RchiOBHm_Chr5g0080681

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
86662435 .. 86686078
23644 bp
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UTR
Exon/CDS
Intron
PRQ35497

Sequence Viewer

Length: 5715 bp
ATGGCTCAAGTTGTGGATCGATGGGAGCGGTTAGTCCGCGCAGTATTGAGGAGGGAAAGGATGGGGCCTGATGCATACGAGCGGCATGGGACTGGCATTGCCGGAAATGTTCCATCTTCACTTGAAAATAATAGGGATATTGATGAAATTCTCAGAGTTGCAGATGAAATCCAAGATGAAGATCCCAATATCTCTAGAATCCTATGTGAGCATGGTTATTCGTTGGCTCAAAATCTAGACCCCAATAGTGAAGGAAGGGGAGTATTACAGTTCAAGACTGGGTTGATGTCTGTCATTAAGCAAAAGCTAGCGAAGAGGGAAGGGGCAACCATAGATAGAAGCCAGGACATTGTTCGCTTACAAGAGTTCTATAAACAGTATAGACAGAAAAATAATGTTGAACAATTGCGTGAGGAAGAAATGAAGTTGAGGGAGTCTGGGGTTTTCAGTGGAAACCTGGGCGAACTGGAAAGGAAAACAGTGAAGAGGAAAAGAGTATTCGCGACTCTAAGAGTTCTGGGCAAAGTTTTGGAGCAGCTGACAGAGGACATTCCAGAAGAGCTCAAGCACCAAATGGAGATAGATGCTGCAATGACTGAAGACCTGATTGCGTACAATATTATTCCACTGGATGCTCCTAGCATTACAAATGTTATCACGTCCTTGGCTGAGGTTCAAGCAGCAGTTTCTGGGTTAAAGTACTTCAGGGGCCTACCAAAGTTACCGACAGATTTTCCGATTCCTGCTACACGAGAGCCTGACATGCTTGATTTCCTGCATTATGTATTTGGATTTCAGAAAGACAATGTTTGTAACCAGCGCGAACATATTGTGCATCTCCTTGCAAATGAGCAATCACGGCTTCGTATTCCTGAAGAAACTGAACCTATATTGGATGAGGCTGCGGTGCAAAATATATTTTTAAAGTCCCTAGACAACTATATTAAGTGGTGTGACTACTTGTGCATTCAGCCAGTTTGGAGCAATTTGCAGTCAGTTAGCAAGGAGAAAAAGCTACTGTTTGTTTCCATGTACTGTTTGATCTGGGGTGAAGCAGCCAATGTTAGATTTCTTCCAGAATGCTTGTGCTACATATTTCATCATATGGCAAGGGAAATGGATGAAATTCTGAGACAGCAGACTGCACAGCCAGCCAACAGTTGTAATTCTGAAAATGGAGTTTCTTTCCTTGATCACGTTATATATCCTCTGTTTGAGATTGTGTCTGCGGAAGCTGGAAACAATGAAAATGGACGAGCACCACATTCTGCTTGGCGCAATTATGATGATTTTAATGAGTACTTCTGGTCACTCCATTGTTTTGAACTTAGTTGGCCCTGGCGCAAAGGTTCATCATTTTTTCAAAAGCCAACGCCAAGGTCAAAGAATATTCTCAAATCTGGCAGAAGTCAACATCGTGGAAAAACTTCATTTGTTGAGCATAGGACATTTCTCCATCTGTATCATAGTTTCCACCGTCTGTGGATATTCCTTGTGATGATGTTTCAGGGACTTGCGATCATTGCATTCAATGGAAGTTTTGATGCAAAATGTATTAGAGAAATTCTCAGTCTCGGTCCGACATTTGTTGGAATGAAATTTCTCGAGAGTGTTCTTGATGTTCTTATGATGTATGGCGCCTATTCTACAACACGGCGCCTAGCAGTTTCTCGAATTTTTCTCCGATTTGTTTGGTTTGGCACTGCATCAGTGGTCATATCTTTTCTTTATGTGAAAGCTCTCCAGGAAGAGAGTAAACAAAATGGAAACCATATTATCTACAAGTTGTATCTGCTCATTGTAGGCATATATGCTGGTATCCAGTTCTTCATTAGTTTTTTCATGCGCATACCAGCCTGCCACAATCTGACTAATCAATGTGATCGCTGGCCTCTGATTCGCTTTGTCAAGTGGATGCGCCAGGAACGGTACTATGTTGGACGGGGCATGTATGAGAGGACTACTGATTTCATCAAGTACATGTTTTTCTGGCTTGTGATTTTGAGTGGAAAGTTTTCATTTGCATACTTTCTCCAGATCAAGCCGTTGGTGGAACCAACCAGAATTATAGTGAACACAAATGCTATAACGTATACTTGGCATGATTTTATTTCTAAAAACAACTATAATGCTCTGACAGTTGCTGCTTTGTGGGCTCCCGTGATAGTTATTTATCTTTTAGATCTCTATATATTTTACACCGTTATATCTGCTGTGTGGGGATTCTTGCTTGGTGCCAGAGATCGTCTTGGAGAGATTAGATCATTGGAAGCACTTCATAAACTATTTGAGCAGTTTCCGGGTGCTTTTATGGACACTCTTCATATCCGCCTGCCTAACAGGGCTTACCATCAGTCTTCCAGTGAGGATATTGAGAAGAACAAGGTTGATGCTAGTCGATTTTCTCCCTTTTGGAATGAAATCATAAAAAATTTGAGGGAAGAAGATTATATCACTGACCTAGAAATGGAGCTGCTTGTAATGCCTAAAAATTCTGGAAGTCTTCCCTTAGTTCAGTGGCCCCTTTTCCTTCTTGCTAGCAAGATATTTGTTGCCAAAGATATTGCTCTTGAAAGCAGGGATTCACAAGATGAGCTTTGGGAAAGAATTTCTAGAGATGACTATATGAAGTATGCTGTCCAGGAGTGCTTCCATACCATTAAGCTTATCCTAAGTGAAATATTGGAGGGTGAAGGAAAGCTGTGGGTTGAAAGGATATATGATGATATTCAAGTAAGCATAGTGAAGAAGAGTATTCAGGCTGACTTTCAACTGAACAAGCTGCCACTCGTGATTTCAAGAGTTACTGCATTAATGGGAATTCTGAAAAAAGAGGAAACATCTGCACTGGTGGATGGTGCTATTAAGGCTGTTCAAGATCTCTACGACATTGTGCGCCATGATGTCCTTTCTATTAACATGAGGGAAAACTATGAAACATGGAATTTGTTGTCAAAAGCACGGACGGATGGTCGGTTGTTTGCCAAGTTGAAGTGGCCCAAGGATCCTTCATTGAGAGCACAAGTCAAAAGATTGTATTCATTGTTGACAATTCAAGATTCAGCTGCCAATGTCCCCCAAAATCTGGAGGCCGGTCGTAGGCTGGAGTTCTTTACAAATTCTCTTTTCATGGAGATGCCCGAAGCAAGGCCAGTCCGTGAAATGTTGTCGTTCAGTGTTTTTACTCCATATTATGCTGAGACTGTGCTCTATAGTATCGCTGAACTCCAGAAGAAAAATGAAGATGGGATATCAATATTGTTTTACCTTCAAAAGATTTACCCAGATGAGTGGAAGAACTTTCTTTTACGGATTGGCCGTGACGAAAATGCACATGACTCGGAACTTTATGATAATCCCTCTGATATTCTTGAGCTTCGGTTTTGGGCGTCTTACCGAGGCCAAACATTGGCCAGAACTGTTCGTGGGATGATGTATTATAGGAAGGCTCTTATGCTTCAGACCTATTTGGAGAGATTGAATTCTGGAGTATCAGATGTGGAGGCTGCAATTTCTAGTGGTGATGCGGCTGAAACTCGAGCATTTGAGTTATCTCCTGAAGCACGAGCTCAGGCAGACCTGAAGTTTACATATGTAGTTACTTGTCAAATATATGGAAAACAGAAAGAAGGCCAAAAACCTGAGGCTGCTGATATAGCATTGCTTATGCAAAGAAATGAGGCTCTTCGAGTTGCTTTTATCGATGAGGTTGAGACTTTGAAGGATGGTAAAGTGAACAAAGAGTTCTATTCAAAACTTGTAAAGGCAGATATCAATGGGAAGGACAAGGAAATCTACTCTATAAAACTGCCTGGAAATCCAAAAATAGGTGAAGGGAAACCGGAGAACCAAAATCATGCAATTGTATTTACTCGTGGAAATGCAATTCAGACAATTGACATGAATCAGGATAATTATTTTGAGGAAGCTTTGAAGATGAGAAATTTACTCGAAGAATTCCACCGTGATCATGGTATCCGTCGTCCTACAATTCTTGGTGTCAGGGAACATGTCTTTACGGGGAGTGTTTCTTCTTTAGCTTCATTCATGTCCCATCAGGAAACAAGCTTTGTAACTCTAGCTCAGCGGGTTCTTGCCAATCCTTTGAAGGTCCGTATGCATTATGGTCATCCTGATGTGTTTGATAGAGTTTTCCACATAACACGGGGTGGTATTAGCAAGGCTTCTCGAGTGATTAACATCAGTGAAGACATCTTTGCAGGCTTCAACTCAACTTTACGCCAAGGAAATGTGACTCACCATGAGTATATTCAGGTTGGCAAAGGGCGGGACGTTGGGCTCAACCAAATTGCAGTATTTGAGGGGAAGGTTTCTGGTGGTAATGGTGAACAGGTTCTGAGTCGTGATGTATACAGGCTTGGGCAGCAGTTTGATTTCTTCCGCATGCTGTCATTTTACTTTACCACTGTCGGCTACTACTTCTGTACACTGTTAACAGTGCTGACGGTTTACATTTTTCTCTATGGGAAAACATATATGGCGCTATCTGGGGTTGGTGAATCCTTGCAAAACATAGCTGAGGTAACCAAGAATACTGCACTGACTGCTGCTCTAAATACACAATTCCTCCTTCAAATTGGTATCTTTACTGCTGTCCCGATGATTTTAGGCTCCATCTTGGAACAGGGTTTCCTGCGGGCCATAGTAAGTTTCCTCACAATGCAGTTGCAACTTTGTTCTGTCTTCTTCACATTCTCCTTGGGAACCAAAACACATTATTTTGGCCGGACAATTCTCCATGGTGGTGCAAAGTATCAAGCAACCGGCAGGGGATTTGTAGTCCGGCATATTAAGTTTACAGAGAATTACAGGCTTTACTCCCGCAGTCATTTTATCAAAGGGTTGGAAGTAGTTCTTTTGTTGGTAGTGTACCTTGCTTATGGATATGATGATGGCGGTGCTATATCATACATTCTTCTTTCAATGACCAGTTGGTTCATGGCTCTTTCTTGGCTTTTTGCTCCCTATTTGTTCAACCCATCTGGGTTTGAGTGGCAGAAGGTTGTGGAGGATTTCCGAGATTGGACAAACTGGCTTCTTTATAGAGGTGGAATTGGAGTTAAGGGTGAAGAAAGCTGGGAAGCTTGGTGGGAGGAAGAACTGGCGCATATTAGAACCTTCGGAGGAAGGATTGCAGAGACAATTTTGAGTCTAAGATTCTTTATCTTCCAGTATGGAATTATCTACCGGCTAGATGTGAAGGGATCAAATACATCACTAACGGTGTATGGCCTCTCATGGATCGTGCTGGTGGTGCTTATAATTCTTTTCAAGGTTTTCACCTTCAGCCAGAAGATATCTGTCAACTTCCAGCTTCTGTTGCGCTTCATTCAAGGGGTCGCCTTCATGTTGGCACTGGCTGGTTTAGCAGTAGCAGTCAAATTTACAGATCTGACAATTGCAGACGTTTTTGCTTCCATTTTAGCGTTTGTACCCACTGGGTGGGGAATTCTTTCCATTTGCATAGCTTGGAAACCCTTGATGAAGAAACTGGGCTTGTGGAAATCCATCCGTTCCATTGCCCTTCTTTATGATGCTGGGATGGGTATGGTTATATTCATTCCCATTGCATTGTCATCATGGTTCCCATTCGTATCAACGTTCCAAACTCGGCTCATGTTCAACCAGGCTTTCAGTCGAGGGTTGGAAATCTCTGTGCTACTTGCTGGAAACAACCCCAATTCTGGATTATAG

Protein Analysis

1904

Amino Acids

218.99

Weight (kDa)

8.13

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 338 - 445 2.4e-40 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 841 - 1018 7.7e-48 Callose synthase 1 domain
Glucan_synthase PF02364 1025 - 1715 3.8e-232 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011696)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 5282
Acc16I TGCGCA 1 cut(s) 1847
AccB1I GGYRCC 3 cut(s) 1637, 1656, 2234
AccB7I CCANNNNNTGG 3 cut(s) 3085, 3409, 5463
AccBSI CCGCTC 2 cut(s) 28, 82
AccI GTMKAC 2 cut(s) 2093, 4371
AccII CGCG 3 cut(s) 39, 503, 822
AclI AACGTT 1 cut(s) 5621
AclWI GGATC 6 cut(s) 24, 176, 2999, 3012, 5233, 5270
AcoI YGGCCR 3 cut(s) 3316, 3411, 4744
AcuI CTGAAG 7 cut(s) 618, 688, 894, 3443, 3579, 3602, 5290
AcyI GRCGYC 3 cut(s) 1638, 1657, 3389
AdeI CACNNNGTG 2 cut(s) 4169, 5463
AfaI GTAC 9 cut(s) 614, 701, 1034, 1301, 1931, 1979, 4447, 4892, 5454
AfiI CCNNNNNNNGG 8 cut(s) 2467, 3085, 3099, 3147, 3409, 3827, 5463, 5705
AflIII ACRYGT 2 cut(s) 1980, 4009
AhdI GACNNNNNGTC 1 cut(s) 2970
AjiI CACGTC 1 cut(s) 660
AjnI CCWGG 8 cut(s) 342, 456, 1337, 1743, 1920, 2640, 3811, 5646
AloI GAACNNNNNNTCC 2 cut(s) 4635, 4667
Alw21I GWGCWC 5 cut(s) 564, 1261, 3022, 3210, 3571
Alw26I GTCTC 5 cut(s) 1126, 1577, 3194, 3707, 5153
AlwI GGATC 6 cut(s) 24, 176, 2999, 3012, 5233, 5270
AlwNI CAGNNNCTG 4 cut(s) 689, 2144, 4357, 5338
Ama87I CYCGRG 3 cut(s) 1604, 3537, 4188
AseI ATTAAT 1 cut(s) 2813
Asp700I GAANNNNTTC 6 cut(s) 1426, 2014, 2274, 4353, 4872, 5473
AspS9I GGNCC 8 cut(s) 65, 709, 1335, 1577, 2520, 2997, 4111, 4659
AsuC2I CCSGG 1 cut(s) 2301
AsuHPI GGTGA 9 cut(s) 1061, 2702, 3533, 3842, 4250, 4358, 4529, 5099, 5293
AsuNHI GCTAGC 2 cut(s) 307, 2537
AvaI CYCGRG 3 cut(s) 1604, 3537, 4188
