Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0010676

Physical Location & Seq

Genomic Coordinates Forward (+)

6653633 .. 6656572

Gene Structure 2940 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00004880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGGCTCCATGAATTCAAACAACTGGCTCTCATTTCCTCTTTCTCCTGCTAATTCTTCTTTGCCATCACAACTTCACCCATCTCACTCTCATCAATTCTCGCTAGGGTTAGTCAGTGACAGTATGGATAATCCTTTCCAAAACCACGAGTGGAATATGATTAATACCCAAGGGAGCAGCGACGTTCCGAAGGTAGCTGATTTTCTCGGTGTGGGCAAATCTGACAACCAGTCAGATCTTGTGGCCTACAATGAGATTAATGCTAATGAGTCCGTCACCGATTACATTTTTCCGAACATCAATAATGCTATAGTCCCACTGCAAAACGCTGTAGTTGGTACATCCAGCAACTACGATTTCCAGGAAAACTCCAATAGCCTGCAATCTTTGACTCTTTCCATGGGCAGTGGCAAAGGTTCTTCGACATGTGAAACCAGTGCCGATAATACTAGTACTACTACTGTTGAAGCTCCCCCAAGAAGGGCTCTGGACACATTTGGACAAAGGACCTCTATTTATCGTGGTGTAACAAGGCATAGATGGACCGGAAGATATGAAGCTCATCTATGGGATAATAGTTGTAGAAGGGAGGGCCAATCAAGGAAGGGCCGGCAAGGTGGGTATGACAAGGAAGAGAAAGCTGCTAGGGCATATGACTTGGCTGCACTAAAGTACTGGGGAACCTCCACCACTACGAATTTTCCAATTAGTAACTACGAGAAGGAGGTGGAGGAGATGAAGAACTGTACAAGACAGGAATTTGTGGCCTCCATTAGAAGGAAAAGTAGTGGCTTTTCAAGAGGAGCATCCATGTATCGTGGAGTTACAAGTGTAAAGATCAAAATCTTTGTTCTCCAGGCATCATCAGCACGGCCGATGGCAGGCAAGGATAGGCAGAGTTGCCGGAAACAAAGACCTTTACCTGGGAACTTTCACGATAAAGTTCCGAGGCCTGAACGCCGTCACCAACTTCGACATGAGTCGATACGACGTGAAGAGCATTCTCGAGAGCAACACTCTCCCCATCGGGGCGGCGCTGCAAAGCGGCTGAAAGAGGCTCAAGCTTTGGAAACATCTAGAAAACGTGAAGAAATGATAGCTCTGGGTTCCACCTTCCAATATGCAGCCGGAAGCAGCTCATCGGCGAGCTCAGCTGCTCGTAATTTACAGGCATACTCTTTGATGCAGCAGCAACCACAGTCAGCGTATGATCAGACTCTACTTTCTCTACAAAACCATGACATATCTCAGTACACCCACCATGATCCCTCTGCTTACCAAAACTACATCCAAACCCAGCTTCAGTTGCAACAGCAATCTAGTAATTCTTATAACATTCACCAGCAAAGCCAAAGCCCTCATCAGTATTACAACACCTACTTGCAGAGTACTCATCCTGCTCTGCTTCAAGGCCTGATGGACATGGGGACTGCATCTACCACTGTCATGGATAACAGTGCTGGAGGGTATTTAGGGCATAATGGACTCGGGATGGCTTCGAATTCAACGACCACAAATGGGGTCGGATCGGCAGAAGAACTTGCCCTTGTTAAGGTTGATTACGACATGCCGTCTGGAGGATATGGTAGCTGGTCCGGCGGCTCCGTTCAGGGATCAAATCCCGGTGTTTTCACAATGTGGAATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000723 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010449 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031326 GO:0032200 GO:0032501 GO:0032502 GO:0034641 GO:0035266 GO:0040007 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0048364 GO:0048507 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098727 GO:0099402 GO:0140110 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

