Rh5BG401800

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0017273
Physical Location & Seq
Reverse (-)
65212469 .. 65216039
3571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG401800.1

Sequence Viewer

Length: 1308 bp
ATGGCCACAAACCGATTTGTTTGCGAAATCTGCAACAAAGGCTTCCAGAGGGACCAGAACTTGCAACTTCACCGACGCGGCCACAACCTTCCATGGAAGCTGAAACAAAGATCGAAGCTCGAAGTGATTCGAAAAAAGGTCTACGTCTGCCCCGAGAAGAGTTGCGTGCACCACGAGCCTTCACGGGCTCTCGGAGACCTCACCGGAATCAAGAAGCACTTCAGCAGAAAGCACGGTGAGAAAAAATGGAAGTGCGAGAAATGCTCGAAGAAGTACGCAGTCCAGTCAGATTGGAAAGCACATAGCAAGATTTGCGGGACTAGAGAGTATAGATGTGACTGTGGCACACTCTTTTCCAGGAAAGATAGCTTCATAACTCATAGAGCTTTCTGTGATGCATTAGCGGCTGAAGAAAGCGCAAGGTTTGGTTCAACTTCAACAGCCACGAACATTAATGTTCCGAGCTTCATGAATGGATCTATTACAAATAATCAGCCTCATCATCATCAACAACAACAACAACAAGCGAGGAACATCCCCCATTTCTTACCAATCTTCCAACATCAGCAGCAGCCCGAATTCTCGGGCTCAGGTCACCTCTCTGCAGTCAACTTAGGCTTGCCTGAAATGGTGCAAACGGCGTCGTCAATGGATATGTTCGGACCCTCTTCCTCACAGAACCAGTGGCTCAACAAGTTCCCCGAGGCATCATTTACGAACGGGAATCTCTCGATGTCGTCATTAATGTCGACACGGGGACACAAGGAGGAGGAAGACTCCAAAGCAAATTTAAATTTGTCCGGAACGATGAGTTCGAGCTCTTTCTATAACAATAATCAAAGTCTAGGTCACATGTCAGCGACCGCACTCTTGCAAAAAGCTGCTCAAATGGGATCTACAACGAGCAACAACAGCGACGTCATTCCAGCGGCCTTTGGCTTCATGAACTCTTCACCATACAGCCACAACAAGAACGATGAGAATTTCAATGTATTGCTCAACTCCCTATCTCCTTCAACTCAAATAGGAGACGGGTCTTCGTCATTGTTTTCGACTTCATTCTTGAGCAACAAGATCAATCATCTAAATCACATGATGAATCTGCCTCTAGCAAGCAGTAGTTCTACTACTACAGTGAATGAGACCGAGAAGAGTAGCTTAACGAGGGATTTTCTCGGAGTAGGTGGAGTTACTGGTGTACCCTTCTTTCAACAAGAGCTAGGTGCAGCAAATTTAGCTTCAATGGGTTCAGCTATGGATCACTTGACCCAGTACAGTAGCAATACTAGTGGTGCTACTCAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz

Protein Analysis

435

Amino Acids

48.04

Weight (kDa)

9.09

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 44 - 78 4.7e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 82 - 106 7.7e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 109 - 147 1.2e-21 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017273)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32700
malus_domestica MD03G1114800.v1.1 MD11G1133100.v1.1
prunus_persica Prupe.6G098800_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0059771
rosa_laevigata RLG00000035327
rosa_roxburghii Rroxscaffold_1G00020810
rosa_rugosa Rorug05G0325000
rosa_samantha Rh5AG390400 Rh5BG401800 Rh5CG425900 Rh5DG418200
