Rw5G036720

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0017273
Physical Location & Seq
Reverse (-)
64442393 .. 64444199
1807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G036720.1

Sequence Viewer

Length: 1497 bp
ATGATGTCATCGGAAGATGGTCTTTCAGTTCCCTCGACTATTAGTGGAGGGTTTCTTCAACAGGAGCCAAATCCGAACCCTAGCCCTAACCCTAATATGAGTAATCCGGCACTCAAGAGGAAGCGAAATTTACCCGGAACTCCAGATCCAGATGCAGAAGTTATAGCTTTGTCCCCAAAATCTCTAATGGCCACAAACCGATTTGTTTGCGAAATCTGCAACAAAGGCTTCCAGAGGGACCAGAACTTGCAACTTCACCGACGCGGCCACAACCTTCCATGGAAGCTGAAACAAAGATCGAAGCTCGAAGTGATTCGAAAAAAGGTCTACGTCTGCCCCGAGAAGAGCTGCGTGCACCACGAGCCTTCACGGGCTCTTGGAGACCTCACCGGAATCAAGAAGCACTTCAGCAGAAAGCACGGTGAGAAAAAATGGAAGTGCGAGAAATGCTCGAAGAAGTACGCAGTCCAGTCAGATTGGAAAGCACATAGCAAGATTTGCGGGACTAGAGAGTATAGATGTGACTGTGGCACACTCTTTTCCAGGAAAGATAGCTTCATAACTCATAGAGCTTTCTGTGATGCATTAGCGGCTGAAGAAAGCGCAAGGTTTGGTTCAACTTCAACAGCCACGAACATTAATGTTCCTAGCTTCATGAATGGATCTATTACAAATAATCAGCCTCATCATCATCAACAACAACAACAACAACAAGCGAGGAACATCCCCCATTTCTTACCAATCTTCCAACATCAGCAGCAGCCCGAATTCTCGGGCTCAGGTCACCTCTCTGCAGTCAACTTAGCCTTGCCTGAAATAGTGCAAACGGCGTCGTCAATGGATATGTTCGGACCCTCTTCCTCACAGAACCAGTGGCTCAACAAGTTCCCCGAGGCATCATTTACGAACGGGAATCTCTCGATGTCGTCATTAATGTCGACACGGGGACACAAGGAGGAGGAAGACTCCAAAGCAAATTTAAATTTGTCCGGAACGATGAGTTCGAGCTCTTTCTATAACAATAATCAGAGTCTAGGTCACATGTCAGCGACCGCACTCTTGCAAAAAGCTGCTCAAATGGGATCTACAACGAGCAACAACAGCGACGTCATTCCGGCGGCATTTGGCTTCATGAACTCTTCACCATACAGCCACAACAAGAACGATGAGAACTTCAATGTATTGCTCAACTCCCTATCTCCTTCAACTCAAATAGGAGACGGGACTTCGTCATTGTTTTCGACTTCATTCTTGAGCAACAAGATCAATCATCTAAATCACATGATGAATCTGCCTCTAGCAAGCAGTAGTTCTACTACTACAGTGAATGAGACCGAGAAGAGTAGCTTAACGAGGGATTTTCTCGGAGTAGGTGGAGTTACTGGTGTACCCTTCTTTCAACAAGAGCTAGGTGCAGCAAATTTAGCTTCAATGGGTTCAGCTATGGATCACTTGACCCGGTACAGTAGCAGTACTAGTGGTGCTACTCAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz

Protein Analysis

498

Amino Acids

54.68

Weight (kDa)

9.06

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 106 - 140 5.6e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 144 - 168 9e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 171 - 209 1.4e-21 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017273)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32700
malus_domestica MD03G1114800.v1.1 MD11G1133100.v1.1
prunus_persica Prupe.6G098800_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0059771
rosa_laevigata RLG00000035327
rosa_roxburghii Rroxscaffold_1G00020810
rosa_rugosa Rorug05G0325000
rosa_samantha Rh5AG390400 Rh5BG401800 Rh5CG425900 Rh5DG418200