AvaII GGWCC 2 cut(s) 1577, 4111
AxyI CCTNAGG 1 cut(s) 3642
BalI TGGCCA 1 cut(s) 3413
BamHI GGATCC 1 cut(s) 3004
BanI GGYRCC 3 cut(s) 1637, 1656, 2234
BanII GRGCYC 4 cut(s) 564, 2158, 3571, 4302
BauI CACGAG 4 cut(s) 750, 2789, 3564, 3873
BbsI GAAGAC 5 cut(s) 606, 2349, 2495, 4215, 4696
Bbv12I GWGCWC 5 cut(s) 564, 1261, 3022, 3210, 3571
BbvCI CCTCAGC 2 cut(s) 669, 4539
BceAI ACGGC 4 cut(s) 875, 1670, 2029, 3303
BcgI CGANNNNNNTGC 2 cut(s) 3321, 3355
BciT130I CCWGG 8 cut(s) 344, 458, 1339, 1745, 1922, 2642, 3813, 5648
BciVI GTATCC 2 cut(s) 1829, 3986
BclI TGATCA 2 cut(s) 1192, 3967
BcnI CCSGG 1 cut(s) 2301
BcoDI GTCTC 5 cut(s) 1126, 1577, 3194, 3707, 5153
BfmI CTRYAG 1 cut(s) 3211
BfoI RGCGCY 3 cut(s) 1641, 1660, 4505
BfuI GTATCC 2 cut(s) 1829, 3986
BglII AGATCT 3 cut(s) 2182, 2878, 5410
BlpI GCTNAGC 1 cut(s) 4083
BmcAI AGTACT 2 cut(s) 701, 1301
Bme1390I CCNGG 9 cut(s) 344, 458, 1339, 1745, 1922, 2301, 2642, 3813, 5648
Bme18I GGWCC 2 cut(s) 1577, 4111
BmeRI GACNNNNNGTC 1 cut(s) 2970
BmeT110I CYCGRG 3 cut(s) 1604, 3537, 4188
BmgBI CACGTC 1 cut(s) 660
BmgT120I GGNCC 8 cut(s) 65, 709, 1335, 1577, 2520, 2997, 4111, 4659
BmrFI CCNGG 9 cut(s) 344, 458, 1339, 1745, 1922, 2301, 2642, 3813, 5648
BmrI ACTGGG 3 cut(s) 288, 5469, 5522
BmtI GCTAGC 2 cut(s) 311, 2541
BmuI ACTGGG 3 cut(s) 288, 5469, 5522
BpiI GAAGAC 5 cut(s) 606, 2349, 2495, 4215, 4696
BplI GAGNNNNNCTC 2 cut(s) 1551, 1583
BpmI CTGGAG 6 cut(s) 1727, 2018, 3107, 3125, 3212, 3507
Bpu10I CCTNAGC 3 cut(s) 669, 3570, 4539
Bpu1102I GCTNAGC 1 cut(s) 4083
BpuEI CTTGAG 2 cut(s) 548, 3392
BpuMI CCSGG 1 cut(s) 2301
Bsa29I ATCGAT 2 cut(s) 19, 3702
BsaBI GATNNNNATC 2 cut(s) 180, 4199
BsaHI GRCGYC 3 cut(s) 1638, 1657, 3389
BsaJI CCNNGG 9 cut(s) 457, 663, 1337, 1376, 3000, 3397, 4243, 4719, 4759
BsaWI WCCGGW 1 cut(s) 3841
BsaXI ACNNNNNCTCC 2 cut(s) 4572, 4602
Bsc4I CCNNNNNNNGG 8 cut(s) 2467, 3085, 3099, 3147, 3409, 3827, 5463, 5705
Bse118I RCCGGY 3 cut(s) 3092, 4784, 5208
Bse21I CCTNAGG 1 cut(s) 3642
Bse3DI GCAATG 6 cut(s) 96, 597, 1521, 3659, 5538, 5586
Bse8I GATNNNNATC 2 cut(s) 180, 4199
BseBI CCWGG 8 cut(s) 344, 458, 1339, 1745, 1922, 2642, 3813, 5648
BseCI ATCGAT 2 cut(s) 19, 3702
BseDI CCNNGG 9 cut(s) 457, 663, 1337, 1376, 3000, 3397, 4243, 4719, 4759
BseJI GATNNNNATC 2 cut(s) 180, 4199
BseLI CCNNNNNNNGG 8 cut(s) 2467, 3085, 3099, 3147, 3409, 3827, 5463, 5705
BseMI GCAATG 6 cut(s) 96, 597, 1521, 3659, 5538, 5586
BseRI GAGGAG 1 cut(s) 64
BseYI CCCAGC 2 cut(s) 5097, 5558
BsgI GTGCAG 3 cut(s) 1128, 2829, 4542
Bsh1236I CGCG 3 cut(s) 39, 503, 822
Bsh1285I CGRYCG 1 cut(s) 3097