rosa_wichuraiana Rw5G036720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 921
AccI GTMKAC 2 cut(s) 141, 749
AccII CGCG 1 cut(s) 78
AccIII TCCGGA 1 cut(s) 800
AciI CCGC 5 cut(s) 78, 315, 404, 864, 929
AclWI GGATC 3 cut(s) 484, 901, 1266
AcoI YGGCCR 2 cut(s) 3, 79
AcsI RAATTY 5 cut(s) 578, 787, 793, 982, 1231
AcuI CTGAAG 2 cut(s) 205, 429
AcyI GRCGYC 2 cut(s) 641, 918
AfaI GTAC 3 cut(s) 275, 1200, 1274
AflIII ACRYGT 1 cut(s) 852
AgsI TTSAA 6 cut(s) 432, 438, 988, 1017, 1211, 1242
AhlI ACTAGT 1 cut(s) 1286
AjnI CCWGG 1 cut(s) 356
Alw21I GWGCWC 2 cut(s) 171, 821
Alw26I GTCTC 3 cut(s) 189, 1023, 1136
Alw44I GTGCAC 1 cut(s) 167
AlwI GGATC 3 cut(s) 484, 901, 1266
Ama87I CYCGRG 3 cut(s) 152, 583, 701
Aor13HI TCCGGA 1 cut(s) 800
AoxI GGCC 3 cut(s) 3, 79, 930
ApaLI GTGCAC 1 cut(s) 167
ApeKI GCWGC 4 cut(s) 568, 571, 881, 1226
ApoI RAATTY 5 cut(s) 578, 787, 793, 982, 1231
ArsI GACNNNNNNTTYG 2 cut(s) 832, 864
AseI ATTAAT 2 cut(s) 453, 743
Asp700I GAANNNNTTC 2 cut(s) 126, 218
AspLEI GCGC 1 cut(s) 419
AspS9I GGNCC 2 cut(s) 52, 662
AsuHPI GGTGA 5 cut(s) 62, 193, 248, 587, 945
AsuII TTCGAA 1 cut(s) 130
AvaI CYCGRG 3 cut(s) 152, 583, 701
AvaII GGWCC 2 cut(s) 52, 662
BaeGI GKGCMC 1 cut(s) 171
BaeI ACNNNNGTAYC 2 cut(s) 1182, 1215
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 3 cut(s) 190, 590, 821
BauI CACGAG 1 cut(s) 173
BbsI GAAGAC 2 cut(s) 780, 1029
Bbv12I GWGCWC 2 cut(s) 171, 821
BbvI GCAGC 4 cut(s) 580, 583, 868, 1238
BceAI ACGGC 1 cut(s) 654
BcgI CGANNNNNNTGC 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 358
BcoDI GTCTC 3 cut(s) 189, 1023, 1136
BcuI ACTAGT 1 cut(s) 1286
BfaI CTAG 5 cut(s) 321, 845, 1109, 1220, 1287
BfmI CTRYAG 2 cut(s) 603, 1131
BisI GCNGC 7 cut(s) 79, 405, 569, 572, 882, 930, 1227
BlsI GCNGC 7 cut(s) 80, 406, 570, 573, 883, 931, 1228
Bme1390I CCNGG 1 cut(s) 358
Bme18I GGWCC 2 cut(s) 52, 662
BmeT110I CYCGRG 3 cut(s) 152, 583, 701
BmgT120I GGNCC 2 cut(s) 52, 662
BmiI GGNNCC 2 cut(s) 53, 664
BmrFI CCNGG 1 cut(s) 358
BmrI ACTGGG 1 cut(s) 1264
BmsI GCATC 2 cut(s) 385, 716
BmuI ACTGGG 1 cut(s) 1264
BpiI GAAGAC 2 cut(s) 780, 1029
BplI GAGNNNNNCTC 4 cut(s) 248, 280, 761, 793
Bpu10I CCTNAGC 1 cut(s) 589
Bpu14I TTCGAA 1 cut(s) 130
BpuEI CTTGAG 1 cut(s) 1084
BsaHI GRCGYC 2 cut(s) 641, 918
BsaI GGTCTC 2 cut(s) 189, 1136
