FvH4_3g44320

Callose synthase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
36955031 .. 36977726
22696 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g44320.t1

Sequence Viewer

Length: 5721 bp
ATGGCTCGAGTTGAGGAGCGATGGGAGCGCTTAGTCCGCGCAGTGTTAAGGAGGGAAAGGATGGGGCCTGATTTGTATGGGAGGCATGGTACTGGCATTGCCGGAAACGTTCCGTCATCACTTGCGAATAATAGGGATATTGATGAGATTCTCAGAGCTGCAGATGAAATTCAAGATGAAGATCCCAATATCTCTAGAATCTTATGTGAGCATGGTTATTCGCTGGCCCAAAATCTTGACCCCAATAGTGAAGGAAGGGGAGTATTACAGTTCAAGACTGGATTGATGTCTGTCATTAAGCAAAAGCTTGCAAAGAGGGAGGGGGCAACCATAGATAGAAGCCAGGACATTGTTCGCTTACAAGAGTTCTATAAACTGTATAGACAGAAGAATAATGTTGAACAATTGCGTGAGGAAGAAACACAGTTGAGGGAGTCTGGTGTTCCCAGTGGAAACCTGGGCGAACTAGAAAGGAAAACAGTGAAGAGGAAAAGAGTATTCGCGACTCTGAGAGTTTTGGGCACAGTTTTGGCGCAGCTGACAGAGGACATTCCGGAAGAGCTCAAGCGGGTGATGGAGTTAGATGCCGCAATGACCGAAGACCTAATTGCGTACAATATTATTCCACTGGATGCTCCTAGCATTACTAATATCATCATGTCCTTGGCTGAGGTTCAAGCAGCAGTTTCTGGGTTAAAGTACTTCAGGGGACTACCAAAGTTACCAACAGATTTTCCAATTCCTGCTACACGAGAGCCCGACATGCTTGATTTCCTGCATTATGTATTCGGATTTCAGAAAGACAATGTTTCTAACCAGCGTGAGCATATTGTTCACCTCCTTGCAAATGAGCAATCACGGCTTCGTATTCCTGATGAAACTGAACCTATATTGGATGAGGCTGCGGTGCAAAATGTATTTTTAAAGTCCCTGGACAACTATATTAAGTGGTGTAGCTACTTGTGCATCCAGCCAGTTTGGAGCAATTTGGAGTCAGTTAGCAAGGAGAAAAAGCTTCTGTTTGCTTCCATGTATTGTTTGATCTGGGGTGAAGCAGCCAATGTTAGATTTCTTCCAGAATGCTTGTGCTACATATTTCATCATATGGCAAGGGAAATGGATGAAATTCTGAGGCAGCAGATTGCGCAGCCAGCCAACAGTTGTAATTCTGAAAATGGAGTTTCTTTCCTTGATCAAGTTATATATCCTCTGTTCGAGATCGTGTCAGCGGAAGCTGGAAACAATGAAAATGGACGAGCACCACATTCTGCTTGGCGCAATTATGATGATTTCAATGAGTACTTCTGGTCACTCAGTTGTTTTGATCTCAGTTGGCCCTGGCGCAAAGGTTCATCATTTTTTCAAAAGCCAACGCCAAGGTCAAAGAATATTCTTAAATCAGGCAGAAGTCAACATCGAGGAAAAACTTCATTTGTTGAGCACAGGACATTTCTCCATCTGTATCATAGTTTCCACCGTCTGTGGATATTCCTTGTGATGATGTTTCAGGGACTTGCGATAATTGCATTCAATAACCAAAGGTTTGATGCAAAATGTATTAGAGAAATTCTCAGTCTTGGTCCCACATTCGTCGGAATGAAATTTCTCGAGAGTGTTCTTGATGTTGCTATGATGTATGGCGCCTATTCTACGTCACGGAGCCTAGCAGTTTCTCGAATTTTTCTCCGATTTATTTGGTTTGGCGCTGCATCAGTGGTCATATCTTTTCTTTACGTGAAAGCTCTCCAGGAAGAGAGTAAACAAAATGGAAACCCTGTCATGTACAGATTGTATCTGATGATTGTAGGCATATATGCTGGTATCCAGTTCTTCATTAGCTTTTTCATGCGCATTCCAGCCTGCCACAGTCTGACTAATCAATGCGATCGCTGGTCTCTGATTCGCTTTGTCAAGTGGATGCGCCAGGAACGGTACTATGTTGGACGGGGCATGTTTGAGAGGACTACTGATTTCATCAAGTACATGTTTTTCTGGCTTGTGATTTTGAGTGGAAAGTTTGCATTTGCATACTTCCTGCAGATCAAGCCGTTGGTGGAACCAACCACGATTATAGTGAACACAAATGCGATAACATATACTTGGCATGATTTGGTTTCTGGGAACAACTATAATGTCCTGACAGTTGCTGCTTTATGGGCTCCCGTGGTAGTTATTTATCTTCTAGATCTTCATGTATTTTACACCCTTGTATCTGCTGTGTGGGGATTCTTGCTTGGTGCCAGAGATCGTCTTGGAGAGATTAGGTCACTGGAAGCACTTCATAAACTTTTTGAGCAGTTTCCTGGTGCTTTTATGGATACTCTTCATATCCGCCTGCCTAACAGGGCTTACCATCAGTCGTCAAGCGAGGATATTGAGAAGAACAAGGTTGATGCTAGTCAATTTTCTCCCTTTTGGAATGAAATCATAAATAATCTAAGGGAAGAAGATTATATCACTGACCTAGAAATGGAGCTGCTTGTAATGCCTAAAAACTCTGGAAATCTTCCCTTAGTTCAGTGGCCCCTTTTCCTTCTTGCTAGCAAGATATTTATCGCCAAAGATATTGCTCTCGAAAGTCGGGATTCACAAGATGAGCTTTGGGAAAGAATTTCTAGAGATGACTATATGAAGTATGCTGTACAGGATTGCTTCTATTCCATTAAGCTTATCCTAAGTGAAATATTGGAGGGTGAAGGAAAGATGTGGGTTGAAAGGTTATATGAGGATATTCGAGGAAGCATAGTGAAGAAGAATATTCAAGCTGACTTTCAACTGAACAAGCTGCCACTTGTGATATCAAGAGTTACTGCATTAATGGGCATTCTGAAAAAAGGGGAATCATCTGAATTGGTGAATGGTGCTGTTAAGGCTGTTCAAGACCTTTATGACATTGTGCGCCATGATGTCCTTTCTATTAACCTGAGGGAACACTATGAGACATGGAATTTGTTATCAAAAGCAAGGACGGAAGGTCGGCTGTTTGCAAAGTTGAAGTGGCCCAAGGATCCATCGTTGATAGCACAAGTCAAAAGAGTGTATTCATTGTTGACAATTCAAGATTCTGCTGCCAATGTCCCCCGAAATCTGGAGGCCAGACGTAGGCTGCAGTTCTTCACAAATTCTCTTTTCATGGACATGCCCGAAGCAAGGCCAGTCCGTGAAATGTTATCCTTCAGTGTTTTTACTCCATATTATGCTGAGACTGTGCTCTATAGTATTGCTGAACTCCAGAAGAAAAATGAAGATGGGATATCAGTATTGTTTTACCTTCAAAAGATTTACCCAGATGAGTGGAAGAACTTTCTTTCACGAATTGGCCGTGACGAAAATGCGAATGACTTGGAACTTTTTGATAATCCCTCTGATATTCTTGAGCTTCGGTTTTGGGCGTCTTACCGAGGCCAAACTTTGGCCAGAACTGTTCGTGGGATGATGTATTATAGGAAGGCTCTTATGCTTCAGACCTATTTGGAAAGATTGAATTCTGGAGTATCAGATGTGGAGGCTGCAATTTCTAGTAGTGACGCTGCTGAAACTCGAGCATTTGCGTTATCTCCTGAAGCACGAGCTCAGGCAGACCTGAAGTTTACATATGTAGTTACTTGTCAAATATATGGAAAACAGAAAGAAGGGCAAAAACCTGAGGCAGCTGATATAGCACTGCTTATGCAAAGAAATGAGGCTCTTCGAGTTGCTTTTATTGATGAGGTTGAGACTTTGAAAGATGATGGTAAAGTGAACAGAGAGTACTATTCAAAACTTGTAAAGGCGGATATCAATGGCAAGGACAAGGAAATCTACTCTATAAAGCTGCCTGGAAATCCAAAAATAGGGGAAGGGAAACCGGAGAACCAGAATCATGCAATTGTGTTTACTCGTGGAAATGCTATTCAAACAATTGACATGAATCAGGATAATTATTTTGAGGAAGCTTTGAAAATGAGAAATTTACTTGAAGAATTCCACCGTGATCATGGTTTACGTCGTCCTACAATTCTTGGTGTCAGGGAACATGTCTTTACGGGAAGTGTTTCTTCTCTTGCGTCATTCATGTGCAACCAGGAAACAAGCTTTGTAACTCTAGCTCAGCGGGTTCTTGCAAATCCTTTGAAGGTCCGCATGCATTATGGTCATCCTGATGTGTTTGATAGAGTTTTCCACATAACTCGTGGTGGCATTAGCAAGGCTTCTCGTGTGATTAACATCAGTGAAGATATTTTTGCAGGCTTCAACTCAACTTTACGCCAAGGAAATGTGACTCATCATGAGTATATTCAGGTTGGCAAAGGGCGGGACGTTGGGCTAAACCAAATTGCAGTATTTGAGGGGAAGGTTTCTGGTGGTAATGGTGAACAGGTTCTAAGTCGTGATGTATACAGGCTTGGCCAGCAGTTTGATTTCTTCCGCATGCTGTCATTTTACTTTACTACTGTTGGCTACTACTTCTGTACCCTGTTAACAGTGCTGATGGTTTACGTTTTTCTCTATGGGAAGACATATTTGGCATTATCTGGGGTTGGTGAATCCTTGCAAAATGTGGCTTCTGTAACCAAGAATACCGCACTGACTGCTGCTCTGAATACACAATTTCTCCTTCAAATTGGTATATTTACGGCCGTCCCAATGATCTTAGGCTTCATCTTGGAACAGGGATTCCTGCGGGCCATAGTGACTTTCCTCACAATGCAATTTCAACTTTGTTCTGTCTTCTTCACATTCTCCTTGGGAACCAAAACACATTATTTTGGCCGGACAATTCTCCATGGTGGTGCAAAGTATCAAGCGACAGGCAGGGGTTTTGTAGTCCGGCATGTTAAGTTTACAGAGAATTACAGGCTTTACTCCCGGAGTCATTTTATCAAAGGGTTGGAAGTAGTTCTTTTGTTGGTAGTGTACCTTGCTTATGGATATGATGATGGTGGTGCTCTATCATACATTCTTCTTACAATGACGAGTTGGTTTATGGCTCTTTCTTGGCTTTTTGCTCCCTATTTGTTCAACCCATCTGGGTTTGAGTGGCAGAAGGTAGTGGAGGATTTCCGAGATTGGACGAATTGGCTTCTTTATAGAGGTGGGATTGGAGTTAAGGGTGAAGAAAGCTGGGAAGCTTGGTGGGAGGAAGAACTGTCGCATATTAGAACCTTCAGTGGAAGGATTGCAGAGACAATTTTGAGCCTAAGATTCTTTATCTTCCAGTATGGAATTATCTACCGGCTAGATGTGAAGGGATCCGATACATCACTAACGGTGTATGGCCTCTCATGGATCGTATTTGCGGTGCTTATAATTCTTTTCAAGGTATTCACCTTCAGCCAGAAAATATCTGTCAACTTCCAGCTACTGTTGCGCTTCATTCAAGGTGTCTCCTTCATGTTGGCACTGGCCGGTTTAGCAGTTGCAATCAAATTTACAGATCTGACCATCGCAGACGTTTTTGCTTCCATTTTAGCGTTTGTACCCACTGGGTGGGGAATCCTTTCGATTTGCATAGCTTGGAAACCCTTGATGAAGAAACTGGGCGTGTGGAAATCCATCCGTTCCATTGCCCTTCTTTATGATGCTGGGATGGGTATGGTTATATTCATTCCCATTGCATTGTCATCTTGGTTCCCATTTGTATCAACGTTTCAAACTCGGCTCATGTTCAACCAAGCTTTCAGTCGAGGGTTGGAAATCTCTGTACTACTCGCTGGAAACAATCCCAATTCTGGACTATAG

Protein Analysis

1907

Amino Acids

218.75

Weight (kDa)

8.31

Isoelectric Point (pI)

36.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 338 - 445 1.4e-39 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 842 - 1019 3.7e-46 Callose synthase 1 domain
Glucan_synthase PF02364 1026 - 1716 3.7e-232 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011696)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 5288
Acc16I TGCGCA 2 cut(s) 1146, 1850
AccB1I GGYRCC 2 cut(s) 1640, 2237
AccB7I CCANNNNNTGG 2 cut(s) 3412, 5469
AccI GTMKAC 1 cut(s) 4377
AccII CGCG 2 cut(s) 39, 503
AccIII TCCGGA 1 cut(s) 553
AclI AACGTT 2 cut(s) 108, 5627
AclWI GGATC 6 cut(s) 176, 3002, 3015, 5226, 5239, 5276
AcoI YGGCCR 6 cut(s) 3319, 3414, 4387, 4617, 4750, 5385
AcuI CTGAAG 7 cut(s) 688, 3160, 3446, 3582, 3605, 5131, 5296
AcyI GRCGYC 2 cut(s) 1641, 3392
AdeI CACNNNGTG 1 cut(s) 5469
AfeI AGCGCT 1 cut(s) 29
AfiI CCNNNNNNNGG 8 cut(s) 2470, 3088, 3102, 3150, 3412, 3833, 5469, 5711
AflIII ACRYGT 2 cut(s) 1983, 4015
AhdI GACNNNNNGTC 1 cut(s) 2973
AjnI CCWGG 9 cut(s) 342, 456, 930, 1337, 1746, 1923, 2302, 3817, 4062
AjuI GAANNNNNNNTTGG 2 cut(s) 4487, 4519
AloI GAACNNNNNNTCC 2 cut(s) 4641, 4673
Alw21I GWGCWC 6 cut(s) 564, 1261, 1443, 3213, 3574, 4930
Alw26I GTCTC 6 cut(s) 1899, 2933, 3197, 3710, 5159, 5371
AlwI GGATC 6 cut(s) 176, 3002, 3015, 5226, 5239, 5276
AlwNI CAGNNNCTG 3 cut(s) 689, 2147, 5344
Ama87I CYCGRG 3 cut(s) 6, 1607, 3540
Aor13HI TCCGGA 1 cut(s) 553
Aor51HI AGCGCT 1 cut(s) 29
ArsI GACNNNNNNTTYG 2 cut(s) 2932, 2964
AseI ATTAAT 1 cut(s) 2816
AsiSI GCGATCGC 1 cut(s) 1888
