Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010676

Physical Location & Seq

Genomic Coordinates Reverse (-)

35993563 .. 35997242

Gene Structure 3680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g43100.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGGCTCCATGAATTCAAACAACTGGCTTTCGTTTCCTCTTTCTCCTACTAATTCTTCTTTGCCATCACAACTTCACCCTTCTCACTCTCATCAATTCTCGCTAGGGTTAGTCAGTGATAGTATGGAGAATCCTTTCCAAAACCAAGACTGGAATATGATGAATACCCAAGGGAGCAGCGAGGTTCCGAAGGTAGCTGATTTTCTCGGTGTGGGCAAATCTGAGAATCAGCAAGATCTTGTGGCATACAATGACATTAATACTAATGAATCTGTCACCGATTATATTTTCCCAAACATTAATAATGCTATAGTTCCAGTGCAAAACGCGGTAGTTGGTACATCCAGCAACTACGATTTCCAGGAGAACTCCAACAGCCTGCAATCTTTGACTCTTTCCATGGGCAGTGGCAAAGGTTCTTCCACATGTGAAACCAGTGCCGATAATACTAGTACTGCTACTGTTGAAGCTCCCCCAAGAAGGGCTCTGGACACATTCGGACAAAGGACCTCTATTTATCGTGGTGTAACAAGGCATAGATGGACAGGAAGATATGAAGCTCATCTATGGGATAATAGTTGTAGAAGGGAGGGCCAATCAAGGAAGGGACGGCAAGTCTACTTGGGTGGGTATGACAAGGAAGAGAAAGCTGCTAGGGCTTATGACTTGGCTGCACTAAAGTACTGGGGAACATCCACCACTACGAATTTTCCAATTAGTAACTATGAGAAGGAGGTGGAGGAGATGAAGAACTGTACAAGACAGGAATTTGTGGCCTCCATTAGAAGGAAAAGTAGTGGCTTTTCTAGAGGAGCATCCATGTATCGCGGAGTTACAAGGCATCATCAACACGGCCGATGGCAGGCAAGGATAGGCAGAGTCGCCGGAAACAAAGACCTTTACCTGGGAACTTTCAGTACTGAGGAAGAGGCAGCTGAGGCTTATGACATAGCAGCGATAAAGTTCCGAGGCCTGAACGCCGTCACCAACTTTGACATGAGTCGATACGACGTGAAGAGCATTCTCGAGAGTAACACTCTCCCCATCGGTGGCGGCGCTGCAAAGAGGCTGAAAGAGGCTCAAGCCTTGGAAACATCTAGAAAACGTGAAGAAATGTTAGCTCTAGGCTCCACCTTCCAATATGCAGCTGGAGCCAGCTCATCAGCGAGCTCAGCTGCTCGCAACTTACAGGCCTACTCTTTGATGCAGCAGCAGCAGCCACAATCAGCTTATGATCAGACTCTACTCTCTCTACAAAACCATGACATGTCTCAGTACACCCACCATGACCCTTCATCGTACCAAAACTACATCCAAACCCAGCTTCAGTTGCAACAGCAATCTAGTAATTCTTATAACATTCACCAGCAAAGCCAAAGCCCTCATCCTTATTACAACACCTACTTGCAGAGTACTCACCCAGCTTTGCTTCAAGGCCTGATGGACATGGGGACTGCCTCCACCACTGTCATGGACAGTAGTGCTGGGGGGTACTTAGGGCATAATGGACTCGGGATGGCTTCGAATTCAACGACAACAAATGGGGTTGGATCGGCAGAAGAACTGGCCCTTGTTAAGGTTGATTACGACTTGCCGTCTGGAGGGTATGGCAGCTGGTCCGGTGGCTCAGTTCAGGGATCAAATCCCGGTGTTTTCACAATGTGGAATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000723 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010449 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031326 GO:0032200 GO:0032501 GO:0032502 GO:0034641 GO:0035266 GO:0040007 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0048364 GO:0048507 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098727 GO:0099402 GO:0140110 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

