Rh5DG527900

galactinol--sucrose galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0012127
Physical Location & Seq
Reverse (-)
81501606 .. 81506903
5298 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG527900.1

Sequence Viewer

Length: 1707 bp
ATGACGGTTGGGGCAGGAATAACCGTTGAAGATGGAAGTTTGATGGTGTTGGGGAACAAGGTGTTGGGTGAAGTGCGTGACAACGTTGTTGTAACCCCGGCCTCCGGCGGTGCATTGGCCAATGGGGCCTTCATCGGAGTTGAGTCTGATCAGAAGGGTAGCCGGAGAGTGTTTCCGATCGGTAAACTCGAGGGGTTGCGGTTTATGTGTGTATTTCGGTTTAAGATGTGGTGGATGACACAGAGGATGGGGAGTAGTGGTCAAGATGTGCCGTTTGAGACGCAGTTTTTGATTGTGGAGACCAAGGAAGGTGGTCATTTTGGTGAAGGAAGCAATACTGAAGGGGAGGAATCTGCTGTGTATACCGTTTTCTTGCCGATTCTCGAGGGGGATTTCAGGGCTGTTCTTCAGGGGAATGAACTGAATGAGATTGAAATCTGCCTAGAAAGTGGAGATCCTGATGTTGATGGATTTGAGGGTAGACATTTGGTTTTTGTTGGGGCTGGATCAGACCCATTTGAAGTCATCACAGATACTGTGAAGACTGTGGAGAAGCATTTACAGACATTTCATCATCGTGAGCGAAAGAAGATGCCAGACATGTTGAACTGGTTTGGCTGGTGTACATGGGATGCTTTCTACACTGATGTCACTTCAGAGGGTCTAAAGCAAGGGTTAGAGAGCTTCGAAAATGATGGAGTGCCTCCGAAGTTTGTTATTATTGATGATGGATGGCAATCAGTTAGTATGGATTCCACTGGTGTTGGCTTCCTAGCTGATAACACAGCAAACTTTGCAAACAGATTGACAAATATTAAAGAGAACCACAAATTTCAAAAAGATGGTAAAGAGGGTCACAGAGTAGAGGATCCATCTTTGGGCCTTCGCCACGTTGTATCTGAAATTAAAGAAAAACATGCTTTGAAGTATGCTTATGTGTGGCATGCTATAACTGGTTACTGGGGTGGTGTTAGACCTGGTGTTTCCGAAATGGAACACTACGATTCCAAGTTGGCCTACCCTGTTTCATCTCCAGGGGTTGAGTCCAATGAGCCCTGTGATGCCTTCAACAGCATTGCCAAAAATGGCCTTGGCCTTGTGAATCCTGAGAAAGTTTTCCACTTCTATGATGAGCTCCACTCTTATCTTGCATCAGCAGGAATTGATGGGGTTAAAGTTGATGTTCAAAACATTCTCGAAACTTTAGGGGCAGGTCATGGTGGAAGGGTGAAACTTGCAAGAAAATACCATCAGGCATTAGAAGCGTCTATTGCTAGAAACTTTCCTGACAATGGTATCATTTCTTGTATGAGCCACAACACAGATGGTTTATACAGTGCGAAGAGGACAGCTGTTATAAGGGCATCAGATGATTTTTGGCCTAGAGATCCTGCATCACACACAATTCATATTGCATCAGTTGCTTATAACACTGTTTTTCTTGGAGAATTCATGCAGCCAGATTGGGATATGTTTCATAGCTTACACCCGATGGCTGAATATCATGGAGCAGCTCGTGCGGTGGGAGGATGTGCAATTTATGTTAGTGACAAGCCTGGGCAGCATGACTTCAATCTTTTAAGGAAGCTTGTACTTACTGATGGCTCCATCTTGAGGGCTAAACTACCAGGAAGACCAACAAGGGATTGCTTATTTTCTGATCCTGCTCGAGATGGGAAAAGGTACTTGAAAGAATTTCACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

568

Amino Acids

62.96

Weight (kDa)

5.59

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 7 - 566 2.1e-246 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012127)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55740
fragaria_vesca FvH4_3g41930 FvH4_3g41930 FvH4_3g41930
malus_domestica MD03G1040100.v1.1 MD11G1041500.v1.1
prunus_persica Prupe.6G032400_v2.0.a1 Prupe.6G032400_v2.0.a1