Asp700I GAANNNNTTC 6 cut(s) 1426, 2277, 4033, 4359, 4878, 5479
AspS9I GGNCC 8 cut(s) 65, 226, 1335, 1580, 2523, 3000, 4117, 4665
AsuC2I CCSGG 1 cut(s) 4849
AsuHPI GGTGA 9 cut(s) 583, 827, 1061, 2705, 2866, 4364, 4535, 5105, 5299
AsuNHI GCTAGC 1 cut(s) 2540
AvaI CYCGRG 3 cut(s) 6, 1607, 3540
AvaII GGWCC 2 cut(s) 1580, 4117
AxyI CCTNAGG 2 cut(s) 2924, 3645
BaeGI GKGCMC 1 cut(s) 524
BaeI ACNNNNGTAYC 4 cut(s) 2193, 2226, 4435, 4468
BalI TGGCCA 2 cut(s) 3416, 4389
BamHI GGATCC 2 cut(s) 3007, 5231
BanI GGYRCC 2 cut(s) 1640, 2237
BanII GRGCYC 4 cut(s) 564, 759, 2161, 3574
BauI CACGAG 5 cut(s) 750, 3567, 3879, 4170, 4194
BbsI GAAGAC 3 cut(s) 606, 4502, 4702
Bbv12I GWGCWC 6 cut(s) 564, 1261, 1443, 3213, 3574, 4930
BbvCI CCTCAGC 1 cut(s) 669
BceAI ACGGC 5 cut(s) 875, 2032, 3306, 4604, 4632
BciT130I CCWGG 9 cut(s) 344, 458, 932, 1339, 1748, 1925, 2304, 3819, 4064
BciVI GTATCC 2 cut(s) 1832, 2311
BclI TGATCA 2 cut(s) 1192, 3973
BcnI CCSGG 1 cut(s) 4849
BcoDI GTCTC 6 cut(s) 1899, 2933, 3197, 3710, 5159, 5371
BfmI CTRYAG 5 cut(s) 159, 2036, 3107, 3214, 5717
BfoI RGCGCY 3 cut(s) 31, 1644, 1707
BfuI GTATCC 2 cut(s) 1832, 2311
BglII AGATCT 2 cut(s) 2185, 5416
BlpI GCTNAGC 1 cut(s) 4089
BmcAI AGTACT 3 cut(s) 701, 1301, 3752
Bme18I GGWCC 2 cut(s) 1580, 4117
BmeRI GACNNNNNGTC 1 cut(s) 2973
BmeT110I CYCGRG 3 cut(s) 6, 1607, 3540
BmgT120I GGNCC 8 cut(s) 65, 226, 1335, 1580, 2523, 3000, 4117, 4665
BmrI ACTGGG 3 cut(s) 441, 5475, 5528
BmsI GCATC 8 cut(s) 574, 622, 975, 1537, 1718, 1908, 2383, 5551
BmtI GCTAGC 1 cut(s) 2544
BmuI ACTGGG 3 cut(s) 441, 5475, 5528
BpiI GAAGAC 3 cut(s) 606, 4502, 4702
BplI GAGNNNNNCTC 2 cut(s) 1554, 1586
BpmI CTGGAG 4 cut(s) 1730, 3110, 3215, 3510
Bpu10I CCTNAGC 2 cut(s) 669, 3573
Bpu1102I GCTNAGC 1 cut(s) 4089
BpuEI CTTGAG 2 cut(s) 548, 3395
BpuMI CCSGG 1 cut(s) 4849
BsaAI YACGTR 1 cut(s) 1735
BsaBI GATNNNNATC 3 cut(s) 180, 2552, 4205
BsaHI GRCGYC 2 cut(s) 1641, 3392
BsaI GGTCTC 1 cut(s) 1899
BsaWI WCCGGW 2 cut(s) 553, 3847
BsaXI ACNNNNNCTCC 4 cut(s) 73, 103, 4578, 4608
Bsc4I CCNNNNNNNGG 8 cut(s) 2470, 3088, 3102, 3150, 3412, 3833, 5469, 5711
Bse118I RCCGGY 2 cut(s) 5214, 5387
Bse21I CCTNAGG 2 cut(s) 2924, 3645
Bse3DI GCAATG 4 cut(s) 96, 597, 5544, 5592
Bse8I GATNNNNATC 3 cut(s) 180, 2552, 4205
BseAI TCCGGA 1 cut(s) 553
BseBI CCWGG 9 cut(s) 344, 458, 932, 1339, 1748, 1925, 2304, 3819, 4064
BseJI GATNNNNATC 3 cut(s) 180, 2552, 4205
BseLI CCNNNNNNNGG 8 cut(s) 2470, 3088, 3102, 3150, 3412, 3833, 5469, 5711
BseMI GCAATG 4 cut(s) 96, 597, 5544, 5592
BseRI GAGGAG 1 cut(s) 29
BseSI GKGCMC 1 cut(s) 524