rosa_wichuraiana Rw5G036720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1110
AccI GTMKAC 2 cut(s) 327, 938
AccII CGCG 1 cut(s) 264
AccIII TCCGGA 1 cut(s) 989
AciI CCGC 5 cut(s) 264, 501, 590, 1053, 1118
AclWI GGATC 4 cut(s) 140, 670, 1090, 1455
AcoI YGGCCR 2 cut(s) 189, 265
AcsI RAATTY 5 cut(s) 127, 767, 976, 982, 1420
AcuI CTGAAG 2 cut(s) 391, 615
AcyI GRCGYC 2 cut(s) 830, 1107
AfaI GTAC 4 cut(s) 461, 1389, 1463, 1474
AflIII ACRYGT 1 cut(s) 1041
AgsI TTSAA 7 cut(s) 59, 618, 624, 1177, 1206, 1400, 1431
AhlI ACTAGT 1 cut(s) 1475
AjnI CCWGG 1 cut(s) 542
AloI GAACNNNNNNTCC 2 cut(s) 130, 162
Alw21I GWGCWC 2 cut(s) 357, 1010
Alw26I GTCTC 3 cut(s) 375, 1212, 1325
Alw44I GTGCAC 1 cut(s) 353
AlwI GGATC 4 cut(s) 140, 670, 1090, 1455
Ama87I CYCGRG 3 cut(s) 338, 772, 890
Aor13HI TCCGGA 1 cut(s) 989
AoxI GGCC 2 cut(s) 189, 265
ApaLI GTGCAC 1 cut(s) 353
ApeKI GCWGC 5 cut(s) 348, 757, 760, 1070, 1415
ApoI RAATTY 5 cut(s) 127, 767, 976, 982, 1420
AseI ATTAAT 2 cut(s) 639, 932
Asp700I GAANNNNTTC 2 cut(s) 312, 404
AspLEI GCGC 1 cut(s) 605
AspS9I GGNCC 2 cut(s) 238, 851
AsuC2I CCSGG 2 cut(s) 135, 1459
AsuHPI GGTGA 5 cut(s) 248, 379, 434, 776, 1134
AsuII TTCGAA 1 cut(s) 316
AvaI CYCGRG 3 cut(s) 338, 772, 890
AvaII GGWCC 2 cut(s) 238, 851
BaeGI GKGCMC 1 cut(s) 357
BaeI ACNNNNGTAYC 2 cut(s) 1371, 1404
BalI TGGCCA 1 cut(s) 191
BanII GRGCYC 3 cut(s) 376, 779, 1010
BauI CACGAG 1 cut(s) 359
BbsI GAAGAC 1 cut(s) 969
Bbv12I GWGCWC 2 cut(s) 357, 1010
BbvI GCAGC 5 cut(s) 335, 769, 772, 1057, 1427
BccI CCATC 1 cut(s) 11
BceAI ACGGC 1 cut(s) 843
BcgI CGANNNNNNTGC 2 cut(s) 189, 223
BciT130I CCWGG 1 cut(s) 544
BcnI CCSGG 2 cut(s) 135, 1459
BcoDI GTCTC 3 cut(s) 375, 1212, 1325
BcuI ACTAGT 1 cut(s) 1475
BfaI CTAG 7 cut(s) 81, 507, 648, 1034, 1298, 1409, 1476
BfmI CTRYAG 2 cut(s) 792, 1320
BisI GCNGC 8 cut(s) 265, 349, 591, 758, 761, 1071, 1119, 1416
BlsI GCNGC 8 cut(s) 266, 350, 592, 759, 762, 1072, 1120, 1417
BmcAI AGTACT 1 cut(s) 1474
Bme1390I CCNGG 3 cut(s) 135, 544, 1459
Bme18I GGWCC 2 cut(s) 238, 851
BmeT110I CYCGRG 3 cut(s) 338, 772, 890
BmgT120I GGNCC 2 cut(s) 238, 851
BmiI GGNNCC 3 cut(s) 66, 239, 853
BmrFI CCNGG 3 cut(s) 135, 544, 1459
BmsI GCATC 3 cut(s) 142, 571, 905
BpiI GAAGAC 1 cut(s) 969
BplI GAGNNNNNCTC 4 cut(s) 434, 466, 950, 982
BpmI CTGGAG 1 cut(s) 126
Bpu10I CCTNAGC 1 cut(s) 778
Bpu14I TTCGAA 1 cut(s) 316
BpuEI CTTGAG 2 cut(s) 98, 1273
BpuMI CCSGG 2 cut(s) 135, 1459
BsaHI GRCGYC 2 cut(s) 830, 1107
