FvH4_3g43290

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0011473
Physical Location & Seq
Forward (+)
36141117 .. 36145778
4662 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43290.t2

Sequence Viewer

Length: 1557 bp
ATGGCAGACTCCCCCTTCCAAGAGCTCCGATTCGGCTTCGAATCGGCTCGGCTCCGTCTCGGCTCGACTTCTCTAAGCCCCATACCCTCCCCCTCCACGCGGCGCCTCTCCATTGGAAGCGCCGAGCGGCCGAGTCACCGCGGGCGCAATATCGCCTCCGCCGCGGCTCGACAGCTGTCATGGTTGTCCCTTCAGGGATGGCTGGCCGACGCCGACGACGCCACGTCGGCACGAGCCATAAGGGGGGGCTTGGAGCCGGCGCAAGCCGTGGCTTGGGAGCTCTTTACCCCAATCCAGAGGATTCTCTTCGTCGCCGTTATAAGCGTCGCCGCCGCCGAGTCCAGGAAGAACCGCATCATTTCGCGGCTGAAGAAATCGGTGGAGTTTAGGGATCAGGTGTTGTTGAACATGCAGCACAAGCTTGACAGTCTATGCGCGCAGATAAGTAACATAAAGGACCACCCGGGGACTGAGACTCCGGTCATGTCCCCAACAAAGGACATAGAAATGCAATCTGATGAAGCTTTTGGTTGTGATAAAATCAAATTCGTTGATTGCGGTTGTTGGCTTTGTGATCAGCATCGTGATGTTTCTCATGGTTTGGTGGGTTGTAATGACATGAAAGGATCCGGTGGGTATGAGATACTACAATATAAAATGTCTATTGACCATGTAGCAGAGCAAGAGGAGCGCCGCATGTCTGATTTATCAGACCTGGCATCAAGTGTCACATCTGCTGCTGACTTCCAGCTGAACAGCTTAGCTATTGAACAAGACATGTACAATCTCAAAAGGGATTGTGAAGAGAAAGATGGGACCATAAGGGAGCTAACCTCTTTACTCCACTCATCTGAAACTGCTGGTTCGAAGAGGATTGCACAGTTGGAGGACATAATTCGTAGAAAAAATTCAACAATTACAAGACTAAAGAGGGACATGGCGGTTCTAGAGCAGAAGGTAGTACACCATGCAAGGCTTCAGAGGTCCTCTTACTCTTCTTCGTTAAGCTCGGATGATTCAGACTTTGCAGACACTCTTCCAAAAGTTCCTCACATGGCAGACAATCTTCTTTATGATATGGATAGTACTACAAGCCCTTCCGATTCAGATTGTTCCTCCCCCGTGAACCGAACATGCCAGAAACTAGTGCCAGAAAAGGCTTCAACTTCTATGGTAGATCCACTAACTAGCAGGTGCACATCGGTGGCTCCTTTGAAAGAGATAAGTATGAATTCAAGGCATTTGCGATCAGTTAACACAAGATCTCAAACAGTTAGTCCAAGACGGCAATCATTGAGTCCAAGATCCCGACCAACAAGTCCCTTATCCCCCTTTTCGAGACCTCAAACAGCAAGTCCAAGTTCCCGACCAGCAAGTCCCTTATCCCCCTTACCAAAAAAATCTCAGTCAGCGAGTGCTTTTAAAAGACCCGGTACATCTCAAACTTCAAGGCCAAGGCAGTTATCAGCTGGTGGAGATTCAAAAATCAATAAAAGGCGTCCTTTGCCTCTGCGGAAGGAATCAAAAAATGCTACTCCACAGAAGAGATGGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

519

Amino Acids

57.28

Weight (kDa)

9.46

Isoelectric Point (pI)

73.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011473)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12930
fragaria_vesca FvH4_3g43290 FvH4_3g43290 FvH4_3g43290 FvH4_3g43290
malus_domestica MD11G1028000.v1.1
prunus_persica Prupe.6G022100_v2.0.a1 Prupe.6G022100_v2.0.a1
pyrus_communis pycom03g01970 pycom11g02160