BseX3I CGGCCG 1 cut(s) 4617
BseYI CCCAGC 2 cut(s) 5103, 5564
Bsh1236I CGCG 2 cut(s) 39, 503
Bsh1285I CGRYCG 2 cut(s) 1888, 4620
BshNI GGYRCC 2 cut(s) 1640, 2237
BsiEI CGRYCG 2 cut(s) 1888, 4620
BsiHKAI GWGCWC 6 cut(s) 564, 1261, 1443, 3213, 3574, 4930
BsiHKCI CYCGRG 3 cut(s) 6, 1607, 3540
BsiSI CCGG 8 cut(s) 102, 554, 3848, 4753, 4810, 4849, 5215, 5388
BslFI GGGAC 7 cut(s) 723, 913, 1524, 1566, 3062, 4310, 4607
BslI CCNNNNNNNGG 8 cut(s) 2470, 3088, 3102, 3150, 3412, 3833, 5469, 5711
BsmAI GTCTC 6 cut(s) 1899, 2933, 3197, 3710, 5159, 5371
BsmFI GGGAC 7 cut(s) 723, 913, 1524, 1566, 3062, 4310, 4607
BsmI GAATGC 4 cut(s) 1085, 1526, 1851, 2823
Bso31I GGTCTC 1 cut(s) 1899
BsoBI CYCGRG 3 cut(s) 6, 1607, 3540
Bsp1286I GDGCHC 9 cut(s) 524, 564, 759, 1261, 1443, 2161, 3213, 3574, 4930
Bsp13I TCCGGA 1 cut(s) 553
Bsp1407I TGTACA 2 cut(s) 1782, 2641
Bsp1720I GCTNAGC 1 cut(s) 4089
Bsp19I CCATGG 1 cut(s) 4765
Bsp68I TCGCGA 1 cut(s) 503
BspEI TCCGGA 1 cut(s) 553
BspFNI CGCG 2 cut(s) 39, 503
BspHI TCATGA 1 cut(s) 4267
BspMAI CTGCAG 3 cut(s) 163, 2040, 3111
BspOI GCTAGC 1 cut(s) 2544
BspPI GGATC 6 cut(s) 176, 3002, 3015, 5226, 5239, 5276
BspQI GCTCTTC 2 cut(s) 552, 3693
BspT107I GGYRCC 2 cut(s) 1640, 2237
BspTNI GGTCTC 1 cut(s) 1899
BsrDI GCAATG 4 cut(s) 96, 597, 5544, 5592
BsrFI RCCGGY 2 cut(s) 5214, 5387
BsrGI TGTACA 2 cut(s) 1782, 2641
BssAI RCCGGY 2 cut(s) 5214, 5387
BssNAI GTATAC 1 cut(s) 4378
BssNI GRCGYC 2 cut(s) 1641, 3392
BssSI CACGAG 5 cut(s) 750, 3567, 3879, 4170, 4194
BssT1I CCWWGG 6 cut(s) 663, 1376, 3003, 4249, 4725, 4765
Bst1107I GTATAC 1 cut(s) 4378
Bst2BI CACGAG 5 cut(s) 750, 3567, 3879, 4170, 4194
Bst2UI CCWGG 9 cut(s) 344, 458, 932, 1339, 1748, 1925, 2304, 3819, 4064
Bst6I CTCTTC 5 cut(s) 479, 552, 1746, 2328, 3693
BstACI GRCGYC 2 cut(s) 1641, 3392
BstAPI GCANNNNNTGC 1 cut(s) 4571
BstAUI TGTACA 2 cut(s) 1782, 2641
BstBAI YACGTR 1 cut(s) 1735
BstDSI CCRYGG 2 cut(s) 2163, 4765
BstFNI CGCG 2 cut(s) 39, 503
BstH2I RGCGCY 3 cut(s) 31, 1644, 1707
BstMAI GTCTC 6 cut(s) 1899, 2933, 3197, 3710, 5159, 5371
BstMCI CGRYCG 2 cut(s) 1888, 4620
BstNI CCWGG 9 cut(s) 344, 458, 932, 1339, 1748, 1925, 2304, 3819, 4064
BstNSI RCATGY 8 cut(s) 766, 1954, 1987, 3142, 4019, 4126, 4414, 4817
BstSFI CTRYAG 5 cut(s) 159, 2036, 3107, 3214, 5717
BstSLI GKGCMC 1 cut(s) 524
BstUI CGCG 2 cut(s) 39, 503
BstV2I GAAGAC 3 cut(s) 606, 4502, 4702
BstX2I RGATCY 5 cut(s) 181, 2185, 3007, 5231, 5416
BstXI CCANNNNNNTGG 1 cut(s) 3294
BstYI RGATCY 5 cut(s) 181, 2185, 3007, 5231, 5416
BstZ17I GTATAC 1 cut(s) 4378
