Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Forward (+)

5800364 .. 5805191

Gene Structure 4828 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g06530.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGAGATGCGCGGCGAAAGAAAACGGAAACCGGATTCCGACGCCGTCGGCGAAGACACCGCCTCCGCCGTCTTACTTGCCGCCCTCTCATCCCAAAACCCCGACACCCACCGCCCCTTACTCACCAAATCCCTAAACAAACTCCGCCGCCACTCCTTCCACAACCCCCTCCTCCTCTCCCTCCTCCCCACTCTCCTCACCCGCACCTCCGCCTCACTCGCCTCCCGCGCCGCCGACATGGTAGGCTCCGCCGCCCTCGAGTCCTTGGAGATGAACCGCACCCTCGCTTCCGACGCTGACGTCATCCACGCCTTGCTCTCCGCTCTCAGCAACAACCCCAGCAGCTCCGTCTCCGCCTGCAATGCGCTTCTCGATTTGTGCACTACAGTGATTGGACGACGCCGTTTGATCGAGCTCTCTGCGCTTCCTTCGATTCTATTGCTGTTTTTTCGGATTCGTAATTCTTCAACAACTTCAGTTTCGCTATGCGTTGGAGATAGGAAAGATATAAGCTCTGTTAGTGTAGGATTTAAGGAGGATGAGCTTTCGGTGTTGATTCTCAATGCTGCAGTTATTCTCATTAATACATGTGACATTGAACAATTGGAGAAGATTCCGGGACAGTTATCACAAGCTTTCTTTGCATTTATGAGGAATCTCCGGGTGAAACTGCGGATTGCAATGTCACTCGCAAGCCCTCTGGATTGTATGCCACCGGGAGAGTTGTATGTTAGTAACATTCGAGTTAGTCATGTGGCCGAAAGCCTCTTTAGGCTTTCTCTATGTGTGGCTCGGATTGTCACGCCTTTGCCTTTTCCTGTGCTTGAAAGAGGTGTGTTTGGTTCCACAGAGTCGGGTTTTAGAGATTTTGTGTTGAACCACTGGGAGGTATCACCATTTCTTGTGAAGAGGATGGCGGCAGGGGCGAAAATTGAGGAGGATGATCTTTTCGGCCCGTTATCAGCGAACTTGGTGGGAACATATCCTTCTTTTCTTTCTTCTATGCTTCCAGGGATGGTTTCTTGTCTTCCTATTGCTTCAGACGAGTTAAACATCCTTGCATTTCTGGAGGAGGTGCAGAACAAATTGGGTTGTCCTCTAGTCTACCAGCAGGACATTCGGGTTGTAAAAACAAAAAGCAAGAAGGAGGTGCATTTCTTTGCGAACAGTCTGGCATCTTGCTGCGTGAATGATCCTCATTGTCTTAGCACTGAGGATGTTTTAAAATGCGAAGAGGCATATAAAGAGGGTTACACAGTTGCGTTACGGGGAATGGAGTTCCGGTTTGGCAGTGTTGCTGCTATTGCAGAAGGATTAGCATCTATTTTCGGTCAACCATCTGTAGGTGCAAATTTGTACTTGACACCACCAAATTCCCAGGGTTTGGCTTGTCACTATGATGACCACTGTGTGTTTGTATGCCAACTTGTAGGGTGTAAGAAATGGAGGGTTTCTTCTCAGTCAAATGTTCAGTTACCTCGATTATATGATCCTCTTGATAGACTATATGGTTCTGAAGTTCATAATTCAATGGATAACTGCAAACAATATTTGCTTAGAGAAGGTGATATTTTGTATATCCCCAGAGGTGTTCTTCATGAGGCATGCACCGAGAATGTTAGTCTTGATGGGTCCGCTAGCTGTTCCTTACACATTACACTTGGTATTGAGGTTGAACCTCCTTTCGAGTGGGAAGGATTTGTTCATGTTGCATTCTTTAGTTGGTACCAGATTCAAAAACATGTTGACAATTCTTTCGAGTCTTCCATTCATGTTATATCAGCAAATCTCTTCCATGCTGCCATTGGGTTGATAGGTGGTTCTGATCCTACCTTTAGGAAAGCTTGCTTGATTGCATCAATCTTTCCACGGTCACACGCACATAACTGGCTTGATTTGGGCCAAAGAATGATTTTTCGTCAGCTGATAGATAAAATTGGTACTGAGAGTAGGTTCTTGGAAGTGTTCAGGAGCATCGAATTAGCAGTTCAGGAAAACAAGGATCCCTTGCAACGGATTAAATGGCTTGATTTTCTCAATATGGAGAAGGAAAGAAGGCCAAATCACGACCAGAATATGCCTTTCATGGAAATGAGGAATTTACTGTCATTATGTGTTCAACACAGAGACCTTGTAGAAGCTGCATTCCATCAGCTTAAATCTAGGTTTTGTGAAAATGTGATAGTTGAGGATGCAATAGTTAGTTATAAGATGCTGTTAGATAAATACAGGAATGTTAGAAAGCAATACATGAATGGAATGGTTTCACTGCATCATCAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

762

Amino Acids

84.98

Weight (kDa)

6.4

Isoelectric Point (pI)