rosa_chinensis RchiOBHm_Chr5g0077351
rosa_laevigata RLG00000036690
rosa_multiflora Rmu_sc0005942.1_g000002
rosa_roxburghii Rroxscaffold_1G00004550
rosa_rugosa Rorug05G0454400
rosa_samantha Rh5AG509300 Rh5BG530800 Rh5CG555100 Rh5DG543000
rosa_wichuraiana Rw5G046820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 320
AarI CACCTGC 1 cut(s) 1182
AasI GACNNNNNNGTC 2 cut(s) 1317, 1374
Acc36I ACCTGC 1 cut(s) 1182
AccB1I GGYRCC 1 cut(s) 102
AccBSI CCGCTC 1 cut(s) 127
AccII CGCG 5 cut(s) 100, 141, 164, 364, 437
AclWI GGATC 5 cut(s) 399, 621, 634, 1172, 1299
AcoI YGGCCR 2 cut(s) 128, 204
AcsI RAATTY 3 cut(s) 545, 907, 1231
AcuI CTGAAG 3 cut(s) 176, 389, 962
AcyI GRCGYC 4 cut(s) 103, 210, 219, 1498
AfaI GTAC 4 cut(s) 782, 963, 1087, 1435
AfiI CCNNNNNNNGG 5 cut(s) 99, 243, 273, 342, 496
AflIII ACRYGT 1 cut(s) 777
AgsI TTSAA 8 cut(s) 406, 770, 912, 1164, 1216, 1236, 1449, 1482
AhdI GACNNNNNGTC 1 cut(s) 223
AhlI ACTAGT 1 cut(s) 1144
AjiI CACGTC 1 cut(s) 225
AjnI CCWGG 2 cut(s) 341, 714
AleI CACNNNNGTG 1 cut(s) 1202
Alw21I GWGCWC 3 cut(s) 27, 282, 1199
Alw26I GTCTC 3 cut(s) 62, 467, 1333
Alw44I GTGCAC 1 cut(s) 1195
AlwI GGATC 5 cut(s) 399, 621, 634, 1172, 1299
Ama87I CYCGRG 1 cut(s) 463
AoxI GGCC 3 cut(s) 128, 204, 1451
ApaLI GTGCAC 1 cut(s) 1195
ApeKI GCWGC 2 cut(s) 412, 737
ApoI RAATTY 3 cut(s) 545, 907, 1231
ArsI GACNNNNNNTTYG 4 cut(s) 1261, 1293, 1339, 1371
Asp700I GAANNNNTTC 1 cut(s) 907
AspLEI GCGC 7 cut(s) 105, 122, 147, 262, 437, 439, 693
AspS9I GGNCC 3 cut(s) 457, 816, 984
AsuC2I CCSGG 3 cut(s) 464, 465, 1431
AsuHPI GGTGA 1 cut(s) 128
AsuII TTCGAA 2 cut(s) 39, 866
AvaI CYCGRG 1 cut(s) 463
AvaII GGWCC 3 cut(s) 457, 816, 984
BaeGI GKGCMC 1 cut(s) 1199
BamHI GGATCC 1 cut(s) 626
BanI GGYRCC 1 cut(s) 102
BanII GRGCYC 2 cut(s) 27, 282
BauI CACGAG 1 cut(s) 231
Bbv12I GWGCWC 3 cut(s) 27, 282, 1199
BbvI GCAGC 2 cut(s) 424, 724
BccI CCATC 3 cut(s) 192, 806, 1542
BceAI ACGGC 3 cut(s) 251, 299, 1301
BciT130I CCWGG 2 cut(s) 343, 716
BclI TGATCA 1 cut(s) 574
BcnI CCSGG 3 cut(s) 464, 465, 1431
BcoDI GTCTC 3 cut(s) 62, 467, 1333
BcuI ACTAGT 1 cut(s) 1144
BfaI CTAG 3 cut(s) 947, 1145, 1188
BfoI RGCGCY 3 cut(s) 106, 123, 694
BfuAI ACCTGC 1 cut(s) 1182
BglI GCCNNNNNGGC 1 cut(s) 227
BglII AGATCT 1 cut(s) 1262
BlpI GCTNAGC 1 cut(s) 760
