RchiOBHm_Chr5g0077351

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0011473
Physical Location & Seq
Forward (+)
83292326 .. 83296441
4116 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35194

Sequence Viewer

Length: 1575 bp
ATGGCAGACTCCCCCTACCAAGAGCTCCGATTCGGCTTCGAATCGGCTCGGCTCCGTCTAGGCTCGGCGTCTCTAAGCCCCCTCCTATCCTCCCCCTCCACGCGGCGCCTCTCCATTGGAAGCGCCGGGCGGCCGAGTCGCCGCGGGCGTGACAATGCGCCTGCGGCGGCTAGACAGCTGTCCTGGATGTCCCTCCAGGGGTGGCTGGCAGACGCGGACGAGGCCACGTCGGCTCGAGCCATTAAGGGGGGCTTGGAGCCGGAGCAAGCCGTGGCTTGGGAGCTCTTTACCCCCATCCAGAGGATTCTCTTCGTCGCCGTTATAAGCGTCGCCGCCGCGGAGTCGAAGAAGAACCGCCTCGTTTCGCAGCTGAAGAAATCTGTGGAGTTTAGGGATCAGGTGTTATCGAACATGCAGCAGAAGCTTGACAGTCTATGCGCGCAGATAAGTAACATAAAGGACCACTCTGGAACTGTGACTCCGGTCATGTCCCCAATGAAGAACATAGAATTGCAATCCAATGAAGAGTTTGGTTGTGCTAAAATCAAATTTGTTGATTGCGGTTGTTGGCTTTGTGATCAACATCGTGATCTTTCTGATGGTCTGGTGGGTAATAATGATATGAAAGGATCCAATGGGTATGAGATGCTACAATATAAAATGTCTCTCGATCATGTTGTAGCAGAGCAAGAGGAACGCCGCATGTCTGATTTATCAGACATGGCATCAAGTGTCACATCTGCTGCTGACTTCCAGCTGAACAGCTTAGCTATTGAACAAGACATACACAATCTCAGAAGGGATTGTCAAGAGAAAGATGGGACCATAAGGGAGCTAACCTCTTTGCTCCACTCATCTGAAACTGCTGGTTCAAAGAGGATTGCAGAGTTGGAGGACGTAATACGTAGGAAAAACTCTATAATTACAAGACTAAAGAGGGACATGGCGGTTTTAGAGCAGAAGGTAGTACACCATGCAAGGCTTCGGAGATCCTCTTACTCTTCTTCCTCAGATGATGCAGACTTCGCAGACCCTCTTCCAAAAGTTCCACACATGGCAGACAATCTTCTTTATGATATGGATAGTACTACTAGCCCTTCGTCTTCCGATTCAGATAGTTCCTCTCCTGTGAACCGAGCATGTGCTCCTGTTTCTAGAACTCCAGAGATTGCTAAAACTCTAGAGACTTCTTCTCAGAGTTTTAAGTCTGCTTCAATAGGCCAGAAATCAGTGCCAGAAAAGGTCTCAATTTCTATGGTGGAACAACCATCTAGCCGGCGCACATCAGTGTCTCCTTTGAAAGAGATAACTATGAATTCAAGGCATTTACGATCAGTGAGCACAAAATCTCGACCAGTGAGTCCAAGATGGCAACCATTGAGTCCAAGGTCCCAACCGGCAAGTCCCTTATCCCCCTTTTCAAAAAGACCTCAACCAGCAAGTCCAAGTTCCCGTCCAGCAAGTCCCTTATCCCCCTTACCAAAAAAATCTCAGCCAGCCAGTTCTATAAAAAATCCAGTACATCACAAACTTCAAGGCCAAGGCAGTTATCAGCTAGTGGGGATTCAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

524

Amino Acids

57.58

Weight (kDa)

9.32

Isoelectric Point (pI)

78.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011473)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12930
fragaria_vesca FvH4_3g43290 FvH4_3g43290 FvH4_3g43290 FvH4_3g43290
malus_domestica MD11G1028000.v1.1
prunus_persica Prupe.6G022100_v2.0.a1 Prupe.6G022100_v2.0.a1