BsaI GGTCTC 2 cut(s) 375, 1325
BsaJI CCNNGG 2 cut(s) 278, 891
BsaWI WCCGGW 2 cut(s) 389, 989
Bse1I ACTGG 3 cut(s) 469, 871, 1387
BseAI TCCGGA 1 cut(s) 989
BseBI CCWGG 1 cut(s) 544
BseDI CCNNGG 2 cut(s) 278, 891
BseGI GGATG 1 cut(s) 723
BseMII CTCAG 1 cut(s) 792
BseNI ACTGG 3 cut(s) 469, 871, 1387
BseRI GAGGAG 1 cut(s) 971
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 5 cut(s) 335, 769, 772, 1057, 1427
BsgI GTGCAG 1 cut(s) 1434
Bsh1236I CGCG 1 cut(s) 264
Bsh1285I CGRYCG 1 cut(s) 1053
BshFI GGCC 2 cut(s) 191, 267
BsiEI CGRYCG 1 cut(s) 1053
BsiHKAI GWGCWC 2 cut(s) 357, 1010
BsiHKCI CYCGRG 3 cut(s) 338, 772, 890
BsiSI CCGG 6 cut(s) 107, 135, 390, 990, 1115, 1459
BslFI GGGAC 5 cut(s) 157, 251, 517, 960, 1237
BsmAI GTCTC 3 cut(s) 375, 1212, 1325
BsmBI CGTCTC 1 cut(s) 1212
BsmFI GGGAC 5 cut(s) 157, 251, 517, 960, 1237
BsnI GGCC 2 cut(s) 191, 267
Bso31I GGTCTC 2 cut(s) 375, 1325
BsoBI CYCGRG 3 cut(s) 338, 772, 890
Bsp119I TTCGAA 1 cut(s) 316
Bsp1286I GDGCHC 4 cut(s) 357, 376, 779, 1010
Bsp13I TCCGGA 1 cut(s) 989
Bsp143I GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
Bsp19I CCATGG 1 cut(s) 278
BspACI CCGC 5 cut(s) 264, 501, 590, 1053, 1118
BspANI GGCC 2 cut(s) 191, 267
BspCNI CTCAG 1 cut(s) 791
BspEI TCCGGA 1 cut(s) 989
BspFNI CGCG 1 cut(s) 264
BspHI TCATGA 2 cut(s) 654, 1131
BspLI GGNNCC 3 cut(s) 66, 239, 853
BspMAI CTGCAG 1 cut(s) 796
BspPI GGATC 4 cut(s) 140, 670, 1090, 1455
BspQI GCTCTTC 1 cut(s) 338
BspT104I TTCGAA 1 cut(s) 316
BspTNI GGTCTC 2 cut(s) 375, 1325
BsrI ACTGG 3 cut(s) 469, 871, 1387
BssECI CCNNGG 2 cut(s) 278, 891
BssMI GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
BssNI GRCGYC 2 cut(s) 830, 1107
BssSI CACGAG 1 cut(s) 359
BssT1I CCWWGG 1 cut(s) 278
Bst2BI CACGAG 1 cut(s) 359
Bst2UI CCWGG 1 cut(s) 544
Bst4CI ACNGT 4 cut(s) 422, 527, 1324, 1466
Bst6I CTCTTC 4 cut(s) 338, 862, 1144, 1334
BstACI GRCGYC 2 cut(s) 830, 1107
BstAPI GCANNNNNTGC 1 cut(s) 498
BstBI TTCGAA 1 cut(s) 316
BstC8I GCNNGC 2 cut(s) 353, 1303
BstDEI CTNAG 3 cut(s) 778, 802, 1488
BstDSI CCRYGG 1 cut(s) 278
BstEII GGTNACC 1 cut(s) 782
BstF5I GGATG 1 cut(s) 723
BstFNI CGCG 1 cut(s) 264
BstHHI GCGC 1 cut(s) 605
BstKTI GATC 6 cut(s) 148, 299, 665, 1085, 1266, 1450
BstMAI GTCTC 3 cut(s) 375, 1212, 1325
BstMBI GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
BstMCI CGRYCG 1 cut(s) 1053
BstMWI GCNNNNNNNGC 8 cut(s) 216, 225, 361, 447, 498, 590, 1101, 1424
BstNI CCWGG 1 cut(s) 544
BstNSI RCATGY 1 cut(s) 1045
BstPI GGTNACC 1 cut(s) 782
BstSCI CCNGG 3 cut(s) 133, 542, 1457
BstSFI CTRYAG 2 cut(s) 792, 1320
BstSLI GKGCMC 1 cut(s) 357
BstUI CGCG 1 cut(s) 264
BstV1I GCAGC 5 cut(s) 335, 769, 772, 1057, 1427
BstV2I GAAGAC 1 cut(s) 969
BstX2I RGATCY 3 cut(s) 145, 662, 1082
BstYI RGATCY 3 cut(s) 145, 662, 1082
BsuRI GGCC 2 cut(s) 191, 267
BtgI CCRYGG 1 cut(s) 278
BtsCI GGATG 1 cut(s) 723
BtsIMutI CAGTG 2 cut(s) 878, 1329
Cac8I GCNNGC 2 cut(s) 353, 1303
CciI TCATGA 2 cut(s) 654, 1131
CfoI GCGC 1 cut(s) 605
Cfr13I GGNCC 2 cut(s) 238, 851
CseI GACGC 2 cut(s) 270, 819
Csp6I GTAC 4 cut(s) 460, 1388, 1462, 1473
CviAII CATG 5 cut(s) 279, 655, 1042, 1132, 1282
CviQI GTAC 4 cut(s) 460, 1388, 1462, 1473
DdeI CTNAG 3 cut(s) 778, 802, 1488
DpnI GATC 6 cut(s) 147, 298, 664, 1084, 1265, 1449
DpnII GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
DraI TTTAAA 1 cut(s) 981
EaeI YGGCCR 2 cut(s) 189, 265
Eam1104I CTCTTC 4 cut(s) 338, 862, 1144, 1334
EarI CTCTTC 4 cut(s) 338, 862, 1144, 1334
Ecl136II GAGCTC 1 cut(s) 1008
Eco130I CCWWGG 1 cut(s) 278
Eco24I GRGCYC 3 cut(s) 376, 779, 1010
Eco31I GGTCTC 2 cut(s) 375, 1325
Eco47I GGWCC 2 cut(s) 238, 851
Eco53kI GAGCTC 1 cut(s) 1008
Eco57I CTGAAG 2 cut(s) 391, 615
Eco88I CYCGRG 3 cut(s) 338, 772, 890
Eco91I GGTNACC 1 cut(s) 782
EcoICRI GAGCTC 1 cut(s) 1008
EcoO65I GGTNACC 1 cut(s) 782
EcoRI GAATTC 1 cut(s) 767
EcoRII CCWGG 1 cut(s) 542
EcoT14I CCWWGG 1 cut(s) 278
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 3 cut(s) 376, 779, 1010
ErhI CCWWGG 1 cut(s) 278
Esp3I CGTCTC 1 cut(s) 1212
FaeI CATG 5 cut(s) 282, 658, 1045, 1135, 1285
FalI AAGNNNNNCTT 5 cut(s) 38, 389, 421, 1331, 1363
FaqI GGGAC 5 cut(s) 157, 251, 517, 960, 1237
FatI CATG 5 cut(s) 278, 654, 1041, 1131, 1281
FauI CCCGC 1 cut(s) 494
FblI GTMKAC 2 cut(s) 327, 938
Fnu4HI GCNGC 8 cut(s) 265, 349, 591, 758, 761, 1071, 1119, 1416
FokI GGATG 1 cut(s) 710
FriOI GRGCYC 3 cut(s) 376, 779, 1010
Fsp4HI GCNGC 8 cut(s) 265, 349, 591, 758, 761, 1071, 1119, 1416
FspBI CTAG 7 cut(s) 81, 507, 648, 1034, 1298, 1409, 1476
GlaI GCGC 1 cut(s) 604
GluI GCNGC 8 cut(s) 265, 349, 591, 758, 761, 1071, 1119, 1416
GsuI CTGGAG 1 cut(s) 126
HaeIII GGCC 2 cut(s) 191, 267
HapII CCGG 6 cut(s) 107, 135, 390, 990, 1115, 1459
HgaI GACGC 2 cut(s) 270, 819
HhaI GCGC 1 cut(s) 605
Hin1I GRCGYC 2 cut(s) 830, 1107
Hin1II CATG 5 cut(s) 282, 658, 1045, 1135, 1285
Hin6I GCGC 1 cut(s) 603
HinP1I GCGC 1 cut(s) 603
HincII GTYRAC 2 cut(s) 799, 939
HindII GTYRAC 2 cut(s) 799, 939