558

Amino Acids

61.3

Weight (kDa)

6.12

Isoelectric Point (pI)

50.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	173 - 227	1.4e-07	AP2 domain
AP2	PF00847	272 - 321	7.6e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51190 AT3G20840
fragaria_vesca	FvH4_3g43100 FvH4_3g43100
malus_domestica	MD03G1023900.v1.1 MD11G1028800.v1.1
prunus_persica	Prupe.6G023000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0077201
rosa_laevigata	RLG00000036673
rosa_multiflora	Rmu_co8310213.1_g000001 Rmu_sc0000099.1_g000011 Rmu_sc0004844.1_g000001
rosa_roxburghii	Rroxscaffold_1G00004880
rosa_rugosa	Rorug05G0452700
rosa_samantha	Rh5AG507600 Rh5BG529100 Rh5CG553600 Rh5DG541100 Rh5DG541300
rosa_wichuraiana	Rw5G046970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1356
AccI	GTMKAC	1 cut(s)	618
AccII	CGCG	2 cut(s)	329, 828
AciI	CCGC	3 cut(s)	329, 828, 1053
AclWI	GGATC	2 cut(s)	1558, 1645
AcoI	YGGCCR	1 cut(s)	853
AcsI	RAATTY	4 cut(s)	13, 706, 767, 1525
AcuI	CTGAAG	1 cut(s)	1310
AdeI	CACNNNGTG	1 cut(s)	1662
AfaI	GTAC	9 cut(s)	340, 454, 683, 757, 919, 1277, 1301, 1414, 1493
AfiI	CCNNNNNNNGG	8 cut(s)	480, 481, 786, 862, 904, 1049, 1576, 1601
AflIII	ACRYGT	2 cut(s)	425, 1266
AgsI	TTSAA	4 cut(s)	18, 467, 1433, 1530
AhdI	GACNNNNNGTC	2 cut(s)	614, 1594
AhlI	ACTAGT	1 cut(s)	449
AjiI	CACGTC	1 cut(s)	1012
AjnI	CCWGG	2 cut(s)	360, 903
AjuI	GAANNNNNNNTTGG	2 cut(s)	1308, 1340
Alw21I	GWGCWC	1 cut(s)	1172
Alw26I	GTCTC	1 cut(s)	1275
AlwI	GGATC	2 cut(s)	1558, 1645
Ama87I	CYCGRG	2 cut(s)	1025, 1511
AoxI	GGCC	7 cut(s)	592, 774, 853, 970, 1191, 1435, 1566
ApoI	RAATTY	4 cut(s)	13, 706, 767, 1525
AseI	ATTAAT	2 cut(s)	258, 300
Asp700I	GAANNNNTTC	1 cut(s)	134
AspLEI	GCGC	1 cut(s)	1058
AspS9I	GGNCC	4 cut(s)	507, 592, 1567, 1617
AsuC2I	CCSGG	1 cut(s)	1647
AsuHPI	GGTGA	5 cut(s)	68, 268, 976, 1355, 1409
AsuII	TTCGAA	1 cut(s)	1523
AvaI	CYCGRG	2 cut(s)	1025, 1511
AvaII	GGWCC	2 cut(s)	507, 1617
BanII	GRGCYC	3 cut(s)	8, 487, 1172
Bbv12I	GWGCWC	1 cut(s)	1172
