Rh5DG543000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0011473
Physical Location & Seq
Forward (+)
83582399 .. 83587829
5431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG543000.1

Sequence Viewer

Length: 1650 bp
ATGGCAGACTCCCCCTACCAAGAGCTCCGATTCGGCTTCGAATCGGCTCGGCTCCGTCTCGGCTCGGCGTCTCTAAGCCCCCTCCTATCCTCCCCCTCCACGCGACGCCTCTCCATTGGAAGCGCCGAGCGGCCGAGTCGCCGAGGGCGTAACAATGCGCCCGCGGCGGCGGCTCGACAGCTGTCCTGGATGTCCCTCCAGGGGTGGCTGGCAGACGCGGACGAGGCCACGTCGGCTCGAGCCATAAAGGGGGGCTTGGAGCCGGAGCAAGCCGTGGCTTGGGAGCTCTTTACCCCCATCCAGAGGATTCTCTTCGTCGCCGTTATAAGCGTCGCCGCCGCGGAGTCGAAGAAGAACCGCCTCATTTCGCAGCTGAAGAAATCTGTGGAGTTTAGGGATCAGGTGTTATCGAACATGCAGCAGAAGCTTGACAGTCTATGCGCGCAGATAAGTAACATAAAGGACCACTCTGGAACTGTGACTCCGGTCATGTCCCCAATGAAGAACATAGAATTGCAATCCAATGAAGAGTTTGGTTGTGCTAAAATCAAATTTGTTGATTGCGGTTGTTGGCTTTGTGATCAACATCGTGATCTTTCTGATGGTCTGGTGGGTAATAATGATATGAAAGGATCCAATGGGTATGAGATGCTACAATATAAAATGTCTCTCGAGCATGTTGTAGCAGAGCAAGAGGAGCGCCGCATGTCTGATTTATCAGACATGGCATCAAGTGTCACATCTGCTGCTGACTTCCAGCTGAACAGCTTAGCTATTGAACAAGACATGCACAATCTCAGAAGGGATTGTCAAGAGAAAGATGGGACCATAAGGGAGCTAACCTCTTTGCTCCACTCATCTGAAACTGCTGGTTCAAAGAGGATTGCAGAGTTGGAGGACGTAATACGTAGGAAAAACTCTATAATTACAAGACTAAAGAGGGACATGGCGGTTTTAGAGCAGAAGGTAGTACACCATGCAAGGCTTCGGAGATCCTCTAACTCTTCTTCTTCCTCAGATGATGCAGACTTCGCAGACCCTCTTCCAAAAGTTCCACACATGGCAGACAATCTTCTTTATGATATGGATAGTACTACTAGCCCTTCGTCTTCCGATTCAGATAGTTCCTCTCCTGTGAACCGAGCATGTGCTCCTGTTTCTAGAAATCCAGAGATTGCTAAAACTCTAGAGACTTCTTCTCAGACTTTTGAGTCTGCTTCAACAGGCCAGAAATCAGTGCCAGAAAAGGTCTCAATTTCTATGGTGGAACAACCATCTAGCCGGCGCACATCAGTGTCTCCTTTGAAAGAGATAACTATGAATTCAAGGCATTTACGATCAGTGAGCACAAAATCTCGACCAGTGAGTCCAAGATGGCAACCATTGAGTCCAAGGTCCCAACCAGCAAGTCCCTTATCCCCCTTTTCAAAAAGACCTCAACCAGCAAGTCCAAGTTCCCGACCAGCAAGTCCCTTATCCCCCCTACCAAAAAAATCTCAGCCAGCCAGTTCTATAAAAAAATCCAGTACATCACAAACTTCAAGGCCAAGGCAGTTATCAGCTAGTGGGGATTCAAAAATGAGTAAAAGGCGTTCTCTGCCTCAACGAAAGGAATCAAAGGATGCTACTCCACATAAGAGATGGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

549

Amino Acids

60.47

Weight (kDa)

9.58

Isoelectric Point (pI)

84.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011473)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12930
fragaria_vesca FvH4_3g43290 FvH4_3g43290 FvH4_3g43290 FvH4_3g43290
malus_domestica MD11G1028000.v1.1
prunus_persica Prupe.6G022100_v2.0.a1 Prupe.6G022100_v2.0.a1
pyrus_communis pycom03g01970 pycom11g02160
rosa_chinensis RchiOBHm_Chr5g0077351
rosa_laevigata RLG00000036690
rosa_multiflora Rmu_sc0005942.1_g000002