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 5 cut(s) 343, 464, 465, 716, 1431
Bme18I GGWCC 3 cut(s) 457, 816, 984
BmeRI GACNNNNNGTC 1 cut(s) 223
BmeT110I CYCGRG 1 cut(s) 463
BmgBI CACGTC 1 cut(s) 225
BmgT120I GGNCC 3 cut(s) 457, 816, 984
BmiI GGNNCC 6 cut(s) 53, 104, 255, 628, 817, 1209
BmrFI CCNGG 5 cut(s) 343, 464, 465, 716, 1431
BmsI GCATC 3 cut(s) 363, 589, 728
BoxI GACNNNNGTC 2 cut(s) 175, 479
BplI GAGNNNNNCTC 2 cut(s) 818, 850
Bpu1102I GCTNAGC 1 cut(s) 760
Bpu14I TTCGAA 2 cut(s) 39, 866
BpuMI CCSGG 3 cut(s) 464, 465, 1431
BsaBI GATNNNNATC 1 cut(s) 579
BsaHI GRCGYC 4 cut(s) 103, 210, 219, 1498
BsaI GGTCTC 1 cut(s) 1333
BsaJI CCNNGG 6 cut(s) 139, 162, 267, 463, 464, 1454
BsaWI WCCGGW 2 cut(s) 478, 629
BsaXI ACNNNNNCTCC 2 cut(s) 460, 490
Bsc4I CCNNNNNNNGG 5 cut(s) 99, 243, 273, 342, 496
Bse118I RCCGGY 1 cut(s) 256
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 2 cut(s) 343, 716
BseDI CCNNGG 6 cut(s) 139, 162, 267, 463, 464, 1454
BseGI GGATG 2 cut(s) 203, 1018
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 5 cut(s) 99, 243, 273, 342, 496
BseMII CTCAG 2 cut(s) 462, 1418
BsePI GCGCGC 1 cut(s) 435
BseRI GAGGAG 1 cut(s) 701
BseSI GKGCMC 1 cut(s) 1199
BseX3I CGGCCG 1 cut(s) 128
BseXI GCAGC 2 cut(s) 424, 724
Bsh1236I CGCG 5 cut(s) 100, 141, 164, 364, 437
Bsh1285I CGRYCG 1 cut(s) 131
BshFI GGCC 3 cut(s) 130, 206, 1453
BshNI GGYRCC 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 131
BsiHKAI GWGCWC 3 cut(s) 27, 282, 1199
BsiHKCI CYCGRG 1 cut(s) 463
BsiSI CCGG 5 cut(s) 257, 464, 479, 630, 1431
BslFI GGGAC 7 cut(s) 172, 472, 481, 829, 947, 1305, 1362
BslI CCNNNNNNNGG 5 cut(s) 99, 243, 273, 342, 496
BsmAI GTCTC 3 cut(s) 62, 467, 1333
BsmBI CGTCTC 1 cut(s) 62
BsmFI GGGAC 7 cut(s) 172, 472, 481, 829, 947, 1305, 1362
BsnI GGCC 3 cut(s) 130, 206, 1453
Bso31I GGTCTC 1 cut(s) 1333
BsoBI CYCGRG 1 cut(s) 463
Bsp119I TTCGAA 2 cut(s) 39, 866
Bsp1286I GDGCHC 3 cut(s) 27, 282, 1199
Bsp1407I TGTACA 1 cut(s) 780
Bsp143I GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
Bsp1720I GCTNAGC 1 cut(s) 760
BspANI GGCC 3 cut(s) 130, 206, 1453
BspCNI CTCAG 2 cut(s) 463, 1417
BspFNI CGCG 5 cut(s) 100, 141, 164, 364, 437
BspLI GGNNCC 6 cut(s) 53, 104, 255, 628, 817, 1209
BspMI ACCTGC 1 cut(s) 1182
