Rw5G046820

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0011473
Physical Location & Seq
Reverse (-)
81114218 .. 81117707
3490 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G046820.1

Sequence Viewer

Length: 1647 bp
ATGGCAGACTCCCCCTACCAAGAGCTCCGATTCGGCTTCGAATCGGCTCGGCTCCGTCTAGGCTCGGCGTCTCTAAGCCCCCTCCTATCCTCCCCCTCCACGCGGCGCCTCTCCATTGGAAGAGCCGGGCGGCCGAGTTGCCGCGGGCGTAACAATGCACCCGCGGCGGCTCGACAGCTGTCCTGGATGTCCCTCCAGGGGTGGCTGGCAGACGCGGACGAGGCCACGTCGGCTCGAGCCATTAAGGGGGGCTTGGAGCCGGAGCAAGCCGTGGCTTGGGAGCTCTTTACCCCCATCCAGAGGATTCTCTTTGTCGCCGTTATAAGCGTCGCCGCCGCGGAGTCGAAGAAGAACCGCCTCGTTTCGCAGCTGAAGAAATCTGTGGAGTTTAGGGATCAGGTGTTATCGAACATGCAGCAGAAGCTTGACAGTCTATGCGCGCAGATAAGTAACATAAAGGACCACTCTGGAACTGTGACTCCGGTCATGTCCCCAATGAAGAACATAGAATTGCAATCCAATGAAGAGTTTGGTTGTGCTAAAATCAAATTTGTTGATTGCGGTTGTTGGCTTTGTGATCAACATCGTGATCTTTCTGATGGTCTGGTGGGTAATAATGATATGAAAGGATCCAATGGGTATGAGATGCTGCAATATAAAATGTCTCTCGAGCATGTTGTAGCAGAGCAAGAGGAGCGCCGCATGTCTGATTTATCAGACATGGCATCAAGTGTCACATCTGCTGCTGACTTCCAGCTGAACAGCTTAGCTATTGAACAAGACATGCACAATCTCAGAAGGGATTGTCAAGAGAAAGATGGGACCATAAGGGACCTAACCTCTTTGCTCCACTCATCTGAAACTGCTGGTTCAAAGAGGATTGCAGAGTTGGAGGACGTAATACGTAGGAAAAACTCTATAATTACAAGACTAAAGAGGGACATGGCGGTTTTAGAGCAGAAGGTAGTACACCATGCAAGGCTTCGGAGATCCTCTTACTCTTCTTCTTCCTCAGATGATGCCGACTTCACAGACCCTCTTCCAAAAGTTCCACACATGGCAGACAATCTTCTTTATGATATGGATAGTACTACTAGCCCTTCGTCTTCCGATTCAGATAGTTCCCCTCCTGTGAACCGAGCATGTGCTCCTGTTTATAGAAATCCAGAGATTGCTAAAACTCTAGAGACTTCTTCTCAGACTTTTGAGTCTGCTTCAATAGGCCAGAAATCAGTGCCAGAAAAGGTCTCAATTTCTATGGTGGAACAACCATCTAGCCGGCGCACATCAGTGTCTCCTTTGAAAGAGATAACTATGAATTCAAGGCATTTACGATCAGTGAGCACAAAATCTCGACCAGTGAGTCCAAGATGGCAACCATTGAGTCCAAGGTCCCAACCAGCAAGTCCCTTATCCCCCTTTTCAAAAAGACCTCAACCAGCAAGTCCAAGTTCCCGACCAGCAAGTCCCTTATCCCCCTTACCAAAAAAATCTCAGCCAGCCAGTTCTATAAAAAAATCCAGTACATCACAAACTTCAAGGTCAAGGCAGTTATCAGCTAGTGGGGATTCAAAAATGAGTACAAGGCGTTCTCTGCCTCAACGAAAGGAATCAAAGGATGCTATTCCACATAAGAGATGGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

548

Amino Acids

60.47

Weight (kDa)

9.53

Isoelectric Point (pI)

83.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011473)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12930
fragaria_vesca FvH4_3g43290 FvH4_3g43290 FvH4_3g43290 FvH4_3g43290
malus_domestica MD11G1028000.v1.1