BbvCI	CCTCAGC	1 cut(s)	936
BccI	CCATC	6 cut(s)	73, 534, 852, 1052, 1435, 1510
BceAI	ACGGC	4 cut(s)	626, 868, 965, 1579
BciT130I	CCWGG	2 cut(s)	362, 905
BclI	TGATCA	1 cut(s)	1234
BcnI	CCSGG	1 cut(s)	1647
BcoDI	GTCTC	1 cut(s)	1275
BcuI	ACTAGT	1 cut(s)	449
BfaI	CTAG	7 cut(s)	104, 450, 654, 807, 1098, 1124, 1344
BfmI	CTRYAG	1 cut(s)	309
BfoI	RGCGCY	1 cut(s)	1059
BglII	AGATCT	1 cut(s)	235
BlpI	GCTNAGC	1 cut(s)	1171
BmcAI	AGTACT	4 cut(s)	454, 683, 919, 1414
Bme1390I	CCNGG	3 cut(s)	362, 905, 1647
Bme18I	GGWCC	2 cut(s)	507, 1617
BmeRI	GACNNNNNGTC	2 cut(s)	614, 1594
BmeT110I	CYCGRG	2 cut(s)	1025, 1511
BmgBI	CACGTC	1 cut(s)	1012
BmgT120I	GGNCC	4 cut(s)	507, 592, 1567, 1617
BmiI	GGNNCC	4 cut(s)	7, 186, 1129, 1153
BmrFI	CCNGG	3 cut(s)	362, 905, 1647
BmrI	ACTGGG	1 cut(s)	694
BmsI	GCATC	3 cut(s)	824, 850, 1194
BmuI	ACTGGG	1 cut(s)	694
BoxI	GACNNNNGTC	1 cut(s)	999
BplI	GAGNNNNNCTC	2 cut(s)	1021, 1053
BpmI	CTGGAG	2 cut(s)	1170, 1620
Bpu10I	CCTNAGC	1 cut(s)	936
Bpu1102I	GCTNAGC	1 cut(s)	1171
Bpu14I	TTCGAA	1 cut(s)	1523
BpuEI	CTTGAG	1 cut(s)	1065
BpuMI	CCSGG	1 cut(s)	1647
BsaJI	CCNNGG	5 cut(s)	169, 399, 904, 967, 1086
BsaWI	WCCGGW	1 cut(s)	1619
Bsc4I	CCNNNNNNNGG	8 cut(s)	480, 481, 786, 862, 904, 1049, 1576, 1601
Bse1I	ACTGG	6 cut(s)	29, 155, 317, 435, 689, 1569
BseBI	CCWGG	2 cut(s)	362, 905
BseDI	CCNNGG	5 cut(s)	169, 399, 904, 967, 1086
BseGI	GGATG	6 cut(s)	341, 692, 815, 1311, 1384, 1521
BseLI	CCNNNNNNNGG	8 cut(s)	480, 481, 786, 862, 904, 1049, 1576, 1601
BseMII	CTCAG	6 cut(s)	213, 912, 927, 1185, 1286, 1641
BseNI	ACTGG	6 cut(s)	29, 155, 317, 435, 689, 1569
BseRI	GAGGAG	2 cut(s)	755, 825
BseX3I	CGGCCG	1 cut(s)	853
BseYI	CCCAGC	3 cut(s)	1320, 1420, 1484
BsgI	GTGCAG	1 cut(s)	657
Bsh1236I	CGCG	2 cut(s)	329, 828
Bsh1285I	CGRYCG	1 cut(s)	856
BshFI	GGCC	7 cut(s)	594, 776, 855, 972, 1193, 1437, 1568
BsiEI	CGRYCG	1 cut(s)	856
BsiHKAI	GWGCWC	1 cut(s)	1172
BsiHKCI	CYCGRG	2 cut(s)	1025, 1511
BsiSI	CCGG	3 cut(s)	885, 1620, 1647
BslFI	GGGAC	2 cut(s)	621, 1465
BslI	CCNNNNNNNGG	8 cut(s)	480, 481, 786, 862, 904, 1049, 1576, 1601
BsmAI	GTCTC	1 cut(s)	1275
BsmFI	GGGAC	2 cut(s)	621, 1465
BsmI	GAATGC	1 cut(s)	1020
BsnI	GGCC	7 cut(s)	594, 776, 855, 972, 1193, 1437, 1568