pyrus_communis pycom03g03080 pycom11g03510
rosa_chinensis RchiOBHm_Chr5g0075141
rosa_laevigata RLG00000036533
rosa_multiflora Rmu_ssc0000217.1_g000009
rosa_roxburghii Rroxscaffold_1G00006480
rosa_rugosa Rorug05G0436500
rosa_samantha Rh5AG493800 Rh5CG539100 Rh5DG527900
rosa_wichuraiana Rw5G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1358, 1428
Acc36I ACCTGC 1 cut(s) 1202
AccI GTMKAC 2 cut(s) 362, 481
AciI CCGC 3 cut(s) 108, 199, 1520
AclI AACGTT 1 cut(s) 84
AclWI GGATC 6 cut(s) 449, 514, 863, 876, 1382, 1655
AcoI YGGCCR 1 cut(s) 117
AcsI RAATTY 3 cut(s) 830, 1448, 1694
AcuI CTGAAG 3 cut(s) 360, 392, 639
AfaI GTAC 3 cut(s) 625, 1593, 1685
AfiI CCNNNNNNNGG 4 cut(s) 104, 878, 1292, 1614
AflIII ACRYGT 1 cut(s) 600
AjnI CCWGG 4 cut(s) 976, 1033, 1555, 1627
AjuI GAANNNNNNNTTGG 4 cut(s) 47, 79, 113, 145
AluBI AGCT 7 cut(s) 684, 776, 1135, 1352, 1482, 1514, 1588
AluI AGCT 7 cut(s) 684, 776, 1135, 1352, 1482, 1514, 1588
Alw21I GWGCWC 1 cut(s) 1137
Alw26I GTCTC 2 cut(s) 272, 293
AlwI GGATC 6 cut(s) 449, 514, 863, 876, 1382, 1655
AlwNI CAGNNNCTG 1 cut(s) 536
Ama87I CYCGRG 3 cut(s) 188, 383, 1668
AoxI GGCC 8 cut(s) 99, 117, 126, 880, 1014, 1087, 1093, 1379
ApeKI GCWGC 3 cut(s) 1456, 1511, 1561
ApoI RAATTY 3 cut(s) 830, 1448, 1694
ArsI GACNNNNNNTTYG 2 cut(s) 271, 303
Asp700I GAANNNNTTC 1 cut(s) 1115
AspS9I GGNCC 2 cut(s) 126, 880
AsuC2I CCSGG 1 cut(s) 98
AsuHPI GGTGA 3 cut(s) 80, 335, 1240
AsuII TTCGAA 1 cut(s) 687
AvaI CYCGRG 3 cut(s) 188, 383, 1668
BaeI ACNNNNGTAYC 2 cut(s) 1279, 1312
BalI TGGCCA 1 cut(s) 119
BamHI GGATCC 1 cut(s) 868
BanII GRGCYC 2 cut(s) 1056, 1137
BauI CACGAG 1 cut(s) 1515
BbsI GAAGAC 2 cut(s) 548, 1639
Bbv12I GWGCWC 1 cut(s) 1137
BbvI GCAGC 3 cut(s) 1468, 1523, 1573
BceAI ACGGC 1 cut(s) 256
BciT130I CCWGG 4 cut(s) 978, 1035, 1557, 1629
BclI TGATCA 1 cut(s) 148
BcnI CCSGG 1 cut(s) 98
BcoDI GTCTC 2 cut(s) 272, 293
BfaI CTAG 4 cut(s) 443, 773, 1275, 1383
BfuAI ACCTGC 1 cut(s) 1202
BglI GCCNNNNNGGC 1 cut(s) 125
BisI GCNGC 3 cut(s) 1457, 1512, 1562
BlsI GCNGC 3 cut(s) 1458, 1513, 1563
Bme1390I CCNGG 5 cut(s) 98, 978, 1035, 1557, 1629
BmeT110I CYCGRG 3 cut(s) 188, 383, 1668
BmgT120I GGNCC 2 cut(s) 126, 880
BmiI GGNNCC 3 cut(s) 127, 870, 1606
BmrFI CCNGG 5 cut(s) 98, 978, 1035, 1557, 1629
BmrI ACTGGG 1 cut(s) 970
BmsI GCATC 7 cut(s) 582, 622, 1051, 1160, 1373, 1403, 1424
BmuI ACTGGG 1 cut(s) 970
BpiI GAAGAC 2 cut(s) 548, 1639
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