prunus_persica Prupe.6G022100_v2.0.a1 Prupe.6G022100_v2.0.a1
pyrus_communis pycom03g01970 pycom11g02160
rosa_chinensis RchiOBHm_Chr5g0077351
rosa_laevigata RLG00000036690
rosa_multiflora Rmu_sc0005942.1_g000002
rosa_roxburghii Rroxscaffold_1G00004550
rosa_rugosa Rorug05G0454400
rosa_samantha Rh5AG509300 Rh5BG530800 Rh5CG555100 Rh5DG543000
rosa_wichuraiana Rw5G046820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 323
AasI GACNNNNNNGTC 3 cut(s) 1207, 1362, 1464
AccB1I GGYRCC 1 cut(s) 105
AccII CGCG 6 cut(s) 103, 144, 164, 215, 338, 440
AclWI GGATC 4 cut(s) 402, 624, 637, 984
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 2 cut(s) 548, 1318
AcuI CTGAAG 1 cut(s) 392
AcyI GRCGYC 2 cut(s) 68, 106
AfaI GTAC 4 cut(s) 969, 1090, 1525, 1582
AfiI CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
AgsI TTSAA 8 cut(s) 776, 873, 1218, 1303, 1323, 1425, 1539, 1572
AjiI CACGTC 1 cut(s) 228
AjnI CCWGG 2 cut(s) 182, 195
AleI CACNNNNGTG 1 cut(s) 1289
AloI GAACNNNNNNTCC 2 cut(s) 463, 495
AluBI AGCT 9 cut(s) 25, 178, 283, 370, 424, 757, 765, 770, 1559
AluI AGCT 9 cut(s) 25, 178, 283, 370, 424, 757, 765, 770, 1559
Alw21I GWGCWC 4 cut(s) 27, 285, 1150, 1346
Alw26I GTCTC 5 cut(s) 75, 669, 1181, 1252, 1299
AlwI GGATC 4 cut(s) 402, 624, 637, 984
Ama87I CYCGRG 2 cut(s) 234, 668
AoxI GGCC 3 cut(s) 131, 222, 1222
ApeKI GCWGC 4 cut(s) 367, 415, 649, 743
ApoI RAATTY 2 cut(s) 548, 1318
AspLEI GCGC 5 cut(s) 108, 440, 442, 699, 1284
AspS9I GGNCC 4 cut(s) 460, 822, 832, 1392
AsuC2I CCSGG 1 cut(s) 127
AsuII TTCGAA 1 cut(s) 39
AvaI CYCGRG 2 cut(s) 234, 668
AvaII GGWCC 4 cut(s) 460, 822, 832, 1392
BamHI GGATCC 1 cut(s) 629
BanI GGYRCC 1 cut(s) 105
BanII GRGCYC 2 cut(s) 27, 285
BbsI GAAGAC 1 cut(s) 1098
Bbv12I GWGCWC 4 cut(s) 27, 285, 1150, 1346
BbvI GCAGC 4 cut(s) 379, 427, 636, 730
BccI CCATC 6 cut(s) 302, 593, 812, 1279, 1365, 1632
BceAI ACGGC 2 cut(s) 254, 302
BciT130I CCWGG 2 cut(s) 184, 197
BclI TGATCA 1 cut(s) 577
BcnI CCSGG 1 cut(s) 127
BcoDI GTCTC 5 cut(s) 75, 669, 1181, 1252, 1299
BfaI CTAG 5 cut(s) 59, 1095, 1184, 1275, 1560
BfoI RGCGCY 2 cut(s) 109, 700
BglI GCCNNNNNGGC 1 cut(s) 230
BlpI GCTNAGC 1 cut(s) 766
BmcAI AGTACT 1 cut(s) 1090
Bme1390I CCNGG 3 cut(s) 127, 184, 197