BsoBI	CYCGRG	2 cut(s)	1025, 1511
Bsp119I	TTCGAA	1 cut(s)	1523
Bsp1286I	GDGCHC	3 cut(s)	8, 487, 1172
Bsp1407I	TGTACA	1 cut(s)	755
Bsp143I	GATC	4 cut(s)	235, 1234, 1550, 1637
Bsp1720I	GCTNAGC	1 cut(s)	1171
Bsp19I	CCATGG	1 cut(s)	399
BspACI	CCGC	3 cut(s)	329, 828, 1053
BspANI	GGCC	7 cut(s)	594, 776, 855, 972, 1193, 1437, 1568
BspCNI	CTCAG	6 cut(s)	214, 913, 928, 1184, 1285, 1640
BspFNI	CGCG	2 cut(s)	329, 828
BspLI	GGNNCC	4 cut(s)	7, 186, 1129, 1153
BspPI	GGATC	2 cut(s)	1558, 1645
BspQI	GCTCTTC	1 cut(s)	1010
BspT104I	TTCGAA	1 cut(s)	1523
BsrGI	TGTACA	1 cut(s)	755
BsrI	ACTGG	6 cut(s)	29, 155, 317, 435, 689, 1569
BssECI	CCNNGG	5 cut(s)	169, 399, 904, 967, 1086
BssMI	GATC	4 cut(s)	235, 1234, 1550, 1637
BssT1I	CCWWGG	3 cut(s)	169, 399, 1086
Bst2UI	CCWGG	2 cut(s)	362, 905
Bst4CI	ACNGT	4 cut(s)	463, 755, 1468, 1478
Bst6I	CTCTTC	3 cut(s)	636, 921, 1010
BstAUI	TGTACA	1 cut(s)	755
BstBI	TTCGAA	1 cut(s)	1523
BstC8I	GCNNGC	5 cut(s)	380, 864, 1156, 1168, 1180
BstDEI	CTNAG	7 cut(s)	222, 921, 936, 1171, 1272, 1495, 1627
BstDSI	CCRYGG	1 cut(s)	399
BstENI	CCTNNNNNAGG	1 cut(s)	1574
BstF5I	GGATG	6 cut(s)	341, 692, 815, 1311, 1384, 1521
BstFNI	CGCG	2 cut(s)	329, 828
BstH2I	RGCGCY	1 cut(s)	1059
BstHHI	GCGC	1 cut(s)	1058
BstKTI	GATC	4 cut(s)	238, 1237, 1553, 1640
BstMAI	GTCTC	1 cut(s)	1275
BstMBI	GATC	4 cut(s)	235, 1234, 1550, 1637
BstMCI	CGRYCG	1 cut(s)	856
BstMWI	GCNNNNNNNGC	7 cut(s)	656, 938, 1151, 1172, 1213, 1216, 1330
BstNI	CCWGG	2 cut(s)	362, 905
BstNSI	RCATGY	2 cut(s)	429, 1270
BstPAI	GACNNNNGTC	1 cut(s)	999
BstSCI	CCNGG	3 cut(s)	360, 903, 1645
BstSFI	CTRYAG	1 cut(s)	309
BstUI	CGCG	2 cut(s)	329, 828
BstX2I	RGATCY	1 cut(s)	235
BstXI	CCANNNNNNTGG	1 cut(s)	1471
BstYI	RGATCY	1 cut(s)	235
BstZI	CGGCCG	1 cut(s)	853
BsuRI	GGCC	7 cut(s)	594, 776, 855, 972, 1193, 1437, 1568
BtgI	CCRYGG	1 cut(s)	399
BtrI	CACGTC	1 cut(s)	1012
BtsCI	GGATG	6 cut(s)	341, 692, 815, 1311, 1384, 1521
BtsI	GCAGTG	1 cut(s)	412
BtsIMutI	CAGTG	5 cut(s)	121, 324, 412, 442, 1464
Cac8I	GCNNGC	5 cut(s)	380, 864, 1156, 1168, 1180
CfoI	GCGC	1 cut(s)	1058
Cfr13I	GGNCC	4 cut(s)	507, 592, 1567, 1617
Csp6I	GTAC	9 cut(s)	339, 453, 682, 756, 918, 1276, 1300, 1413, 1492
CviQI	GTAC	9 cut(s)	339, 453, 682, 756, 918, 1276, 1300, 1413, 1492