pyrus_communis pycom03g01970 pycom11g02160
rosa_chinensis RchiOBHm_Chr5g0077351
rosa_laevigata RLG00000036690
rosa_multiflora Rmu_sc0005942.1_g000002
rosa_roxburghii Rroxscaffold_1G00004550
rosa_rugosa Rorug05G0454400
rosa_samantha Rh5AG509300 Rh5BG530800 Rh5CG555100 Rh5DG543000
rosa_wichuraiana Rw5G046820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 323
AasI GACNNNNNNGTC 1 cut(s) 1359
AccB1I GGYRCC 1 cut(s) 105
AccII CGCG 5 cut(s) 103, 144, 215, 338, 440
AclWI GGATC 4 cut(s) 402, 624, 637, 984
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 2 cut(s) 548, 1315
AcuI CTGAAG 1 cut(s) 392
AcyI GRCGYC 2 cut(s) 68, 106
AfaI GTAC 3 cut(s) 969, 1087, 1521
AfiI CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
AgsI TTSAA 8 cut(s) 776, 873, 1215, 1300, 1320, 1422, 1535, 1568
AjiI CACGTC 1 cut(s) 228
AjnI CCWGG 2 cut(s) 182, 195
AleI CACNNNNGTG 1 cut(s) 1286
AloI GAACNNNNNNTCC 2 cut(s) 463, 495
Alw21I GWGCWC 4 cut(s) 27, 285, 1147, 1343
Alw26I GTCTC 5 cut(s) 75, 669, 1178, 1249, 1296
AlwI GGATC 4 cut(s) 402, 624, 637, 984
Ama87I CYCGRG 1 cut(s) 234
AoxI GGCC 4 cut(s) 131, 222, 1219, 1537
ApeKI GCWGC 3 cut(s) 367, 415, 743
ApoI RAATTY 2 cut(s) 548, 1315
AspLEI GCGC 6 cut(s) 108, 125, 160, 440, 442, 1281
AspS9I GGNCC 3 cut(s) 460, 822, 1389
AsuC2I CCSGG 1 cut(s) 127
AsuII TTCGAA 1 cut(s) 39
AvaI CYCGRG 1 cut(s) 234
AvaII GGWCC 3 cut(s) 460, 822, 1389
BamHI GGATCC 1 cut(s) 629
BanI GGYRCC 1 cut(s) 105
BanII GRGCYC 2 cut(s) 27, 285
BbsI GAAGAC 1 cut(s) 1095
Bbv12I GWGCWC 4 cut(s) 27, 285, 1147, 1343
BbvI GCAGC 3 cut(s) 379, 427, 730
BccI CCATC 5 cut(s) 302, 593, 812, 1276, 1362
BceAI ACGGC 2 cut(s) 254, 302
BciT130I CCWGG 2 cut(s) 184, 197
BclI TGATCA 1 cut(s) 577
BcnI CCSGG 1 cut(s) 127
BcoDI GTCTC 5 cut(s) 75, 669, 1178, 1249, 1296
BfaI CTAG 7 cut(s) 59, 171, 1092, 1155, 1181, 1272, 1556
BfoI RGCGCY 2 cut(s) 109, 126
BglI GCCNNNNNGGC 1 cut(s) 230
BlpI GCTNAGC 1 cut(s) 766
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 3 cut(s) 127, 184, 197
Bme18I GGWCC 3 cut(s) 460, 822, 1389
BmeT110I CYCGRG 1 cut(s) 234
BmgBI CACGTC 1 cut(s) 228
BmgT120I GGNCC 3 cut(s) 460, 822, 1389
BmiI GGNNCC 6 cut(s) 53, 107, 258, 631, 823, 1391