Bme18I GGWCC 4 cut(s) 460, 822, 832, 1392
BmeT110I CYCGRG 2 cut(s) 234, 668
BmgBI CACGTC 1 cut(s) 228
BmgT120I GGNCC 4 cut(s) 460, 822, 832, 1392
BmiI GGNNCC 7 cut(s) 53, 107, 258, 631, 823, 833, 1394
BmrFI CCNGG 3 cut(s) 127, 184, 197
BmsI GCATC 4 cut(s) 636, 734, 1009, 1609
BoxI GACNNNNGTC 2 cut(s) 178, 482
BpiI GAAGAC 1 cut(s) 1098
BpmI CTGGAG 1 cut(s) 179
Bpu1102I GCTNAGC 1 cut(s) 766
Bpu14I TTCGAA 1 cut(s) 39
BpuMI CCSGG 1 cut(s) 127
BsaAI YACGTR 1 cut(s) 905
BsaBI GATNNNNATC 1 cut(s) 582
BsaHI GRCGYC 2 cut(s) 68, 106
BsaI GGTCTC 1 cut(s) 1252
BsaJI CCNNGG 6 cut(s) 142, 162, 196, 270, 336, 1388
BsaWI WCCGGW 1 cut(s) 481
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
Bse118I RCCGGY 1 cut(s) 1278
Bse1I ACTGG 3 cut(s) 1358, 1503, 1521
Bse8I GATNNNNATC 1 cut(s) 582
BseBI CCWGG 2 cut(s) 184, 197
BseDI CCNNGG 6 cut(s) 142, 162, 196, 270, 336, 1388
BseGI GGATG 3 cut(s) 192, 294, 1624
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
BseMII CTCAG 4 cut(s) 808, 1026, 1211, 1508
BseNI ACTGG 3 cut(s) 1358, 1503, 1521
BsePI GCGCGC 1 cut(s) 438
BseRI GAGGAG 1 cut(s) 707
BseX3I CGGCCG 1 cut(s) 131
BseXI GCAGC 4 cut(s) 379, 427, 636, 730
Bsh1236I CGCG 6 cut(s) 103, 144, 164, 215, 338, 440
Bsh1285I CGRYCG 1 cut(s) 134
BshFI GGCC 3 cut(s) 133, 224, 1224
BshNI GGYRCC 1 cut(s) 105
BsiEI CGRYCG 1 cut(s) 134
BsiHKAI GWGCWC 4 cut(s) 27, 285, 1150, 1346
BsiHKCI CYCGRG 2 cut(s) 234, 668
BsiSI CCGG 4 cut(s) 126, 260, 482, 1279
BslFI GGGAC 8 cut(s) 175, 475, 835, 845, 953, 1378, 1392, 1452
BslI CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
BsmAI GTCTC 5 cut(s) 75, 669, 1181, 1252, 1299
BsmBI CGTCTC 1 cut(s) 75
BsmFI GGGAC 8 cut(s) 175, 475, 835, 845, 953, 1378, 1392, 1452
BsnI GGCC 3 cut(s) 133, 224, 1224
Bso31I GGTCTC 1 cut(s) 1252
BsoBI CYCGRG 2 cut(s) 234, 668
Bsp119I TTCGAA 1 cut(s) 39
Bsp1286I GDGCHC 4 cut(s) 27, 285, 1150, 1346
Bsp143I GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
Bsp1720I GCTNAGC 1 cut(s) 766
BspANI GGCC 3 cut(s) 133, 224, 1224
BspCNI CTCAG 4 cut(s) 807, 1025, 1210, 1507
BspFNI CGCG 6 cut(s) 103, 144, 164, 215, 338, 440
BspLI GGNNCC 7 cut(s) 53, 107, 258, 631, 823, 833, 1394
BspPI GGATC 4 cut(s) 402, 624, 637, 984