549

Amino Acids

60.77

Weight (kDa)

8.46

Isoelectric Point (pI)

54.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	173 - 227	1.4e-07	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51190 AT3G20840
fragaria_vesca	FvH4_3g43100 FvH4_3g43100
malus_domestica	MD03G1023900.v1.1 MD11G1028800.v1.1
prunus_persica	Prupe.6G023000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0077201
rosa_laevigata	RLG00000036673
rosa_multiflora	Rmu_co8310213.1_g000001 Rmu_sc0000099.1_g000011 Rmu_sc0004844.1_g000001
rosa_roxburghii	Rroxscaffold_1G00004880
rosa_rugosa	Rorug05G0452700
rosa_samantha	Rh5AG507600 Rh5BG529100 Rh5CG553600 Rh5DG541100 Rh5DG541300
rosa_wichuraiana	Rw5G046970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1332
AciI	CCGC	3 cut(s)	1032, 1045, 1599
AclWI	GGATC	3 cut(s)	1259, 1534, 1621
AcoI	YGGCCR	1 cut(s)	872
AcsI	RAATTY	4 cut(s)	13, 697, 758, 1501
AcuI	CTGAAG	1 cut(s)	1286
AdeI	CACNNNGTG	1 cut(s)	1638
AfaI	GTAC	6 cut(s)	340, 454, 674, 748, 1253, 1390
AfiI	CCNNNNNNNGG	9 cut(s)	480, 481, 777, 881, 923, 1028, 1518, 1552, 1577
AflIII	ACRYGT	1 cut(s)	425
AgsI	TTSAA	5 cut(s)	18, 467, 798, 1409, 1506
AhdI	GACNNNNNGTC	2 cut(s)	229, 1570
AhlI	ACTAGT	1 cut(s)	449
AjiI	CACGTC	1 cut(s)	992
AjnI	CCWGG	3 cut(s)	360, 855, 922
AjuI	GAANNNNNNNTTGG	2 cut(s)	1284, 1316
Alw21I	GWGCWC	1 cut(s)	1151
AlwI	GGATC	3 cut(s)	1259, 1534, 1621
Ama87I	CYCGRG	2 cut(s)	1005, 1487
AoxI	GGCC	7 cut(s)	243, 592, 607, 765, 872, 950, 1411
ApeKI	GCWGC	9 cut(s)	177, 641, 662, 1037, 1124, 1134, 1154, 1186, 1189
ApoI	RAATTY	4 cut(s)	13, 697, 758, 1501
AseI	ATTAAT	2 cut(s)	162, 258
AspLEI	GCGC	1 cut(s)	1037
AspS9I	GGNCC	5 cut(s)	507, 543, 592, 607, 1593
AsuC2I	CCSGG	1 cut(s)	1623
AsuHPI	GGTGA	4 cut(s)	68, 268, 956, 1331
AsuII	TTCGAA	1 cut(s)	1499
AvaI	CYCGRG	2 cut(s)	1005, 1487
AvaII	GGWCC	3 cut(s)	507, 543, 1593
BanII	GRGCYC	3 cut(s)	8, 487, 1151
BauI	CACGAG	1 cut(s)	146
Bbv12I	GWGCWC	1 cut(s)	1151
BbvI	GCAGC	9 cut(s)	189, 628, 649, 1024, 1136, 1141, 1146, 1198, 1201
BccI	CCATC	7 cut(s)	73, 88, 534, 871, 1032, 1411, 1486