BmrFI CCNGG 3 cut(s) 127, 184, 197
BmsI GCATC 3 cut(s) 636, 734, 1006
BoxI GACNNNNGTC 2 cut(s) 178, 482
BpiI GAAGAC 1 cut(s) 1095
BplI GAGNNNNNCTC 2 cut(s) 824, 856
BpmI CTGGAG 2 cut(s) 179, 1146
Bpu1102I GCTNAGC 1 cut(s) 766
Bpu14I TTCGAA 1 cut(s) 39
BpuMI CCSGG 1 cut(s) 127
BsaAI YACGTR 1 cut(s) 905
BsaBI GATNNNNATC 1 cut(s) 582
BsaHI GRCGYC 2 cut(s) 68, 106
BsaI GGTCTC 1 cut(s) 1249
BsaJI CCNNGG 6 cut(s) 142, 196, 270, 336, 1385, 1540
BsaWI WCCGGW 1 cut(s) 481
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
Bse118I RCCGGY 2 cut(s) 1275, 1396
Bse1I ACTGG 3 cut(s) 1355, 1500, 1517
Bse8I GATNNNNATC 1 cut(s) 582
BseBI CCWGG 2 cut(s) 184, 197
BseDI CCNNGG 6 cut(s) 142, 196, 270, 336, 1385, 1540
BseGI GGATG 2 cut(s) 192, 294
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
BseMII CTCAG 4 cut(s) 808, 1023, 1208, 1505
BseNI ACTGG 3 cut(s) 1355, 1500, 1517
BsePI GCGCGC 1 cut(s) 438
BseX3I CGGCCG 1 cut(s) 131
BseXI GCAGC 3 cut(s) 379, 427, 730
Bsh1236I CGCG 5 cut(s) 103, 144, 215, 338, 440
Bsh1285I CGRYCG 1 cut(s) 134
BshFI GGCC 4 cut(s) 133, 224, 1221, 1539
BshNI GGYRCC 1 cut(s) 105
BsiEI CGRYCG 1 cut(s) 134
BsiHKAI GWGCWC 4 cut(s) 27, 285, 1147, 1343
BsiHKCI CYCGRG 1 cut(s) 234
BsiSI CCGG 5 cut(s) 126, 260, 482, 1276, 1397
BslFI GGGAC 7 cut(s) 175, 475, 835, 953, 1375, 1389, 1449
BslI CCNNNNNNNGG 5 cut(s) 102, 198, 246, 276, 300
BsmAI GTCTC 5 cut(s) 75, 669, 1178, 1249, 1296
BsmBI CGTCTC 1 cut(s) 75
BsmFI GGGAC 7 cut(s) 175, 475, 835, 953, 1375, 1389, 1449
BsnI GGCC 4 cut(s) 133, 224, 1221, 1539
Bso31I GGTCTC 1 cut(s) 1249
BsoBI CYCGRG 1 cut(s) 234
Bsp119I TTCGAA 1 cut(s) 39
Bsp1286I GDGCHC 4 cut(s) 27, 285, 1147, 1343
Bsp143I GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
Bsp1720I GCTNAGC 1 cut(s) 766
BspANI GGCC 4 cut(s) 133, 224, 1221, 1539
BspCNI CTCAG 4 cut(s) 807, 1022, 1207, 1504
BspFNI CGCG 5 cut(s) 103, 144, 215, 338, 440
BspLI GGNNCC 6 cut(s) 53, 107, 258, 631, 823, 1391
BspPI GGATC 4 cut(s) 402, 624, 637, 984
BspT104I TTCGAA 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 105
BspTNI GGTCTC 1 cut(s) 1249
BsrFI RCCGGY 2 cut(s) 1275, 1396
BsrI ACTGG 3 cut(s) 1355, 1500, 1517
BssAI RCCGGY 2 cut(s) 1275, 1396