BspPI GGATC 5 cut(s) 399, 621, 634, 1172, 1299
BspT104I TTCGAA 2 cut(s) 39, 866
BspT107I GGYRCC 1 cut(s) 102
BspTNI GGTCTC 1 cut(s) 1333
BsrBI CCGCTC 1 cut(s) 127
BsrFI RCCGGY 1 cut(s) 256
BsrGI TGTACA 1 cut(s) 780
BssAI RCCGGY 1 cut(s) 256
BssECI CCNNGG 6 cut(s) 139, 162, 267, 463, 464, 1454
BssHII GCGCGC 1 cut(s) 435
BssMI GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
BssNI GRCGYC 4 cut(s) 103, 210, 219, 1498
BssSI CACGAG 1 cut(s) 231
BssT1I CCWWGG 1 cut(s) 1454
Bst2BI CACGAG 1 cut(s) 231
Bst2UI CCWGG 2 cut(s) 343, 716
Bst4CI ACNGT 3 cut(s) 428, 882, 1273
Bst6I CTCTTC 6 cut(s) 311, 798, 863, 1000, 1041, 1538
BstACI GRCGYC 4 cut(s) 103, 210, 219, 1498
BstAUI TGTACA 1 cut(s) 780
BstBI TTCGAA 2 cut(s) 39, 866
BstC8I GCNNGC 5 cut(s) 143, 204, 258, 264, 437
BstDEI CTNAG 5 cut(s) 74, 471, 760, 1404, 1554
BstDSI CCRYGG 3 cut(s) 139, 162, 267
BstF5I GGATG 2 cut(s) 203, 1018
BstFNI CGCG 5 cut(s) 100, 141, 164, 364, 437
BstH2I RGCGCY 3 cut(s) 106, 123, 694
BstHHI GCGC 7 cut(s) 105, 122, 147, 262, 437, 439, 693
BstKTI GATC 7 cut(s) 394, 577, 629, 1180, 1250, 1265, 1307
BstMAI GTCTC 3 cut(s) 62, 467, 1333
BstMBI GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
BstMCI CGRYCG 1 cut(s) 131
BstMWI GCNNNNNNNGC 6 cut(s) 161, 218, 227, 418, 688, 1504
BstNI CCWGG 2 cut(s) 343, 716
BstNSI RCATGY 4 cut(s) 412, 700, 781, 1137
BstPAI GACNNNNGTC 2 cut(s) 175, 479
BstSCI CCNGG 5 cut(s) 341, 462, 463, 714, 1429
BstSLI GKGCMC 1 cut(s) 1199
BstUI CGCG 5 cut(s) 100, 141, 164, 364, 437
BstV1I GCAGC 2 cut(s) 424, 724
BstX2I RGATCY 4 cut(s) 626, 1177, 1262, 1304
BstYI RGATCY 4 cut(s) 626, 1177, 1262, 1304
BstZI CGGCCG 1 cut(s) 128
BsuRI GGCC 3 cut(s) 130, 206, 1453
BtgI CCRYGG 3 cut(s) 139, 162, 267
BtrI CACGTC 1 cut(s) 225
BtsCI GGATG 2 cut(s) 203, 1018
BveI ACCTGC 1 cut(s) 1182
Cac8I GCNNGC 5 cut(s) 143, 204, 258, 264, 437
CfoI GCGC 7 cut(s) 105, 122, 147, 262, 437, 439, 693
Cfr10I RCCGGY 1 cut(s) 256
Cfr13I GGNCC 3 cut(s) 457, 816, 984
Cfr42I CCGCGG 2 cut(s) 142, 165
Cfr9I CCCGGG 1 cut(s) 463
CseI GACGC 4 cut(s) 218, 227, 313, 1487
Csp6I GTAC 4 cut(s) 781, 962, 1086, 1434
CviQI GTAC 4 cut(s) 781, 962, 1086, 1434
DdeI CTNAG 5 cut(s) 74, 471, 760, 1404, 1554
DinI GGCGCC 1 cut(s) 104
DpnI GATC 7 cut(s) 393, 576, 628, 1179, 1249, 1264, 1306