BstZI CGGCCG 1 cut(s) 4617
Bsu36I CCTNAGG 2 cut(s) 2924, 3645
BsuI GTATCC 2 cut(s) 1832, 2311
BtgI CCRYGG 2 cut(s) 2163, 4765
BtgZI GCGATG 2 cut(s) 34, 5410
BtsI GCAGTG 2 cut(s) 48, 3662
BtuMI TCGCGA 1 cut(s) 503
CaiI CAGNNNCTG 3 cut(s) 689, 2147, 5344
CciI TCATGA 1 cut(s) 4267
Cfr10I RCCGGY 2 cut(s) 5214, 5387
Cfr13I GGNCC 8 cut(s) 65, 226, 1335, 1580, 2523, 3000, 4117, 4665
CseI GACGC 3 cut(s) 3381, 3536, 4035
DinI GGCGCC 1 cut(s) 1642
DraI TTTAAA 1 cut(s) 924
DraIII CACNNNGTG 1 cut(s) 5469
DriI GACNNNNNGTC 1 cut(s) 2973
EaeI YGGCCR 6 cut(s) 3319, 3414, 4387, 4617, 4750, 5385
EagI CGGCCG 1 cut(s) 4617
Eam1104I CTCTTC 5 cut(s) 479, 552, 1746, 2328, 3693
Eam1105I GACNNNNNGTC 1 cut(s) 2973
EarI CTCTTC 5 cut(s) 479, 552, 1746, 2328, 3693
EciI GGCGGA 2 cut(s) 2321, 3788
Ecl136II GAGCTC 2 cut(s) 562, 3572
EclXI CGGCCG 1 cut(s) 4617
Eco130I CCWWGG 6 cut(s) 663, 1376, 3003, 4249, 4725, 4765
Eco24I GRGCYC 4 cut(s) 564, 759, 2161, 3574
Eco31I GGTCTC 1 cut(s) 1899
Eco32I GATATC 3 cut(s) 2799, 3255, 3778
Eco47I GGWCC 2 cut(s) 1580, 4117
Eco47III AGCGCT 1 cut(s) 29
Eco52I CGGCCG 1 cut(s) 4617
Eco53kI GAGCTC 2 cut(s) 562, 3572
Eco57I CTGAAG 7 cut(s) 688, 3160, 3446, 3582, 3605, 5131, 5296
Eco81I CCTNAGG 2 cut(s) 2924, 3645
Eco88I CYCGRG 3 cut(s) 6, 1607, 3540
EcoICRI GAGCTC 2 cut(s) 562, 3572
EcoO109I RGGNCCY 1 cut(s) 65
EcoRI GAATTC 2 cut(s) 3484, 3962
EcoRII CCWGG 9 cut(s) 342, 456, 930, 1337, 1746, 1923, 2302, 3817, 4062
EcoRV GATATC 3 cut(s) 2799, 3255, 3778
EcoT14I CCWWGG 6 cut(s) 663, 1376, 3003, 4249, 4725, 4765
EcoT22I ATGCAT 1 cut(s) 4128
EcoT38I GRGCYC 4 cut(s) 564, 759, 2161, 3574
EgeI GGCGCC 1 cut(s) 1642
EheI GGCGCC 1 cut(s) 1642
ErhI CCWWGG 6 cut(s) 663, 1376, 3003, 4249, 4725, 4765
FalI AAGNNNNNCTT 6 cut(s) 2583, 2615, 4021, 4053, 4866, 4898
FaqI GGGAC 7 cut(s) 723, 913, 1524, 1566, 3062, 4310, 4607
FauI CCCGC 4 cut(s) 561, 4086, 4287, 4656
FauNDI CATATG 2 cut(s) 1104, 3595
FbaI TGATCA 2 cut(s) 1192, 3973
FblI GTMKAC 1 cut(s) 4377
FriOI GRGCYC 4 cut(s) 564, 759, 2161, 3574
FspAI RTGCGCAY 1 cut(s) 1850
FspI TGCGCA 2 cut(s) 1146, 1850
GsaI CCCAGC 2 cut(s) 5107, 5568
GsuI CTGGAG 4 cut(s) 1730, 3110, 3215, 3510
HaeII RGCGCY 3 cut(s) 31, 1644, 1707
HapII CCGG 8 cut(s) 102, 554, 3848, 4753, 4810, 4849, 5215, 5388
HgaI GACGC 3 cut(s) 3381, 3536, 4035
Hin1I GRCGYC 2 cut(s) 1641, 3392
HincII GTYRAC 4 cut(s) 1412, 3051, 4461, 5332
HindII GTYRAC 4 cut(s) 1412, 3051, 4461, 5332
HindIII AAGCTT 7 cut(s) 305, 1013, 2666, 3933, 4072, 5109, 5655
HpaI GTTAAC 1 cut(s) 4461
