FvH4_3g32700

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0017273
Physical Location & Seq
Reverse (-)
27988573 .. 27991299
2727 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g32700.t1

Sequence Viewer

Length: 1494 bp
ATGATGTCATCTGAAGATGGGCTTTCAGTTCCCTCGACCATTGGTGGAGGGTTTCTTCTCCAGGAGTCAAATCCGAGCCCTAACCCTAACCCTAATACGATTAATCCGGCCCTCAAGAGGAAGCGAAATTTACCCGGAACTCCAGATCCAGATGCAGAAGTTATAGCTTTGTCCCCAAAATCTCTAATGGCCACAAACCGATTCCTCTGCGAAATCTGCAACAAGGGCTTCCAGAGGGACCAGAACTTGCAACTTCACCGACGCGGCCACAACCTTCCATGGAAGCTGAAACAAAGATCGAAGCTCGAAGTGATTCGAAAGAAGGTCTACGTCTGCCCGGAGAAGAGCTGCGTGCATCACGAGCCTTCACGGGCACTCGGAGACCTGACCGGAATCAAGAAGCACTTCAGCAGAAAGCACGGTGAGAAAAAGTGGAAGTGTGAGAAGTGCTCGAAGAAGTACGCAGTCCAGTCAGATTGGAAAGCACATAGCAAGATTTGCGGGACTAGAGAGTATAGATGTGACTGTGGCACACTCTTTTCCAGGAAAGATAGCTTCATAACTCATAGAGCTTTCTGTGATGCATTGGCGGCAGAAGAAAGCGCAAGGTTTGGTTCTACTTCAACAGCCACCAACATTAACATTCCGAGCTTCATGAATGGATCTATTACCTCTAATCAACCTCATCATCATCAACAACAGCAACAAGCGAGGAACATCCCCCAATTCTTACCAATCTTCCAACATCAGCAGCAGCCCGAATTCCCGGGCTCAGATCACCTCTCTGCAGCAAATCTAGGCTTGTCTGAAATGGTGCAGCCGGCGTCGTCGTCAATGGATATGTTTGGACCCTCTTCCTCACAGAACCAGTGGCTCAACAAGTTCCCCGAGGCATCGTTTACGAATGGGAATCTCTCTGTGTCGTCATTGATGACACGAGGACTCAAGGAGGAGGAAGACTCCAAAGCAAATTTAAATTTGTCCGGAACGATGAGTTCGGGCTCTTTCTATAACAATAATCAGAGTCCGGGTCACATGTCAGCCACAGCACTCTTGCAAAAAGCAGCTCAAATGGGATCTACAACAAGCAACAACAACGACGTCGACATTCCGGCTGCCTTCGGCTTCATGAACTCTTCACCGTACAGCCACAACAAGAACAATGAGAACTTCAATGTCTTGCTCAACTCTCTATCTTCTTCAACTCAAATGGGAGACGGGTCTCCGTCATTGTTTTCGACTTCATTCCTGAGCAACAAGATTAATCATCTGAATCAGATGATGAACCTGCCTCTAGGAACTGGTAGTTCTACTTCTAGAGTGAATGAGACCGAGAAGAGTAGCTTAACGAGGGATTTTCTCGGAGTAGGTGGAGTTAATGGTGTAACCTTCTTTCAACAAGAGCTAGGTGCAGCAAGTTTAGCTTCAATGGGTTCAGCTATGGATCACTTGACCCAGTACAGTAGCAGTACTAGTGGTGCTACTCAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz

Protein Analysis

498

Amino Acids

54.4

Weight (kDa)

8.99

Isoelectric Point (pI)