DpnII GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
DraI TTTAAA 1 cut(s) 1423
DrdI GACNNNNNNGTC 2 cut(s) 1317, 1374
DriI GACNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 2 cut(s) 1317, 1374
EaeI YGGCCR 2 cut(s) 128, 204
EagI CGGCCG 1 cut(s) 128
Eam1104I CTCTTC 6 cut(s) 311, 798, 863, 1000, 1041, 1538
Eam1105I GACNNNNNGTC 1 cut(s) 223
EarI CTCTTC 6 cut(s) 311, 798, 863, 1000, 1041, 1538
EciI GGCGGA 1 cut(s) 148
Ecl136II GAGCTC 2 cut(s) 25, 280
EclXI CGGCCG 1 cut(s) 128
Eco130I CCWWGG 1 cut(s) 1454
Eco24I GRGCYC 2 cut(s) 27, 282
Eco31I GGTCTC 1 cut(s) 1333
Eco47I GGWCC 3 cut(s) 457, 816, 984
Eco52I CGGCCG 1 cut(s) 128
Eco53kI GAGCTC 2 cut(s) 25, 280
Eco57I CTGAAG 3 cut(s) 176, 389, 962
Eco88I CYCGRG 1 cut(s) 463
EcoICRI GAGCTC 2 cut(s) 25, 280
EcoO109I RGGNCCY 1 cut(s) 984
EcoRI GAATTC 1 cut(s) 1231
EcoRII CCWGG 2 cut(s) 341, 714
EcoT14I CCWWGG 1 cut(s) 1454
EcoT38I GRGCYC 2 cut(s) 27, 282
EgeI GGCGCC 1 cut(s) 104
EheI GGCGCC 1 cut(s) 104
ErhI CCWWGG 1 cut(s) 1454
Esp3I CGTCTC 1 cut(s) 62
FalI AAGNNNNNCTT 2 cut(s) 1486, 1518
FaqI GGGAC 7 cut(s) 172, 472, 481, 829, 947, 1305, 1362
FauI CCCGC 1 cut(s) 134
FbaI TGATCA 1 cut(s) 574
FokI GGATG 2 cut(s) 210, 1025
FriOI GRGCYC 2 cut(s) 27, 282
FspBI CTAG 3 cut(s) 947, 1145, 1188
GlaI GCGC 7 cut(s) 104, 121, 146, 261, 436, 438, 692
HaeII RGCGCY 3 cut(s) 106, 123, 694
HaeIII GGCC 3 cut(s) 130, 206, 1453
HapII CCGG 5 cut(s) 257, 464, 479, 630, 1431
HgaI GACGC 4 cut(s) 218, 227, 313, 1487
HhaI GCGC 7 cut(s) 105, 122, 147, 262, 437, 439, 693
Hin1I GRCGYC 4 cut(s) 103, 210, 219, 1498
Hin6I GCGC 7 cut(s) 103, 120, 145, 260, 435, 437, 691
HinP1I GCGC 7 cut(s) 103, 120, 145, 260, 435, 437, 691
HincII GTYRAC 1 cut(s) 1255
HindII GTYRAC 1 cut(s) 1255
HindIII AAGCTT 2 cut(s) 419, 522
HpaI GTTAAC 1 cut(s) 1255
HpaII CCGG 5 cut(s) 257, 464, 479, 630, 1431
HphI GGTGA 1 cut(s) 128
Hpy166II GTNNAC 4 cut(s) 964, 1126, 1197, 1255
Hpy188III TCNNGA 6 cut(s) 295, 584, 947, 1308, 1338, 1365
Hpy8I GTNNAC 4 cut(s) 964, 1126, 1197, 1255
Hpy99I CGWCG 6 cut(s) 212, 218, 221, 229, 314, 329
HpyAV CCTTC 5 cut(s) 25, 200, 949, 1107, 1510
HpyCH4III ACNGT 3 cut(s) 428, 882, 1273
HpyCH4IV ACGT 1 cut(s) 224
HpyCH4V TGCA 6 cut(s) 412, 511, 878, 971, 1028, 1197
