182, 1251, 1435, 2092, 2155
AlwI GGATC 3 cut(s) 1646, 2000, 2117
AlwNI CAGNNNCTG 3 cut(s) 1469, 1643, 2802
Ama87I CYCGRG 3 cut(s) 1621, 2159, 2522
AoxI GGCC 8 cut(s) 286, 321, 1481, 1680, 1961, 1969, 2216, 2637
ApeKI GCWGC 5 cut(s) 876, 1307, 1463, 1573, 2699
ApoI RAATTY 4 cut(s) 1391, 1611, 2385, 2608
ArsI GACNNNNNNTTYG 2 cut(s) 1382, 1414
Asp700I GAANNNNTTC 2 cut(s) 557, 2429
Asp718I GGTACC 2 cut(s) 1891, 2034
AspA2I CCTAGG 1 cut(s) 2189
AspLEI GCGC 1 cut(s) 2540
AspS9I GGNCC 3 cut(s) 521, 1398, 1970
AsuC2I CCSGG 3 cut(s) 1829, 2523, 2524
AsuHPI GGTGA 4 cut(s) 1810, 2082, 2218, 2347
AsuII TTCGAA 1 cut(s) 1765
AsuNHI GCTAGC 1 cut(s) 1589
AvaI CYCGRG 3 cut(s) 1621, 2159, 2522
AvaII GGWCC 2 cut(s) 521, 1398
AvrII CCTAGG 1 cut(s) 2189
BalI TGGCCA 2 cut(s) 288, 1682
BanI GGYRCC 2 cut(s) 1891, 2034
BanII GRGCYC 3 cut(s) 194, 660, 2530
BbsI GAAGAC 4 cut(s) 425, 1722, 2296, 2604
Bbv12I GWGCWC 5 cut(s) 110, 363, 583, 660, 1540
BbvI GCAGC 5 cut(s) 888, 1294, 1475, 1560, 2711
BccI CCATC 7 cut(s) 206, 344, 484, 1747, 1904, 2659, 2775
BceAI ACGGC 1 cut(s) 1412
BciT130I CCWGG 4 cut(s) 807, 2398, 2619, 2797
BclI TGATCA 2 cut(s) 408, 1605
BcnI CCSGG 3 cut(s) 1829, 2523, 2524
BcoDI GTCTC 6 cut(s) 1064, 1182, 1251, 1435, 2092, 2155
BfaI CTAG 3 cut(s) 117, 1590, 2190
BfmI CTRYAG 2 cut(s) 928, 1041
BfoI RGCGCY 1 cut(s) 2541
BfuAI ACCTGC 1 cut(s) 997
BglII AGATCT 1 cut(s) 1099
BisI GCNGC 5 cut(s) 877, 1308, 1464, 1574, 2700
BlnI CCTAGG 1 cut(s) 2189
BlpI GCTNAGC 2 cut(s) 483, 582
BlsI GCNGC 5 cut(s) 878, 1309, 1465, 1575, 2701
BmcAI AGTACT 1 cut(s) 734
Bme1390I CCNGG 7 cut(s) 807, 1829, 2398, 2523, 2524, 2619, 2797
Bme18I GGWCC 2 cut(s) 521, 1398
BmeRI GACNNNNNGTC 1 cut(s) 536
BmeT110I CYCGRG 3 cut(s) 1621, 2159, 2522
BmgT120I GGNCC 3 cut(s) 521, 1398, 1970
BmiI GGNNCC 7 cut(s) 523, 746, 1893, 2036, 2228, 2520, 2707
BmrFI CCNGG 7 cut(s) 807, 1829, 2398, 2523, 2524, 2619, 2797
BmrI ACTGGG 1 cut(s) 2372
BmsI GCATC 9 cut(s) 388, 1321, 1324, 1450, 1858, 2263, 2353, 2426, 2723
BmtI GCTAGC 1 cut(s) 1593
BmuI ACTGGG 1 cut(s) 2372
BpiI GAAGAC 4 cut(s) 425, 1722, 2296, 2604
BplI GAGNNNNNCTC 2 cut(s) 2153, 2185
BpmI CTGGAG 2 cut(s) 1455, 2724