rosa_roxburghii Rroxscaffold_1G00004550
rosa_rugosa Rorug05G0454400
rosa_samantha Rh5AG509300 Rh5BG530800 Rh5CG555100 Rh5DG543000
rosa_wichuraiana Rw5G046820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 326
AasI GACNNNNNNGTC 3 cut(s) 1210, 1365, 1467
AccBSI CCGCTC 1 cut(s) 130
AccII CGCG 5 cut(s) 103, 164, 218, 341, 443
AclWI GGATC 4 cut(s) 405, 627, 640, 987
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 2 cut(s) 551, 1321
AcuI CTGAAG 1 cut(s) 395
AcyI GRCGYC 2 cut(s) 68, 106
AfaI GTAC 3 cut(s) 972, 1093, 1528
AfiI CCNNNNNNNGG 4 cut(s) 201, 249, 279, 303
AgsI TTSAA 8 cut(s) 779, 876, 1221, 1306, 1326, 1428, 1542, 1575
AjiI CACGTC 1 cut(s) 231
AjnI CCWGG 2 cut(s) 185, 198
AleI CACNNNNGTG 1 cut(s) 1292
AloI GAACNNNNNNTCC 2 cut(s) 466, 498
Alw21I GWGCWC 4 cut(s) 27, 288, 1153, 1349
Alw26I GTCTC 6 cut(s) 62, 75, 672, 1184, 1255, 1302
AlwI GGATC 4 cut(s) 405, 627, 640, 987
Ama87I CYCGRG 2 cut(s) 237, 671
AoxI GGCC 4 cut(s) 131, 225, 1225, 1544
ApeKI GCWGC 3 cut(s) 370, 418, 746
ApoI RAATTY 2 cut(s) 551, 1321
AspLEI GCGC 6 cut(s) 125, 160, 443, 445, 702, 1287
AspS9I GGNCC 3 cut(s) 463, 825, 1395
AsuII TTCGAA 1 cut(s) 39
AvaI CYCGRG 2 cut(s) 237, 671
AvaII GGWCC 3 cut(s) 463, 825, 1395
BamHI GGATCC 1 cut(s) 632
BanII GRGCYC 2 cut(s) 27, 288
BbsI GAAGAC 1 cut(s) 1101
Bbv12I GWGCWC 4 cut(s) 27, 288, 1153, 1349
BbvI GCAGC 3 cut(s) 382, 430, 733
BccI CCATC 6 cut(s) 305, 596, 815, 1282, 1368, 1635
BceAI ACGGC 2 cut(s) 257, 305
BciT130I CCWGG 2 cut(s) 187, 200
BclI TGATCA 1 cut(s) 580
BcoDI GTCTC 6 cut(s) 62, 75, 672, 1184, 1255, 1302
BfaI CTAG 5 cut(s) 1098, 1161, 1187, 1278, 1563
BfoI RGCGCY 2 cut(s) 126, 703
BglI GCCNNNNNGGC 1 cut(s) 233
BlpI GCTNAGC 1 cut(s) 769
BmcAI AGTACT 1 cut(s) 1093
Bme1390I CCNGG 2 cut(s) 187, 200
Bme18I GGWCC 3 cut(s) 463, 825, 1395
BmeT110I CYCGRG 2 cut(s) 237, 671
BmgBI CACGTC 1 cut(s) 231
BmgT120I GGNCC 3 cut(s) 463, 825, 1395
BmiI GGNNCC 5 cut(s) 53, 261, 634, 826, 1397
BmrFI CCNGG 2 cut(s) 187, 200
BmsI GCATC 4 cut(s) 639, 737, 1012, 1612
BoxI GACNNNNGTC 2 cut(s) 181, 485
BpiI GAAGAC 1 cut(s) 1101
BplI GAGNNNNNCTC 2 cut(s) 827, 859
BpmI CTGGAG 1 cut(s) 182
Bpu1102I GCTNAGC 1 cut(s) 769
Bpu14I TTCGAA 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 908
BsaBI GATNNNNATC 1 cut(s) 585
BsaHI GRCGYC 2 cut(s) 68, 106
BsaI GGTCTC 1 cut(s) 1255
BsaJI CCNNGG 7 cut(s) 142, 162, 199, 273, 339, 1391, 1547
BsaWI WCCGGW 1 cut(s) 484
BsaXI ACNNNNNCTCC 2 cut(s) 466, 496
Bsc4I CCNNNNNNNGG 4 cut(s) 201, 249, 279, 303