HpyF10VI GCNNNNNNNGC 6 cut(s) 161, 218, 227, 418, 688, 1504
HpyF3I CTNAG 5 cut(s) 74, 471, 760, 1404, 1554
HpySE526I ACGT 1 cut(s) 224
Hsp92I GRCGYC 4 cut(s) 103, 210, 219, 1498
HspAI GCGC 7 cut(s) 103, 120, 145, 260, 435, 437, 691
KasI GGCGCC 1 cut(s) 102
KroI GCCGGC 1 cut(s) 256
KroNI GCCGGC 1 cut(s) 258
Ksp22I TGATCA 1 cut(s) 574
KspAI GTTAAC 1 cut(s) 1255
KspI CCGCGG 2 cut(s) 142, 165
Kzo9I GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
LmnI GCTCC 7 cut(s) 30, 57, 253, 277, 688, 826, 1213
Lsp1109I GCAGC 2 cut(s) 424, 724
LweI GCATC 3 cut(s) 363, 589, 728
MaeI CTAG 3 cut(s) 947, 1145, 1188
MaeII ACGT 1 cut(s) 224
MaeIII GTNAC 3 cut(s) 134, 446, 727
MalI GATC 7 cut(s) 393, 576, 628, 1179, 1249, 1264, 1306
MbiI CCGCTC 1 cut(s) 127
MboI GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
MflI RGATCY 4 cut(s) 626, 1177, 1262, 1304
MhlI GDGCHC 3 cut(s) 27, 282, 1199
MluCI AATT 5 cut(s) 545, 894, 907, 915, 1231
Mly113I GGCGCC 1 cut(s) 103
MlyI GAGTC 5 cut(s) 2, 142, 347, 469, 1306
MmeI TCCRAC 1 cut(s) 864
MroNI GCCGGC 1 cut(s) 256
MroXI GAANNNNTTC 1 cut(s) 907
MseI TTAA 3 cut(s) 1004, 1254, 1422
MslI CAYNNNNRTG 3 cut(s) 506, 585, 1202
MspA1I CMGCKG 5 cut(s) 141, 164, 175, 751, 1469
MspI CCGG 5 cut(s) 257, 464, 479, 630, 1431
MspR9I CCNGG 5 cut(s) 343, 464, 465, 716, 1431
MvaI CCWGG 2 cut(s) 343, 716
MvnI CGCG 5 cut(s) 100, 141, 164, 364, 437
MwoI GCNNNNNNNGC 6 cut(s) 161, 218, 227, 418, 688, 1504
NaeI GCCGGC 1 cut(s) 258
NarI GGCGCC 1 cut(s) 103
NciI CCSGG 3 cut(s) 464, 465, 1431
NdeII GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
NgoMIV GCCGGC 1 cut(s) 256
NlaIV GGNNCC 6 cut(s) 53, 104, 255, 628, 817, 1209
NmeAIII GCCGAG 5 cut(s) 28, 39, 148, 156, 361
NmuCI GTSAC 2 cut(s) 134, 727
NspI RCATGY 4 cut(s) 412, 700, 781, 1137
NspV TTCGAA 2 cut(s) 39, 866
OliI CACNNNNGTG 1 cut(s) 1202
PaqCI CACCTGC 1 cut(s) 1182
PauI GCGCGC 1 cut(s) 435
PciI ACATGT 1 cut(s) 777
PcsI WCGNNNNNNNCGW 1 cut(s) 333
PdiI GCCGGC 1 cut(s) 258
PdmI GAANNNNTTC 1 cut(s) 907
PfeI GAWTC 7 cut(s) 30, 41, 301, 1016, 1103, 1478, 1520
PfoI TCCNGGA 1 cut(s) 341
PleI GAGTC 5 cut(s) 2, 141, 346, 469, 1305
PluTI GGCGCC 1 cut(s) 106
PpsI GAGTC 5 cut(s) 2, 141, 346, 469, 1305
PpuMI RGGWCCY 1 cut(s) 984
PscI ACATGT 1 cut(s) 777
PshAI GACNNNNGTC 2 cut(s) 175, 479
