FvH4_3g41930

galactinol--sucrose galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0012127
Physical Location & Seq
Reverse (-)
35090040 .. 35094424
4385 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g41930.t1

Sequence Viewer

Length: 2271 bp
ATGACGGTTGGGGCTGGAATAACAGTTGAAGATGGAAGTTTGATGGTGTTGGGGAACAAGGTGTTGGGTGAAGTGCATGACAACGTTTTTGTGACTCCGGCCTCCGGTGGCGCATTGGTCAATGGCGCCTTCATCGGAGTCGAGTCTGATCAGAAGGGTAGCCGGAGAGTGTTTCCGATCGGCAAGCTCGAGGGGTTGCGGTTTATGTGTGTATTTCGGTTTAAGATGTGGTGGATGACGCAGAGGATGGGGAGTAATGGTCAAGATCTGCCGTTTGAGACTCAGTTTTTGATTGTGGAGACAAAGGAAGGTGGTCATTTTGGTGAGGGAAGCAAAAATGGAGGGGAGGAATCTGCTGTGTACACGGTTTTCTTGCCGATTCTTGAGGGGGATTTCAGGGCTGTTCTTCAGGGGAATGAACGTAATGAGATTGAAATCTGCCTAGAAAGTGGAGATCCTGATGTTGATGGATTTGAGGGTAGTCATTTGGTTTTTGTTGGGGCTGGATCAGACCCATTTGATGTCATCACAGATACTGTCAAGACTGTGGAGAAGCATTTACAGACATTTCATCATCGTGAGCGAAAGAAGATGCCAGACATGTTGAACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGATGTCACTTCAGAGGGTCTAAAGCAAGGGTTAGAGAGCTTTGAAAATGGTGGAGTCCCTCCAAAGTTTGTTATTATCGATGATGGGTGGCAATCAGTTAGTATGGATTCCACTGGTGTTGGCTTCTTAGCTGATAACACAGCAAACTTTGCAAACAGATTGACAAATATAAAAGAGAATCACAAATTTCAAAAAGATGGTAAAGAGGGTCACAGAGTAGAGGATCCATCTTTGGGCCTTCGCCACATTGTATCTGAAATTAAGGAAAAACATGCCTTGAAGTATGCTTATGTGTGGCATGCTATAACTGGTTACTGGGGTGGAGTTCGACCAGGTGTTTCCGAAATGGAACACTATGACTCCAAGTTGGCCTTCCCTGTTTCATCTCCAGGGGTTGAGTCCAATGAGCCTTGTGATGCCTTTAACAGCATTGCCAAAAATGGCCTTGGCCTTGTGAATCCTGAGAAAGTTTTCCACTTCTATGATGAGCTCCACTCTTATCTTGCATCAGCAGGAATTGATGGGGTTAAAGTTGATGTTCAAAACATTCTTGAAACTTTAGGGGCAGGCCATGGTGGAAGGGTGAAACTTGCAAGAAAATACCATCAGGCATTAGAAGCGTCTATTGCAAGAAACTTTCCTGACAATGGTATCATTTCTTGTATGAGCCACAATACAGACGGTTTATACAGTGCGAAGAGGTCAGCTGTTATAAGGGCATCAGATGATTTCTGGCCTCGAGATCCTGCATCACACACAATTCATATTGCATCAGTTGCTTATAACACTGTTTTTCTTGGAGAATTCATGCAGCCAGATTGGGATATGTTTCATAGCTTACACCCGATGGCTGAATATCATGGAGCAGCTCGTGCAGTAGGAGGATGTGCAATTTATGTCAGTGACAAGCCTGGGCAGCATGACTTCGATCTTCTAAGGAAGCTTGTACTCACTGATGGCTCTATCTTGAGGGCTAAACTACCAGGAAGACCAACAAGGGATTGCTTATTCTCTGATCCTGCTCGAGATGGGAAAAGTCTTCTAAAGATATGGAATCTGAATGATTTTACCGGAGTTGTGGGAGTCTTTAACTGCCAGGGAGCTGGCTGGTGTAAGGTTGGAAAGACGAACCTCATCCATGACCTAGAGCCAGGCACAGTTACCGGGGTTATCAGGGCTAAAGATGTCGATTTTCTGCCCAAGGTTGCACATGAGAAATGGACTGGGGATGCTGTCATATATTCCCATCTTGGTGGAGAGGTGATATATCTTCCCAAGGATGCATCTCGGCCAGTTACCCTGAAATCCCGAGAGTATGAAGTTTTTACAGTGGTTCCTGCTAAGAAATTGTCTGATGGTGTAACATTTGCTCCCATCGGCCTAATCAAGATGTTCAACTCTGGAGGAGCCATAAAAGAATATGAATCTAAAAGCAGTACAACAGTTGACATGAAAGTTCATGGGTCTGGCCTATTCGGAGCCTATTCATCAGCTAGACCAAAGAGGATAACAGTTGATTCGGAGGAAACTGAGTTCGGATATGAAGTTGAATCGGGTTTGCTCACCATTGACTTGAGAGTTCCAGAGAAAGAATTGTACTTTTGGAACATCACCATTGAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

757

Amino Acids

83.35

Weight (kDa)

5.63

Isoelectric Point (pI)

33.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 7 - 739 0.0 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012127)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55740
fragaria_vesca FvH4_3g41930 FvH4_3g41930 FvH4_3g41930
malus_domestica MD03G1040100.v1.1 MD11G1041500.v1.1
prunus_persica Prupe.6G032400_v2.0.a1 Prupe.6G032400_v2.0.a1
pyrus_communis pycom03g03080 pycom11g03510
rosa_chinensis RchiOBHm_Chr5g0075141
rosa_laevigata RLG00000036533
rosa_multiflora Rmu_ssc0000217.1_g000009
rosa_roxburghii Rroxscaffold_1G00006480
rosa_rugosa Rorug05G0436500
rosa_samantha Rh5AG493800 Rh5CG539100 Rh5DG527900
rosa_wichuraiana Rw5G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1358, 1428
AccB1I GGYRCC 1 cut(s) 125
AciI CCGC 1 cut(s) 199
AclI AACGTT 1 cut(s) 84
AclWI GGATC 6 cut(s) 449, 514, 863, 876, 1382, 1655
AcoI YGGCCR 1 cut(s) 1934
AcsI RAATTY 2 cut(s) 830, 1448
AcuI CTGAAG 2 cut(s) 392, 639
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 5 cut(s) 362, 625, 1593, 2083, 2243
AfiI CCNNNNNNNGG 3 cut(s) 104, 878, 1292
AflIII ACRYGT 1 cut(s) 600
AjnI CCWGG 6 cut(s) 976, 1033, 1555, 1627, 1740, 1795
AjuI GAANNNNNNNTTGG 4 cut(s) 47, 79, 1001, 1033
AloI GAACNNNNNNTCC 2 cut(s) 2162, 2194
Alw21I GWGCWC 1 cut(s) 1137
Alw26I GTCTC 2 cut(s) 272, 293
AlwI GGATC 6 cut(s) 449, 514, 863, 876, 1382, 1655
AlwNI CAGNNNCTG 1 cut(s) 536
Ama87I CYCGRG 4 cut(s) 188, 1383, 1668, 1953
ApeKI GCWGC 3 cut(s) 1456, 1511, 1561
ApoI RAATTY 2 cut(s) 830, 1448
ArsI GACNNNNNNTTYG 4 cut(s) 71, 103, 271, 303
Asp700I GAANNNNTTC 1 cut(s) 1115
AspLEI GCGC 2 cut(s) 113, 128
AspS9I GGNCC 1 cut(s) 880
AsuC2I CCSGG 1 cut(s) 1810
AsuHPI GGTGA 6 cut(s) 80, 335, 1240, 1918, 2200, 2248
AvaI CYCGRG 4 cut(s) 188, 1383, 1668, 1953