Bse118I RCCGGY 1 cut(s) 1281
Bse1I ACTGG 3 cut(s) 1361, 1506, 1524
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 2 cut(s) 187, 200
BseDI CCNNGG 7 cut(s) 142, 162, 199, 273, 339, 1391, 1547
BseGI GGATG 3 cut(s) 195, 297, 1627
BseJI GATNNNNATC 1 cut(s) 585
BseLI CCNNNNNNNGG 4 cut(s) 201, 249, 279, 303
BseMII CTCAG 4 cut(s) 811, 1029, 1214, 1511
BseNI ACTGG 3 cut(s) 1361, 1506, 1524
BsePI GCGCGC 1 cut(s) 441
BseRI GAGGAG 1 cut(s) 710
BseX3I CGGCCG 1 cut(s) 131
BseXI GCAGC 3 cut(s) 382, 430, 733
Bsh1236I CGCG 5 cut(s) 103, 164, 218, 341, 443
Bsh1285I CGRYCG 1 cut(s) 134
BshFI GGCC 4 cut(s) 133, 227, 1227, 1546
BsiEI CGRYCG 1 cut(s) 134
BsiHKAI GWGCWC 4 cut(s) 27, 288, 1153, 1349
BsiHKCI CYCGRG 2 cut(s) 237, 671
BsiSI CCGG 3 cut(s) 263, 485, 1282
BslFI GGGAC 7 cut(s) 178, 478, 838, 956, 1381, 1395, 1455
BslI CCNNNNNNNGG 4 cut(s) 201, 249, 279, 303
BsmAI GTCTC 6 cut(s) 62, 75, 672, 1184, 1255, 1302
BsmBI CGTCTC 2 cut(s) 62, 75
BsmFI GGGAC 7 cut(s) 178, 478, 838, 956, 1381, 1395, 1455
BsnI GGCC 4 cut(s) 133, 227, 1227, 1546
Bso31I GGTCTC 1 cut(s) 1255
BsoBI CYCGRG 2 cut(s) 237, 671
Bsp119I TTCGAA 1 cut(s) 39
Bsp1286I GDGCHC 4 cut(s) 27, 288, 1153, 1349
Bsp143I GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
Bsp1720I GCTNAGC 1 cut(s) 769
BspANI GGCC 4 cut(s) 133, 227, 1227, 1546
BspCNI CTCAG 4 cut(s) 810, 1028, 1213, 1510
BspFNI CGCG 5 cut(s) 103, 164, 218, 341, 443
BspLI GGNNCC 5 cut(s) 53, 261, 634, 826, 1397
BspPI GGATC 4 cut(s) 405, 627, 640, 987
BspT104I TTCGAA 1 cut(s) 39
BspTNI GGTCTC 1 cut(s) 1255
BsrBI CCGCTC 1 cut(s) 130
BsrFI RCCGGY 1 cut(s) 1281
BsrI ACTGG 3 cut(s) 1361, 1506, 1524
BssAI RCCGGY 1 cut(s) 1281
BssECI CCNNGG 7 cut(s) 142, 162, 199, 273, 339, 1391, 1547
BssHII GCGCGC 1 cut(s) 441
BssMI GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
BssNI GRCGYC 2 cut(s) 68, 106
BssT1I CCWWGG 2 cut(s) 1391, 1547
Bst2UI CCWGG 2 cut(s) 187, 200
Bst4CI ACNGT 2 cut(s) 434, 478
Bst6I CTCTTC 4 cut(s) 317, 522, 1009, 1047
BstACI GRCGYC 2 cut(s) 68, 106
BstBAI YACGTR 1 cut(s) 908
BstBI TTCGAA 1 cut(s) 39
BstC8I GCNNGC 6 cut(s) 162, 210, 270, 443, 1283, 1503
BstDEI CTNAG 7 cut(s) 74, 769, 797, 1015, 1200, 1497, 1647
BstDSI CCRYGG 3 cut(s) 162, 273, 339
BstF5I GGATG 3 cut(s) 195, 297, 1627
BstFNI CGCG 5 cut(s) 103, 164, 218, 341, 443
BstH2I RGCGCY 2 cut(s) 126, 703
BstHHI GCGC 6 cut(s) 125, 160, 443, 445, 702, 1287
BstKTI GATC 6 cut(s) 400, 583, 595, 635, 995, 1340