BpmI CTGGAG 1 cut(s) 1017
Bpu14I TTCGAA 1 cut(s) 687
BpuEI CTTGAG 1 cut(s) 1633
BpuMI CCSGG 1 cut(s) 98
BsaBI GATNNNNATC 2 cut(s) 434, 736
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 5 cut(s) 96, 303, 1034, 1090, 1556
BsaXI ACNNNNNCTCC 2 cut(s) 244, 274
Bsc4I CCNNNNNNNGG 4 cut(s) 104, 878, 1292, 1614
Bse1I ACTGG 4 cut(s) 614, 763, 958, 965
Bse3DI GCAATG 1 cut(s) 1074
Bse8I GATNNNNATC 2 cut(s) 434, 736
BseBI CCWGG 4 cut(s) 978, 1035, 1557, 1629
BseDI CCNNGG 5 cut(s) 96, 303, 1034, 1090, 1556
BseGI GGATG 5 cut(s) 240, 252, 637, 737, 1535
BseJI GATNNNNATC 2 cut(s) 434, 736
BseLI CCNNNNNNNGG 4 cut(s) 104, 878, 1292, 1614
BseMI GCAATG 1 cut(s) 1074
BseMII CTCAG 1 cut(s) 1098
BseNI ACTGG 4 cut(s) 614, 763, 958, 965
BseXI GCAGC 3 cut(s) 1468, 1523, 1573
Bsh1285I CGRYCG 1 cut(s) 180
BshFI GGCC 8 cut(s) 101, 119, 128, 882, 1016, 1089, 1095, 1381
BsiEI CGRYCG 1 cut(s) 180
BsiHKAI GWGCWC 1 cut(s) 1137
BsiHKCI CYCGRG 3 cut(s) 188, 383, 1668
BsiSI CCGG 3 cut(s) 98, 105, 163
BslI CCNNNNNNNGG 4 cut(s) 104, 878, 1292, 1614
BsmAI GTCTC 2 cut(s) 272, 293
BsmBI CGTCTC 1 cut(s) 272
BsnI GGCC 8 cut(s) 101, 119, 128, 882, 1016, 1089, 1095, 1381
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 3 cut(s) 188, 383, 1668
Bsp119I TTCGAA 1 cut(s) 687
Bsp1286I GDGCHC 2 cut(s) 1056, 1137
Bsp1407I TGTACA 1 cut(s) 623
Bsp143I GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
BspACI CCGC 3 cut(s) 108, 199, 1520
BspANI GGCC 8 cut(s) 101, 119, 128, 882, 1016, 1089, 1095, 1381
BspCNI CTCAG 1 cut(s) 1099
BspLI GGNNCC 3 cut(s) 127, 870, 1606
BspMI ACCTGC 1 cut(s) 1202
BspPI GGATC 6 cut(s) 449, 514, 863, 876, 1382, 1655
BspT104I TTCGAA 1 cut(s) 687
BspTNI GGTCTC 1 cut(s) 293
BsrDI GCAATG 1 cut(s) 1074
BsrGI TGTACA 1 cut(s) 623
BsrI ACTGG 4 cut(s) 614, 763, 958, 965
BssECI CCNNGG 5 cut(s) 96, 303, 1034, 1090, 1556
BssMI GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
BssNAI GTATAC 1 cut(s) 363
BssSI CACGAG 1 cut(s) 1515
BssT1I CCWWGG 2 cut(s) 303, 1090
Bst1107I GTATAC 1 cut(s) 363
Bst2BI CACGAG 1 cut(s) 1515
Bst2UI CCWGG 4 cut(s) 978, 1035, 1557, 1629
Bst4CI ACNGT 7 cut(s) 7, 25, 367, 538, 547, 1337, 1435
Bst6I CTCTTC 1 cut(s) 1337
BstAPI GCANNNNNTGC 3 cut(s) 794, 1421, 1517
BstAUI TGTACA 1 cut(s) 623
BstBI TTCGAA 1 cut(s) 687
BstC8I GCNNGC 1 cut(s) 945
BstDEI CTNAG 1 cut(s) 1107
BstF5I GGATG 5 cut(s) 240, 252, 637, 737, 1535
BstKTI GATC 7 cut(s) 151, 180, 457, 509, 871, 1390, 1663