BshNI GGYRCC 3 cut(s) 1637, 1656, 2234
BshVI ATCGAT 2 cut(s) 19, 3702
BsiEI CGRYCG 1 cut(s) 3097
BsiHKAI GWGCWC 5 cut(s) 564, 1261, 3022, 3210, 3571
BsiHKCI CYCGRG 3 cut(s) 1604, 3537, 4188
BsiSI CCGG 8 cut(s) 102, 2300, 3093, 3842, 4747, 4785, 4804, 5209
BslFI GGGAC 7 cut(s) 103, 913, 1524, 3059, 4036, 4304, 4601
BslI CCNNNNNNNGG 8 cut(s) 2467, 3085, 3099, 3147, 3409, 3827, 5463, 5705
BsmAI GTCTC 5 cut(s) 1126, 1577, 3194, 3707, 5153
BsmFI GGGAC 7 cut(s) 103, 913, 1524, 3059, 4036, 4304, 4601
BsmI GAATGC 3 cut(s) 966, 1085, 1526
BsoBI CYCGRG 3 cut(s) 1604, 3537, 4188
Bsp1286I GDGCHC 7 cut(s) 564, 1261, 2158, 3022, 3210, 3571, 4302
Bsp1407I TGTACA 1 cut(s) 4445
Bsp1720I GCTNAGC 1 cut(s) 4083
Bsp19I CCATGG 1 cut(s) 4759
Bsp68I TCGCGA 1 cut(s) 503
BspDI ATCGAT 2 cut(s) 19, 3702
BspFNI CGCG 3 cut(s) 39, 503, 822
BspOI GCTAGC 2 cut(s) 311, 2541
BspPI GGATC 6 cut(s) 24, 176, 2999, 3012, 5233, 5270
BspQI GCTCTTC 2 cut(s) 552, 3690
BspT107I GGYRCC 3 cut(s) 1637, 1656, 2234
BsrBI CCGCTC 2 cut(s) 28, 82
BsrDI GCAATG 6 cut(s) 96, 597, 1521, 3659, 5538, 5586
BsrFI RCCGGY 3 cut(s) 3092, 4784, 5208
BsrGI TGTACA 1 cut(s) 4445
BssAI RCCGGY 3 cut(s) 3092, 4784, 5208
BssECI CCNNGG 9 cut(s) 457, 663, 1337, 1376, 3000, 3397, 4243, 4719, 4759
BssNAI GTATAC 2 cut(s) 2094, 4372
BssNI GRCGYC 3 cut(s) 1638, 1657, 3389
BssSI CACGAG 4 cut(s) 750, 2789, 3564, 3873
BssT1I CCWWGG 6 cut(s) 663, 1376, 3000, 4243, 4719, 4759
Bst1107I GTATAC 2 cut(s) 2094, 4372
Bst2BI CACGAG 4 cut(s) 750, 2789, 3564, 3873
Bst2UI CCWGG 8 cut(s) 344, 458, 1339, 1745, 1922, 2642, 3813, 5648
Bst6I CTCTTC 7 cut(s) 308, 479, 552, 1743, 2325, 2744, 3690
BstACI GRCGYC 3 cut(s) 1638, 1657, 3389
BstAPI GCANNNNNTGC 1 cut(s) 4565
BstAUI TGTACA 1 cut(s) 4445
BstC8I GCNNGC 9 cut(s) 309, 1152, 1858, 1889, 2333, 2539, 4222, 4406, 4659
BstDSI CCRYGG 1 cut(s) 4759
BstEII GGTNACC 1 cut(s) 4543
BstFNI CGCG 3 cut(s) 39, 503, 822
BstH2I RGCGCY 3 cut(s) 1641, 1660, 4505
BstMAI GTCTC 5 cut(s) 1126, 1577, 3194, 3707, 5153
BstMCI CGRYCG 1 cut(s) 3097
BstNI CCWGG 8 cut(s) 344, 458, 1339, 1745, 1922, 2642, 3813, 5648
BstNSI RCATGY 5 cut(s) 766, 1951, 1984, 4013, 4408
BstPI GGTNACC 1 cut(s) 4543
BstSCI CCNGG 9 cut(s) 342, 456, 1337, 1743, 1920, 2299, 2640, 3811, 5646
BstSFI CTRYAG 1 cut(s) 3211
BstUI CGCG 3 cut(s) 39, 503, 822
BstV2I GAAGAC 5 cut(s) 606, 2349, 2495, 4215, 4696
BstX2I RGATCY 5 cut(s) 181, 2182, 2878, 3004, 5410
BstXI CCANNNNNNTGG 1 cut(s) 3291
BstYI RGATCY 5 cut(s) 181, 2182, 2878, 3004, 5410
BstZ17I GTATAC 2 cut(s) 2094, 4372
Bsu15I ATCGAT 2 cut(s) 19, 3702
Bsu36I CCTNAGG 1 cut(s) 3642