BaeI ACNNNNGTAYC 2 cut(s) 1279, 1312
BamHI GGATCC 1 cut(s) 868
BanI GGYRCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 1137
BauI CACGAG 1 cut(s) 1515
BbsI GAAGAC 2 cut(s) 1639, 1676
Bbv12I GWGCWC 1 cut(s) 1137
BbvI GCAGC 3 cut(s) 1468, 1523, 1573
BceAI ACGGC 1 cut(s) 256
BciT130I CCWGG 6 cut(s) 978, 1035, 1557, 1629, 1742, 1797
BclI TGATCA 1 cut(s) 148
BcnI CCSGG 1 cut(s) 1810
BcoDI GTCTC 2 cut(s) 272, 293
BfaI CTAG 3 cut(s) 443, 1790, 2139
BfoI RGCGCY 1 cut(s) 129
BglII AGATCT 1 cut(s) 265
BisI GCNGC 3 cut(s) 1457, 1512, 1562
BlsI GCNGC 3 cut(s) 1458, 1513, 1563
Bme1390I CCNGG 7 cut(s) 978, 1035, 1557, 1629, 1742, 1797, 1810
BmeT110I CYCGRG 4 cut(s) 188, 1383, 1668, 1953
BmgT120I GGNCC 1 cut(s) 880
BmiI GGNNCC 5 cut(s) 127, 870, 1980, 2053, 2125
BmrFI CCNGG 7 cut(s) 978, 1035, 1557, 1629, 1742, 1797, 1810
BmrI ACTGGG 2 cut(s) 970, 1878
BmuI ACTGGG 2 cut(s) 970, 1878
BpiI GAAGAC 2 cut(s) 1639, 1676
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
BpmI CTGGAG 2 cut(s) 1017, 2067
BpuEI CTTGAG 3 cut(s) 404, 1633, 2239
BpuMI CCSGG 1 cut(s) 1810
Bsa29I ATCGAT 1 cut(s) 723
BsaBI GATNNNNATC 1 cut(s) 434
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 8 cut(s) 1034, 1090, 1216, 1556, 1741, 1809, 1845, 1920
BsaWI WCCGGW 2 cut(s) 104, 1715
BsaXI ACNNNNNCTCC 6 cut(s) 244, 274, 989, 1019, 1999, 2029
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 878, 1292
Bse1I ACTGG 6 cut(s) 614, 763, 958, 965, 1873, 1937
Bse3DI GCAATG 1 cut(s) 1074
Bse8I GATNNNNATC 1 cut(s) 434
BseBI CCWGG 6 cut(s) 978, 1035, 1557, 1629, 1742, 1797
BseCI ATCGAT 1 cut(s) 723
BseDI CCNNGG 8 cut(s) 1034, 1090, 1216, 1556, 1741, 1809, 1845, 1920
BseGI GGATG 7 cut(s) 240, 252, 637, 1535, 1779, 1879, 1930
BseJI GATNNNNATC 1 cut(s) 434
BseLI CCNNNNNNNGG 3 cut(s) 104, 878, 1292
BseMI GCAATG 1 cut(s) 1074
BseMII CTCAG 3 cut(s) 296, 1098, 2166
BseNI ACTGG 6 cut(s) 614, 763, 958, 965, 1873, 1937
BseRI GAGGAG 1 cut(s) 2064
BseXI GCAGC 3 cut(s) 1468, 1523, 1573
BsgI GTGCAG 1 cut(s) 1539
Bsh1285I CGRYCG 1 cut(s) 180
BshNI GGYRCC 1 cut(s) 125
BshVI ATCGAT 1 cut(s) 723
BsiEI CGRYCG 1 cut(s) 180
BsiHKAI GWGCWC 1 cut(s) 1137
BsiHKCI CYCGRG 4 cut(s) 188, 1383, 1668, 1953
BsiSI CCGG 5 cut(s) 98, 105, 163, 1716, 1809