BspQI GCTCTTC 1 cut(s) 115
BspT104I TTCGAA 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 105
BspTNI GGTCTC 1 cut(s) 1252
BsrFI RCCGGY 1 cut(s) 1278
BsrI ACTGG 3 cut(s) 1358, 1503, 1521
BssAI RCCGGY 1 cut(s) 1278
BssECI CCNNGG 6 cut(s) 142, 162, 196, 270, 336, 1388
BssHII GCGCGC 1 cut(s) 438
BssMI GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
BssNI GRCGYC 2 cut(s) 68, 106
BssT1I CCWWGG 1 cut(s) 1388
Bst2UI CCWGG 2 cut(s) 184, 197
Bst4CI ACNGT 2 cut(s) 431, 475
Bst6I CTCTTC 4 cut(s) 115, 519, 1006, 1044
BstACI GRCGYC 2 cut(s) 68, 106
BstBAI YACGTR 1 cut(s) 905
BstBI TTCGAA 1 cut(s) 39
BstC8I GCNNGC 6 cut(s) 146, 207, 267, 440, 1280, 1500
BstDEI CTNAG 7 cut(s) 74, 766, 794, 1012, 1197, 1494, 1644
BstDSI CCRYGG 4 cut(s) 142, 162, 270, 336
BstF5I GGATG 3 cut(s) 192, 294, 1624
BstFNI CGCG 6 cut(s) 103, 144, 164, 215, 338, 440
BstH2I RGCGCY 2 cut(s) 109, 700
BstHHI GCGC 5 cut(s) 108, 440, 442, 699, 1284
BstKTI GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
BstMAI GTCTC 5 cut(s) 75, 669, 1181, 1252, 1299
BstMBI GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
BstMCI CGRYCG 1 cut(s) 134
BstMWI GCNNNNNNNGC 6 cut(s) 164, 221, 230, 421, 694, 1594
BstNI CCWGG 2 cut(s) 184, 197
BstNSI RCATGY 5 cut(s) 415, 677, 706, 787, 1146
BstPAI GACNNNNGTC 2 cut(s) 178, 482
BstSCI CCNGG 3 cut(s) 125, 182, 195
BstSNI TACGTA 1 cut(s) 905
BstUI CGCG 6 cut(s) 103, 144, 164, 215, 338, 440
BstV1I GCAGC 4 cut(s) 379, 427, 636, 730
BstV2I GAAGAC 1 cut(s) 1098
BstX2I RGATCY 2 cut(s) 629, 989
BstYI RGATCY 2 cut(s) 629, 989
BstZI CGGCCG 1 cut(s) 131
BsuRI GGCC 3 cut(s) 133, 224, 1224
BtgI CCRYGG 4 cut(s) 142, 162, 270, 336
BtrI CACGTC 1 cut(s) 228
BtsCI GGATG 3 cut(s) 192, 294, 1624
BtsIMutI CAGTG 4 cut(s) 1239, 1296, 1344, 1365
Cac8I GCNNGC 6 cut(s) 146, 207, 267, 440, 1280, 1500
CfoI GCGC 5 cut(s) 108, 440, 442, 699, 1284
Cfr10I RCCGGY 1 cut(s) 1278
Cfr13I GGNCC 4 cut(s) 460, 822, 832, 1392
Cfr42I CCGCGG 3 cut(s) 145, 165, 339
CseI GACGC 3 cut(s) 57, 221, 316
Csp6I GTAC 4 cut(s) 968, 1089, 1524, 1581
CviQI GTAC 4 cut(s) 968, 1089, 1524, 1581
DdeI CTNAG 7 cut(s) 74, 766, 794, 1012, 1197, 1494, 1644
DinI GGCGCC 1 cut(s) 107
DpnI GATC 6 cut(s) 396, 579, 591, 631, 991, 1336