BceAI	ACGGC	3 cut(s)	887, 945, 1555
BciT130I	CCWGG	3 cut(s)	362, 857, 924
BclI	TGATCA	1 cut(s)	1210
BcnI	CCSGG	1 cut(s)	1623
BcuI	ACTAGT	1 cut(s)	449
BfaI	CTAG	5 cut(s)	104, 450, 645, 1077, 1320
BfmI	CTRYAG	2 cut(s)	309, 330
BfoI	RGCGCY	1 cut(s)	1038
BglII	AGATCT	1 cut(s)	235
BlpI	GCTNAGC	1 cut(s)	1150
BmcAI	AGTACT	3 cut(s)	454, 674, 1390
Bme1390I	CCNGG	4 cut(s)	362, 857, 924, 1623
Bme18I	GGWCC	3 cut(s)	507, 543, 1593
BmeRI	GACNNNNNGTC	2 cut(s)	229, 1570
BmeT110I	CYCGRG	2 cut(s)	1005, 1487
BmgBI	CACGTC	1 cut(s)	992
BmgT120I	GGNCC	5 cut(s)	507, 543, 592, 607, 1593
BmiI	GGNNCC	4 cut(s)	7, 682, 1108, 1603
BmrFI	CCNGG	4 cut(s)	362, 857, 924, 1623
BmrI	ACTGGG	1 cut(s)	685
BmsI	GCATC	4 cut(s)	815, 869, 1173, 1442
BmuI	ACTGGG	1 cut(s)	685
BoxI	GACNNNNGTC	1 cut(s)	979
BplI	GAGNNNNNCTC	2 cut(s)	1001, 1033
BpmI	CTGGAG	3 cut(s)	839, 1482, 1596
Bpu1102I	GCTNAGC	1 cut(s)	1150
Bpu14I	TTCGAA	1 cut(s)	1499
BpuEI	CTTGAG	1 cut(s)	1044
BpuMI	CCSGG	1 cut(s)	1623
BsaBI	GATNNNNATC	1 cut(s)	842
BsaJI	CCNNGG	4 cut(s)	169, 399, 923, 947
BsaWI	WCCGGW	1 cut(s)	545
Bsc4I	CCNNNNNNNGG	9 cut(s)	480, 481, 777, 881, 923, 1028, 1518, 1552, 1577
Bse118I	RCCGGY	1 cut(s)	609
Bse1I	ACTGG	4 cut(s)	29, 229, 435, 680
Bse8I	GATNNNNATC	1 cut(s)	842
BseBI	CCWGG	3 cut(s)	362, 857, 924
BseDI	CCNNGG	4 cut(s)	169, 399, 923, 947
BseGI	GGATG	5 cut(s)	341, 806, 1287, 1393, 1497
BseJI	GATNNNNATC	1 cut(s)	842
BseLI	CCNNNNNNNGG	9 cut(s)	480, 481, 777, 881, 923, 1028, 1518, 1552, 1577
BseMII	CTCAG	2 cut(s)	1164, 1262
BseNI	ACTGG	4 cut(s)	29, 229, 435, 680
BseRI	GAGGAG	2 cut(s)	746, 816
BseX3I	CGGCCG	1 cut(s)	872
BseXI	GCAGC	9 cut(s)	189, 628, 649, 1024, 1136, 1141, 1146, 1198, 1201
BseYI	CCCAGC	1 cut(s)	1296
BsgI	GTGCAG	1 cut(s)	648
Bsh1285I	CGRYCG	1 cut(s)	875
BshFI	GGCC	7 cut(s)	245, 594, 609, 767, 874, 952, 1413
BsiEI	CGRYCG	1 cut(s)	875
BsiHKAI	GWGCWC	1 cut(s)	1151
BsiHKCI	CYCGRG	2 cut(s)	1005, 1487
BsiSI	CCGG	6 cut(s)	546, 610, 904, 1128, 1596, 1623
BslFI	GGGAC	2 cut(s)	299, 1441
BslI	CCNNNNNNNGG	9 cut(s)	480, 481, 777, 881, 923, 1028, 1518, 1552, 1577
BsmFI	GGGAC	2 cut(s)	299, 1441
BsmI	GAATGC	1 cut(s)	1000
BsnI	GGCC	7 cut(s)	245, 594, 609, 767, 874, 952, 1413
BsoBI	CYCGRG	2 cut(s)	1005, 1487
Bsp119I	TTCGAA	1 cut(s)	1499