BssECI CCNNGG 6 cut(s) 142, 196, 270, 336, 1385, 1540
BssHII GCGCGC 1 cut(s) 438
BssMI GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
BssNI GRCGYC 2 cut(s) 68, 106
BssT1I CCWWGG 2 cut(s) 1385, 1540
Bst2UI CCWGG 2 cut(s) 184, 197
Bst4CI ACNGT 2 cut(s) 431, 475
Bst6I CTCTTC 4 cut(s) 314, 519, 1006, 1041
BstACI GRCGYC 2 cut(s) 68, 106
BstBAI YACGTR 1 cut(s) 905
BstBI TTCGAA 1 cut(s) 39
BstC8I GCNNGC 7 cut(s) 146, 162, 207, 267, 440, 1277, 1497
BstDEI CTNAG 6 cut(s) 74, 766, 794, 1009, 1194, 1491
BstDSI CCRYGG 3 cut(s) 142, 270, 336
BstF5I GGATG 2 cut(s) 192, 294
BstFNI CGCG 5 cut(s) 103, 144, 215, 338, 440
BstH2I RGCGCY 2 cut(s) 109, 126
BstHHI GCGC 6 cut(s) 108, 125, 160, 440, 442, 1281
BstKTI GATC 7 cut(s) 397, 580, 592, 632, 673, 992, 1334
BstMAI GTCTC 5 cut(s) 75, 669, 1178, 1249, 1296
BstMBI GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
BstMCI CGRYCG 1 cut(s) 134
BstMWI GCNNNNNNNGC 5 cut(s) 164, 221, 230, 421, 1025
BstNI CCWGG 2 cut(s) 184, 197
BstNSI RCATGY 3 cut(s) 415, 706, 1143
BstPAI GACNNNNGTC 2 cut(s) 178, 482
BstSCI CCNGG 3 cut(s) 125, 182, 195
BstSNI TACGTA 1 cut(s) 905
BstUI CGCG 5 cut(s) 103, 144, 215, 338, 440
BstV1I GCAGC 3 cut(s) 379, 427, 730
BstV2I GAAGAC 1 cut(s) 1095
BstX2I RGATCY 2 cut(s) 629, 989
BstYI RGATCY 2 cut(s) 629, 989
BstZI CGGCCG 1 cut(s) 131
BsuRI GGCC 4 cut(s) 133, 224, 1221, 1539
BtgI CCRYGG 3 cut(s) 142, 270, 336
BtrI CACGTC 1 cut(s) 228
BtsCI GGATG 2 cut(s) 192, 294
BtsIMutI CAGTG 4 cut(s) 1236, 1293, 1341, 1362
Cac8I GCNNGC 7 cut(s) 146, 162, 207, 267, 440, 1277, 1497
CfoI GCGC 6 cut(s) 108, 125, 160, 440, 442, 1281
Cfr10I RCCGGY 2 cut(s) 1275, 1396
Cfr13I GGNCC 3 cut(s) 460, 822, 1389
Cfr42I CCGCGG 2 cut(s) 145, 339
CseI GACGC 3 cut(s) 57, 221, 316
Csp6I GTAC 3 cut(s) 968, 1086, 1520
CviAII CATG 9 cut(s) 412, 487, 674, 703, 721, 943, 974, 1054, 1140
CviQI GTAC 3 cut(s) 968, 1086, 1520
DdeI CTNAG 6 cut(s) 74, 766, 794, 1009, 1194, 1491
DinI GGCGCC 1 cut(s) 107
DpnI GATC 7 cut(s) 396, 579, 591, 631, 672, 991, 1333
DpnII GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
DrdI GACNNNNNNGTC 1 cut(s) 1359
DseDI GACNNNNNNGTC 1 cut(s) 1359
EaeI YGGCCR 1 cut(s) 131
EagI CGGCCG 1 cut(s) 131
Eam1104I CTCTTC 4 cut(s) 314, 519, 1006, 1041