BstMAI GTCTC 2 cut(s) 272, 293
BstMBI GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
BstMCI CGRYCG 1 cut(s) 180
BstMWI GCNNNNNNNGC 7 cut(s) 125, 794, 1262, 1271, 1421, 1517, 1561
BstNI CCWGG 4 cut(s) 978, 1035, 1557, 1629
BstNSI RCATGY 3 cut(s) 604, 920, 947
BstSCI CCNGG 5 cut(s) 96, 976, 1033, 1555, 1627
BstV1I GCAGC 3 cut(s) 1468, 1523, 1573
BstV2I GAAGAC 2 cut(s) 548, 1639
BstX2I RGATCY 3 cut(s) 454, 868, 1387
BstYI RGATCY 3 cut(s) 454, 868, 1387
BstZ17I GTATAC 1 cut(s) 363
BsuRI GGCC 8 cut(s) 101, 119, 128, 882, 1016, 1089, 1095, 1381
BtsCI GGATG 5 cut(s) 240, 252, 637, 737, 1535
BtsIMutI CAGTG 4 cut(s) 642, 756, 1342, 1431
BveI ACCTGC 1 cut(s) 1202
Cac8I GCNNGC 1 cut(s) 945
CaiI CAGNNNCTG 1 cut(s) 536
Cfr13I GGNCC 2 cut(s) 126, 880
CseI GACGC 2 cut(s) 289, 1254
CsiI ACCWGGT 1 cut(s) 976
Csp6I GTAC 3 cut(s) 624, 1592, 1684
CspCI CAANNNNNGTGG 4 cut(s) 292, 327, 745, 780
CviAII CATG 8 cut(s) 601, 627, 917, 944, 1217, 1453, 1505, 1565
CviQI GTAC 3 cut(s) 624, 1592, 1684
DdeI CTNAG 1 cut(s) 1107
DpnI GATC 7 cut(s) 150, 179, 456, 508, 870, 1389, 1662
DpnII GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
EaeI YGGCCR 1 cut(s) 117
Eam1104I CTCTTC 1 cut(s) 1337
EarI CTCTTC 1 cut(s) 1337
Ecl136II GAGCTC 1 cut(s) 1135
Eco130I CCWWGG 2 cut(s) 303, 1090
Eco24I GRGCYC 2 cut(s) 1056, 1137
Eco31I GGTCTC 1 cut(s) 293
Eco53kI GAGCTC 1 cut(s) 1135
Eco57I CTGAAG 3 cut(s) 360, 392, 639
Eco88I CYCGRG 3 cut(s) 188, 383, 1668
EcoICRI GAGCTC 1 cut(s) 1135
EcoO109I RGGNCCY 1 cut(s) 126
EcoRI GAATTC 1 cut(s) 1448
EcoRII CCWGG 4 cut(s) 976, 1033, 1555, 1627
EcoT14I CCWWGG 2 cut(s) 303, 1090
EcoT38I GRGCYC 2 cut(s) 1056, 1137
ErhI CCWWGG 2 cut(s) 303, 1090
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 8 cut(s) 604, 630, 920, 947, 1220, 1456, 1508, 1568
FatI CATG 8 cut(s) 600, 626, 916, 943, 1216, 1452, 1504, 1564
FbaI TGATCA 1 cut(s) 148
FblI GTMKAC 2 cut(s) 362, 481
Fnu4HI GCNGC 3 cut(s) 1457, 1512, 1562
FokI GGATG 5 cut(s) 247, 259, 644, 744, 1542
FriOI GRGCYC 2 cut(s) 1056, 1137
Fsp4HI GCNGC 3 cut(s) 1457, 1512, 1562
FspBI CTAG 4 cut(s) 443, 773, 1275, 1383
GluI GCNGC 3 cut(s) 1457, 1512, 1562
GsuI CTGGAG 1 cut(s) 1017
HaeIII GGCC 8 cut(s) 101, 119, 128, 882, 1016, 1089, 1095, 1381
HapII CCGG 3 cut(s) 98, 105, 163
HgaI GACGC 2 cut(s) 289, 1254
Hin1II CATG 8 cut(s) 604, 630, 920, 947, 1220, 1456, 1508, 1568
HindIII AAGCTT 1 cut(s) 1586