BsaJI CCNNGG 2 cut(s) 92, 702
BsaWI WCCGGW 2 cut(s) 203, 800
Bse1I ACTGG 4 cut(s) 283, 682, 1198, 1270
BseAI TCCGGA 1 cut(s) 800
BseBI CCWGG 1 cut(s) 358
BseDI CCNNGG 2 cut(s) 92, 702
BseGI GGATG 1 cut(s) 534
BseMII CTCAG 1 cut(s) 603
BseNI ACTGG 4 cut(s) 283, 682, 1198, 1270
BseRI GAGGAG 1 cut(s) 782
BseSI GKGCMC 1 cut(s) 171
BseXI GCAGC 4 cut(s) 580, 583, 868, 1238
BsgI GTGCAG 1 cut(s) 1245
Bsh1236I CGCG 1 cut(s) 78
Bsh1285I CGRYCG 1 cut(s) 864
BshFI GGCC 3 cut(s) 5, 81, 932
BsiEI CGRYCG 1 cut(s) 864
BsiHKAI GWGCWC 2 cut(s) 171, 821
BsiHKCI CYCGRG 3 cut(s) 152, 583, 701
BsiSI CCGG 2 cut(s) 204, 801
BslFI GGGAC 3 cut(s) 65, 331, 771
BsmAI GTCTC 3 cut(s) 189, 1023, 1136
BsmBI CGTCTC 1 cut(s) 1023
BsmFI GGGAC 3 cut(s) 65, 331, 771
BsnI GGCC 3 cut(s) 5, 81, 932
Bso31I GGTCTC 2 cut(s) 189, 1136
BsoBI CYCGRG 3 cut(s) 152, 583, 701
Bsp119I TTCGAA 1 cut(s) 130
Bsp1286I GDGCHC 4 cut(s) 171, 190, 590, 821
Bsp13I TCCGGA 1 cut(s) 800
Bsp143I GATC 5 cut(s) 110, 476, 893, 1074, 1258
Bsp19I CCATGG 1 cut(s) 92
BspACI CCGC 5 cut(s) 78, 315, 404, 864, 929
BspANI GGCC 3 cut(s) 5, 81, 932
BspCNI CTCAG 1 cut(s) 602
BspEI TCCGGA 1 cut(s) 800
BspFNI CGCG 1 cut(s) 78
BspHI TCATGA 2 cut(s) 468, 942
BspLI GGNNCC 2 cut(s) 53, 664
BspMAI CTGCAG 1 cut(s) 607
BspPI GGATC 3 cut(s) 484, 901, 1266
BspT104I TTCGAA 1 cut(s) 130
BspTNI GGTCTC 2 cut(s) 189, 1136
BsrI ACTGG 4 cut(s) 283, 682, 1198, 1270
BssECI CCNNGG 2 cut(s) 92, 702
BssMI GATC 5 cut(s) 110, 476, 893, 1074, 1258
BssNI GRCGYC 2 cut(s) 641, 918
BssSI CACGAG 1 cut(s) 173
BssT1I CCWWGG 1 cut(s) 92
Bst2BI CACGAG 1 cut(s) 173
Bst2UI CCWGG 1 cut(s) 358
Bst4CI ACNGT 4 cut(s) 236, 341, 1135, 1277
Bst6I CTCTTC 4 cut(s) 152, 673, 955, 1145
BstACI GRCGYC 2 cut(s) 641, 918
BstAPI GCANNNNNTGC 1 cut(s) 312
BstBI TTCGAA 1 cut(s) 130
BstC8I GCNNGC 3 cut(s) 167, 620, 1114
BstDEI CTNAG 3 cut(s) 589, 613, 1299
BstDSI CCRYGG 1 cut(s) 92
BstEII GGTNACC 1 cut(s) 593
BstF5I GGATG 1 cut(s) 534
BstFNI CGCG 1 cut(s) 78
BstHHI GCGC 1 cut(s) 419
BstKTI GATC 5 cut(s) 113, 479, 896, 1077, 1261
BstMAI GTCTC 3 cut(s) 189, 1023, 1136
BstMBI GATC 5 cut(s) 110, 476, 893, 1074, 1258
BstMCI CGRYCG 1 cut(s) 864
BstMWI GCNNNNNNNGC 8 cut(s) 30, 39, 175, 261, 312, 404, 912, 1235
BstNI CCWGG 1 cut(s) 358
BstNSI RCATGY 1 cut(s) 856