EarI CTCTTC 4 cut(s) 314, 519, 1006, 1041
Ecl136II GAGCTC 2 cut(s) 25, 283
EclXI CGGCCG 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 905
Eco130I CCWWGG 2 cut(s) 1385, 1540
Eco24I GRGCYC 2 cut(s) 27, 285
Eco31I GGTCTC 1 cut(s) 1249
Eco47I GGWCC 3 cut(s) 460, 822, 1389
Eco52I CGGCCG 1 cut(s) 131
Eco53kI GAGCTC 2 cut(s) 25, 283
Eco57I CTGAAG 1 cut(s) 392
Eco88I CYCGRG 1 cut(s) 234
EcoICRI GAGCTC 2 cut(s) 25, 283
EcoO109I RGGNCCY 1 cut(s) 1389
EcoRI GAATTC 1 cut(s) 1315
EcoRII CCWGG 2 cut(s) 182, 195
EcoT14I CCWWGG 2 cut(s) 1385, 1540
EcoT38I GRGCYC 2 cut(s) 27, 285
EgeI GGCGCC 1 cut(s) 107
EheI GGCGCC 1 cut(s) 107
ErhI CCWWGG 2 cut(s) 1385, 1540
Esp3I CGTCTC 1 cut(s) 75
FaeI CATG 9 cut(s) 415, 490, 677, 706, 724, 946, 977, 1057, 1143
FalI AAGNNNNNCTT 2 cut(s) 236, 268
FaqI GGGAC 7 cut(s) 175, 475, 835, 953, 1375, 1389, 1449
FatI CATG 9 cut(s) 411, 486, 673, 702, 720, 942, 973, 1053, 1139
FauI CCCGC 1 cut(s) 137
FbaI TGATCA 1 cut(s) 577
FokI GGATG 2 cut(s) 199, 281
FriOI GRGCYC 2 cut(s) 27, 285
FspBI CTAG 7 cut(s) 59, 171, 1092, 1155, 1181, 1272, 1556
GlaI GCGC 6 cut(s) 107, 124, 159, 439, 441, 1280
GsuI CTGGAG 2 cut(s) 179, 1146
HaeII RGCGCY 2 cut(s) 109, 126
HaeIII GGCC 4 cut(s) 133, 224, 1221, 1539
HapII CCGG 5 cut(s) 126, 260, 482, 1276, 1397
HgaI GACGC 3 cut(s) 57, 221, 316
HhaI GCGC 6 cut(s) 108, 125, 160, 440, 442, 1281
Hin1I GRCGYC 2 cut(s) 68, 106
Hin1II CATG 9 cut(s) 415, 490, 677, 706, 724, 946, 977, 1057, 1143
Hin6I GCGC 6 cut(s) 106, 123, 158, 438, 440, 1279
HinP1I GCGC 6 cut(s) 106, 123, 158, 438, 440, 1279
HindIII AAGCTT 1 cut(s) 422
HpaII CCGG 5 cut(s) 126, 260, 482, 1276, 1397
Hpy166II GTNNAC 2 cut(s) 970, 1132
Hpy188III TCNNGA 9 cut(s) 298, 468, 587, 668, 809, 1155, 1163, 1181, 1350
Hpy8I GTNNAC 2 cut(s) 970, 1132
Hpy99I CGWCG 3 cut(s) 232, 317, 332
HpyAV CCTTC 3 cut(s) 792, 955, 1107
HpyCH4III ACNGT 2 cut(s) 431, 475
HpyCH4IV ACGT 3 cut(s) 227, 897, 904
HpyCH4V TGCA 5 cut(s) 415, 514, 884, 977, 1019
HpyF10VI GCNNNNNNNGC 5 cut(s) 164, 221, 230, 421, 1025
HpyF3I CTNAG 6 cut(s) 74, 766, 794, 1009, 1194, 1491
HpySE526I ACGT 3 cut(s) 227, 897, 904
Hsp92I GRCGYC 2 cut(s) 68, 106
Hsp92II CATG 9 cut(s) 415, 490, 677, 706, 724, 946, 977, 1057, 1143