DpnII GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
DrdI GACNNNNNNGTC 3 cut(s) 1207, 1362, 1464
DseDI GACNNNNNNGTC 3 cut(s) 1207, 1362, 1464
EaeI YGGCCR 1 cut(s) 131
EagI CGGCCG 1 cut(s) 131
Eam1104I CTCTTC 4 cut(s) 115, 519, 1006, 1044
EarI CTCTTC 4 cut(s) 115, 519, 1006, 1044
Ecl136II GAGCTC 2 cut(s) 25, 283
EclXI CGGCCG 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 905
Eco130I CCWWGG 1 cut(s) 1388
Eco24I GRGCYC 2 cut(s) 27, 285
Eco31I GGTCTC 1 cut(s) 1252
Eco47I GGWCC 4 cut(s) 460, 822, 832, 1392
Eco52I CGGCCG 1 cut(s) 131
Eco53kI GAGCTC 2 cut(s) 25, 283
Eco57I CTGAAG 1 cut(s) 392
Eco88I CYCGRG 2 cut(s) 234, 668
EcoICRI GAGCTC 2 cut(s) 25, 283
EcoO109I RGGNCCY 2 cut(s) 832, 1392
EcoRI GAATTC 1 cut(s) 1318
EcoRII CCWGG 2 cut(s) 182, 195
EcoT14I CCWWGG 1 cut(s) 1388
EcoT38I GRGCYC 2 cut(s) 27, 285
EgeI GGCGCC 1 cut(s) 107
EheI GGCGCC 1 cut(s) 107
ErhI CCWWGG 1 cut(s) 1388
Esp3I CGTCTC 1 cut(s) 75
FalI AAGNNNNNCTT 2 cut(s) 236, 268
FaqI GGGAC 8 cut(s) 175, 475, 835, 845, 953, 1378, 1392, 1452
FauI CCCGC 2 cut(s) 137, 169
FbaI TGATCA 1 cut(s) 577
FokI GGATG 3 cut(s) 199, 281, 1631
FriOI GRGCYC 2 cut(s) 27, 285
FspBI CTAG 5 cut(s) 59, 1095, 1184, 1275, 1560
GlaI GCGC 5 cut(s) 107, 439, 441, 698, 1283
GsuI CTGGAG 1 cut(s) 179
HaeII RGCGCY 2 cut(s) 109, 700
HaeIII GGCC 3 cut(s) 133, 224, 1224
HapII CCGG 4 cut(s) 126, 260, 482, 1279
HgaI GACGC 3 cut(s) 57, 221, 316
HhaI GCGC 5 cut(s) 108, 440, 442, 699, 1284
Hin1I GRCGYC 2 cut(s) 68, 106
Hin6I GCGC 5 cut(s) 106, 438, 440, 697, 1282
HinP1I GCGC 5 cut(s) 106, 438, 440, 697, 1282
HindIII AAGCTT 1 cut(s) 422
HpaII CCGG 4 cut(s) 126, 260, 482, 1279
Hpy166II GTNNAC 2 cut(s) 970, 1135
Hpy188III TCNNGA 9 cut(s) 298, 468, 587, 668, 809, 1166, 1184, 1353, 1455
Hpy8I GTNNAC 2 cut(s) 970, 1135
Hpy99I CGWCG 2 cut(s) 232, 332
HpyAV CCTTC 3 cut(s) 792, 955, 1110
HpyCH4III ACNGT 2 cut(s) 431, 475
HpyCH4IV ACGT 3 cut(s) 227, 897, 904
HpyCH4V TGCA 7 cut(s) 158, 415, 514, 652, 787, 884, 977
HpyF10VI GCNNNNNNNGC 6 cut(s) 164, 221, 230, 421, 694, 1594
HpyF3I CTNAG 7 cut(s) 74, 766, 794, 1012, 1197, 1494, 1644
HpySE526I ACGT 3 cut(s) 227, 897, 904
Hsp92I GRCGYC 2 cut(s) 68, 106
HspAI GCGC 5 cut(s) 106, 438, 440, 697, 1282
KasI GGCGCC 1 cut(s) 105