Bpu1102I GCTNAGC 2 cut(s) 483, 582
Bpu14I TTCGAA 1 cut(s) 1765
BpuEI CTTGAG 3 cut(s) 1967, 2130, 2626
BpuMI CCSGG 3 cut(s) 1829, 2523, 2524
Bsa29I ATCGAT 1 cut(s) 201
BsaBI GATNNNNATC 2 cut(s) 1650, 2650
BsaJI CCNNGG 7 cut(s) 806, 1560, 1724, 2189, 2522, 2523, 2541
Bsc4I CCNNNNNNNGG 8 cut(s) 295, 628, 1029, 1827, 1828, 1845, 2319, 2715
Bse118I RCCGGY 2 cut(s) 1091, 2674
Bse1I ACTGG 7 cut(s) 393, 1023, 1157, 1291, 2278, 2378, 2779
Bse3DI GCAATG 7 cut(s) 257, 501, 1317, 1422, 1504, 1775, 2324
Bse8I GATNNNNATC 2 cut(s) 1650, 2650
BseBI CCWGG 4 cut(s) 807, 2398, 2619, 2797
BseCI ATCGAT 1 cut(s) 201
BseDI CCNNGG 7 cut(s) 806, 1560, 1724, 2189, 2522, 2523, 2541
BseGI GGATG 5 cut(s) 1315, 1758, 2254, 2728, 2738
BseJI GATNNNNATC 2 cut(s) 1650, 2650
BseLI CCNNNNNNNGG 8 cut(s) 295, 628, 1029, 1827, 1828, 1845, 2319, 2715
BseMI GCAATG 7 cut(s) 257, 501, 1317, 1422, 1504, 1775, 2324
BseMII CTCAG 9 cut(s) 53, 113, 339, 416, 497, 596, 1313, 1466, 1876
BseNI ACTGG 7 cut(s) 393, 1023, 1157, 1291, 2278, 2378, 2779
BseRI GAGGAG 2 cut(s) 1519, 2002
BseXI GCAGC 5 cut(s) 888, 1294, 1475, 1560, 2711
BsgI GTGCAG 3 cut(s) 1025, 1088, 1455
Bsh1285I CGRYCG 1 cut(s) 1092
BshFI GGCC 8 cut(s) 288, 323, 1483, 1682, 1963, 1971, 2218, 2639
BshNI GGYRCC 2 cut(s) 1891, 2034
BshVI ATCGAT 1 cut(s) 201
BsiEI CGRYCG 1 cut(s) 1092
BsiHKAI GWGCWC 5 cut(s) 110, 363, 583, 660, 1540
BsiHKCI CYCGRG 3 cut(s) 1621, 2159, 2522
BsiSI CCGG 6 cut(s) 843, 1092, 1828, 2523, 2636, 2675
BslFI GGGAC 2 cut(s) 507, 1898
BslI CCNNNNNNNGG 8 cut(s) 295, 628, 1029, 1827, 1828, 1845, 2319, 2715
BsmAI GTCTC 6 cut(s) 1064, 1182, 1251, 1435, 2092, 2155
BsmBI CGTCTC 2 cut(s) 1251, 1435
BsmFI GGGAC 2 cut(s) 507, 1898
BsmI GAATGC 3 cut(s) 63, 1800, 1834
BsnI GGCC 8 cut(s) 288, 323, 1483, 1682, 1963, 1971, 2218, 2639
BsoBI CYCGRG 3 cut(s) 1621, 2159, 2522
Bsp119I TTCGAA 1 cut(s) 1765
Bsp1286I GDGCHC 7 cut(s) 110, 194, 363, 583, 660, 1540, 2530
Bsp1407I TGTACA 1 cut(s) 780
Bsp1720I GCTNAGC 2 cut(s) 483, 582
BspACI CCGC 2 cut(s) 275, 1798
BspANI GGCC 8 cut(s) 288, 323, 1483, 1682, 1963, 1971, 2218, 2639
BspCNI CTCAG 9 cut(s) 54, 112, 340, 415, 496, 595, 1312, 1467, 1875