Bsp1286I	GDGCHC	3 cut(s)	8, 487, 1151
Bsp1407I	TGTACA	1 cut(s)	746
Bsp143I	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
Bsp1720I	GCTNAGC	1 cut(s)	1150
Bsp19I	CCATGG	1 cut(s)	399
BspACI	CCGC	3 cut(s)	1032, 1045, 1599
BspANI	GGCC	7 cut(s)	245, 594, 609, 767, 874, 952, 1413
BspCNI	CTCAG	2 cut(s)	1163, 1261
BspLI	GGNNCC	4 cut(s)	7, 682, 1108, 1603
BspPI	GGATC	3 cut(s)	1259, 1534, 1621
BspQI	GCTCTTC	1 cut(s)	990
BspT104I	TTCGAA	1 cut(s)	1499
BsrFI	RCCGGY	1 cut(s)	609
BsrGI	TGTACA	1 cut(s)	746
BsrI	ACTGG	4 cut(s)	29, 229, 435, 680
BssAI	RCCGGY	1 cut(s)	609
BssECI	CCNNGG	4 cut(s)	169, 399, 923, 947
BssMI	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
BssSI	CACGAG	1 cut(s)	146
BssT1I	CCWWGG	2 cut(s)	169, 399
Bst2BI	CACGAG	1 cut(s)	146
Bst2UI	CCWGG	3 cut(s)	362, 857, 924
Bst4CI	ACNGT	6 cut(s)	122, 463, 746, 1200, 1444, 1457
Bst6I	CTCTTC	2 cut(s)	627, 990
BstAUI	TGTACA	1 cut(s)	746
BstBI	TTCGAA	1 cut(s)	1499
BstC8I	GCNNGC	4 cut(s)	380, 611, 883, 1147
BstDEI	CTNAG	2 cut(s)	1150, 1248
BstDSI	CCRYGG	1 cut(s)	399
BstENI	CCTNNNNNAGG	1 cut(s)	1550
BstF5I	GGATG	5 cut(s)	341, 806, 1287, 1393, 1497
BstH2I	RGCGCY	1 cut(s)	1038
BstHHI	GCGC	1 cut(s)	1037
BstKTI	GATC	6 cut(s)	238, 840, 1213, 1267, 1529, 1616
BstMBI	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
BstMCI	CGRYCG	1 cut(s)	875
BstMWI	GCNNNNNNNGC	5 cut(s)	647, 866, 1151, 1306, 1596
BstNI	CCWGG	3 cut(s)	362, 857, 924
BstNSI	RCATGY	2 cut(s)	429, 1570
BstPAI	GACNNNNGTC	1 cut(s)	979
BstSCI	CCNGG	4 cut(s)	360, 855, 922, 1621
BstSFI	CTRYAG	2 cut(s)	309, 330
BstV1I	GCAGC	9 cut(s)	189, 628, 649, 1024, 1136, 1141, 1146, 1198, 1201
BstX2I	RGATCY	1 cut(s)	235
BstXI	CCANNNNNNTGG	1 cut(s)	1447
BstYI	RGATCY	1 cut(s)	235
BstZI	CGGCCG	1 cut(s)	872
BsuRI	GGCC	7 cut(s)	245, 594, 609, 767, 874, 952, 1413
BtgI	CCRYGG	1 cut(s)	399
BtrI	CACGTC	1 cut(s)	992
BtsCI	GGATG	5 cut(s)	341, 806, 1287, 1393, 1497
BtsI	GCAGTG	2 cut(s)	317, 412
BtsIMutI	CAGTG	6 cut(s)	121, 317, 412, 442, 1440, 1462
Cac8I	GCNNGC	4 cut(s)	380, 611, 883, 1147
CfoI	GCGC	1 cut(s)	1037
Cfr10I	RCCGGY	1 cut(s)	609
Cfr13I	GGNCC	5 cut(s)	507, 543, 592, 607, 1593
Csp6I	GTAC	6 cut(s)	339, 453, 673, 747, 1252, 1389
CviQI	GTAC	6 cut(s)	339, 453, 673, 747, 1252, 1389