BsuI GTATCC 2 cut(s) 1829, 3986
BsuTUI ATCGAT 2 cut(s) 19, 3702
BtgI CCRYGG 1 cut(s) 4759
BtrI CACGTC 1 cut(s) 660
BtsI GCAGTG 1 cut(s) 1701
BtuMI TCGCGA 1 cut(s) 503
Cac8I GCNNGC 9 cut(s) 309, 1152, 1858, 1889, 2333, 2539, 4222, 4406, 4659
CaiI CAGNNNCTG 4 cut(s) 689, 2144, 4357, 5338
Cfr10I RCCGGY 3 cut(s) 3092, 4784, 5208
Cfr13I GGNCC 8 cut(s) 65, 709, 1335, 1577, 2520, 2997, 4111, 4659
ClaI ATCGAT 2 cut(s) 19, 3702
CpoI CGGWCCG 1 cut(s) 1577
CseI GACGC 1 cut(s) 3378
Csp6I GTAC 9 cut(s) 613, 700, 1033, 1300, 1930, 1978, 4446, 4891, 5453
CspI CGGWCCG 1 cut(s) 1577
CviQI GTAC 9 cut(s) 613, 700, 1033, 1300, 1930, 1978, 4446, 4891, 5453
DinI GGCGCC 2 cut(s) 1639, 1658
DraI TTTAAA 1 cut(s) 924
DraIII CACNNNGTG 2 cut(s) 4169, 5463
DriI GACNNNNNGTC 1 cut(s) 2970
EaeI YGGCCR 3 cut(s) 3316, 3411, 4744
Eam1104I CTCTTC 7 cut(s) 308, 479, 552, 1743, 2325, 2744, 3690
Eam1105I GACNNNNNGTC 1 cut(s) 2970
EarI CTCTTC 7 cut(s) 308, 479, 552, 1743, 2325, 2744, 3690
EciI GGCGGA 1 cut(s) 2318
Ecl136II GAGCTC 2 cut(s) 562, 3569
Eco130I CCWWGG 6 cut(s) 663, 1376, 3000, 4243, 4719, 4759
Eco24I GRGCYC 4 cut(s) 564, 2158, 3571, 4302
Eco32I GATATC 3 cut(s) 3252, 3772, 5319
Eco47I GGWCC 2 cut(s) 1577, 4111
Eco53kI GAGCTC 2 cut(s) 562, 3569
Eco57I CTGAAG 7 cut(s) 618, 688, 894, 3443, 3579, 3602, 5290
Eco81I CCTNAGG 1 cut(s) 3642
Eco88I CYCGRG 3 cut(s) 1604, 3537, 4188
Eco91I GGTNACC 1 cut(s) 4543
EcoICRI GAGCTC 2 cut(s) 562, 3569
EcoO109I RGGNCCY 2 cut(s) 65, 709
EcoO65I GGTNACC 1 cut(s) 4543
EcoRI GAATTC 4 cut(s) 2820, 3481, 3956, 5469
EcoRII CCWGG 8 cut(s) 342, 456, 1337, 1743, 1920, 2640, 3811, 5646
EcoRV GATATC 3 cut(s) 3252, 3772, 5319
EcoT14I CCWWGG 6 cut(s) 663, 1376, 3000, 4243, 4719, 4759
EcoT22I ATGCAT 2 cut(s) 76, 4122
EcoT38I GRGCYC 4 cut(s) 564, 2158, 3571, 4302
EgeI GGCGCC 2 cut(s) 1639, 1658
EheI GGCGCC 2 cut(s) 1639, 1658
ErhI CCWWGG 6 cut(s) 663, 1376, 3000, 4243, 4719, 4759
FalI AAGNNNNNCTT 4 cut(s) 2580, 2612, 4860, 4892
FaqI GGGAC 7 cut(s) 103, 913, 1524, 3059, 4036, 4304, 4601
FauI CCCGC 4 cut(s) 4080, 4281, 4650, 4850
FauNDI CATATG 2 cut(s) 1104, 3592
FbaI TGATCA 2 cut(s) 1192, 3967
FblI GTMKAC 2 cut(s) 2093, 4371
FriOI GRGCYC 4 cut(s) 564, 2158, 3571, 4302
FspAI RTGCGCAY 1 cut(s) 1847
FspI TGCGCA 1 cut(s) 1847
GsaI CCCAGC 2 cut(s) 5101, 5562
GsuI CTGGAG 6 cut(s) 1727, 2018, 3107, 3125, 3212, 3507
HaeII RGCGCY 3 cut(s) 1641, 1660, 4505
HapII CCGG 8 cut(s) 102, 2300, 3093, 3842, 4747, 4785, 4804, 5209
HgaI GACGC 1 cut(s) 3378
Hin1I GRCGYC 3 cut(s) 1638, 1657, 3389
HincII GTYRAC 4 cut(s) 1412, 3048, 4455, 5326