BspDI ATCGAT 1 cut(s) 201
BspLI GGNNCC 7 cut(s) 523, 746, 1893, 2036, 2228, 2520, 2707
BspMAI CTGCAG 1 cut(s) 1045
BspMI ACCTGC 1 cut(s) 997
BspOI GCTAGC 1 cut(s) 1593
BspPI GGATC 3 cut(s) 1646, 2000, 2117
BspQI GCTCTTC 1 cut(s) 98
BspT104I TTCGAA 1 cut(s) 1765
BspT107I GGYRCC 2 cut(s) 1891, 2034
BsrDI GCAATG 7 cut(s) 257, 501, 1317, 1422, 1504, 1775, 2324
BsrFI RCCGGY 2 cut(s) 1091, 2674
BsrGI TGTACA 1 cut(s) 780
BsrI ACTGG 7 cut(s) 393, 1023, 1157, 1291, 2278, 2378, 2779
BssAI RCCGGY 2 cut(s) 1091, 2674
BssECI CCNNGG 7 cut(s) 806, 1560, 1724, 2189, 2522, 2523, 2541
BssT1I CCWWGG 3 cut(s) 1724, 2189, 2541
Bst2UI CCWGG 4 cut(s) 807, 2398, 2619, 2797
Bst4CI ACNGT 6 cut(s) 261, 544, 576, 1193, 1228, 1405
Bst6I CTCTTC 4 cut(s) 98, 662, 806, 2669
BstAPI GCANNNNNTGC 4 cut(s) 164, 1446, 1469, 2792
BstAUI TGTACA 1 cut(s) 780
BstBI TTCGAA 1 cut(s) 1765
BstC8I GCNNGC 7 cut(s) 359, 1141, 1206, 1591, 2415, 2497, 2788
BstF5I GGATG 5 cut(s) 1315, 1758, 2254, 2728, 2738
BstH2I RGCGCY 1 cut(s) 2541
BstHHI GCGC 1 cut(s) 2540
BstMAI GTCTC 6 cut(s) 1064, 1182, 1251, 1435, 2092, 2155
BstMCI CGRYCG 1 cut(s) 1092
BstMWI GCNNNNNNNGC 8 cut(s) 164, 1446, 1469, 1535, 1599, 2126, 2705, 2792
BstNI CCWGG 4 cut(s) 807, 2398, 2619, 2797
BstNSI RCATGY 3 cut(s) 839, 2254, 2674
BstSCI CCNGG 7 cut(s) 805, 1827, 2396, 2521, 2522, 2617, 2795
BstSFI CTRYAG 2 cut(s) 928, 1041
BstV1I GCAGC 5 cut(s) 888, 1294, 1475, 1560, 2711
BstV2I GAAGAC 4 cut(s) 425, 1722, 2296, 2604
BstX2I RGATCY 1 cut(s) 1099
BstXI CCANNNNNNTGG 2 cut(s) 2292, 2774
BstYI RGATCY 1 cut(s) 1099
Bsu15I ATCGAT 1 cut(s) 201
BsuRI GGCC 8 cut(s) 288, 323, 1483, 1682, 1963, 1971, 2218, 2639
BsuTUI ATCGAT 1 cut(s) 201
BtsCI GGATG 5 cut(s) 1315, 1758, 2254, 2728, 2738
BveI ACCTGC 1 cut(s) 997
Cac8I GCNNGC 7 cut(s) 359, 1141, 1206, 1591, 2415, 2497, 2788
CaiI CAGNNNCTG 3 cut(s) 1469, 1643, 2802
CfoI GCGC 1 cut(s) 2540
Cfr10I RCCGGY 2 cut(s) 1091, 2674
Cfr13I GGNCC 3 cut(s) 521, 1398, 1970
Cfr9I CCCGGG 1 cut(s) 2522
ClaI ATCGAT 1 cut(s) 201
CspCI CAANNNNNGTGG 4 cut(s) 608, 643, 2734, 2769
DraI TTTAAA 2 cut(s) 1513, 2658
DraIII CACNNNGTG 3 cut(s) 578, 1302, 2792