KroI GCCGGC 1 cut(s) 1278
KroNI GCCGGC 1 cut(s) 1280
Ksp22I TGATCA 1 cut(s) 577
KspI CCGCGG 3 cut(s) 145, 165, 339
Kzo9I GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
LguI GCTCTTC 1 cut(s) 115
LmnI GCTCC 8 cut(s) 30, 57, 256, 262, 280, 694, 852, 1153
Lsp1109I GCAGC 4 cut(s) 379, 427, 636, 730
LweI GCATC 4 cut(s) 636, 734, 1009, 1609
MaeI CTAG 5 cut(s) 59, 1095, 1184, 1275, 1560
MaeII ACGT 3 cut(s) 227, 897, 904
MaeIII GTNAC 4 cut(s) 149, 449, 475, 733
MalI GATC 6 cut(s) 396, 579, 591, 631, 991, 1336
MboI GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
MflI RGATCY 2 cut(s) 629, 989
MhlI GDGCHC 4 cut(s) 27, 285, 1150, 1346
MluCI AATT 5 cut(s) 509, 548, 921, 1251, 1318
Mly113I GGCGCC 1 cut(s) 106
MlyI GAGTC 6 cut(s) 2, 350, 472, 1217, 1372, 1393
MmeI TCCRAC 1 cut(s) 870
MroNI GCCGGC 1 cut(s) 1278
MseI TTAA 1 cut(s) 243
MslI CAYNNNNRTG 1 cut(s) 1289
MspA1I CMGCKG 6 cut(s) 144, 164, 178, 338, 370, 757
MspI CCGG 4 cut(s) 126, 260, 482, 1279
MspR9I CCNGG 3 cut(s) 127, 184, 197
MvaI CCWGG 2 cut(s) 184, 197
MvnI CGCG 6 cut(s) 103, 144, 164, 215, 338, 440
MwoI GCNNNNNNNGC 6 cut(s) 164, 221, 230, 421, 694, 1594
NaeI GCCGGC 1 cut(s) 1280
NarI GGCGCC 1 cut(s) 106
NciI CCSGG 1 cut(s) 127
NdeII GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
NgoMIV GCCGGC 1 cut(s) 1278
NlaIV GGNNCC 7 cut(s) 53, 107, 258, 631, 823, 833, 1394
NmeAIII GCCGAG 3 cut(s) 28, 44, 159
NmuCI GTSAC 2 cut(s) 475, 733
NspI RCATGY 5 cut(s) 415, 677, 706, 787, 1146
NspV TTCGAA 1 cut(s) 39
OliI CACNNNNGTG 1 cut(s) 1289
PaeR7I CTCGAG 2 cut(s) 234, 668
PauI GCGCGC 1 cut(s) 438
PciSI GCTCTTC 1 cut(s) 115
PdiI GCCGGC 1 cut(s) 1280
PfeI GAWTC 6 cut(s) 30, 41, 304, 1112, 1568, 1610
PfoI TCCNGGA 1 cut(s) 182
PleI GAGTC 6 cut(s) 2, 349, 472, 1216, 1371, 1392
PluTI GGCGCC 1 cut(s) 109
PpsI GAGTC 6 cut(s) 2, 349, 472, 1216, 1371, 1392
Ppu21I YACGTR 1 cut(s) 905
PpuMI RGGWCCY 2 cut(s) 832, 1392
PshAI GACNNNNGTC 2 cut(s) 178, 482
PsiI TTATAA 1 cut(s) 323
Psp124BI GAGCTC 2 cut(s) 27, 285
Psp5II RGGWCCY 2 cut(s) 832, 1392
Psp6I CCWGG 2 cut(s) 182, 195
PspGI CCWGG 2 cut(s) 182, 195
PspN4I GGNNCC 7 cut(s) 53, 107, 258, 631, 823, 833, 1394
PspPI GGNCC 4 cut(s) 460, 822, 832, 1392
PspPPI RGGWCCY 2 cut(s) 832, 1392