HindII GTYRAC 4 cut(s) 1412, 3048, 4455, 5326
HindIII AAGCTT 4 cut(s) 2663, 3927, 4066, 5103
HpaI GTTAAC 1 cut(s) 4455
HpaII CCGG 8 cut(s) 102, 2300, 3093, 3842, 4747, 4785, 4804, 5209
HphI GGTGA 9 cut(s) 1061, 2702, 3533, 3842, 4250, 4358, 4529, 5099, 5293
Hpy99I CGWCG 1 cut(s) 3984
HpyCH4IV ACGT 6 cut(s) 659, 1197, 2090, 4293, 5427, 5621
HpySE526I ACGT 6 cut(s) 659, 1197, 2090, 4293, 5427, 5621
Hsp92I GRCGYC 3 cut(s) 1638, 1657, 3389
KasI GGCGCC 2 cut(s) 1637, 1656
Ksp22I TGATCA 2 cut(s) 1192, 3967
KspAI GTTAAC 1 cut(s) 4455
LguI GCTCTTC 2 cut(s) 552, 3690
LmnI GCTCC 8 cut(s) 25, 532, 640, 981, 2161, 2470, 4637, 4987
MaeII ACGT 6 cut(s) 659, 1197, 2090, 4293, 5427, 5621
MbiI CCGCTC 2 cut(s) 28, 82
MfeI CAATTG 4 cut(s) 404, 3861, 3894, 5418
MflI RGATCY 5 cut(s) 181, 2182, 2878, 3004, 5410
MhlI GDGCHC 7 cut(s) 564, 1261, 2158, 3022, 3210, 3571, 4302
MlsI TGGCCA 1 cut(s) 3413
MluNI TGGCCA 1 cut(s) 3413
Mly113I GGCGCC 2 cut(s) 1638, 1657
MlyI GAGTC 6 cut(s) 443, 499, 3332, 4249, 4369, 5179
MmeI TCCRAC 5 cut(s) 1570, 1604, 1918, 4845, 5646
Mox20I TGGCCA 1 cut(s) 3413
Mph1103I ATGCAT 2 cut(s) 76, 4122
MroXI GAANNNNTTC 6 cut(s) 1426, 2014, 2274, 4353, 4872, 5473
MscI TGGCCA 1 cut(s) 3413
MslI CAYNNNNRTG 3 cut(s) 3134, 4134, 4764
Msp20I TGGCCA 1 cut(s) 3413
MspA1I CMGCKG 3 cut(s) 538, 3065, 4087
MspI CCGG 8 cut(s) 102, 2300, 3093, 3842, 4747, 4785, 4804, 5209
MspR9I CCNGG 9 cut(s) 344, 458, 1339, 1745, 1922, 2301, 2642, 3813, 5648
MunI CAATTG 4 cut(s) 404, 3861, 3894, 5418
Mva1269I GAATGC 3 cut(s) 966, 1085, 1526
MvaI CCWGG 8 cut(s) 344, 458, 1339, 1745, 1922, 2642, 3813, 5648
MvnI CGCG 3 cut(s) 39, 503, 822
NarI GGCGCC 2 cut(s) 1638, 1657
NciI CCSGG 1 cut(s) 2301
NcoI CCATGG 1 cut(s) 4759
NdeI CATATG 2 cut(s) 1104, 3592
NheI GCTAGC 2 cut(s) 307, 2537
NmeAIII GCCGAG 1 cut(s) 5611
NmuCI GTSAC 4 cut(s) 953, 1308, 3320, 4252
NruI TCGCGA 1 cut(s) 503
NsbI TGCGCA 1 cut(s) 1847
NsiI ATGCAT 2 cut(s) 76, 4122
NspI RCATGY 5 cut(s) 766, 1951, 1984, 4013, 4408
PaeI GCATGC 1 cut(s) 4408
PaeR7I CTCGAG 3 cut(s) 1604, 3537, 4188
PciI ACATGT 2 cut(s) 1980, 4009
PciSI GCTCTTC 2 cut(s) 552, 3690
PcsI WCGNNNNNNNCGW 1 cut(s) 3316
PctI GAATGC 3 cut(s) 966, 1085, 1526
PdmI GAANNNNTTC 6 cut(s) 1426, 2014, 2274, 4353, 4872, 5473
PfeI GAWTC 9 cut(s) 198, 739, 1897, 2223, 2582, 3059, 3904, 4520, 5178
PflMI CCANNNNNTGG 3 cut(s) 3085, 3409, 5463
PfoI TCCNGGA 2 cut(s) 1743, 2640
PleI GAGTC 6 cut(s) 442, 499, 3332, 4249, 4368, 5178
PluTI GGCGCC 2 cut(s) 1641, 1660
PpsI GAGTC 6 cut(s) 442, 499, 3332, 4249, 4368, 5178
PscI ACATGT 2 cut(s) 1980, 4009
PshBI ATTAAT 1 cut(s) 2813