PsiI TTATAA 1 cut(s) 320
Psp124BI GAGCTC 2 cut(s) 27, 282
Psp5II RGGWCCY 1 cut(s) 984
Psp6I CCWGG 2 cut(s) 341, 714
PspGI CCWGG 2 cut(s) 341, 714
PspN4I GGNNCC 6 cut(s) 53, 104, 255, 628, 817, 1209
PspPI GGNCC 3 cut(s) 457, 816, 984
PspPPI RGGWCCY 1 cut(s) 984
PsuI RGATCY 4 cut(s) 626, 1177, 1262, 1304
PteI GCGCGC 1 cut(s) 435
PvuII CAGCTG 3 cut(s) 175, 751, 1469
RsaI GTAC 4 cut(s) 782, 963, 1087, 1435
RsaNI GTAC 4 cut(s) 781, 962, 1086, 1434
RseI CAYNNNNRTG 3 cut(s) 506, 585, 1202
SacI GAGCTC 2 cut(s) 27, 282
SacII CCGCGG 2 cut(s) 142, 165
SaqAI TTAA 3 cut(s) 1004, 1254, 1422
Sau3AI GATC 7 cut(s) 391, 574, 626, 1177, 1247, 1262, 1304
Sau96I GGNCC 3 cut(s) 457, 816, 984
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 5 cut(s) 2, 142, 347, 469, 1306
ScrFI CCNGG 5 cut(s) 343, 464, 465, 716, 1431
SduI GDGCHC 3 cut(s) 27, 282, 1199
SfaNI GCATC 3 cut(s) 363, 589, 728
SfoI GGCGCC 1 cut(s) 104
Sfr303I CCGCGG 2 cut(s) 142, 165
SfuI TTCGAA 2 cut(s) 39, 866
SgrBI CCGCGG 2 cut(s) 142, 165
SinI GGWCC 3 cut(s) 457, 816, 984
SmaI CCCGGG 1 cut(s) 465
SmiMI CAYNNNNRTG 3 cut(s) 506, 585, 1202
SpeI ACTAGT 1 cut(s) 1144
Sse9I AATT 5 cut(s) 545, 894, 907, 915, 1231
SspDI GGCGCC 1 cut(s) 102
SspMI CTAG 3 cut(s) 947, 1145, 1188
SstI GAGCTC 2 cut(s) 27, 282
StyD4I CCNGG 5 cut(s) 341, 462, 463, 714, 1429
StyI CCWWGG 1 cut(s) 1454
TaaI ACNGT 3 cut(s) 428, 882, 1273
TaiI ACGT 1 cut(s) 227
TaqI TCGA 5 cut(s) 39, 65, 169, 866, 1337
TasI AATT 5 cut(s) 545, 894, 907, 915, 1231
TatI WGTACW 3 cut(s) 780, 961, 1085
TauI GCSGC 8 cut(s) 103, 130, 164, 167, 332, 335, 367, 696
TfiI GAWTC 7 cut(s) 30, 41, 301, 1016, 1103, 1478, 1520
Tru1I TTAA 3 cut(s) 1004, 1254, 1422
Tru9I TTAA 3 cut(s) 1004, 1254, 1422
TseFI GTSAC 2 cut(s) 134, 727
TseI GCWGC 2 cut(s) 412, 737
Tsp45I GTSAC 2 cut(s) 134, 727
TspDTI ATGAA 3 cut(s) 534, 635, 1244
TspGWI ACGGA 1 cut(s) 44
TspMI CCCGGG 1 cut(s) 463
VneI GTGCAC 1 cut(s) 1195
VpaK11BI GGWCC 3 cut(s) 457, 816, 984
XapI RAATTY 3 cut(s) 545, 907, 1231
XbaI TCTAGA 1 cut(s) 946
XceI RCATGY 4 cut(s) 412, 700, 781, 1137
XcmI CCANNNNNNNNNTGG 1 cut(s) 1545
XmaI CCCGGG 1 cut(s) 463
XmnI GAANNNNTTC 1 cut(s) 907
XspI CTAG 3 cut(s) 947, 1145, 1188
ZrmI AGTACT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.