BslFI GGGAC 1 cut(s) 686
BslI CCNNNNNNNGG 3 cut(s) 104, 878, 1292
BsmAI GTCTC 2 cut(s) 272, 293
BsmFI GGGAC 1 cut(s) 686
BsoBI CYCGRG 4 cut(s) 188, 1383, 1668, 1953
Bsp1286I GDGCHC 1 cut(s) 1137
Bsp1407I TGTACA 2 cut(s) 360, 623
Bsp143I GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
Bsp19I CCATGG 1 cut(s) 1216
BspACI CCGC 1 cut(s) 199
BspCNI CTCAG 3 cut(s) 295, 1099, 2167
BspDI ATCGAT 1 cut(s) 723
BspLI GGNNCC 5 cut(s) 127, 870, 1980, 2053, 2125
BspPI GGATC 6 cut(s) 449, 514, 863, 876, 1382, 1655
BspT107I GGYRCC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 1074
BsrGI TGTACA 2 cut(s) 360, 623
BsrI ACTGG 6 cut(s) 614, 763, 958, 965, 1873, 1937
BssECI CCNNGG 8 cut(s) 1034, 1090, 1216, 1556, 1741, 1809, 1845, 1920
BssMI GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
BssNI GRCGYC 1 cut(s) 126
BssSI CACGAG 1 cut(s) 1515
BssT1I CCWWGG 4 cut(s) 1090, 1216, 1845, 1920
Bst2BI CACGAG 1 cut(s) 1515
Bst2UI CCWGG 6 cut(s) 978, 1035, 1557, 1629, 1742, 1797
Bst6I CTCTTC 1 cut(s) 1337
BstACI GRCGYC 1 cut(s) 126
BstAPI GCANNNNNTGC 3 cut(s) 794, 1421, 1517
BstAUI TGTACA 2 cut(s) 360, 623
BstC8I GCNNGC 4 cut(s) 185, 945, 1213, 1750
BstDEI CTNAG 6 cut(s) 282, 772, 1107, 1580, 1986, 2175
BstDSI CCRYGG 1 cut(s) 1216
BstF5I GGATG 7 cut(s) 240, 252, 637, 1535, 1779, 1879, 1930
BstH2I RGCGCY 1 cut(s) 129
BstHHI GCGC 2 cut(s) 113, 128
BstKTI GATC 9 cut(s) 151, 180, 268, 457, 509, 871, 1390, 1576, 1663
BstMAI GTCTC 2 cut(s) 272, 293
BstMBI GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
BstMCI CGRYCG 1 cut(s) 180
BstMWI GCNNNNNNNGC 6 cut(s) 794, 1262, 1271, 1421, 1517, 1561
BstNI CCWGG 6 cut(s) 978, 1035, 1557, 1629, 1742, 1797
BstNSI RCATGY 3 cut(s) 604, 920, 947
BstSCI CCNGG 7 cut(s) 976, 1033, 1555, 1627, 1740, 1795, 1808
BstV1I GCAGC 3 cut(s) 1468, 1523, 1573
BstV2I GAAGAC 2 cut(s) 1639, 1676
BstX2I RGATCY 4 cut(s) 265, 454, 868, 1387
BstXI CCANNNNNNTGG 2 cut(s) 1748, 1898
BstYI RGATCY 4 cut(s) 265, 454, 868, 1387
Bsu15I ATCGAT 1 cut(s) 723
BsuTUI ATCGAT 1 cut(s) 723
BtgI CCRYGG 1 cut(s) 1216
BtsCI GGATG 7 cut(s) 240, 252, 637, 1535, 1779, 1879, 1930
BtsIMutI CAGTG 6 cut(s) 756, 1342, 1431, 1552, 1596, 1980
Cac8I GCNNGC 4 cut(s) 185, 945, 1213, 1750