HpaII CCGG 8 cut(s) 102, 554, 3848, 4753, 4810, 4849, 5215, 5388
HphI GGTGA 9 cut(s) 583, 827, 1061, 2705, 2866, 4364, 4535, 5105, 5299
Hpy99I CGWCG 2 cut(s) 1595, 3990
HpyCH4IV ACGT 9 cut(s) 108, 1652, 1734, 3100, 3985, 4299, 4479, 5433, 5627
HpySE526I ACGT 9 cut(s) 108, 1652, 1734, 3100, 3985, 4299, 4479, 5433, 5627
Hsp92I GRCGYC 2 cut(s) 1641, 3392
KasI GGCGCC 1 cut(s) 1640
Kpn2I TCCGGA 1 cut(s) 553
Ksp22I TGATCA 2 cut(s) 1192, 3973
KspAI GTTAAC 1 cut(s) 4461
LguI GCTCTTC 2 cut(s) 552, 3693
LmnI GCTCC 8 cut(s) 16, 25, 640, 981, 1659, 2164, 2473, 4993
LweI GCATC 8 cut(s) 574, 622, 975, 1537, 1718, 1908, 2383, 5551
MaeII ACGT 9 cut(s) 108, 1652, 1734, 3100, 3985, 4299, 4479, 5433, 5627
MfeI CAATTG 3 cut(s) 404, 3867, 3900
MflI RGATCY 5 cut(s) 181, 2185, 3007, 5231, 5416
MhlI GDGCHC 9 cut(s) 524, 564, 759, 1261, 1443, 2161, 3213, 3574, 4930
MlsI TGGCCA 2 cut(s) 3416, 4389
MluNI TGGCCA 2 cut(s) 3416, 4389
Mly113I GGCGCC 1 cut(s) 1641
MlyI GAGTC 5 cut(s) 443, 499, 1001, 4255, 4861
MmeI TCCRAC 4 cut(s) 1573, 1921, 4851, 5652
Mox20I TGGCCA 2 cut(s) 3416, 4389
Mph1103I ATGCAT 1 cut(s) 4128
MroI TCCGGA 1 cut(s) 553
MroXI GAANNNNTTC 6 cut(s) 1426, 2277, 4033, 4359, 4878, 5479
MscI TGGCCA 2 cut(s) 3416, 4389
MslI CAYNNNNRTG 4 cut(s) 3137, 4054, 4140, 4770
Msp20I TGGCCA 2 cut(s) 3416, 4389
MspA1I CMGCKG 4 cut(s) 538, 1229, 3653, 4093
MspI CCGG 8 cut(s) 102, 554, 3848, 4753, 4810, 4849, 5215, 5388
MunI CAATTG 3 cut(s) 404, 3867, 3900
Mva1269I GAATGC 4 cut(s) 1085, 1526, 1851, 2823
MvaI CCWGG 9 cut(s) 344, 458, 932, 1339, 1748, 1925, 2304, 3819, 4064
MvnI CGCG 2 cut(s) 39, 503
NarI GGCGCC 1 cut(s) 1641
NciI CCSGG 1 cut(s) 4849
NcoI CCATGG 1 cut(s) 4765
NdeI CATATG 2 cut(s) 1104, 3595
NheI GCTAGC 1 cut(s) 2540
NmeAIII GCCGAG 1 cut(s) 5617
NmuCI GTSAC 7 cut(s) 1308, 1653, 2265, 3323, 3524, 4258, 4672
NruI TCGCGA 1 cut(s) 503
NsbI TGCGCA 2 cut(s) 1146, 1850
NsiI ATGCAT 1 cut(s) 4128
NspI RCATGY 8 cut(s) 766, 1954, 1987, 3142, 4019, 4126, 4414, 4817
PaeI GCATGC 2 cut(s) 4126, 4414
PaeR7I CTCGAG 3 cut(s) 6, 1607, 3540
PagI TCATGA 1 cut(s) 4267
PciI ACATGT 2 cut(s) 1983, 4015
PciSI GCTCTTC 2 cut(s) 552, 3693
PcsI WCGNNNNNNNCGW 1 cut(s) 3319
PctI GAATGC 4 cut(s) 1085, 1526, 1851, 2823
PdmI GAANNNNTTC 6 cut(s) 1426, 2277, 4033, 4359, 4878, 5479
PflMI CCANNNNNTGG 2 cut(s) 3412, 5469
PfoI TCCNGGA 2 cut(s) 1746, 4847
Ple19I CGATCG 1 cut(s) 1888
PleI GAGTC 5 cut(s) 442, 499, 1000, 4255, 4860
PluTI GGCGCC 1 cut(s) 1644
PpsI GAGTC 5 cut(s) 442, 499, 1000, 4255, 4860
Ppu21I YACGTR 1 cut(s) 1735