HinfI GANTC 7 cut(s) 143, 350, 379, 752, 1004, 1043, 1102
HpaII CCGG 3 cut(s) 98, 105, 163
HphI GGTGA 3 cut(s) 80, 335, 1240
Hpy166II GTNNAC 4 cut(s) 185, 363, 482, 624
Hpy188III TCNNGA 9 cut(s) 263, 383, 458, 578, 1106, 1196, 1286, 1612, 1670
Hpy8I GTNNAC 4 cut(s) 185, 363, 482, 624
HpyAV CCTTC 8 cut(s) 139, 148, 302, 320, 335, 893, 1075, 1218
HpyCH4III ACNGT 7 cut(s) 7, 25, 367, 538, 547, 1337, 1435
HpyCH4IV ACGT 2 cut(s) 84, 891
HpyCH4V TGCA 8 cut(s) 113, 797, 1151, 1238, 1394, 1415, 1456, 1535
HpyF10VI GCNNNNNNNGC 7 cut(s) 125, 794, 1262, 1271, 1421, 1517, 1561
HpyF3I CTNAG 1 cut(s) 1107
HpySE526I ACGT 2 cut(s) 84, 891
Hsp92II CATG 8 cut(s) 604, 630, 920, 947, 1220, 1456, 1508, 1568
Ksp22I TGATCA 1 cut(s) 148
Kzo9I GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
LmnI GCTCC 3 cut(s) 1140, 1508, 1610
Lsp1109I GCAGC 3 cut(s) 1468, 1523, 1573
LweI GCATC 7 cut(s) 582, 622, 1051, 1160, 1373, 1403, 1424
MabI ACCWGGT 1 cut(s) 976
MaeI CTAG 4 cut(s) 443, 773, 1275, 1383
MaeII ACGT 2 cut(s) 84, 891
MaeIII GTNAC 6 cut(s) 77, 91, 649, 854, 956, 1547
MalI GATC 7 cut(s) 150, 179, 456, 508, 870, 1389, 1662
MboI GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
MboII GAAGA 6 cut(s) 41, 398, 553, 601, 1354, 1644
MflI RGATCY 3 cut(s) 454, 868, 1387
MhlI GDGCHC 2 cut(s) 1056, 1137
MlsI TGGCCA 1 cut(s) 119
MluCI AATT 7 cut(s) 830, 903, 1161, 1404, 1448, 1536, 1694
MluNI TGGCCA 1 cut(s) 119
MlyI GAGTC 2 cut(s) 152, 1052
Mox20I TGGCCA 1 cut(s) 119
MroXI GAANNNNTTC 1 cut(s) 1115
MscI TGGCCA 1 cut(s) 119
MseI TTAA 5 cut(s) 222, 816, 906, 1173, 1580
MslI CAYNNNNRTG 3 cut(s) 321, 576, 1125
Msp20I TGGCCA 1 cut(s) 119
MspA1I CMGCKG 1 cut(s) 1352
MspI CCGG 3 cut(s) 98, 105, 163
MspR9I CCNGG 5 cut(s) 98, 978, 1035, 1557, 1629
MvaI CCWGG 4 cut(s) 978, 1035, 1557, 1629
MwoI GCNNNNNNNGC 7 cut(s) 125, 794, 1262, 1271, 1421, 1517, 1561
NciI CCSGG 1 cut(s) 98
NdeII GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
NlaIII CATG 8 cut(s) 604, 630, 920, 947, 1220, 1456, 1508, 1568
NlaIV GGNNCC 3 cut(s) 127, 870, 1606
NmuCI GTSAC 4 cut(s) 77, 649, 854, 1547
NspI RCATGY 3 cut(s) 604, 920, 947
NspV TTCGAA 1 cut(s) 687
PaeI GCATGC 1 cut(s) 947
PaeR7I CTCGAG 3 cut(s) 188, 383, 1668
PciI ACATGT 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PdmI GAANNNNTTC 1 cut(s) 1115
PfeI GAWTC 5 cut(s) 350, 379, 752, 1004, 1102
PkrI GCNGC 3 cut(s) 1458, 1513, 1563
Ple19I CGATCG 1 cut(s) 180
PleI GAGTC 2 cut(s) 151, 1051