HspAI GCGC 6 cut(s) 106, 123, 158, 438, 440, 1279
KasI GGCGCC 1 cut(s) 105
KroI GCCGGC 1 cut(s) 1275
KroNI GCCGGC 1 cut(s) 1277
Ksp22I TGATCA 1 cut(s) 577
KspI CCGCGG 2 cut(s) 145, 339
Kzo9I GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
LmnI GCTCC 8 cut(s) 30, 57, 256, 262, 280, 832, 852, 1150
Lsp1109I GCAGC 3 cut(s) 379, 427, 730
LweI GCATC 3 cut(s) 636, 734, 1006
MaeI CTAG 7 cut(s) 59, 171, 1092, 1155, 1181, 1272, 1556
MaeII ACGT 3 cut(s) 227, 897, 904
MaeIII GTNAC 4 cut(s) 149, 449, 475, 733
MalI GATC 7 cut(s) 396, 579, 591, 631, 672, 991, 1333
MboI GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
MflI RGATCY 2 cut(s) 629, 989
MhlI GDGCHC 4 cut(s) 27, 285, 1147, 1343
MluCI AATT 5 cut(s) 509, 548, 921, 1248, 1315
Mly113I GGCGCC 1 cut(s) 106
MlyI GAGTC 6 cut(s) 2, 145, 350, 472, 1369, 1390
MmeI TCCRAC 1 cut(s) 870
MroNI GCCGGC 1 cut(s) 1275
MseI TTAA 2 cut(s) 243, 1203
MslI CAYNNNNRTG 1 cut(s) 1286
MspA1I CMGCKG 5 cut(s) 144, 178, 338, 370, 757
MspI CCGG 5 cut(s) 126, 260, 482, 1276, 1397
MspR9I CCNGG 3 cut(s) 127, 184, 197
MvaI CCWGG 2 cut(s) 184, 197
MvnI CGCG 5 cut(s) 103, 144, 215, 338, 440
MwoI GCNNNNNNNGC 5 cut(s) 164, 221, 230, 421, 1025
NaeI GCCGGC 1 cut(s) 1277
NarI GGCGCC 1 cut(s) 106
NciI CCSGG 1 cut(s) 127
NdeII GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
NgoMIV GCCGGC 1 cut(s) 1275
NlaIII CATG 9 cut(s) 415, 490, 677, 706, 724, 946, 977, 1057, 1143
NlaIV GGNNCC 6 cut(s) 53, 107, 258, 631, 823, 1391
NmeAIII GCCGAG 3 cut(s) 28, 44, 159
NmuCI GTSAC 3 cut(s) 149, 475, 733
NspI RCATGY 3 cut(s) 415, 706, 1143
NspV TTCGAA 1 cut(s) 39
OliI CACNNNNGTG 1 cut(s) 1286
PaeR7I CTCGAG 1 cut(s) 234
PauI GCGCGC 1 cut(s) 438
PcsI WCGNNNNNNNCGW 1 cut(s) 145
PdiI GCCGGC 1 cut(s) 1277
PfeI GAWTC 5 cut(s) 30, 41, 304, 1109, 1564
PfoI TCCNGGA 1 cut(s) 182
PleI GAGTC 6 cut(s) 2, 144, 349, 472, 1368, 1389
PluTI GGCGCC 1 cut(s) 109
PpsI GAGTC 6 cut(s) 2, 144, 349, 472, 1368, 1389
Ppu21I YACGTR 1 cut(s) 905
PpuMI RGGWCCY 1 cut(s) 1389
PshAI GACNNNNGTC 2 cut(s) 178, 482
PsiI TTATAA 1 cut(s) 323
Psp124BI GAGCTC 2 cut(s) 27, 285
Psp5II RGGWCCY 1 cut(s) 1389
Psp6I CCWGG 2 cut(s) 182, 195
PspGI CCWGG 2 cut(s) 182, 195