DriI GACNNNNNGTC 1 cut(s) 536
EaeI YGGCCR 3 cut(s) 286, 321, 1680
Eam1104I CTCTTC 4 cut(s) 98, 662, 806, 2669
Eam1105I GACNNNNNGTC 1 cut(s) 536
EarI CTCTTC 4 cut(s) 98, 662, 806, 2669
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 3 cut(s) 1724, 2189, 2541
Eco147I AGGCCT 1 cut(s) 2218
Eco24I GRGCYC 3 cut(s) 194, 660, 2530
Eco32I GATATC 2 cut(s) 985, 2080
Eco47I GGWCC 2 cut(s) 521, 1398
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 2 cut(s) 437, 1716
Eco88I CYCGRG 3 cut(s) 1621, 2159, 2522
EcoICRI GAGCTC 1 cut(s) 658
EcoO109I RGGNCCY 1 cut(s) 521
EcoRII CCWGG 4 cut(s) 805, 2396, 2617, 2795
EcoRV GATATC 2 cut(s) 985, 2080
EcoT14I CCWWGG 3 cut(s) 1724, 2189, 2541
EcoT22I ATGCAT 3 cut(s) 1317, 1873, 2256
EcoT38I GRGCYC 3 cut(s) 194, 660, 2530
ErhI CCWWGG 3 cut(s) 1724, 2189, 2541
Esp3I CGTCTC 2 cut(s) 1251, 1435
FalI AAGNNNNNCTT 6 cut(s) 759, 791, 1992, 2024, 2585, 2617
FaqI GGGAC 2 cut(s) 507, 1898
FauNDI CATATG 1 cut(s) 2514
FbaI TGATCA 2 cut(s) 408, 1605
FblI GTMKAC 1 cut(s) 2779
Fnu4HI GCNGC 5 cut(s) 877, 1308, 1464, 1574, 2700
FokI GGATG 5 cut(s) 1302, 1765, 2241, 2735, 2745
FriOI GRGCYC 3 cut(s) 194, 660, 2530
Fsp4HI GCNGC 5 cut(s) 877, 1308, 1464, 1574, 2700
FspBI CTAG 3 cut(s) 117, 1590, 2190
GlaI GCGC 1 cut(s) 2539
GluI GCNGC 5 cut(s) 877, 1308, 1464, 1574, 2700
GsuI CTGGAG 2 cut(s) 1455, 2724
HaeII RGCGCY 1 cut(s) 2541
HaeIII GGCC 8 cut(s) 288, 323, 1483, 1682, 1963, 1971, 2218, 2639
HapII CCGG 6 cut(s) 843, 1092, 1828, 2523, 2636, 2675
HhaI GCGC 1 cut(s) 2540
Hin6I GCGC 1 cut(s) 2538
HinP1I GCGC 1 cut(s) 2538
HincII GTYRAC 3 cut(s) 1162, 1810, 2764
HindII GTYRAC 3 cut(s) 1162, 1810, 2764
HindIII AAGCTT 2 cut(s) 703, 2497
HinfI GANTC 6 cut(s) 299, 646, 672, 692, 802, 2467
HpaII CCGG 6 cut(s) 843, 1092, 1828, 2523, 2636, 2675
HphI GGTGA 4 cut(s) 1810, 2082, 2218, 2347
Hpy188III TCNNGA 9 cut(s) 296, 550, 562, 696, 992, 1434, 1984, 2245, 2643
HpyAV CCTTC 9 cut(s) 47, 185, 620, 735, 1087, 1391, 1693, 2049, 2587
HpyCH4III ACNGT 6 cut(s) 261, 544, 576, 1193, 1228, 1405
HpyF10VI GCNNNNNNNGC 8 cut(s) 164, 1446, 1469, 1535, 1599, 2126, 2705, 2792
HspAI GCGC 1 cut(s) 2538
KpnI GGTACC 2 cut(s) 1895, 2038