HinfI GANTC 6 cut(s) 313, 393, 913, 965, 1030, 1288
HpaII CCGG 6 cut(s) 107, 135, 390, 990, 1115, 1459
HphI GGTGA 5 cut(s) 248, 379, 434, 776, 1134
Hpy166II GTNNAC 5 cut(s) 328, 355, 799, 939, 1388
Hpy188I TCNGA 6 cut(s) 13, 75, 475, 851, 1029, 1367
Hpy8I GTNNAC 5 cut(s) 328, 355, 799, 939, 1388
Hpy99I CGWCG 3 cut(s) 264, 835, 1109
HpyAV CCTTC 4 cut(s) 284, 375, 1212, 1402
HpyCH4III ACNGT 4 cut(s) 422, 527, 1324, 1466
HpyCH4IV ACGT 2 cut(s) 330, 1107
HpyCH4V TGCA 9 cut(s) 155, 219, 250, 355, 584, 794, 823, 1063, 1415
HpyF10VI GCNNNNNNNGC 8 cut(s) 216, 225, 361, 447, 498, 590, 1101, 1424
HpyF3I CTNAG 3 cut(s) 778, 802, 1488
HpySE526I ACGT 2 cut(s) 330, 1107
Hsp92I GRCGYC 2 cut(s) 830, 1107
Hsp92II CATG 5 cut(s) 282, 658, 1045, 1135, 1285
HspAI GCGC 1 cut(s) 603
Kpn2I TCCGGA 1 cut(s) 989
Kzo9I GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
LguI GCTCTTC 1 cut(s) 338
LmnI GCTCC 1 cut(s) 64
Lsp1109I GCAGC 5 cut(s) 335, 769, 772, 1057, 1427
LweI GCATC 3 cut(s) 142, 571, 905
MaeI CTAG 7 cut(s) 81, 507, 648, 1034, 1298, 1409, 1476
MaeII ACGT 2 cut(s) 330, 1107
MaeIII GTNAC 4 cut(s) 521, 782, 1037, 1378
MalI GATC 6 cut(s) 147, 298, 664, 1084, 1265, 1449
MboI GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
MflI RGATCY 3 cut(s) 145, 662, 1082
MhlI GDGCHC 4 cut(s) 357, 376, 779, 1010
MlsI TGGCCA 1 cut(s) 191
MluCI AATT 5 cut(s) 127, 767, 976, 982, 1420
MluNI TGGCCA 1 cut(s) 191
MlyI GAGTC 2 cut(s) 959, 1039
MmeI TCCRAC 1 cut(s) 772
Mox20I TGGCCA 1 cut(s) 191
Mph1103I ATGCAT 1 cut(s) 586
MroI TCCGGA 1 cut(s) 989
MroXI GAANNNNTTC 2 cut(s) 312, 404
MscI TGGCCA 1 cut(s) 191
MseI TTAA 4 cut(s) 639, 932, 980, 1349
Msp20I TGGCCA 1 cut(s) 191
MspI CCGG 6 cut(s) 107, 135, 390, 990, 1115, 1459
MspR9I CCNGG 3 cut(s) 135, 544, 1459
MvaI CCWGG 1 cut(s) 544
MvnI CGCG 1 cut(s) 264
MwoI GCNNNNNNNGC 8 cut(s) 216, 225, 361, 447, 498, 590, 1101, 1424
NciI CCSGG 2 cut(s) 135, 1459
NcoI CCATGG 1 cut(s) 278
NdeII GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
NlaIII CATG 5 cut(s) 282, 658, 1045, 1135, 1285
NlaIV GGNNCC 3 cut(s) 66, 239, 853
NmuCI GTSAC 3 cut(s) 521, 782, 1037
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 1 cut(s) 1045
NspV TTCGAA 1 cut(s) 316
PagI TCATGA 2 cut(s) 654, 1131
PciI ACATGT 1 cut(s) 1041
PciSI GCTCTTC 1 cut(s) 338
PcsI WCGNNNNNNNCGW 2 cut(s) 336, 1001
PdmI GAANNNNTTC 2 cut(s) 312, 404
PfeI GAWTC 4 cut(s) 313, 393, 913, 1288
PflFI GACNNNGTC 1 cut(s) 1228
PfoI TCCNGGA 1 cut(s) 542