CaiI CAGNNNCTG 1 cut(s) 536
CfoI GCGC 2 cut(s) 113, 128
Cfr13I GGNCC 1 cut(s) 880
ClaI ATCGAT 1 cut(s) 723
CseI GACGC 2 cut(s) 247, 1254
CsiI ACCWGGT 1 cut(s) 976
Csp6I GTAC 5 cut(s) 361, 624, 1592, 2082, 2242
CspCI CAANNNNNGTGG 2 cut(s) 745, 780
CviQI GTAC 5 cut(s) 361, 624, 1592, 2082, 2242
DdeI CTNAG 6 cut(s) 282, 772, 1107, 1580, 1986, 2175
DinI GGCGCC 1 cut(s) 127
DpnI GATC 9 cut(s) 150, 179, 267, 456, 508, 870, 1389, 1575, 1662
DpnII GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
EaeI YGGCCR 1 cut(s) 1934
Eam1104I CTCTTC 1 cut(s) 1337
EarI CTCTTC 1 cut(s) 1337
Ecl136II GAGCTC 1 cut(s) 1135
Eco130I CCWWGG 4 cut(s) 1090, 1216, 1845, 1920
Eco24I GRGCYC 1 cut(s) 1137
Eco53kI GAGCTC 1 cut(s) 1135
Eco57I CTGAAG 2 cut(s) 392, 639
Eco88I CYCGRG 4 cut(s) 188, 1383, 1668, 1953
EcoICRI GAGCTC 1 cut(s) 1135
EcoRI GAATTC 1 cut(s) 1448
EcoRII CCWGG 6 cut(s) 976, 1033, 1555, 1627, 1740, 1795
EcoT14I CCWWGG 4 cut(s) 1090, 1216, 1845, 1920
EcoT22I ATGCAT 1 cut(s) 1930
EcoT38I GRGCYC 1 cut(s) 1137
EgeI GGCGCC 1 cut(s) 127
EheI GGCGCC 1 cut(s) 127
ErhI CCWWGG 4 cut(s) 1090, 1216, 1845, 1920
FalI AAGNNNNNCTT 2 cut(s) 1001, 1033
FaqI GGGAC 1 cut(s) 686
FbaI TGATCA 1 cut(s) 148
Fnu4HI GCNGC 3 cut(s) 1457, 1512, 1562
FokI GGATG 7 cut(s) 247, 259, 644, 1542, 1766, 1886, 1937
FriOI GRGCYC 1 cut(s) 1137
Fsp4HI GCNGC 3 cut(s) 1457, 1512, 1562
FspBI CTAG 3 cut(s) 443, 1790, 2139
GlaI GCGC 2 cut(s) 112, 127
GluI GCNGC 3 cut(s) 1457, 1512, 1562
GsuI CTGGAG 2 cut(s) 1017, 2067
HaeII RGCGCY 1 cut(s) 129
HapII CCGG 5 cut(s) 98, 105, 163, 1716, 1809
HgaI GACGC 2 cut(s) 247, 1254
HhaI GCGC 2 cut(s) 113, 128
Hin1I GRCGYC 1 cut(s) 126
Hin6I GCGC 2 cut(s) 111, 126
HinP1I GCGC 2 cut(s) 111, 126
HincII GTYRAC 1 cut(s) 2092
HindII GTYRAC 1 cut(s) 2092
HindIII AAGCTT 1 cut(s) 1586
HpaII CCGG 5 cut(s) 98, 105, 163, 1716, 1809
HphI GGTGA 6 cut(s) 80, 335, 1240, 1918, 2200, 2248
Hpy166II GTNNAC 4 cut(s) 361, 363, 624, 2092
Hpy8I GTNNAC 4 cut(s) 361, 363, 624, 2092
HpyAV CCTTC 6 cut(s) 139, 148, 302, 893, 1027, 1218
HpyCH4IV ACGT 2 cut(s) 84, 421
HpyF10VI GCNNNNNNNGC 6 cut(s) 794, 1262, 1271, 1421, 1517, 1561
HpyF3I CTNAG 6 cut(s) 282, 772, 1107, 1580, 1986, 2175