Ksp22I TGATCA 2 cut(s) 408, 1605
LguI GCTCTTC 1 cut(s) 98
LmnI GCTCC 3 cut(s) 603, 2297, 2705
Lsp1109I GCAGC 5 cut(s) 888, 1294, 1475, 1560, 2711
LweI GCATC 9 cut(s) 388, 1321, 1324, 1450, 1858, 2263, 2353, 2426, 2723
MaeI CTAG 3 cut(s) 117, 1590, 2190
MaeIII GTNAC 4 cut(s) 124, 538, 831, 2280
MflI RGATCY 1 cut(s) 1099
MhlI GDGCHC 7 cut(s) 110, 194, 363, 583, 660, 1540, 2530
MlsI TGGCCA 2 cut(s) 288, 1682
MluNI TGGCCA 2 cut(s) 288, 1682
MlyI GAGTC 2 cut(s) 655, 2476
MmeI TCCRAC 4 cut(s) 55, 355, 625, 1387
Mox20I TGGCCA 2 cut(s) 288, 1682
Mph1103I ATGCAT 3 cut(s) 1317, 1873, 2256
MroXI GAANNNNTTC 2 cut(s) 557, 2429
MscI TGGCCA 2 cut(s) 288, 1682
MseI TTAA 6 cut(s) 1053, 1365, 1512, 2657, 2685, 2693
MslI CAYNNNNRTG 4 cut(s) 250, 1477, 1957, 2441
Msp20I TGGCCA 2 cut(s) 288, 1682
MspA1I CMGCKG 2 cut(s) 487, 2702
MspI CCGG 6 cut(s) 843, 1092, 1828, 2523, 2636, 2675
MspR9I CCNGG 7 cut(s) 807, 1829, 2398, 2523, 2524, 2619, 2797
Mva1269I GAATGC 3 cut(s) 63, 1800, 1834
MvaI CCWGG 4 cut(s) 807, 2398, 2619, 2797
MwoI GCNNNNNNNGC 8 cut(s) 164, 1446, 1469, 1535, 1599, 2126, 2705, 2792
NciI CCSGG 3 cut(s) 1829, 2523, 2524
NdeI CATATG 1 cut(s) 2514
NheI GCTAGC 1 cut(s) 1589
NlaIV GGNNCC 7 cut(s) 523, 746, 1893, 2036, 2228, 2520, 2707
NmuCI GTSAC 3 cut(s) 124, 538, 831
NsiI ATGCAT 3 cut(s) 1317, 1873, 2256
NspI RCATGY 3 cut(s) 839, 2254, 2674
NspV TTCGAA 1 cut(s) 1765
OliI CACNNNNGTG 1 cut(s) 1477
PaqCI CACCTGC 1 cut(s) 997
PceI AGGCCT 1 cut(s) 2218
PciI ACATGT 1 cut(s) 835
PciSI GCTCTTC 1 cut(s) 98
PctI GAATGC 3 cut(s) 63, 1800, 1834
PdmI GAANNNNTTC 2 cut(s) 557, 2429
PfeI GAWTC 4 cut(s) 299, 672, 692, 802
PflMI CCANNNNNTGG 2 cut(s) 1029, 2319
PfoI TCCNGGA 1 cut(s) 2396
PkrI GCNGC 5 cut(s) 878, 1309, 1465, 1575, 2701
PleI GAGTC 2 cut(s) 654, 2475
PpsI GAGTC 2 cut(s) 654, 2475
PpuMI RGGWCCY 1 cut(s) 521
PscI ACATGT 1 cut(s) 835
Psp124BI GAGCTC 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 521
Psp6I CCWGG 4 cut(s) 805, 2396, 2617, 2795
PspGI CCWGG 4 cut(s) 805, 2396, 2617, 2795
PspN4I GGNNCC 7 cut(s) 523, 746, 1893, 2036, 2228, 2520, 2707
PspPI GGNCC 3 cut(s) 521, 1398, 1970
PspPPI RGGWCCY 1 cut(s) 521