PspN4I GGNNCC 6 cut(s) 53, 107, 258, 631, 823, 1391
PspPI GGNCC 3 cut(s) 460, 822, 1389
PspPPI RGGWCCY 1 cut(s) 1389
PspXI VCTCGAGB 1 cut(s) 234
PsrI GAACNNNNNNTAC 2 cut(s) 768, 800
PsuI RGATCY 2 cut(s) 629, 989
PteI GCGCGC 1 cut(s) 438
PvuII CAGCTG 3 cut(s) 178, 370, 757
RsaI GTAC 3 cut(s) 969, 1087, 1521
RsaNI GTAC 3 cut(s) 968, 1086, 1520
RseI CAYNNNNRTG 1 cut(s) 1286
SacI GAGCTC 2 cut(s) 27, 285
SacII CCGCGG 2 cut(s) 145, 339
SaqAI TTAA 2 cut(s) 243, 1203
Sau3AI GATC 7 cut(s) 394, 577, 589, 629, 670, 989, 1331
Sau96I GGNCC 3 cut(s) 460, 822, 1389
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 6 cut(s) 2, 145, 350, 472, 1369, 1390
ScrFI CCNGG 3 cut(s) 127, 184, 197
SduI GDGCHC 4 cut(s) 27, 285, 1147, 1343
SfaNI GCATC 3 cut(s) 636, 734, 1006
SfoI GGCGCC 1 cut(s) 107
Sfr274I CTCGAG 1 cut(s) 234
Sfr303I CCGCGG 2 cut(s) 145, 339
SfuI TTCGAA 1 cut(s) 39
SgrBI CCGCGG 2 cut(s) 145, 339
SinI GGWCC 3 cut(s) 460, 822, 1389
SlaI CTCGAG 1 cut(s) 234
SmiMI CAYNNNNRTG 1 cut(s) 1286
SmlI CTYRAG 1 cut(s) 234
SmoI CTYRAG 1 cut(s) 234
SnaBI TACGTA 1 cut(s) 905
Sse9I AATT 5 cut(s) 509, 548, 921, 1248, 1315
SspDI GGCGCC 1 cut(s) 105
SspMI CTAG 7 cut(s) 59, 171, 1092, 1155, 1181, 1272, 1556
SstI GAGCTC 2 cut(s) 27, 285
StyD4I CCNGG 3 cut(s) 125, 182, 195
StyI CCWWGG 2 cut(s) 1385, 1540
TaaI ACNGT 2 cut(s) 431, 475
TaiI ACGT 3 cut(s) 230, 900, 907
TaqI TCGA 6 cut(s) 39, 235, 344, 407, 669, 1351
TasI AATT 5 cut(s) 509, 548, 921, 1248, 1315
TatI WGTACW 3 cut(s) 967, 1085, 1519
TauI GCSGC 8 cut(s) 106, 133, 144, 167, 170, 335, 338, 702
TfiI GAWTC 5 cut(s) 30, 41, 304, 1109, 1564
Tru1I TTAA 2 cut(s) 243, 1203
Tru9I TTAA 2 cut(s) 243, 1203
TscAI CASTG 4 cut(s) 1236, 1293, 1341, 1362
TseFI GTSAC 3 cut(s) 149, 475, 733
TseI GCWGC 3 cut(s) 367, 415, 743
Tsp45I GTSAC 3 cut(s) 149, 475, 733
TspDTI ATGAA 4 cut(s) 512, 537, 638, 1328
TspGWI ACGGA 1 cut(s) 44
TspRI CASTG 4 cut(s) 1236, 1293, 1341, 1362
VpaK11BI GGWCC 3 cut(s) 460, 822, 1389
XapI RAATTY 2 cut(s) 548, 1315
XbaI TCTAGA 2 cut(s) 1154, 1180
XceI RCATGY 3 cut(s) 415, 706, 1143
XhoI CTCGAG 1 cut(s) 234
XspI CTAG 7 cut(s) 59, 171, 1092, 1155, 1181, 1272, 1556
ZrmI AGTACT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.