PsiI TTATAA 1 cut(s) 5282
Psp124BI GAGCTC 2 cut(s) 564, 3571
Psp1406I AACGTT 1 cut(s) 5621
Psp6I CCWGG 8 cut(s) 342, 456, 1337, 1743, 1920, 2640, 3811, 5646
PspEI GGTNACC 1 cut(s) 4543
PspFI CCCAGC 2 cut(s) 5097, 5558
PspGI CCWGG 8 cut(s) 342, 456, 1337, 1743, 1920, 2640, 3811, 5646
PspPI GGNCC 8 cut(s) 65, 709, 1335, 1577, 2520, 2997, 4111, 4659
PspXI VCTCGAGB 1 cut(s) 3537
PstNI CAGNNNCTG 4 cut(s) 689, 2144, 4357, 5338
PsuI RGATCY 5 cut(s) 181, 2182, 2878, 3004, 5410
PvuII CAGCTG 2 cut(s) 538, 3065
RruI TCGCGA 1 cut(s) 503
RsaI GTAC 9 cut(s) 614, 701, 1034, 1301, 1931, 1979, 4447, 4892, 5454
RsaNI GTAC 9 cut(s) 613, 700, 1033, 1300, 1930, 1978, 4446, 4891, 5453
RseI CAYNNNNRTG 3 cut(s) 3134, 4134, 4764
Rsr2I CGGWCCG 1 cut(s) 1577
RsrII CGGWCCG 1 cut(s) 1577
SacI GAGCTC 2 cut(s) 564, 3571
SapI GCTCTTC 2 cut(s) 552, 3690
Sau96I GGNCC 8 cut(s) 65, 709, 1335, 1577, 2520, 2997, 4111, 4659
ScaI AGTACT 2 cut(s) 701, 1301
SchI GAGTC 6 cut(s) 443, 499, 3332, 4249, 4369, 5179
ScrFI CCNGG 9 cut(s) 344, 458, 1339, 1745, 1922, 2301, 2642, 3813, 5648
SduI GDGCHC 7 cut(s) 564, 1261, 2158, 3022, 3210, 3571, 4302
SfcI CTRYAG 1 cut(s) 3211
SfoI GGCGCC 2 cut(s) 1639, 1658
Sfr274I CTCGAG 3 cut(s) 1604, 3537, 4188
SinI GGWCC 2 cut(s) 1577, 4111
SlaI CTCGAG 3 cut(s) 1604, 3537, 4188
SmiMI CAYNNNNRTG 3 cut(s) 3134, 4134, 4764
SmlI CTYRAG 6 cut(s) 6, 563, 1604, 3371, 3537, 4188
SmoI CTYRAG 6 cut(s) 6, 563, 1604, 3371, 3537, 4188
SphI GCATGC 1 cut(s) 4408
SspDI GGCGCC 2 cut(s) 1637, 1656
SspI AATATT 4 cut(s) 619, 1390, 2682, 3258
SstI GAGCTC 2 cut(s) 564, 3571
StyD4I CCNGG 9 cut(s) 342, 456, 1337, 1743, 1920, 2299, 2640, 3811, 5646
StyI CCWWGG 6 cut(s) 663, 1376, 3000, 4243, 4719, 4759
TaiI ACGT 6 cut(s) 662, 1200, 2093, 4296, 5430, 5624
TaqII GACCGA 1 cut(s) 1565
TatI WGTACW 5 cut(s) 699, 1032, 1299, 1977, 4445
TauI GCSGC 2 cut(s) 85, 3530
TfiI GAWTC 9 cut(s) 198, 739, 1897, 2223, 2582, 3059, 3904, 4520, 5178
TseFI GTSAC 4 cut(s) 953, 1308, 3320, 4252
Tsp45I GTSAC 4 cut(s) 953, 1308, 3320, 4252
TspGWI ACGGA 7 cut(s) 2977, 2981, 3146, 3325, 3968, 4103, 5522
Van91I CCANNNNNTGG 3 cut(s) 3085, 3409, 5463
VpaK11BI GGWCC 2 cut(s) 1577, 4111
VspI ATTAAT 1 cut(s) 2813
XbaI TCTAGA 3 cut(s) 194, 235, 2612
XceI RCATGY 5 cut(s) 766, 1951, 1984, 4013, 4408
XcmI CCANNNNNNNNNTGG 3 cut(s) 1269, 3968, 4957
XhoI CTCGAG 3 cut(s) 1604, 3537, 4188
XmiI GTMKAC 2 cut(s) 2093, 4371
XmnI GAANNNNTTC 6 cut(s) 1426, 2014, 2274, 4353, 4872, 5473
ZrmI AGTACT 2 cut(s) 701, 1301
Zsp2I ATGCAT 2 cut(s) 76, 4122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.