DdeI	CTNAG	7 cut(s)	222, 921, 936, 1171, 1272, 1495, 1627
DpnI	GATC	4 cut(s)	237, 1236, 1552, 1639
DpnII	GATC	4 cut(s)	235, 1234, 1550, 1637
DraIII	CACNNNGTG	1 cut(s)	1662
DriI	GACNNNNNGTC	2 cut(s)	614, 1594
EaeI	YGGCCR	1 cut(s)	853
EagI	CGGCCG	1 cut(s)	853
Eam1104I	CTCTTC	3 cut(s)	636, 921, 1010
Eam1105I	GACNNNNNGTC	2 cut(s)	614, 1594
EarI	CTCTTC	3 cut(s)	636, 921, 1010
Ecl136II	GAGCTC	1 cut(s)	1170
EclXI	CGGCCG	1 cut(s)	853
Eco130I	CCWWGG	3 cut(s)	169, 399, 1086
Eco147I	AGGCCT	3 cut(s)	972, 1193, 1437
Eco24I	GRGCYC	3 cut(s)	8, 487, 1172
Eco47I	GGWCC	2 cut(s)	507, 1617
Eco52I	CGGCCG	1 cut(s)	853
Eco53kI	GAGCTC	1 cut(s)	1170
Eco57I	CTGAAG	1 cut(s)	1310
Eco88I	CYCGRG	2 cut(s)	1025, 1511
EcoICRI	GAGCTC	1 cut(s)	1170
EcoNI	CCTNNNNNAGG	1 cut(s)	1574
EcoO109I	RGGNCCY	1 cut(s)	507
EcoRI	GAATTC	2 cut(s)	13, 1525
EcoRII	CCWGG	2 cut(s)	360, 903
EcoT14I	CCWWGG	3 cut(s)	169, 399, 1086
EcoT38I	GRGCYC	3 cut(s)	8, 487, 1172
ErhI	CCWWGG	3 cut(s)	169, 399, 1086
FaqI	GGGAC	2 cut(s)	621, 1465
FbaI	TGATCA	1 cut(s)	1234
FblI	GTMKAC	1 cut(s)	618
FokI	GGATG	6 cut(s)	328, 679, 802, 1298, 1371, 1528
FriOI	GRGCYC	3 cut(s)	8, 487, 1172
FspBI	CTAG	7 cut(s)	104, 450, 654, 807, 1098, 1124, 1344
GlaI	GCGC	1 cut(s)	1057
GsaI	CCCAGC	3 cut(s)	1324, 1424, 1488
GsuI	CTGGAG	2 cut(s)	1170, 1620
HaeII	RGCGCY	1 cut(s)	1059
HaeIII	GGCC	7 cut(s)	594, 776, 855, 972, 1193, 1437, 1568
HapII	CCGG	3 cut(s)	885, 1620, 1647
HhaI	GCGC	1 cut(s)	1058
Hin6I	GCGC	1 cut(s)	1056
HinP1I	GCGC	1 cut(s)	1056
HinfI	GANTC	8 cut(s)	130, 226, 269, 391, 879, 1000, 1240, 1509
HpaII	CCGG	3 cut(s)	885, 1620, 1647
HphI	GGTGA	5 cut(s)	68, 268, 976, 1355, 1409
Hpy166II	GTNNAC	2 cut(s)	619, 1278
Hpy188I	TCNGA	5 cut(s)	189, 223, 500, 968, 1239
Hpy188III	TCNNGA	7 cut(s)	488, 807, 1025, 1027, 1098, 1513, 1599
Hpy8I	GTNNAC	2 cut(s)	619, 1278
Hpy99I	CGWCG	1 cut(s)	1013
HpyAV	CCTTC	9 cut(s)	90, 184, 474, 579, 598, 724, 780, 1144, 1302
HpyCH4III	ACNGT	4 cut(s)	463, 755, 1468, 1478
HpyCH4IV	ACGT	2 cut(s)	1011, 1105
HpyCH4V	TGCA	8 cut(s)	322, 382, 674, 1061, 1145, 1207, 1333, 1408
HpyF10VI	GCNNNNNNNGC	7 cut(s)	656, 938, 1151, 1172, 1213, 1216, 1330
HpyF3I	CTNAG	7 cut(s)	222, 921, 936, 1171, 1272, 1495, 1627