PspXI VCTCGAGB 1 cut(s) 234
PsrI GAACNNNNNNTAC 2 cut(s) 1573, 1605
PsuI RGATCY 2 cut(s) 629, 989
PteI GCGCGC 1 cut(s) 438
PvuII CAGCTG 3 cut(s) 178, 370, 757
RsaI GTAC 4 cut(s) 969, 1090, 1525, 1582
RsaNI GTAC 4 cut(s) 968, 1089, 1524, 1581
RseI CAYNNNNRTG 1 cut(s) 1289
SacI GAGCTC 2 cut(s) 27, 285
SacII CCGCGG 3 cut(s) 145, 165, 339
SapI GCTCTTC 1 cut(s) 115
SaqAI TTAA 1 cut(s) 243
Sau3AI GATC 6 cut(s) 394, 577, 589, 629, 989, 1334
Sau96I GGNCC 4 cut(s) 460, 822, 832, 1392
ScaI AGTACT 1 cut(s) 1090
SchI GAGTC 6 cut(s) 2, 350, 472, 1217, 1372, 1393
ScrFI CCNGG 3 cut(s) 127, 184, 197
SduI GDGCHC 4 cut(s) 27, 285, 1150, 1346
SfaNI GCATC 4 cut(s) 636, 734, 1009, 1609
SfoI GGCGCC 1 cut(s) 107
Sfr274I CTCGAG 2 cut(s) 234, 668
Sfr303I CCGCGG 3 cut(s) 145, 165, 339
SfuI TTCGAA 1 cut(s) 39
SgrBI CCGCGG 3 cut(s) 145, 165, 339
SinI GGWCC 4 cut(s) 460, 822, 832, 1392
SlaI CTCGAG 2 cut(s) 234, 668
SmiMI CAYNNNNRTG 1 cut(s) 1289
SmlI CTYRAG 2 cut(s) 234, 668
SmoI CTYRAG 2 cut(s) 234, 668
SnaBI TACGTA 1 cut(s) 905
Sse9I AATT 5 cut(s) 509, 548, 921, 1251, 1318
SspDI GGCGCC 1 cut(s) 105
SspMI CTAG 5 cut(s) 59, 1095, 1184, 1275, 1560
SstI GAGCTC 2 cut(s) 27, 285
StyD4I CCNGG 3 cut(s) 125, 182, 195
StyI CCWWGG 1 cut(s) 1388
TaaI ACNGT 2 cut(s) 431, 475
TaiI ACGT 3 cut(s) 230, 900, 907
TaqI TCGA 7 cut(s) 39, 172, 235, 344, 407, 669, 1354
TasI AATT 5 cut(s) 509, 548, 921, 1251, 1318
TatI WGTACW 4 cut(s) 967, 1088, 1523, 1580
TauI GCSGC 8 cut(s) 106, 133, 144, 167, 170, 335, 338, 702
TfiI GAWTC 6 cut(s) 30, 41, 304, 1112, 1568, 1610
Tru1I TTAA 1 cut(s) 243
Tru9I TTAA 1 cut(s) 243
TscAI CASTG 4 cut(s) 1239, 1296, 1344, 1365
TseFI GTSAC 2 cut(s) 475, 733
TseI GCWGC 4 cut(s) 367, 415, 649, 743
Tsp45I GTSAC 2 cut(s) 475, 733
TspDTI ATGAA 4 cut(s) 512, 537, 638, 1331
TspGWI ACGGA 1 cut(s) 44
TspRI CASTG 4 cut(s) 1239, 1296, 1344, 1365
VpaK11BI GGWCC 4 cut(s) 460, 822, 832, 1392
XapI RAATTY 2 cut(s) 548, 1318
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 5 cut(s) 415, 677, 706, 787, 1146
XcmI CCANNNNNNNNNTGG 1 cut(s) 1635
XhoI CTCGAG 2 cut(s) 234, 668
XspI CTAG 5 cut(s) 59, 1095, 1184, 1275, 1560
ZrmI AGTACT 1 cut(s) 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.