PkrI GCNGC 8 cut(s) 266, 350, 592, 759, 762, 1072, 1120, 1417
PleI GAGTC 2 cut(s) 959, 1038
PpsI GAGTC 2 cut(s) 959, 1038
PscI ACATGT 1 cut(s) 1041
PshBI ATTAAT 2 cut(s) 639, 932
Psp124BI GAGCTC 1 cut(s) 1010
Psp6I CCWGG 1 cut(s) 542
PspEI GGTNACC 1 cut(s) 782
PspGI CCWGG 1 cut(s) 542
PspN4I GGNNCC 3 cut(s) 66, 239, 853
PspPI GGNCC 2 cut(s) 238, 851
PstI CTGCAG 1 cut(s) 796
PsuI RGATCY 3 cut(s) 145, 662, 1082
PsyI GACNNNGTC 1 cut(s) 1228
RsaI GTAC 4 cut(s) 461, 1389, 1463, 1474
RsaNI GTAC 4 cut(s) 460, 1388, 1462, 1473
SacI GAGCTC 1 cut(s) 1010
SalI GTCGAC 1 cut(s) 937
SapI GCTCTTC 1 cut(s) 338
SaqAI TTAA 4 cut(s) 639, 932, 980, 1349
SatI GCNGC 8 cut(s) 265, 349, 591, 758, 761, 1071, 1119, 1416
Sau3AI GATC 6 cut(s) 145, 296, 662, 1082, 1263, 1447
Sau96I GGNCC 2 cut(s) 238, 851
ScaI AGTACT 1 cut(s) 1474
SchI GAGTC 2 cut(s) 959, 1039
ScrFI CCNGG 3 cut(s) 135, 544, 1459
SduI GDGCHC 4 cut(s) 357, 376, 779, 1010
SfaNI GCATC 3 cut(s) 142, 571, 905
SfcI CTRYAG 2 cut(s) 792, 1320
SfuI TTCGAA 1 cut(s) 316
SinI GGWCC 2 cut(s) 238, 851
SmiI ATTTAAAT 1 cut(s) 981
SmlI CTYRAG 2 cut(s) 113, 1252
SmoI CTYRAG 2 cut(s) 113, 1252
SpeI ACTAGT 1 cut(s) 1475
Sse9I AATT 5 cut(s) 127, 767, 976, 982, 1420
SsiI CCGC 5 cut(s) 264, 501, 590, 1053, 1118
SspMI CTAG 7 cut(s) 81, 507, 648, 1034, 1298, 1409, 1476
SstI GAGCTC 1 cut(s) 1010
StyD4I CCNGG 3 cut(s) 133, 542, 1457
StyI CCWWGG 1 cut(s) 278
SwaI ATTTAAAT 1 cut(s) 981
TaaI ACNGT 4 cut(s) 422, 527, 1324, 1466
TaiI ACGT 2 cut(s) 333, 1110
TaqI TCGA 9 cut(s) 35, 299, 306, 316, 452, 920, 938, 1004, 1241
TaqII GACCGA 1 cut(s) 1349
TasI AATT 5 cut(s) 127, 767, 976, 982, 1420
TatI WGTACW 1 cut(s) 1472
TauI GCSGC 3 cut(s) 267, 593, 1121
TfiI GAWTC 4 cut(s) 313, 393, 913, 1288
Tru1I TTAA 4 cut(s) 639, 932, 980, 1349
Tru9I TTAA 4 cut(s) 639, 932, 980, 1349
TscAI CASTG 2 cut(s) 878, 1329
TseFI GTSAC 3 cut(s) 521, 782, 1037
TseI GCWGC 5 cut(s) 348, 757, 760, 1070, 1415
Tsp45I GTSAC 3 cut(s) 521, 782, 1037
TspDTI ATGAA 7 cut(s) 547, 643, 671, 1120, 1148, 1236, 1301
TspRI CASTG 2 cut(s) 878, 1329
Tth111I GACNNNGTC 1 cut(s) 1228
VneI GTGCAC 1 cut(s) 353
VpaK11BI GGWCC 2 cut(s) 238, 851
VspI ATTAAT 2 cut(s) 639, 932
XapI RAATTY 5 cut(s) 127, 767, 976, 982, 1420
XceI RCATGY 1 cut(s) 1045
XmiI GTMKAC 2 cut(s) 327, 938
XmnI GAANNNNTTC 2 cut(s) 312, 404
XspI CTAG 7 cut(s) 81, 507, 648, 1034, 1298, 1409, 1476
ZraI GACGTC 1 cut(s) 1108
ZrmI AGTACT 1 cut(s) 1474
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.