HpySE526I	ACGT	2 cut(s)	1011, 1105
HspAI	GCGC	1 cut(s)	1056
Ksp22I	TGATCA	1 cut(s)	1234
Kzo9I	GATC	4 cut(s)	235, 1234, 1550, 1637
LguI	GCTCTTC	1 cut(s)	1010
LmnI	GCTCC	6 cut(s)	11, 174, 475, 812, 1133, 1151
LweI	GCATC	3 cut(s)	824, 850, 1194
MaeI	CTAG	7 cut(s)	104, 450, 654, 807, 1098, 1124, 1344
MaeII	ACGT	2 cut(s)	1011, 1105
MaeIII	GTNAC	6 cut(s)	274, 526, 719, 832, 982, 1031
MalI	GATC	4 cut(s)	237, 1236, 1552, 1639
MboI	GATC	4 cut(s)	235, 1234, 1550, 1637
MboII	GAAGA	9 cut(s)	48, 411, 561, 653, 760, 938, 1027, 1121, 1571
MflI	RGATCY	1 cut(s)	235
MhlI	GDGCHC	3 cut(s)	8, 487, 1172
MluCI	AATT	8 cut(s)	13, 52, 95, 706, 714, 767, 1348, 1525
MlyI	GAGTC	5 cut(s)	385, 888, 1009, 1234, 1503
MmeI	TCCRAC	2 cut(s)	396, 1528
MroXI	GAANNNNTTC	1 cut(s)	134
MseI	TTAA	3 cut(s)	258, 300, 1575
MslI	CAYNNNNRTG	1 cut(s)	1469
MspA1I	CMGCKG	4 cut(s)	935, 1148, 1175, 1614
MspI	CCGG	3 cut(s)	885, 1620, 1647
MspR9I	CCNGG	3 cut(s)	362, 905, 1647
Mva1269I	GAATGC	1 cut(s)	1020
MvaI	CCWGG	2 cut(s)	362, 905
MvnI	CGCG	2 cut(s)	329, 828
MwoI	GCNNNNNNNGC	7 cut(s)	656, 938, 1151, 1172, 1213, 1216, 1330
NciI	CCSGG	1 cut(s)	1647
NcoI	CCATGG	1 cut(s)	399
NdeII	GATC	4 cut(s)	235, 1234, 1550, 1637
NlaIV	GGNNCC	4 cut(s)	7, 186, 1129, 1153
NmuCI	GTSAC	2 cut(s)	274, 982
NspI	RCATGY	2 cut(s)	429, 1270
NspV	TTCGAA	1 cut(s)	1523
PaeR7I	CTCGAG	1 cut(s)	1025
PceI	AGGCCT	3 cut(s)	972, 1193, 1437
PciI	ACATGT	2 cut(s)	425, 1266
PciSI	GCTCTTC	1 cut(s)	1010
PcsI	WCGNNNNNNNCGW	1 cut(s)	1529
PctI	GAATGC	1 cut(s)	1020
PdmI	GAANNNNTTC	1 cut(s)	134
PfeI	GAWTC	3 cut(s)	130, 226, 269
PfoI	TCCNGGA	1 cut(s)	360
PleI	GAGTC	5 cut(s)	385, 887, 1008, 1234, 1503
PpsI	GAGTC	5 cut(s)	385, 887, 1008, 1234, 1503
PpuMI	RGGWCCY	1 cut(s)	507
PscI	ACATGT	2 cut(s)	425, 1266
PshAI	GACNNNNGTC	1 cut(s)	999
PshBI	ATTAAT	2 cut(s)	258, 300
PsiI	TTATAA	1 cut(s)	1356
Psp124BI	GAGCTC	1 cut(s)	1172
Psp5II	RGGWCCY	1 cut(s)	507
Psp6I	CCWGG	2 cut(s)	360, 903
PspFI	CCCAGC	3 cut(s)	1320, 1420, 1484
PspGI	CCWGG	2 cut(s)	360, 903
PspN4I	GGNNCC	4 cut(s)	7, 186, 1129, 1153
PspPI	GGNCC	4 cut(s)	507, 592, 1567, 1617
PspPPI	RGGWCCY	1 cut(s)	507
PsrI	GAACNNNNNNTAC	2 cut(s)	901, 933
PsuI	RGATCY	1 cut(s)	235