50.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 106 - 140 5.6e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 144 - 168 9e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 171 - 209 1.4e-21 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017273)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32700
malus_domestica MD03G1114800.v1.1 MD11G1133100.v1.1
prunus_persica Prupe.6G098800_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0059771
rosa_laevigata RLG00000035327
rosa_roxburghii Rroxscaffold_1G00020810
rosa_rugosa Rorug05G0325000
rosa_samantha Rh5AG390400 Rh5BG401800 Rh5CG425900 Rh5DG418200
rosa_wichuraiana Rw5G036720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1104
Acc36I ACCTGC 1 cut(s) 1296
AccI GTMKAC 2 cut(s) 327, 1104
AccII CGCG 1 cut(s) 264
AccIII TCCGGA 1 cut(s) 983
AciI CCGC 3 cut(s) 264, 501, 590
AclWI GGATC 4 cut(s) 140, 670, 1084, 1452
AcoI YGGCCR 2 cut(s) 189, 265
AcsI RAATTY 4 cut(s) 127, 761, 970, 976
AcuI CTGAAG 2 cut(s) 33, 391
AcyI GRCGYC 2 cut(s) 824, 1101
AfaI GTAC 4 cut(s) 461, 1145, 1460, 1471
AfiI CCNNNNNNNGG 1 cut(s) 117
AflIII ACRYGT 1 cut(s) 1035
AgsI TTSAA 5 cut(s) 624, 1174, 1203, 1397, 1428
AhlI ACTAGT 1 cut(s) 1472
AjnI CCWGG 2 cut(s) 60, 542
AloI GAACNNNNNNTCC 2 cut(s) 130, 162
Alw21I GWGCWC 1 cut(s) 452
Alw26I GTCTC 4 cut(s) 375, 1209, 1227, 1322
AlwI GGATC 4 cut(s) 140, 670, 1084, 1452
Ama87I CYCGRG 2 cut(s) 766, 887
Aor13HI TCCGGA 1 cut(s) 983
AoxI GGCC 3 cut(s) 108, 189, 265
ApeKI GCWGC 8 cut(s) 348, 751, 754, 788, 817, 1064, 1115, 1412
ApoI RAATTY 4 cut(s) 127, 761, 970, 976
AseI ATTAAT 2 cut(s) 102, 1263
Asp700I GAANNNNTTC 2 cut(s) 312, 404
AspLEI GCGC 1 cut(s) 605
AspS9I GGNCC 3 cut(s) 109, 238, 848
AsuC2I CCSGG 5 cut(s) 135, 338, 767, 768, 1029
AsuHPI GGTGA 4 cut(s) 248, 434, 770, 1131
AsuII TTCGAA 1 cut(s) 316
AvaI CYCGRG 2 cut(s) 766, 887
AvaII GGWCC 2 cut(s) 238, 848
BaeGI GKGCMC 1 cut(s) 376
BalI TGGCCA 1 cut(s) 191
BanII GRGCYC 3 cut(s) 80, 773, 1004
BarI GAAGNNNNNNTAC 2 cut(s) 1297, 1329
BauI CACGAG 2 cut(s) 359, 936
BbsI GAAGAC 1 cut(s) 963
Bbv12I GWGCWC 1 cut(s) 452
BbvI GCAGC 8 cut(s) 335, 763, 766, 800, 829, 1076, 1102, 1424
BccI CCATC 1 cut(s) 11
BcgI CGANNNNNNTGC 2 cut(s) 189, 223
BciT130I CCWGG 2 cut(s) 62, 544
BcnI CCSGG 5 cut(s) 135, 338, 767, 768, 1029
BcoDI GTCTC 4 cut(s) 375, 1209, 1227, 1322
BcuI ACTAGT 1 cut(s) 1472
BfaI CTAG 6 cut(s) 507, 797, 1295, 1317, 1406, 1473
BfmI CTRYAG 1 cut(s) 786
BfuAI ACCTGC 1 cut(s) 1296
BmcAI AGTACT 1 cut(s) 1471
Bme1390I CCNGG 7 cut(s) 62, 135, 338, 544, 767, 768, 1029