BstPI GGTNACC 1 cut(s) 593
BstSCI CCNGG 1 cut(s) 356
BstSFI CTRYAG 2 cut(s) 603, 1131
BstSLI GKGCMC 1 cut(s) 171
BstUI CGCG 1 cut(s) 78
BstV1I GCAGC 4 cut(s) 580, 583, 868, 1238
BstV2I GAAGAC 2 cut(s) 780, 1029
BstX2I RGATCY 2 cut(s) 476, 893
BstYI RGATCY 2 cut(s) 476, 893
BsuRI GGCC 3 cut(s) 5, 81, 932
BtgI CCRYGG 1 cut(s) 92
BtsCI GGATG 1 cut(s) 534
BtsIMutI CAGTG 2 cut(s) 689, 1140
Cac8I GCNNGC 3 cut(s) 167, 620, 1114
CciI TCATGA 2 cut(s) 468, 942
CfoI GCGC 1 cut(s) 419
Cfr13I GGNCC 2 cut(s) 52, 662
CseI GACGC 2 cut(s) 84, 630
Csp6I GTAC 3 cut(s) 274, 1199, 1273
CspCI CAANNNNNGTGG 2 cut(s) 1270, 1305
CviAII CATG 5 cut(s) 93, 469, 853, 943, 1093
CviQI GTAC 3 cut(s) 274, 1199, 1273
DdeI CTNAG 3 cut(s) 589, 613, 1299
DpnI GATC 5 cut(s) 112, 478, 895, 1076, 1260
DpnII GATC 5 cut(s) 110, 476, 893, 1074, 1258
DraI TTTAAA 1 cut(s) 792
EaeI YGGCCR 2 cut(s) 3, 79
Eam1104I CTCTTC 4 cut(s) 152, 673, 955, 1145
EarI CTCTTC 4 cut(s) 152, 673, 955, 1145
Ecl136II GAGCTC 1 cut(s) 819
Eco130I CCWWGG 1 cut(s) 92
Eco24I GRGCYC 3 cut(s) 190, 590, 821
Eco31I GGTCTC 2 cut(s) 189, 1136
Eco47I GGWCC 2 cut(s) 52, 662
Eco53kI GAGCTC 1 cut(s) 819
Eco57I CTGAAG 2 cut(s) 205, 429
Eco88I CYCGRG 3 cut(s) 152, 583, 701
Eco91I GGTNACC 1 cut(s) 593
EcoICRI GAGCTC 1 cut(s) 819
EcoO65I GGTNACC 1 cut(s) 593
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 1 cut(s) 356
EcoT14I CCWWGG 1 cut(s) 92
EcoT22I ATGCAT 1 cut(s) 400
EcoT38I GRGCYC 3 cut(s) 190, 590, 821
ErhI CCWWGG 1 cut(s) 92
Esp3I CGTCTC 1 cut(s) 1023
FaeI CATG 5 cut(s) 96, 472, 856, 946, 1096
FalI AAGNNNNNCTT 4 cut(s) 203, 235, 1142, 1174
FaqI GGGAC 3 cut(s) 65, 331, 771
FatI CATG 5 cut(s) 92, 468, 852, 942, 1092
FauI CCCGC 1 cut(s) 308
FblI GTMKAC 2 cut(s) 141, 749
Fnu4HI GCNGC 7 cut(s) 79, 405, 569, 572, 882, 930, 1227
FokI GGATG 1 cut(s) 521
FriOI GRGCYC 3 cut(s) 190, 590, 821
Fsp4HI GCNGC 7 cut(s) 79, 405, 569, 572, 882, 930, 1227
FspBI CTAG 5 cut(s) 321, 845, 1109, 1220, 1287
GlaI GCGC 1 cut(s) 418
GluI GCNGC 7 cut(s) 79, 405, 569, 572, 882, 930, 1227
HaeIII GGCC 3 cut(s) 5, 81, 932
HapII CCGG 2 cut(s) 204, 801
HgaI GACGC 2 cut(s) 84, 630
HhaI GCGC 1 cut(s) 419
Hin1I GRCGYC 2 cut(s) 641, 918
Hin1II CATG 5 cut(s) 96, 472, 856, 946, 1096
Hin6I GCGC 1 cut(s) 417
HinP1I GCGC 1 cut(s) 417