PvuII	CAGCTG	4 cut(s)	935, 1148, 1175, 1614
RsaI	GTAC	9 cut(s)	340, 454, 683, 757, 919, 1277, 1301, 1414, 1493
RsaNI	GTAC	9 cut(s)	339, 453, 682, 756, 918, 1276, 1300, 1413, 1492
RseI	CAYNNNNRTG	1 cut(s)	1469
SacI	GAGCTC	1 cut(s)	1172
SapI	GCTCTTC	1 cut(s)	1010
SaqAI	TTAA	3 cut(s)	258, 300, 1575
Sau3AI	GATC	4 cut(s)	235, 1234, 1550, 1637
Sau96I	GGNCC	4 cut(s)	507, 592, 1567, 1617
ScaI	AGTACT	4 cut(s)	454, 683, 919, 1414
SchI	GAGTC	5 cut(s)	385, 888, 1009, 1234, 1503
ScrFI	CCNGG	3 cut(s)	362, 905, 1647
SduI	GDGCHC	3 cut(s)	8, 487, 1172
SfaNI	GCATC	3 cut(s)	824, 850, 1194
SfcI	CTRYAG	1 cut(s)	309
Sfr274I	CTCGAG	1 cut(s)	1025
SfuI	TTCGAA	1 cut(s)	1523
SinI	GGWCC	2 cut(s)	507, 1617
SlaI	CTCGAG	1 cut(s)	1025
SmiMI	CAYNNNNRTG	1 cut(s)	1469
SmlI	CTYRAG	2 cut(s)	1025, 1080
SmoI	CTYRAG	2 cut(s)	1025, 1080
SpeI	ACTAGT	1 cut(s)	449
Sse9I	AATT	8 cut(s)	13, 52, 95, 706, 714, 767, 1348, 1525
SseBI	AGGCCT	3 cut(s)	972, 1193, 1437
SsiI	CCGC	3 cut(s)	329, 828, 1053
SspMI	CTAG	7 cut(s)	104, 450, 654, 807, 1098, 1124, 1344
SstI	GAGCTC	1 cut(s)	1172
StuI	AGGCCT	3 cut(s)	972, 1193, 1437
StyD4I	CCNGG	3 cut(s)	360, 903, 1645
StyI	CCWWGG	3 cut(s)	169, 399, 1086
TaaI	ACNGT	4 cut(s)	463, 755, 1468, 1478
TaiI	ACGT	2 cut(s)	1014, 1108
TaqI	TCGA	3 cut(s)	1003, 1026, 1523
TasI	AATT	8 cut(s)	13, 52, 95, 706, 714, 767, 1348, 1525
TatI	WGTACW	6 cut(s)	452, 681, 755, 917, 1275, 1412
TauI	GCSGC	1 cut(s)	1056
TfiI	GAWTC	3 cut(s)	130, 226, 269
Tru1I	TTAA	3 cut(s)	258, 300, 1575
Tru9I	TTAA	3 cut(s)	258, 300, 1575
TscAI	CASTG	5 cut(s)	121, 324, 412, 442, 1471
TseFI	GTSAC	2 cut(s)	274, 982
Tsp45I	GTSAC	2 cut(s)	274, 982
TspDTI	ATGAA	6 cut(s)	26, 176, 282, 570, 761, 1284
TspRI	CASTG	5 cut(s)	121, 324, 412, 442, 1471
VpaK11BI	GGWCC	2 cut(s)	507, 1617
VspI	ATTAAT	2 cut(s)	258, 300
XagI	CCTNNNNNAGG	1 cut(s)	1574
XapI	RAATTY	4 cut(s)	13, 706, 767, 1525
XbaI	TCTAGA	2 cut(s)	806, 1097
XceI	RCATGY	2 cut(s)	429, 1270
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1145, 1468
XhoI	CTCGAG	1 cut(s)	1025
XmiI	GTMKAC	1 cut(s)	618
XmnI	GAANNNNTTC	1 cut(s)	134
XspI	CTAG	7 cut(s)	104, 450, 654, 807, 1098, 1124, 1344
ZrmI	AGTACT	4 cut(s)	454, 683, 919, 1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.