Bme18I GGWCC 2 cut(s) 238, 848
BmeT110I CYCGRG 2 cut(s) 766, 887
BmgT120I GGNCC 3 cut(s) 109, 238, 848
BmiI GGNNCC 2 cut(s) 239, 850
BmrFI CCNGG 7 cut(s) 62, 135, 338, 544, 767, 768, 1029
BmrI ACTGGG 1 cut(s) 1450
BmsI GCATC 4 cut(s) 142, 364, 571, 902
BmuI ACTGGG 1 cut(s) 1450
BpiI GAAGAC 1 cut(s) 963
BplI GAGNNNNNCTC 4 cut(s) 434, 466, 944, 976
BpmI CTGGAG 2 cut(s) 44, 126
Bpu10I CCTNAGC 1 cut(s) 1250
Bpu14I TTCGAA 1 cut(s) 316
BpuEI CTTGAG 2 cut(s) 98, 929
BpuMI CCSGG 5 cut(s) 135, 338, 767, 768, 1029
BsaHI GRCGYC 2 cut(s) 824, 1101
BsaI GGTCTC 3 cut(s) 375, 1227, 1322
BsaJI CCNNGG 3 cut(s) 278, 766, 888
BsaWI WCCGGW 2 cut(s) 389, 983
Bsc4I CCNNNNNNNGG 1 cut(s) 117
Bse118I RCCGGY 1 cut(s) 820
Bse1I ACTGG 4 cut(s) 469, 868, 1306, 1456
BseAI TCCGGA 1 cut(s) 983
BseBI CCWGG 2 cut(s) 62, 544
BseDI CCNNGG 3 cut(s) 278, 766, 888
BseGI GGATG 1 cut(s) 717
BseLI CCNNNNNNNGG 1 cut(s) 117
BseMII CTCAG 2 cut(s) 786, 1241
BseNI ACTGG 4 cut(s) 469, 868, 1306, 1456
BseRI GAGGAG 1 cut(s) 965
BseSI GKGCMC 1 cut(s) 376
BseXI GCAGC 8 cut(s) 335, 763, 766, 800, 829, 1076, 1102, 1424
BsgI GTGCAG 2 cut(s) 836, 1431
Bsh1236I CGCG 1 cut(s) 264
BshFI GGCC 3 cut(s) 110, 191, 267
BsiHKAI GWGCWC 1 cut(s) 452
BsiHKCI CYCGRG 2 cut(s) 766, 887
BsiSI CCGG 9 cut(s) 107, 135, 338, 390, 767, 821, 984, 1028, 1112
BslFI GGGAC 3 cut(s) 157, 251, 517
BslI CCNNNNNNNGG 1 cut(s) 117
BsmAI GTCTC 4 cut(s) 375, 1209, 1227, 1322
BsmBI CGTCTC 1 cut(s) 1209
BsmFI GGGAC 3 cut(s) 157, 251, 517
BsnI GGCC 3 cut(s) 110, 191, 267
Bso31I GGTCTC 3 cut(s) 375, 1227, 1322
BsoBI CYCGRG 2 cut(s) 766, 887
Bsp119I TTCGAA 1 cut(s) 316
Bsp1286I GDGCHC 5 cut(s) 80, 376, 452, 773, 1004
Bsp13I TCCGGA 1 cut(s) 983
Bsp143I GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
Bsp19I CCATGG 1 cut(s) 278
BspACI CCGC 3 cut(s) 264, 501, 590
BspANI GGCC 3 cut(s) 110, 191, 267
BspCNI CTCAG 2 cut(s) 785, 1242
BspEI TCCGGA 1 cut(s) 983
BspFNI CGCG 1 cut(s) 264
BspHI TCATGA 2 cut(s) 654, 1128
BspLI GGNNCC 2 cut(s) 239, 850
BspMAI CTGCAG 1 cut(s) 790
BspMI ACCTGC 1 cut(s) 1296
BspPI GGATC 4 cut(s) 140, 670, 1084, 1452
BspQI GCTCTTC 1 cut(s) 338
BspT104I TTCGAA 1 cut(s) 316
BspTNI GGTCTC 3 cut(s) 375, 1227, 1322
BsrFI RCCGGY 1 cut(s) 820
BsrI ACTGG 4 cut(s) 469, 868, 1306, 1456
BssAI RCCGGY 1 cut(s) 820
BssECI CCNNGG 3 cut(s) 278, 766, 888
BssMI GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
BssNI GRCGYC 2 cut(s) 824, 1101
BssSI CACGAG 2 cut(s) 359, 936
BssT1I CCWWGG 1 cut(s) 278
Bst2BI CACGAG 2 cut(s) 359, 936
Bst2UI CCWGG 2 cut(s) 62, 544
Bst4CI ACNGT 4 cut(s) 422, 527, 1143, 1463