BstMAI GTCTC 6 cut(s) 62, 75, 672, 1184, 1255, 1302
BstMBI GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
BstMCI CGRYCG 1 cut(s) 134
BstMWI GCNNNNNNNGC 8 cut(s) 164, 170, 224, 233, 424, 697, 1031, 1597
BstNI CCWGG 2 cut(s) 187, 200
BstNSI RCATGY 5 cut(s) 418, 680, 709, 790, 1149
BstPAI GACNNNNGTC 2 cut(s) 181, 485
BstSCI CCNGG 2 cut(s) 185, 198
BstSNI TACGTA 1 cut(s) 908
BstUI CGCG 5 cut(s) 103, 164, 218, 341, 443
BstV1I GCAGC 3 cut(s) 382, 430, 733
BstV2I GAAGAC 1 cut(s) 1101
BstX2I RGATCY 2 cut(s) 632, 992
BstYI RGATCY 2 cut(s) 632, 992
BstZI CGGCCG 1 cut(s) 131
BsuRI GGCC 4 cut(s) 133, 227, 1227, 1546
BtgI CCRYGG 3 cut(s) 162, 273, 339
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 3 cut(s) 195, 297, 1627
BtsIMutI CAGTG 4 cut(s) 1242, 1299, 1347, 1368
Cac8I GCNNGC 6 cut(s) 162, 210, 270, 443, 1283, 1503
CfoI GCGC 6 cut(s) 125, 160, 443, 445, 702, 1287
Cfr10I RCCGGY 1 cut(s) 1281
Cfr13I GGNCC 3 cut(s) 463, 825, 1395
Cfr42I CCGCGG 2 cut(s) 165, 342
CseI GACGC 4 cut(s) 57, 114, 224, 319
Csp6I GTAC 3 cut(s) 971, 1092, 1527
CviQI GTAC 3 cut(s) 971, 1092, 1527
DdeI CTNAG 7 cut(s) 74, 769, 797, 1015, 1200, 1497, 1647
DpnI GATC 6 cut(s) 399, 582, 594, 634, 994, 1339
DpnII GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
DrdI GACNNNNNNGTC 3 cut(s) 1210, 1365, 1467
DseDI GACNNNNNNGTC 3 cut(s) 1210, 1365, 1467
EaeI YGGCCR 1 cut(s) 131
EagI CGGCCG 1 cut(s) 131
Eam1104I CTCTTC 4 cut(s) 317, 522, 1009, 1047
EarI CTCTTC 4 cut(s) 317, 522, 1009, 1047
Ecl136II GAGCTC 2 cut(s) 25, 286
EclXI CGGCCG 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 908
Eco130I CCWWGG 2 cut(s) 1391, 1547
Eco24I GRGCYC 2 cut(s) 27, 288
Eco31I GGTCTC 1 cut(s) 1255
Eco47I GGWCC 3 cut(s) 463, 825, 1395
Eco52I CGGCCG 1 cut(s) 131
Eco53kI GAGCTC 2 cut(s) 25, 286
Eco57I CTGAAG 1 cut(s) 395
Eco88I CYCGRG 2 cut(s) 237, 671
EcoICRI GAGCTC 2 cut(s) 25, 286
EcoO109I RGGNCCY 1 cut(s) 1395
EcoRI GAATTC 1 cut(s) 1321
EcoRII CCWGG 2 cut(s) 185, 198
EcoT14I CCWWGG 2 cut(s) 1391, 1547
EcoT38I GRGCYC 2 cut(s) 27, 288
ErhI CCWWGG 2 cut(s) 1391, 1547
Esp3I CGTCTC 2 cut(s) 62, 75
FalI AAGNNNNNCTT 2 cut(s) 239, 271
FaqI GGGAC 7 cut(s) 178, 478, 838, 956, 1381, 1395, 1455
FauI CCCGC 1 cut(s) 169
FbaI TGATCA 1 cut(s) 580
FokI GGATG 3 cut(s) 202, 284, 1634
FriOI GRGCYC 2 cut(s) 27, 288
FspBI CTAG 5 cut(s) 1098, 1161, 1187, 1278, 1563
GlaI GCGC 6 cut(s) 124, 159, 442, 444, 701, 1286
GsuI CTGGAG 1 cut(s) 182
HaeII RGCGCY 2 cut(s) 126, 703