PscI ACATGT 2 cut(s) 1983, 4015
PshBI ATTAAT 1 cut(s) 2816
PsiI TTATAA 1 cut(s) 5288
Psp124BI GAGCTC 2 cut(s) 564, 3574
Psp1406I AACGTT 2 cut(s) 108, 5627
Psp6I CCWGG 9 cut(s) 342, 456, 930, 1337, 1746, 1923, 2302, 3817, 4062
PspFI CCCAGC 2 cut(s) 5103, 5564
PspGI CCWGG 9 cut(s) 342, 456, 930, 1337, 1746, 1923, 2302, 3817, 4062
PspPI GGNCC 8 cut(s) 65, 226, 1335, 1580, 2523, 3000, 4117, 4665
PspXI VCTCGAGB 2 cut(s) 6, 3540
PsrI GAACNNNNNNTAC 2 cut(s) 3734, 3766
PstI CTGCAG 3 cut(s) 163, 2040, 3111
PstNI CAGNNNCTG 3 cut(s) 689, 2147, 5344
PsuI RGATCY 5 cut(s) 181, 2185, 3007, 5231, 5416
PvuI CGATCG 1 cut(s) 1888
PvuII CAGCTG 2 cut(s) 538, 3653
RgaI GCGATCGC 1 cut(s) 1888
RruI TCGCGA 1 cut(s) 503
RseI CAYNNNNRTG 4 cut(s) 3137, 4054, 4140, 4770
SacI GAGCTC 2 cut(s) 564, 3574
SapI GCTCTTC 2 cut(s) 552, 3693
Sau96I GGNCC 8 cut(s) 65, 226, 1335, 1580, 2523, 3000, 4117, 4665
ScaI AGTACT 3 cut(s) 701, 1301, 3752
SchI GAGTC 5 cut(s) 443, 499, 1001, 4255, 4861
SduI GDGCHC 9 cut(s) 524, 564, 759, 1261, 1443, 2161, 3213, 3574, 4930
SfaAI GCGATCGC 1 cut(s) 1888
SfaNI GCATC 8 cut(s) 574, 622, 975, 1537, 1718, 1908, 2383, 5551
SfcI CTRYAG 5 cut(s) 159, 2036, 3107, 3214, 5717
SfoI GGCGCC 1 cut(s) 1642
Sfr274I CTCGAG 3 cut(s) 6, 1607, 3540
SgfI GCGATCGC 1 cut(s) 1888
SinI GGWCC 2 cut(s) 1580, 4117
SlaI CTCGAG 3 cut(s) 6, 1607, 3540
SmiMI CAYNNNNRTG 4 cut(s) 3137, 4054, 4140, 4770
SmlI CTYRAG 5 cut(s) 6, 563, 1607, 3374, 3540
SmoI CTYRAG 5 cut(s) 6, 563, 1607, 3374, 3540
SphI GCATGC 2 cut(s) 4126, 4414
SspDI GGCGCC 1 cut(s) 1640
SspI AATATT 4 cut(s) 619, 1390, 2685, 2758
SstI GAGCTC 2 cut(s) 564, 3574
StyI CCWWGG 6 cut(s) 663, 1376, 3003, 4249, 4725, 4765
TaiI ACGT 9 cut(s) 111, 1655, 1737, 3103, 3988, 4302, 4482, 5436, 5630
TaqII GACCGA 1 cut(s) 611
TatI WGTACW 7 cut(s) 699, 1299, 1782, 1980, 2641, 3750, 5683
TauI GCSGC 1 cut(s) 590
TseFI GTSAC 7 cut(s) 1308, 1653, 2265, 3323, 3524, 4258, 4672
Tsp45I GTSAC 7 cut(s) 1308, 1653, 2265, 3323, 3524, 4258, 4672
TspGWI ACGGA 5 cut(s) 102, 1672, 2984, 3149, 5528
Van91I CCANNNNNTGG 2 cut(s) 3412, 5469
VpaK11BI GGWCC 2 cut(s) 1580, 4117
VspI ATTAAT 1 cut(s) 2816
XbaI TCTAGA 3 cut(s) 194, 2182, 2615
XceI RCATGY 8 cut(s) 766, 1954, 1987, 3142, 4019, 4126, 4414, 4817
XcmI CCANNNNNNNNNTGG 4 cut(s) 454, 1269, 3974, 4169
XhoI CTCGAG 3 cut(s) 6, 1607, 3540
XmiI GTMKAC 1 cut(s) 4377
XmnI GAANNNNTTC 6 cut(s) 1426, 2277, 4033, 4359, 4878, 5479
ZrmI AGTACT 3 cut(s) 701, 1301, 3752
Zsp2I ATGCAT 1 cut(s) 4128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.