Bst6I CTCTTC 4 cut(s) 338, 859, 1141, 1331
BstACI GRCGYC 2 cut(s) 824, 1101
BstAPI GCANNNNNTGC 1 cut(s) 498
BstBI TTCGAA 1 cut(s) 316
BstC8I GCNNGC 2 cut(s) 353, 822
BstDEI CTNAG 3 cut(s) 772, 1250, 1485
BstDSI CCRYGG 1 cut(s) 278
BstF5I GGATG 1 cut(s) 717
BstFNI CGCG 1 cut(s) 264
BstHHI GCGC 1 cut(s) 605
BstKTI GATC 6 cut(s) 148, 299, 665, 778, 1079, 1447
BstMAI GTCTC 4 cut(s) 375, 1209, 1227, 1322
BstMBI GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
BstMWI GCNNNNNNNGC 6 cut(s) 216, 225, 361, 498, 590, 1421
BstNI CCWGG 2 cut(s) 62, 544
BstNSI RCATGY 1 cut(s) 1039
BstSCI CCNGG 7 cut(s) 60, 133, 336, 542, 765, 766, 1027
BstSFI CTRYAG 1 cut(s) 786
BstSLI GKGCMC 1 cut(s) 376
BstUI CGCG 1 cut(s) 264
BstV1I GCAGC 8 cut(s) 335, 763, 766, 800, 829, 1076, 1102, 1424
BstV2I GAAGAC 1 cut(s) 963
BstX2I RGATCY 3 cut(s) 145, 662, 1076
BstYI RGATCY 3 cut(s) 145, 662, 1076
BsuRI GGCC 3 cut(s) 110, 191, 267
BtgI CCRYGG 1 cut(s) 278
BtsCI GGATG 1 cut(s) 717
BtsIMutI CAGTG 1 cut(s) 875
BveI ACCTGC 1 cut(s) 1296
Cac8I GCNNGC 2 cut(s) 353, 822
CciI TCATGA 2 cut(s) 654, 1128
CfoI GCGC 1 cut(s) 605
Cfr10I RCCGGY 1 cut(s) 820
Cfr13I GGNCC 3 cut(s) 109, 238, 848
Cfr9I CCCGGG 1 cut(s) 766
CseI GACGC 2 cut(s) 270, 813
Csp6I GTAC 4 cut(s) 460, 1144, 1459, 1470
CviAII CATG 4 cut(s) 279, 655, 1036, 1129
CviQI GTAC 4 cut(s) 460, 1144, 1459, 1470
DdeI CTNAG 3 cut(s) 772, 1250, 1485
DpnI GATC 6 cut(s) 147, 298, 664, 777, 1078, 1446
DpnII GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 2 cut(s) 189, 265
Eam1104I CTCTTC 4 cut(s) 338, 859, 1141, 1331
EarI CTCTTC 4 cut(s) 338, 859, 1141, 1331
Eco130I CCWWGG 1 cut(s) 278
Eco24I GRGCYC 3 cut(s) 80, 773, 1004
Eco31I GGTCTC 3 cut(s) 375, 1227, 1322
Eco47I GGWCC 2 cut(s) 238, 848
Eco57I CTGAAG 2 cut(s) 33, 391
Eco88I CYCGRG 2 cut(s) 766, 887
EcoRI GAATTC 1 cut(s) 761
EcoRII CCWGG 2 cut(s) 60, 542
EcoT14I CCWWGG 1 cut(s) 278
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 3 cut(s) 80, 773, 1004
ErhI CCWWGG 1 cut(s) 278
Esp3I CGTCTC 1 cut(s) 1209
FaeI CATG 4 cut(s) 282, 658, 1039, 1132
FalI AAGNNNNNCTT 7 cut(s) 38, 389, 421, 1328, 1360, 1408, 1440
FaqI GGGAC 3 cut(s) 157, 251, 517
FatI CATG 4 cut(s) 278, 654, 1035, 1128
FauI CCCGC 1 cut(s) 494
FblI GTMKAC 2 cut(s) 327, 1104
FokI GGATG 1 cut(s) 704
FriOI GRGCYC 3 cut(s) 80, 773, 1004
FspBI CTAG 6 cut(s) 507, 797, 1295, 1317, 1406, 1473
GlaI GCGC 1 cut(s) 604
GsuI CTGGAG 2 cut(s) 44, 126
HaeIII GGCC 3 cut(s) 110, 191, 267
HapII CCGG 9 cut(s) 107, 135, 338, 390, 767, 821, 984, 1028, 1112
HgaI GACGC 2 cut(s) 270, 813