HincII GTYRAC 2 cut(s) 610, 750
HindII GTYRAC 2 cut(s) 610, 750
HinfI GANTC 5 cut(s) 127, 207, 724, 776, 1099
HpaII CCGG 2 cut(s) 204, 801
HphI GGTGA 5 cut(s) 62, 193, 248, 587, 945
Hpy166II GTNNAC 5 cut(s) 142, 169, 610, 750, 1199
Hpy188I TCNGA 5 cut(s) 194, 289, 462, 662, 1178
Hpy188III TCNNGA 7 cut(s) 46, 211, 469, 730, 801, 943, 1063
Hpy8I GTNNAC 5 cut(s) 142, 169, 610, 750, 1199
Hpy99I CGWCG 3 cut(s) 78, 646, 920
HpyAV CCTTC 4 cut(s) 98, 189, 1023, 1213
HpyCH4III ACNGT 4 cut(s) 236, 341, 1135, 1277
HpyCH4IV ACGT 2 cut(s) 144, 918
HpyCH4V TGCA 8 cut(s) 33, 64, 169, 398, 605, 634, 874, 1226
HpyF10VI GCNNNNNNNGC 8 cut(s) 30, 39, 175, 261, 312, 404, 912, 1235
HpyF3I CTNAG 3 cut(s) 589, 613, 1299
HpySE526I ACGT 2 cut(s) 144, 918
Hsp92I GRCGYC 2 cut(s) 641, 918
Hsp92II CATG 5 cut(s) 96, 472, 856, 946, 1096
HspAI GCGC 1 cut(s) 417
Kpn2I TCCGGA 1 cut(s) 800
Kzo9I GATC 5 cut(s) 110, 476, 893, 1074, 1258
Lsp1109I GCAGC 4 cut(s) 580, 583, 868, 1238
LweI GCATC 2 cut(s) 385, 716
MaeI CTAG 5 cut(s) 321, 845, 1109, 1220, 1287
MaeII ACGT 2 cut(s) 144, 918
MaeIII GTNAC 4 cut(s) 335, 593, 848, 1189
MalI GATC 5 cut(s) 112, 478, 895, 1076, 1260
MboI GATC 5 cut(s) 110, 476, 893, 1074, 1258
MboII GAAGA 9 cut(s) 169, 280, 422, 547, 660, 785, 942, 1029, 1162
MflI RGATCY 2 cut(s) 476, 893
MhlI GDGCHC 4 cut(s) 171, 190, 590, 821
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 578, 787, 793, 982, 1231
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 770
MmeI TCCRAC 1 cut(s) 583
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 400
MroI TCCGGA 1 cut(s) 800
MroXI GAANNNNTTC 2 cut(s) 126, 218
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 453, 743, 791, 1160
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 929
MspI CCGG 2 cut(s) 204, 801
MspR9I CCNGG 1 cut(s) 358
MvaI CCWGG 1 cut(s) 358
MvnI CGCG 1 cut(s) 78
MwoI GCNNNNNNNGC 8 cut(s) 30, 39, 175, 261, 312, 404, 912, 1235
NcoI CCATGG 1 cut(s) 92
NdeII GATC 5 cut(s) 110, 476, 893, 1074, 1258
NlaIII CATG 5 cut(s) 96, 472, 856, 946, 1096
NlaIV GGNNCC 2 cut(s) 53, 664
NmuCI GTSAC 3 cut(s) 335, 593, 848
NsiI ATGCAT 1 cut(s) 400
NspI RCATGY 1 cut(s) 856
NspV TTCGAA 1 cut(s) 130
PagI TCATGA 2 cut(s) 468, 942
PciI ACATGT 1 cut(s) 852
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 812