HaeIII GGCC 4 cut(s) 133, 227, 1227, 1546
HapII CCGG 3 cut(s) 263, 485, 1282
HgaI GACGC 4 cut(s) 57, 114, 224, 319
HhaI GCGC 6 cut(s) 125, 160, 443, 445, 702, 1287
Hin1I GRCGYC 2 cut(s) 68, 106
Hin6I GCGC 6 cut(s) 123, 158, 441, 443, 700, 1285
HinP1I GCGC 6 cut(s) 123, 158, 441, 443, 700, 1285
HindIII AAGCTT 1 cut(s) 425
HpaII CCGG 3 cut(s) 263, 485, 1282
Hpy166II GTNNAC 2 cut(s) 973, 1138
Hpy8I GTNNAC 2 cut(s) 973, 1138
Hpy99I CGWCG 4 cut(s) 108, 235, 320, 335
HpyAV CCTTC 3 cut(s) 795, 958, 1113
HpyCH4III ACNGT 2 cut(s) 434, 478
HpyCH4IV ACGT 3 cut(s) 230, 900, 907
HpyCH4V TGCA 6 cut(s) 418, 517, 790, 887, 980, 1025
HpyF10VI GCNNNNNNNGC 8 cut(s) 164, 170, 224, 233, 424, 697, 1031, 1597
HpyF3I CTNAG 7 cut(s) 74, 769, 797, 1015, 1200, 1497, 1647
HpySE526I ACGT 3 cut(s) 230, 900, 907
Hsp92I GRCGYC 2 cut(s) 68, 106
HspAI GCGC 6 cut(s) 123, 158, 441, 443, 700, 1285
KroI GCCGGC 1 cut(s) 1281
KroNI GCCGGC 1 cut(s) 1283
Ksp22I TGATCA 1 cut(s) 580
KspI CCGCGG 2 cut(s) 165, 342
Kzo9I GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
LmnI GCTCC 9 cut(s) 30, 57, 259, 265, 283, 697, 835, 855, 1156
Lsp1109I GCAGC 3 cut(s) 382, 430, 733
LweI GCATC 4 cut(s) 639, 737, 1012, 1612
MaeI CTAG 5 cut(s) 1098, 1161, 1187, 1278, 1563
MaeII ACGT 3 cut(s) 230, 900, 907
MaeIII GTNAC 4 cut(s) 149, 452, 478, 736
MalI GATC 6 cut(s) 399, 582, 594, 634, 994, 1339
MbiI CCGCTC 1 cut(s) 130
MboI GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
MflI RGATCY 2 cut(s) 632, 992
MhlI GDGCHC 4 cut(s) 27, 288, 1153, 1349
MluCI AATT 5 cut(s) 512, 551, 924, 1254, 1321
MlyI GAGTC 7 cut(s) 2, 145, 353, 475, 1220, 1375, 1396
MmeI TCCRAC 1 cut(s) 873
MroNI GCCGGC 1 cut(s) 1281
MslI CAYNNNNRTG 1 cut(s) 1292
MspA1I CMGCKG 5 cut(s) 164, 181, 341, 373, 760
MspI CCGG 3 cut(s) 263, 485, 1282
MspR9I CCNGG 2 cut(s) 187, 200
MvaI CCWGG 2 cut(s) 187, 200
MvnI CGCG 5 cut(s) 103, 164, 218, 341, 443
MwoI GCNNNNNNNGC 8 cut(s) 164, 170, 224, 233, 424, 697, 1031, 1597
NaeI GCCGGC 1 cut(s) 1283
NdeII GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
NgoMIV GCCGGC 1 cut(s) 1281
NlaIV GGNNCC 5 cut(s) 53, 261, 634, 826, 1397
NmeAIII GCCGAG 6 cut(s) 28, 39, 44, 151, 159, 167
NmuCI GTSAC 2 cut(s) 478, 736
NspI RCATGY 5 cut(s) 418, 680, 709, 790, 1149
NspV TTCGAA 1 cut(s) 39
OliI CACNNNNGTG 1 cut(s) 1292
PaeR7I CTCGAG 2 cut(s) 237, 671
PauI GCGCGC 1 cut(s) 441
PcsI WCGNNNNNNNCGW 1 cut(s) 145
PdiI GCCGGC 1 cut(s) 1283
PfeI GAWTC 6 cut(s) 30, 41, 307, 1115, 1571, 1613