HpySE526I ACGT 2 cut(s) 84, 421
Hsp92I GRCGYC 1 cut(s) 126
HspAI GCGC 2 cut(s) 111, 126
KasI GGCGCC 1 cut(s) 125
Ksp22I TGATCA 1 cut(s) 148
Kzo9I GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
LmnI GCTCC 6 cut(s) 1140, 1508, 1745, 2020, 2051, 2123
Lsp1109I GCAGC 3 cut(s) 1468, 1523, 1573
MabI ACCWGGT 1 cut(s) 976
MaeI CTAG 3 cut(s) 443, 1790, 2139
MaeII ACGT 2 cut(s) 84, 421
MaeIII GTNAC 8 cut(s) 91, 649, 854, 956, 1547, 1804, 1939, 2005
MalI GATC 9 cut(s) 150, 179, 267, 456, 508, 870, 1389, 1575, 1662
MboI GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
MboII GAAGA 8 cut(s) 41, 398, 601, 1354, 1568, 1644, 1676, 1907
MflI RGATCY 4 cut(s) 265, 454, 868, 1387
MhlI GDGCHC 1 cut(s) 1137
MluCI AATT 8 cut(s) 830, 903, 1161, 1404, 1448, 1536, 1991, 2237
Mly113I GGCGCC 1 cut(s) 126
MlyI GAGTC 8 cut(s) 88, 147, 152, 274, 708, 998, 1052, 1737
MmeI TCCRAC 1 cut(s) 1744
Mph1103I ATGCAT 1 cut(s) 1930
MroXI GAANNNNTTC 1 cut(s) 1115
MseI TTAA 5 cut(s) 222, 906, 1068, 1173, 1734
MslI CAYNNNNRTG 4 cut(s) 321, 576, 1125, 1896
MspA1I CMGCKG 1 cut(s) 1352
MspI CCGG 5 cut(s) 98, 105, 163, 1716, 1809
MspR9I CCNGG 7 cut(s) 978, 1035, 1557, 1629, 1742, 1797, 1810
MvaI CCWGG 6 cut(s) 978, 1035, 1557, 1629, 1742, 1797
MwoI GCNNNNNNNGC 6 cut(s) 794, 1262, 1271, 1421, 1517, 1561
NarI GGCGCC 1 cut(s) 126
NciI CCSGG 1 cut(s) 1810
NcoI CCATGG 1 cut(s) 1216
NdeII GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
NlaIV GGNNCC 5 cut(s) 127, 870, 1980, 2053, 2125
NmeAIII GCCGAG 1 cut(s) 1912
NmuCI GTSAC 4 cut(s) 91, 649, 854, 1547
NsiI ATGCAT 1 cut(s) 1930
NspI RCATGY 3 cut(s) 604, 920, 947
PaeI GCATGC 1 cut(s) 947
PaeR7I CTCGAG 3 cut(s) 188, 1383, 1668
PciI ACATGT 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PdmI GAANNNNTTC 1 cut(s) 1115
PfeI GAWTC 9 cut(s) 350, 379, 752, 823, 1102, 1699, 2069, 2162, 2195
PkrI GCNGC 3 cut(s) 1458, 1513, 1563
Ple19I CGATCG 1 cut(s) 180
PleI GAGTC 8 cut(s) 88, 146, 151, 274, 707, 998, 1051, 1736
PluTI GGCGCC 1 cut(s) 129
PpsI GAGTC 8 cut(s) 88, 146, 151, 274, 707, 998, 1051, 1736
PscI ACATGT 1 cut(s) 600
PsiI TTATAA 2 cut(s) 1358, 1428
Psp124BI GAGCTC 1 cut(s) 1137
Psp1406I AACGTT 1 cut(s) 84
Psp6I CCWGG 6 cut(s) 976, 1033, 1555, 1627, 1740, 1795