PdmI GAANNNNTTC 2 cut(s) 126, 218
PfeI GAWTC 4 cut(s) 127, 207, 724, 1099
PfoI TCCNGGA 1 cut(s) 356
PkrI GCNGC 7 cut(s) 80, 406, 570, 573, 883, 931, 1228
PleI GAGTC 1 cut(s) 770
PpsI GAGTC 1 cut(s) 770
PscI ACATGT 1 cut(s) 852
PshBI ATTAAT 2 cut(s) 453, 743
Psp124BI GAGCTC 1 cut(s) 821
Psp6I CCWGG 1 cut(s) 356
PspEI GGTNACC 1 cut(s) 593
PspGI CCWGG 1 cut(s) 356
PspN4I GGNNCC 2 cut(s) 53, 664
PspPI GGNCC 2 cut(s) 52, 662
PstI CTGCAG 1 cut(s) 607
PsuI RGATCY 2 cut(s) 476, 893
RsaI GTAC 3 cut(s) 275, 1200, 1274
RsaNI GTAC 3 cut(s) 274, 1199, 1273
SacI GAGCTC 1 cut(s) 821
SalI GTCGAC 1 cut(s) 748
SaqAI TTAA 4 cut(s) 453, 743, 791, 1160
SatI GCNGC 7 cut(s) 79, 405, 569, 572, 882, 930, 1227
Sau3AI GATC 5 cut(s) 110, 476, 893, 1074, 1258
Sau96I GGNCC 2 cut(s) 52, 662
SchI GAGTC 1 cut(s) 770
ScrFI CCNGG 1 cut(s) 358
SduI GDGCHC 4 cut(s) 171, 190, 590, 821
SfaNI GCATC 2 cut(s) 385, 716
SfcI CTRYAG 2 cut(s) 603, 1131
SfuI TTCGAA 1 cut(s) 130
SinI GGWCC 2 cut(s) 52, 662
SmiI ATTTAAAT 1 cut(s) 792
SmlI CTYRAG 1 cut(s) 1063
SmoI CTYRAG 1 cut(s) 1063
SpeI ACTAGT 1 cut(s) 1286
Sse9I AATT 5 cut(s) 578, 787, 793, 982, 1231
SsiI CCGC 5 cut(s) 78, 315, 404, 864, 929
SspMI CTAG 5 cut(s) 321, 845, 1109, 1220, 1287
SstI GAGCTC 1 cut(s) 821
StyD4I CCNGG 1 cut(s) 356
StyI CCWWGG 1 cut(s) 92
SwaI ATTTAAAT 1 cut(s) 792
TaaI ACNGT 4 cut(s) 236, 341, 1135, 1277
TaiI ACGT 2 cut(s) 147, 921
TaqI TCGA 8 cut(s) 113, 120, 130, 266, 731, 749, 815, 1052
TaqII GACCGA 1 cut(s) 1160
TasI AATT 5 cut(s) 578, 787, 793, 982, 1231
TatI WGTACW 1 cut(s) 1272
TauI GCSGC 3 cut(s) 81, 407, 932
TfiI GAWTC 4 cut(s) 127, 207, 724, 1099
Tru1I TTAA 4 cut(s) 453, 743, 791, 1160
Tru9I TTAA 4 cut(s) 453, 743, 791, 1160
TscAI CASTG 2 cut(s) 689, 1140
TseFI GTSAC 3 cut(s) 335, 593, 848
TseI GCWGC 4 cut(s) 568, 571, 881, 1226
Tsp45I GTSAC 3 cut(s) 335, 593, 848
TspDTI ATGAA 7 cut(s) 361, 457, 485, 931, 959, 1047, 1112
TspRI CASTG 2 cut(s) 689, 1140
VneI GTGCAC 1 cut(s) 167
VpaK11BI GGWCC 2 cut(s) 52, 662
VspI ATTAAT 2 cut(s) 453, 743
XapI RAATTY 5 cut(s) 578, 787, 793, 982, 1231
XceI RCATGY 1 cut(s) 856
XmiI GTMKAC 2 cut(s) 141, 749
XmnI GAANNNNTTC 2 cut(s) 126, 218
XspI CTAG 5 cut(s) 321, 845, 1109, 1220, 1287
ZraI GACGTC 1 cut(s) 919
Zsp2I ATGCAT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.