PsrI GAACNNNNNNTAC 2 cut(s) 1728, 1760
PstI CTGCAG 1 cut(s) 1045
PstNI CAGNNNCTG 3 cut(s) 1469, 1643, 2802
PsuI RGATCY 1 cut(s) 1099
PvuII CAGCTG 2 cut(s) 487, 2702
RseI CAYNNNNRTG 4 cut(s) 250, 1477, 1957, 2441
SacI GAGCTC 1 cut(s) 660
SapI GCTCTTC 1 cut(s) 98
SaqAI TTAA 6 cut(s) 1053, 1365, 1512, 2657, 2685, 2693
SatI GCNGC 5 cut(s) 877, 1308, 1464, 1574, 2700
Sau96I GGNCC 3 cut(s) 521, 1398, 1970
ScaI AGTACT 1 cut(s) 734
SchI GAGTC 2 cut(s) 655, 2476
ScrFI CCNGG 7 cut(s) 807, 1829, 2398, 2523, 2524, 2619, 2797
SduI GDGCHC 7 cut(s) 110, 194, 363, 583, 660, 1540, 2530
SfaNI GCATC 9 cut(s) 388, 1321, 1324, 1450, 1858, 2263, 2353, 2426, 2723
SfcI CTRYAG 2 cut(s) 928, 1041
SfuI TTCGAA 1 cut(s) 1765
SinI GGWCC 2 cut(s) 521, 1398
SmaI CCCGGG 1 cut(s) 2524
SmiMI CAYNNNNRTG 4 cut(s) 250, 1477, 1957, 2441
SmlI CTYRAG 3 cut(s) 1982, 2145, 2641
SmoI CTYRAG 3 cut(s) 1982, 2145, 2641
SseBI AGGCCT 1 cut(s) 2218
SsiI CCGC 2 cut(s) 275, 1798
SspMI CTAG 3 cut(s) 117, 1590, 2190
SstI GAGCTC 1 cut(s) 660
StuI AGGCCT 1 cut(s) 2218
StyD4I CCNGG 7 cut(s) 805, 1827, 2396, 2521, 2522, 2617, 2795
StyI CCWWGG 3 cut(s) 1724, 2189, 2541
TaaI ACNGT 6 cut(s) 261, 544, 576, 1193, 1228, 1405
TaqI TCGA 9 cut(s) 19, 201, 378, 1088, 1739, 1765, 2014, 2070, 2082
TatI WGTACW 5 cut(s) 261, 732, 780, 855, 1128
TfiI GAWTC 4 cut(s) 299, 672, 692, 802
Tru1I TTAA 6 cut(s) 1053, 1365, 1512, 2657, 2685, 2693
Tru9I TTAA 6 cut(s) 1053, 1365, 1512, 2657, 2685, 2693
TseFI GTSAC 3 cut(s) 124, 538, 831
TseI GCWGC 5 cut(s) 876, 1307, 1463, 1573, 2699
Tsp45I GTSAC 3 cut(s) 124, 538, 831
TspDTI ATGAA 9 cut(s) 450, 512, 697, 1054, 1374, 1610, 1941, 2031, 2357
TspGWI ACGGA 1 cut(s) 863
TspMI CCCGGG 1 cut(s) 2522
Van91I CCANNNNNTGG 2 cut(s) 1029, 2319
VpaK11BI GGWCC 2 cut(s) 521, 1398
XapI RAATTY 4 cut(s) 1391, 1611, 2385, 2608
XceI RCATGY 3 cut(s) 839, 2254, 2674
XcmI CCANNNNNNNNNTGG 2 cut(s) 225, 2512
XmaI CCCGGG 1 cut(s) 2522
XmaJI CCTAGG 1 cut(s) 2189
XmiI GTMKAC 1 cut(s) 2779
XmnI GAANNNNTTC 2 cut(s) 557, 2429
XspI CTAG 3 cut(s) 117, 1590, 2190
ZrmI AGTACT 1 cut(s) 734
Zsp2I ATGCAT 3 cut(s) 1317, 1873, 2256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.