PfoI TCCNGGA 1 cut(s) 185
PleI GAGTC 7 cut(s) 2, 144, 352, 475, 1219, 1374, 1395
PpsI GAGTC 7 cut(s) 2, 144, 352, 475, 1219, 1374, 1395
Ppu21I YACGTR 1 cut(s) 908
PpuMI RGGWCCY 1 cut(s) 1395
PshAI GACNNNNGTC 2 cut(s) 181, 485
PsiI TTATAA 1 cut(s) 326
Psp124BI GAGCTC 2 cut(s) 27, 288
Psp5II RGGWCCY 1 cut(s) 1395
Psp6I CCWGG 2 cut(s) 185, 198
PspGI CCWGG 2 cut(s) 185, 198
PspN4I GGNNCC 5 cut(s) 53, 261, 634, 826, 1397
PspPI GGNCC 3 cut(s) 463, 825, 1395
PspPPI RGGWCCY 1 cut(s) 1395
PspXI VCTCGAGB 1 cut(s) 237
PsrI GAACNNNNNNTAC 2 cut(s) 1576, 1608
PsuI RGATCY 2 cut(s) 632, 992
PteI GCGCGC 1 cut(s) 441
PvuII CAGCTG 3 cut(s) 181, 373, 760
RsaI GTAC 3 cut(s) 972, 1093, 1528
RsaNI GTAC 3 cut(s) 971, 1092, 1527
RseI CAYNNNNRTG 1 cut(s) 1292
SacI GAGCTC 2 cut(s) 27, 288
SacII CCGCGG 2 cut(s) 165, 342
Sau3AI GATC 6 cut(s) 397, 580, 592, 632, 992, 1337
Sau96I GGNCC 3 cut(s) 463, 825, 1395
ScaI AGTACT 1 cut(s) 1093
SchI GAGTC 7 cut(s) 2, 145, 353, 475, 1220, 1375, 1396
ScrFI CCNGG 2 cut(s) 187, 200
SduI GDGCHC 4 cut(s) 27, 288, 1153, 1349
SfaNI GCATC 4 cut(s) 639, 737, 1012, 1612
Sfr274I CTCGAG 2 cut(s) 237, 671
Sfr303I CCGCGG 2 cut(s) 165, 342
SfuI TTCGAA 1 cut(s) 39
SgrBI CCGCGG 2 cut(s) 165, 342
SinI GGWCC 3 cut(s) 463, 825, 1395
SlaI CTCGAG 2 cut(s) 237, 671
SmiMI CAYNNNNRTG 1 cut(s) 1292
SmlI CTYRAG 2 cut(s) 237, 671
SmoI CTYRAG 2 cut(s) 237, 671
SnaBI TACGTA 1 cut(s) 908
Sse9I AATT 5 cut(s) 512, 551, 924, 1254, 1321
SspMI CTAG 5 cut(s) 1098, 1161, 1187, 1278, 1563
SstI GAGCTC 2 cut(s) 27, 288
StyD4I CCNGG 2 cut(s) 185, 198
StyI CCWWGG 2 cut(s) 1391, 1547
TaaI ACNGT 2 cut(s) 434, 478
TaiI ACGT 3 cut(s) 233, 903, 910
TaqI TCGA 7 cut(s) 39, 175, 238, 347, 410, 672, 1357
TasI AATT 5 cut(s) 512, 551, 924, 1254, 1321
TatI WGTACW 3 cut(s) 970, 1091, 1526
TauI GCSGC 7 cut(s) 133, 167, 170, 173, 338, 341, 705
TfiI GAWTC 6 cut(s) 30, 41, 307, 1115, 1571, 1613
TscAI CASTG 4 cut(s) 1242, 1299, 1347, 1368
TseFI GTSAC 2 cut(s) 478, 736
TseI GCWGC 3 cut(s) 370, 418, 746
Tsp45I GTSAC 2 cut(s) 478, 736
TspDTI ATGAA 4 cut(s) 515, 540, 641, 1334
TspGWI ACGGA 1 cut(s) 44
TspRI CASTG 4 cut(s) 1242, 1299, 1347, 1368
VpaK11BI GGWCC 3 cut(s) 463, 825, 1395
XapI RAATTY 2 cut(s) 551, 1321
XbaI TCTAGA 2 cut(s) 1160, 1186
XceI RCATGY 5 cut(s) 418, 680, 709, 790, 1149
XcmI CCANNNNNNNNNTGG 1 cut(s) 1638
XhoI CTCGAG 2 cut(s) 237, 671
XspI CTAG 5 cut(s) 1098, 1161, 1187, 1278, 1563
ZrmI AGTACT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.