DdeI	CTNAG	2 cut(s)	1150, 1248
DpnI	GATC	6 cut(s)	237, 839, 1212, 1266, 1528, 1615
DpnII	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
DraIII	CACNNNGTG	1 cut(s)	1638
DriI	GACNNNNNGTC	2 cut(s)	229, 1570
EaeI	YGGCCR	1 cut(s)	872
EagI	CGGCCG	1 cut(s)	872
Eam1104I	CTCTTC	2 cut(s)	627, 990
Eam1105I	GACNNNNNGTC	2 cut(s)	229, 1570
EarI	CTCTTC	2 cut(s)	627, 990
Ecl136II	GAGCTC	1 cut(s)	1149
EclXI	CGGCCG	1 cut(s)	872
Eco130I	CCWWGG	2 cut(s)	169, 399
Eco147I	AGGCCT	2 cut(s)	952, 1413
Eco24I	GRGCYC	3 cut(s)	8, 487, 1151
Eco47I	GGWCC	3 cut(s)	507, 543, 1593
Eco52I	CGGCCG	1 cut(s)	872
Eco53kI	GAGCTC	1 cut(s)	1149
Eco57I	CTGAAG	1 cut(s)	1286
Eco88I	CYCGRG	2 cut(s)	1005, 1487
EcoICRI	GAGCTC	1 cut(s)	1149
EcoNI	CCTNNNNNAGG	1 cut(s)	1550
EcoO109I	RGGNCCY	1 cut(s)	507
EcoRI	GAATTC	2 cut(s)	13, 1501
EcoRII	CCWGG	3 cut(s)	360, 855, 922
EcoT14I	CCWWGG	2 cut(s)	169, 399
EcoT38I	GRGCYC	3 cut(s)	8, 487, 1151
ErhI	CCWWGG	2 cut(s)	169, 399
FaqI	GGGAC	2 cut(s)	299, 1441
FauNDI	CATATG	1 cut(s)	652
FbaI	TGATCA	1 cut(s)	1210
FokI	GGATG	5 cut(s)	328, 793, 1274, 1380, 1504
FriOI	GRGCYC	3 cut(s)	8, 487, 1151
FspBI	CTAG	5 cut(s)	104, 450, 645, 1077, 1320
GlaI	GCGC	1 cut(s)	1036
GsaI	CCCAGC	1 cut(s)	1300
GsuI	CTGGAG	3 cut(s)	839, 1482, 1596
HaeII	RGCGCY	1 cut(s)	1038
HaeIII	GGCC	7 cut(s)	245, 594, 609, 767, 874, 952, 1413
HapII	CCGG	6 cut(s)	546, 610, 904, 1128, 1596, 1623
HhaI	GCGC	1 cut(s)	1037
Hin6I	GCGC	1 cut(s)	1035
HinP1I	GCGC	1 cut(s)	1035
HindIII	AAGCTT	1 cut(s)	1062
HinfI	GANTC	5 cut(s)	269, 391, 980, 1216, 1485
HpaII	CCGG	6 cut(s)	546, 610, 904, 1128, 1596, 1623
HphI	GGTGA	4 cut(s)	68, 268, 956, 1331
Hpy166II	GTNNAC	1 cut(s)	1254
Hpy188I	TCNGA	7 cut(s)	189, 223, 235, 294, 948, 1215, 1526
Hpy188III	TCNNGA	8 cut(s)	488, 798, 935, 1005, 1007, 1077, 1489, 1575
Hpy8I	GTNNAC	1 cut(s)	1254
Hpy99I	CGWCG	2 cut(s)	185, 993
HpyAV	CCTTC	7 cut(s)	184, 474, 579, 598, 715, 771, 1123
HpyCH4III	ACNGT	6 cut(s)	122, 463, 746, 1200, 1444, 1457
HpyCH4IV	ACGT	3 cut(s)	183, 991, 1084
HpyCH4V	TGCA	9 cut(s)	322, 382, 665, 1040, 1124, 1186, 1309, 1384, 1433
HpyF10VI	GCNNNNNNNGC	5 cut(s)	647, 866, 1151, 1306, 1596
HpyF3I	CTNAG	2 cut(s)	1150, 1248
HpySE526I	ACGT	3 cut(s)	183, 991, 1084
HspAI	GCGC	1 cut(s)	1035