HhaI GCGC 1 cut(s) 605
Hin1I GRCGYC 2 cut(s) 824, 1101
Hin1II CATG 4 cut(s) 282, 658, 1039, 1132
Hin6I GCGC 1 cut(s) 603
HinP1I GCGC 1 cut(s) 603
HincII GTYRAC 1 cut(s) 1105
HindII GTYRAC 1 cut(s) 1105
HinfI GANTC 9 cut(s) 65, 201, 313, 393, 910, 942, 959, 1024, 1273
HpaII CCGG 9 cut(s) 107, 135, 338, 390, 767, 821, 984, 1028, 1112
HphI GGTGA 4 cut(s) 248, 434, 770, 1131
Hpy166II GTNNAC 3 cut(s) 328, 900, 1105
Hpy8I GTNNAC 3 cut(s) 328, 900, 1105
Hpy99I CGWCG 5 cut(s) 264, 829, 832, 1103, 1106
HpyAV CCTTC 5 cut(s) 284, 316, 375, 1129, 1399
HpyCH4III ACNGT 4 cut(s) 422, 527, 1143, 1463
HpyCH4IV ACGT 2 cut(s) 330, 1101
HpyCH4V TGCA 9 cut(s) 155, 219, 250, 355, 584, 788, 817, 1057, 1412
HpyF10VI GCNNNNNNNGC 6 cut(s) 216, 225, 361, 498, 590, 1421
HpyF3I CTNAG 3 cut(s) 772, 1250, 1485
HpySE526I ACGT 2 cut(s) 330, 1101
Hsp92I GRCGYC 2 cut(s) 824, 1101
Hsp92II CATG 4 cut(s) 282, 658, 1039, 1132
HspAI GCGC 1 cut(s) 603
Kpn2I TCCGGA 1 cut(s) 983
KroI GCCGGC 1 cut(s) 820
KroNI GCCGGC 1 cut(s) 822
Kzo9I GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
LguI GCTCTTC 1 cut(s) 338
Lsp1109I GCAGC 8 cut(s) 335, 763, 766, 800, 829, 1076, 1102, 1424
LweI GCATC 4 cut(s) 142, 364, 571, 902
MaeI CTAG 6 cut(s) 507, 797, 1295, 1317, 1406, 1473
MaeII ACGT 2 cut(s) 330, 1101
MaeIII GTNAC 3 cut(s) 521, 1031, 1384
MalI GATC 6 cut(s) 147, 298, 664, 777, 1078, 1446
MboI GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
MflI RGATCY 3 cut(s) 145, 662, 1076
MhlI GDGCHC 5 cut(s) 80, 376, 452, 773, 1004
MlsI TGGCCA 1 cut(s) 191
MluCI AATT 5 cut(s) 127, 725, 761, 970, 976
MluNI TGGCCA 1 cut(s) 191
MlyI GAGTC 4 cut(s) 74, 936, 953, 1033
MmeI TCCRAC 1 cut(s) 766
Mox20I TGGCCA 1 cut(s) 191
Mph1103I ATGCAT 1 cut(s) 586
MroI TCCGGA 1 cut(s) 983
MroNI GCCGGC 1 cut(s) 820
MroXI GAANNNNTTC 2 cut(s) 312, 404
MscI TGGCCA 1 cut(s) 191
MseI TTAA 6 cut(s) 102, 639, 974, 1263, 1346, 1377
Msp20I TGGCCA 1 cut(s) 191
MspI CCGG 9 cut(s) 107, 135, 338, 390, 767, 821, 984, 1028, 1112
MspR9I CCNGG 7 cut(s) 62, 135, 338, 544, 767, 768, 1029
MvaI CCWGG 2 cut(s) 62, 544
MvnI CGCG 1 cut(s) 264
MwoI GCNNNNNNNGC 6 cut(s) 216, 225, 361, 498, 590, 1421
NaeI GCCGGC 1 cut(s) 822
NciI CCSGG 5 cut(s) 135, 338, 767, 768, 1029
NcoI CCATGG 1 cut(s) 278
NdeII GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
NgoMIV GCCGGC 1 cut(s) 820
NlaIII CATG 4 cut(s) 282, 658, 1039, 1132
NlaIV GGNNCC 2 cut(s) 239, 850
NmuCI GTSAC 2 cut(s) 521, 1031
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 1 cut(s) 1039
NspV TTCGAA 1 cut(s) 316
PagI TCATGA 2 cut(s) 654, 1128