PspGI CCWGG 6 cut(s) 976, 1033, 1555, 1627, 1740, 1795
PspN4I GGNNCC 5 cut(s) 127, 870, 1980, 2053, 2125
PspPI GGNCC 1 cut(s) 880
PspXI VCTCGAGB 1 cut(s) 188
PstNI CAGNNNCTG 1 cut(s) 536
PsuI RGATCY 4 cut(s) 265, 454, 868, 1387
PvuI CGATCG 1 cut(s) 180
PvuII CAGCTG 1 cut(s) 1352
RsaI GTAC 5 cut(s) 362, 625, 1593, 2083, 2243
RsaNI GTAC 5 cut(s) 361, 624, 1592, 2082, 2242
RseI CAYNNNNRTG 4 cut(s) 321, 576, 1125, 1896
SacI GAGCTC 1 cut(s) 1137
SaqAI TTAA 5 cut(s) 222, 906, 1068, 1173, 1734
SatI GCNGC 3 cut(s) 1457, 1512, 1562
Sau3AI GATC 9 cut(s) 148, 177, 265, 454, 506, 868, 1387, 1573, 1660
Sau96I GGNCC 1 cut(s) 880
SchI GAGTC 8 cut(s) 88, 147, 152, 274, 708, 998, 1052, 1737
ScrFI CCNGG 7 cut(s) 978, 1035, 1557, 1629, 1742, 1797, 1810
SduI GDGCHC 1 cut(s) 1137
SexAI ACCWGGT 1 cut(s) 976
SfoI GGCGCC 1 cut(s) 127
Sfr274I CTCGAG 3 cut(s) 188, 1383, 1668
SlaI CTCGAG 3 cut(s) 188, 1383, 1668
SmiMI CAYNNNNRTG 4 cut(s) 321, 576, 1125, 1896
SmlI CTYRAG 6 cut(s) 188, 383, 1383, 1612, 1668, 2218
SmoI CTYRAG 6 cut(s) 188, 383, 1383, 1612, 1668, 2218
SphI GCATGC 1 cut(s) 947
Sse9I AATT 8 cut(s) 830, 903, 1161, 1404, 1448, 1536, 1991, 2237
SsiI CCGC 1 cut(s) 199
SspDI GGCGCC 1 cut(s) 125
SspMI CTAG 3 cut(s) 443, 1790, 2139
SstI GAGCTC 1 cut(s) 1137
StyD4I CCNGG 7 cut(s) 976, 1033, 1555, 1627, 1740, 1795, 1808
StyI CCWWGG 4 cut(s) 1090, 1216, 1845, 1920
TaiI ACGT 2 cut(s) 87, 424
TaqI TCGA 8 cut(s) 141, 189, 723, 973, 1384, 1572, 1669, 1833
TasI AATT 8 cut(s) 830, 903, 1161, 1404, 1448, 1536, 1991, 2237
TatI WGTACW 5 cut(s) 360, 623, 1591, 2081, 2241
TfiI GAWTC 9 cut(s) 350, 379, 752, 823, 1102, 1699, 2069, 2162, 2195
Tru1I TTAA 5 cut(s) 222, 906, 1068, 1173, 1734
Tru9I TTAA 5 cut(s) 222, 906, 1068, 1173, 1734
TscAI CASTG 6 cut(s) 763, 1342, 1438, 1552, 1603, 1980
TseFI GTSAC 4 cut(s) 91, 649, 854, 1547
TseI GCWGC 3 cut(s) 1456, 1511, 1561
Tsp45I GTSAC 4 cut(s) 91, 649, 854, 1547
TspRI CASTG 6 cut(s) 763, 1342, 1438, 1552, 1603, 1980
XapI RAATTY 2 cut(s) 830, 1448
XceI RCATGY 3 cut(s) 604, 920, 947
XhoI CTCGAG 3 cut(s) 188, 1383, 1668
XmnI GAANNNNTTC 1 cut(s) 1115
XspI CTAG 3 cut(s) 443, 1790, 2139
Zsp2I ATGCAT 1 cut(s) 1930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.