PpsI GAGTC 2 cut(s) 151, 1051
PscI ACATGT 1 cut(s) 600
PsiI TTATAA 2 cut(s) 1358, 1428
Psp124BI GAGCTC 1 cut(s) 1137
Psp1406I AACGTT 1 cut(s) 84
Psp6I CCWGG 4 cut(s) 976, 1033, 1555, 1627
PspGI CCWGG 4 cut(s) 976, 1033, 1555, 1627
PspN4I GGNNCC 3 cut(s) 127, 870, 1606
PspPI GGNCC 2 cut(s) 126, 880
PspXI VCTCGAGB 1 cut(s) 188
PstNI CAGNNNCTG 1 cut(s) 536
PsuI RGATCY 3 cut(s) 454, 868, 1387
PvuI CGATCG 1 cut(s) 180
PvuII CAGCTG 1 cut(s) 1352
RsaI GTAC 3 cut(s) 625, 1593, 1685
RsaNI GTAC 3 cut(s) 624, 1592, 1684
RseI CAYNNNNRTG 3 cut(s) 321, 576, 1125
SacI GAGCTC 1 cut(s) 1137
SaqAI TTAA 5 cut(s) 222, 816, 906, 1173, 1580
SatI GCNGC 3 cut(s) 1457, 1512, 1562
Sau3AI GATC 7 cut(s) 148, 177, 454, 506, 868, 1387, 1660
Sau96I GGNCC 2 cut(s) 126, 880
SchI GAGTC 2 cut(s) 152, 1052
ScrFI CCNGG 5 cut(s) 98, 978, 1035, 1557, 1629
SduI GDGCHC 2 cut(s) 1056, 1137
SexAI ACCWGGT 1 cut(s) 976
SfaNI GCATC 7 cut(s) 582, 622, 1051, 1160, 1373, 1403, 1424
SfiI GGCCNNNNNGGCC 1 cut(s) 125
Sfr274I CTCGAG 3 cut(s) 188, 383, 1668
SfuI TTCGAA 1 cut(s) 687
SlaI CTCGAG 3 cut(s) 188, 383, 1668
SmiMI CAYNNNNRTG 3 cut(s) 321, 576, 1125
SmlI CTYRAG 4 cut(s) 188, 383, 1612, 1668
SmoI CTYRAG 4 cut(s) 188, 383, 1612, 1668
SphI GCATGC 1 cut(s) 947
Sse9I AATT 7 cut(s) 830, 903, 1161, 1404, 1448, 1536, 1694
SsiI CCGC 3 cut(s) 108, 199, 1520
SspI AATATT 1 cut(s) 814
SspMI CTAG 4 cut(s) 443, 773, 1275, 1383
SstI GAGCTC 1 cut(s) 1137
StyD4I CCNGG 5 cut(s) 96, 976, 1033, 1555, 1627
StyI CCWWGG 2 cut(s) 303, 1090
TaaI ACNGT 7 cut(s) 7, 25, 367, 538, 547, 1337, 1435
TaiI ACGT 2 cut(s) 87, 894
TaqI TCGA 5 cut(s) 189, 384, 687, 1197, 1669
TasI AATT 7 cut(s) 830, 903, 1161, 1404, 1448, 1536, 1694
TatI WGTACW 2 cut(s) 623, 1591
TfiI GAWTC 5 cut(s) 350, 379, 752, 1004, 1102
Tru1I TTAA 5 cut(s) 222, 816, 906, 1173, 1580
Tru9I TTAA 5 cut(s) 222, 816, 906, 1173, 1580
TscAI CASTG 4 cut(s) 649, 763, 1342, 1438
TseFI GTSAC 4 cut(s) 77, 649, 854, 1547
TseI GCWGC 3 cut(s) 1456, 1511, 1561
Tsp45I GTSAC 4 cut(s) 77, 649, 854, 1547
TspDTI ATGAA 7 cut(s) 121, 432, 560, 1017, 1397, 1441, 1466
TspRI CASTG 4 cut(s) 649, 763, 1342, 1438
XapI RAATTY 3 cut(s) 830, 1448, 1694
XceI RCATGY 3 cut(s) 604, 920, 947
XcmI CCANNNNNNNNNTGG 1 cut(s) 1322
XhoI CTCGAG 3 cut(s) 188, 383, 1668
XmiI GTMKAC 2 cut(s) 362, 481
XmnI GAANNNNTTC 1 cut(s) 1115
XspI CTAG 4 cut(s) 443, 773, 1275, 1383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.