PciI ACATGT 1 cut(s) 1035
PciSI GCTCTTC 1 cut(s) 338
PdiI GCCGGC 1 cut(s) 822
PdmI GAANNNNTTC 2 cut(s) 312, 404
PfeI GAWTC 5 cut(s) 201, 313, 393, 910, 1273
PfoI TCCNGGA 2 cut(s) 60, 542
PleI GAGTC 4 cut(s) 73, 936, 953, 1032
PpsI GAGTC 4 cut(s) 73, 936, 953, 1032
PscI ACATGT 1 cut(s) 1035
PshBI ATTAAT 2 cut(s) 102, 1263
Psp6I CCWGG 2 cut(s) 60, 542
PspGI CCWGG 2 cut(s) 60, 542
PspN4I GGNNCC 2 cut(s) 239, 850
PspPI GGNCC 3 cut(s) 109, 238, 848
PstI CTGCAG 1 cut(s) 790
PsuI RGATCY 3 cut(s) 145, 662, 1076
RsaI GTAC 4 cut(s) 461, 1145, 1460, 1471
RsaNI GTAC 4 cut(s) 460, 1144, 1459, 1470
SalI GTCGAC 1 cut(s) 1103
SapI GCTCTTC 1 cut(s) 338
SaqAI TTAA 6 cut(s) 102, 639, 974, 1263, 1346, 1377
Sau3AI GATC 6 cut(s) 145, 296, 662, 775, 1076, 1444
Sau96I GGNCC 3 cut(s) 109, 238, 848
ScaI AGTACT 1 cut(s) 1471
SchI GAGTC 4 cut(s) 74, 936, 953, 1033
ScrFI CCNGG 7 cut(s) 62, 135, 338, 544, 767, 768, 1029
SduI GDGCHC 5 cut(s) 80, 376, 452, 773, 1004
SfaNI GCATC 4 cut(s) 142, 364, 571, 902
SfcI CTRYAG 1 cut(s) 786
SfuI TTCGAA 1 cut(s) 316
SinI GGWCC 2 cut(s) 238, 848
SmaI CCCGGG 1 cut(s) 768
SmiI ATTTAAAT 1 cut(s) 975
SmlI CTYRAG 2 cut(s) 113, 944
SmoI CTYRAG 2 cut(s) 113, 944
SpeI ACTAGT 1 cut(s) 1472
Sse9I AATT 5 cut(s) 127, 725, 761, 970, 976
SsiI CCGC 3 cut(s) 264, 501, 590
SspMI CTAG 6 cut(s) 507, 797, 1295, 1317, 1406, 1473
StyD4I CCNGG 7 cut(s) 60, 133, 336, 542, 765, 766, 1027
StyI CCWWGG 1 cut(s) 278
SwaI ATTTAAAT 1 cut(s) 975
TaaI ACNGT 4 cut(s) 422, 527, 1143, 1463
TaiI ACGT 2 cut(s) 333, 1104
TaqI TCGA 7 cut(s) 35, 299, 306, 316, 452, 1104, 1238
TaqII GACCGA 1 cut(s) 1346
TasI AATT 5 cut(s) 127, 725, 761, 970, 976
TatI WGTACW 2 cut(s) 1458, 1469
TauI GCSGC 2 cut(s) 267, 593
TfiI GAWTC 5 cut(s) 201, 313, 393, 910, 1273
Tru1I TTAA 6 cut(s) 102, 639, 974, 1263, 1346, 1377
Tru9I TTAA 6 cut(s) 102, 639, 974, 1263, 1346, 1377
TscAI CASTG 1 cut(s) 875
TseFI GTSAC 2 cut(s) 521, 1031
TseI GCWGC 8 cut(s) 348, 751, 754, 788, 817, 1064, 1115, 1412
Tsp45I GTSAC 2 cut(s) 521, 1031
TspDTI ATGAA 7 cut(s) 547, 643, 671, 1117, 1145, 1233, 1298
TspGWI ACGGA 1 cut(s) 1215
TspMI CCCGGG 1 cut(s) 766
TspRI CASTG 1 cut(s) 875
VpaK11BI GGWCC 2 cut(s) 238, 848
VspI ATTAAT 2 cut(s) 102, 1263
XapI RAATTY 4 cut(s) 127, 761, 970, 976
XbaI TCTAGA 1 cut(s) 1316
XceI RCATGY 1 cut(s) 1039
XmaI CCCGGG 1 cut(s) 766
XmiI GTMKAC 2 cut(s) 327, 1104
XmnI GAANNNNTTC 2 cut(s) 312, 404
XspI CTAG 6 cut(s) 507, 797, 1295, 1317, 1406, 1473
ZraI GACGTC 1 cut(s) 1102
ZrmI AGTACT 1 cut(s) 1471
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.