KroI	GCCGGC	1 cut(s)	609
KroNI	GCCGGC	1 cut(s)	611
Ksp22I	TGATCA	1 cut(s)	1210
Kzo9I	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
LguI	GCTCTTC	1 cut(s)	990
LmnI	GCTCC	5 cut(s)	11, 174, 475, 803, 1607
Lsp1109I	GCAGC	9 cut(s)	189, 628, 649, 1024, 1136, 1141, 1146, 1198, 1201
LweI	GCATC	4 cut(s)	815, 869, 1173, 1442
MaeI	CTAG	5 cut(s)	104, 450, 645, 1077, 1320
MaeII	ACGT	3 cut(s)	183, 991, 1084
MaeIII	GTNAC	6 cut(s)	116, 274, 526, 710, 823, 962
MalI	GATC	6 cut(s)	237, 839, 1212, 1266, 1528, 1615
MboI	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
MboII	GAAGA	8 cut(s)	48, 411, 561, 644, 751, 1007, 1100, 1547
MflI	RGATCY	1 cut(s)	235
MhlI	GDGCHC	3 cut(s)	8, 487, 1151
MluCI	AATT	9 cut(s)	13, 52, 95, 697, 705, 758, 1162, 1324, 1501
MlyI	GAGTC	5 cut(s)	278, 385, 989, 1210, 1479
MmeI	TCCRAC	1 cut(s)	1504
MroNI	GCCGGC	1 cut(s)	609
MseI	TTAA	3 cut(s)	162, 258, 1551
MslI	CAYNNNNRTG	1 cut(s)	1445
MspA1I	CMGCKG	1 cut(s)	1154
MspI	CCGG	6 cut(s)	546, 610, 904, 1128, 1596, 1623
MspR9I	CCNGG	4 cut(s)	362, 857, 924, 1623
Mva1269I	GAATGC	1 cut(s)	1000
MvaI	CCWGG	3 cut(s)	362, 857, 924
MwoI	GCNNNNNNNGC	5 cut(s)	647, 866, 1151, 1306, 1596
NaeI	GCCGGC	1 cut(s)	611
NciI	CCSGG	1 cut(s)	1623
NcoI	CCATGG	1 cut(s)	399
NdeI	CATATG	1 cut(s)	652
NdeII	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
NgoMIV	GCCGGC	1 cut(s)	609
NlaIV	GGNNCC	4 cut(s)	7, 682, 1108, 1603
NmuCI	GTSAC	3 cut(s)	116, 274, 962
NspI	RCATGY	2 cut(s)	429, 1570
NspV	TTCGAA	1 cut(s)	1499
PaeR7I	CTCGAG	1 cut(s)	1005
PceI	AGGCCT	2 cut(s)	952, 1413
PciI	ACATGT	1 cut(s)	425
PciSI	GCTCTTC	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	1 cut(s)	1505
PctI	GAATGC	1 cut(s)	1000
PdiI	GCCGGC	1 cut(s)	611
PfoI	TCCNGGA	1 cut(s)	360
PleI	GAGTC	5 cut(s)	277, 385, 988, 1210, 1479
PpsI	GAGTC	5 cut(s)	277, 385, 988, 1210, 1479
PpuMI	RGGWCCY	1 cut(s)	507
PscI	ACATGT	1 cut(s)	425
PshAI	GACNNNNGTC	1 cut(s)	979
PshBI	ATTAAT	2 cut(s)	162, 258
PsiI	TTATAA	1 cut(s)	1332
Psp124BI	GAGCTC	1 cut(s)	1151
Psp5II	RGGWCCY	1 cut(s)	507
Psp6I	CCWGG	3 cut(s)	360, 855, 922
PspFI	CCCAGC	1 cut(s)	1296
PspGI	CCWGG	3 cut(s)	360, 855, 922
PspN4I	GGNNCC	4 cut(s)	7, 682, 1108, 1603
PspPI	GGNCC	5 cut(s)	507, 543, 592, 607, 1593
