FvH4_3g45131

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
37526352 .. 37526573
222 bp
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UTR
Exon/CDS
Intron
FvH4_3g45131.t1

Sequence Viewer

Length: 222 bp
ATGGTTCAAGTGGTAGTGGTGGTTCGAGTGACAACAACAAATGGTAGTGATGATTCAAGAGAAGAAAGAAGCAGAAGGAGGCCTCCATACTTGGAAGACTACACATCAGGAGAAGGCTTGAGTGGGGAAGAAGGTGAAGAAGCTCATAGTTTTGTTGTACTTTCTTCTAATGAGGATCCAGTGAGCTTTGAGGAAGCGGTTGCGGATTTGGTTAAGTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

74

Amino Acids

8.11

Weight (kDa)

4.34

Isoelectric Point (pI)

59.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 197, 203
AclWI GGATC 2 cut(s) 170, 183
AfaI GTAC 1 cut(s) 159
AgsI TTSAA 2 cut(s) 8, 57
AluBI AGCT 2 cut(s) 143, 186
AluI AGCT 2 cut(s) 143, 186
AlwI GGATC 2 cut(s) 170, 183
AoxI GGCC 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 146
BamHI GGATCC 1 cut(s) 175
BbsI GAAGAC 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 177
BpiI GAAGAC 1 cut(s) 102
BpuEI CTTGAG 1 cut(s) 139
Bse1I ACTGG 1 cut(s) 179
BseNI ACTGG 1 cut(s) 179
BshFI GGCC 1 cut(s) 82
BsnI GGCC 1 cut(s) 82
Bsp143I GATC 1 cut(s) 175
BspACI CCGC 2 cut(s) 197, 203
BspANI GGCC 1 cut(s) 82
BspLI GGNNCC 1 cut(s) 177
BspPI GGATC 2 cut(s) 170, 183
BsrI ACTGG 1 cut(s) 179
BssMI GATC 1 cut(s) 175
BstKTI GATC 1 cut(s) 178
BstMBI GATC 1 cut(s) 175
BstV2I GAAGAC 1 cut(s) 102
BstX2I RGATCY 1 cut(s) 175
BstYI RGATCY 1 cut(s) 175
BsuRI GGCC 1 cut(s) 82
BtsIMutI CAGTG 1 cut(s) 186
Csp6I GTAC 1 cut(s) 158
CviJI RGCY 4 cut(s) 82, 117, 143, 186
CviKI_1 RGCY 4 cut(s) 82, 117, 143, 186
CviQI GTAC 1 cut(s) 158
DpnI GATC 1 cut(s) 177
DpnII GATC 1 cut(s) 175
Eco147I AGGCCT 1 cut(s) 82
FaiI YATR 2 cut(s) 88, 147
HaeIII GGCC 1 cut(s) 82
HinfI GANTC 1 cut(s) 53
HphI GGTGA 1 cut(s) 146
Hpy188III TCNNGA 2 cut(s) 57, 108
HpyAV CCTTC 3 cut(s) 69, 107, 125
Kzo9I GATC 1 cut(s) 175
LpnPI CCDG 2 cut(s) 93, 192
MaeIII GTNAC 1 cut(s) 28
MalI GATC 1 cut(s) 177
MboI GATC 1 cut(s) 175
MboII GAAGA 5 cut(s) 74, 107, 140, 149, 156
MflI RGATCY 1 cut(s) 175
MnlI CCTC 4 cut(s) 72, 93, 166, 184
MseI TTAA 2 cut(s) 213, 220
NdeII GATC 1 cut(s) 175
NlaIV GGNNCC 1 cut(s) 177
NmuCI GTSAC 1 cut(s) 28
PceI AGGCCT 1 cut(s) 82
PfeI GAWTC 1 cut(s) 53
PspN4I GGNNCC 1 cut(s) 177
PsrI GAACNNNNNNTAC 1 cut(s) 38
PsuI RGATCY 1 cut(s) 175
RsaI GTAC 1 cut(s) 159
RsaNI GTAC 1 cut(s) 158
SaqAI TTAA 2 cut(s) 213, 220
Sau3AI GATC 1 cut(s) 175
SetI ASST 3 cut(s) 136, 145, 188
SgeI CNNG 7 cut(s) 20, 38, 69, 103, 120, 130, 191
SmlI CTYRAG 1 cut(s) 118
SmoI CTYRAG 1 cut(s) 118
SseBI AGGCCT 1 cut(s) 82
SsiI CCGC 2 cut(s) 197, 203
StuI AGGCCT 1 cut(s) 82
TaqI TCGA 1 cut(s) 25
TatI WGTACW 1 cut(s) 157
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 2 cut(s) 213, 220
Tru9I TTAA 2 cut(s) 213, 220
TscAI CASTG 1 cut(s) 186
TseFI GTSAC 1 cut(s) 28
Tsp45I GTSAC 1 cut(s) 28
TspRI CASTG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.