PspPPI	RGGWCCY	1 cut(s)	507
PsuI	RGATCY	1 cut(s)	235
PvuII	CAGCTG	1 cut(s)	1154
RsaI	GTAC	6 cut(s)	340, 454, 674, 748, 1253, 1390
RsaNI	GTAC	6 cut(s)	339, 453, 673, 747, 1252, 1389
RseI	CAYNNNNRTG	1 cut(s)	1445
SacI	GAGCTC	1 cut(s)	1151
SapI	GCTCTTC	1 cut(s)	990
SaqAI	TTAA	3 cut(s)	162, 258, 1551
Sau3AI	GATC	6 cut(s)	235, 837, 1210, 1264, 1526, 1613
Sau96I	GGNCC	5 cut(s)	507, 543, 592, 607, 1593
ScaI	AGTACT	3 cut(s)	454, 674, 1390
SchI	GAGTC	5 cut(s)	278, 385, 989, 1210, 1479
ScrFI	CCNGG	4 cut(s)	362, 857, 924, 1623
SduI	GDGCHC	3 cut(s)	8, 487, 1151
SfaNI	GCATC	4 cut(s)	815, 869, 1173, 1442
SfcI	CTRYAG	2 cut(s)	309, 330
Sfr274I	CTCGAG	1 cut(s)	1005
SfuI	TTCGAA	1 cut(s)	1499
SinI	GGWCC	3 cut(s)	507, 543, 1593
SlaI	CTCGAG	1 cut(s)	1005
SmiMI	CAYNNNNRTG	1 cut(s)	1445
SmlI	CTYRAG	2 cut(s)	1005, 1059
SmoI	CTYRAG	2 cut(s)	1005, 1059
SpeI	ACTAGT	1 cut(s)	449
Sse9I	AATT	9 cut(s)	13, 52, 95, 697, 705, 758, 1162, 1324, 1501
SseBI	AGGCCT	2 cut(s)	952, 1413
SsiI	CCGC	3 cut(s)	1032, 1045, 1599
SspMI	CTAG	5 cut(s)	104, 450, 645, 1077, 1320
SstI	GAGCTC	1 cut(s)	1151
StuI	AGGCCT	2 cut(s)	952, 1413
StyD4I	CCNGG	4 cut(s)	360, 855, 922, 1621
StyI	CCWWGG	2 cut(s)	169, 399
TaaI	ACNGT	6 cut(s)	122, 463, 746, 1200, 1444, 1457
TaiI	ACGT	3 cut(s)	186, 994, 1087
TaqI	TCGA	5 cut(s)	422, 973, 983, 1006, 1499
TasI	AATT	9 cut(s)	13, 52, 95, 697, 705, 758, 1162, 1324, 1501
TatI	WGTACW	5 cut(s)	452, 672, 746, 1251, 1388
TauI	GCSGC	3 cut(s)	1035, 1048, 1602
Tru1I	TTAA	3 cut(s)	162, 258, 1551
Tru9I	TTAA	3 cut(s)	162, 258, 1551
TscAI	CASTG	6 cut(s)	121, 324, 412, 442, 1447, 1462
TseFI	GTSAC	3 cut(s)	116, 274, 962
TseI	GCWGC	9 cut(s)	177, 641, 662, 1037, 1124, 1134, 1154, 1186, 1189
Tsp45I	GTSAC	3 cut(s)	116, 274, 962
TspDTI	ATGAA	3 cut(s)	26, 570, 752
TspGWI	ACGGA	2 cut(s)	262, 1594
TspRI	CASTG	6 cut(s)	121, 324, 412, 442, 1447, 1462
VpaK11BI	GGWCC	3 cut(s)	507, 543, 1593
VspI	ATTAAT	2 cut(s)	162, 258
XagI	CCTNNNNNAGG	1 cut(s)	1550
XapI	RAATTY	4 cut(s)	13, 697, 758, 1501
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	2 cut(s)	429, 1570
XhoI	CTCGAG	1 cut(s)	1005
XspI	CTAG	5 cut(s)	104, 450, 645, 1077, 1320
ZrmI	AGTACT	3 cut(s)	454, 674, 1390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.