47.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	427 - 547	2.1e-21	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2208
AasI	GACNNNNNNGTC	1 cut(s)	299
AatII	GACGTC	1 cut(s)	303
Acc65I	GGTACC	1 cut(s)	1725
AccB1I	GGYRCC	1 cut(s)	1725
AccB7I	CCANNNNNTGG	1 cut(s)	1384
AccBSI	CCGCTC	1 cut(s)	323
AccI	GTMKAC	1 cut(s)	1104
AccII	CGCG	2 cut(s)	12, 228
AclWI	GGATC	5 cut(s)	1187, 1484, 1820, 1997, 2010
AcoI	YGGCCR	1 cut(s)	756
AcsI	RAATTY	3 cut(s)	1351, 1372, 2098
AcuI	CTGAAG	3 cut(s)	459, 1023, 1536
AcyI	GRCGYC	3 cut(s)	42, 300, 400
AdeI	CACNNNGTG	1 cut(s)	1411
AfaI	GTAC	3 cut(s)	1358, 1727, 1942
AfiI	CCNNNNNNNGG	4 cut(s)	886, 1343, 1384, 2013
AflIII	ACRYGT	2 cut(s)	587, 1741
AgsI	TTSAA	8 cut(s)	468, 599, 827, 877, 1530, 1676, 1736, 2120
AjnI	CCWGG	2 cut(s)	1009, 1377
AleI	CACNNNNGTG	1 cut(s)	386
Alw21I	GWGCWC	2 cut(s)	383, 417
Alw26I	GTCTC	2 cut(s)	355, 2121
Alw44I	GTGCAC	1 cut(s)	379
AlwI	GGATC	5 cut(s)	1187, 1484, 1820, 1997, 2010
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	4 cut(s)	756, 952, 1900, 2057
ApaLI	GTGCAC	1 cut(s)	379
ApeKI	GCWGC	6 cut(s)	342, 566, 1182, 1298, 1799, 2141
ApoI	RAATTY	3 cut(s)	1351, 1372, 2098
ArsI	GACNNNNNNTTYG	2 cut(s)	1739, 1771
AseI	ATTAAT	1 cut(s)	582
Asp700I	GAANNNNTTC	1 cut(s)	2263
Asp718I	GGTACC	1 cut(s)	1725
AspLEI	GCGC	4 cut(s)	12, 230, 367, 424
AspS9I	GGNCC	3 cut(s)	953, 1632, 1900
AsuC2I	CCSGG	3 cut(s)	618, 662, 717
AsuHPI	GGTGA	5 cut(s)	115, 190, 676, 885, 1577
AsuNHI	GCTAGC	1 cut(s)	1637
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	1 cut(s)	1632
BaeGI	GKGCMC	1 cut(s)	383
BamHI	GGATCC	1 cut(s)	2002
BanI	GGYRCC	1 cut(s)	1725
BanII	GRGCYC	1 cut(s)	417
BbsI	GAAGAC	3 cut(s)	60, 1019, 1755
Bbv12I	GWGCWC	2 cut(s)	383, 417
BbvI	GCAGC	6 cut(s)	354, 553, 1169, 1285, 1786, 2128
BccI	CCATC	5 cut(s)	907, 1009, 1345, 1622, 2157
BceAI	ACGGC	3 cut(s)	29, 53, 387
BcgI	CGANNNNNNTGC	6 cut(s)	401, 421, 435, 455, 1100, 1134
BciT130I	CCWGG	2 cut(s)	1011, 1379
BcnI	CCSGG	3 cut(s)	618, 662, 717
BcoDI	GTCTC	2 cut(s)	355, 2121
BfaI	CTAG	3 cut(s)	1100, 1638, 2163
BfmI	CTRYAG	3 cut(s)	384, 567, 1341
Bme1390I	CCNGG	5 cut(s)	618, 662, 717, 1011, 1379
Bme18I	GGWCC	1 cut(s)	1632
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	3 cut(s)	953, 1632, 1900
BmiI	GGNNCC	5 cut(s)	247, 844, 1633, 1727, 2004
BmrFI	CCNGG	5 cut(s)	618, 662, 717, 1011, 1379
BmrI	ACTGGG	1 cut(s)	892
BmsI	GCATC	7 cut(s)	1184, 1328, 1865, 1983, 2182, 2202, 2281
BmtI	GCTAGC	1 cut(s)	1641
BmuI	ACTGGG	1 cut(s)	892
BpiI	GAAGAC	3 cut(s)	60, 1019, 1755
BpmI	CTGGAG	1 cut(s)	1088
BpuMI	CCSGG	3 cut(s)	618, 662, 717
BsaBI	GATNNNNATC	1 cut(s)	1318
BsaHI	GRCGYC	3 cut(s)	42, 300, 400
BsaI	GGTCTC	1 cut(s)	2121
BsaJI	CCNNGG	5 cut(s)	264, 1010, 1377, 1378, 1868
BsaWI	WCCGGW	2 cut(s)	31, 1281
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 1268, 1298
Bsc4I	CCNNNNNNNGG	4 cut(s)	886, 1343, 1384, 2013
Bse1I	ACTGG	2 cut(s)	887, 1892
Bse3DI	GCAATG	2 cut(s)	367, 687
Bse8I	GATNNNNATC	1 cut(s)	1318
BseBI	CCWGG	2 cut(s)	1011, 1379
BseDI	CCNNGG	5 cut(s)	264, 1010, 1377, 1378, 1868
BseGI	GGATG	9 cut(s)	89, 303, 544, 918, 946, 1020, 1053, 1222, 2197
BseJI	GATNNNNATC	1 cut(s)	1318
BseLI	CCNNNNNNNGG	4 cut(s)	886, 1343, 1384, 2013
BseMI	GCAATG	2 cut(s)	367, 687
BseMII	CTCAG	4 cut(s)	340, 1203, 1472, 1935
BseNI	ACTGG	2 cut(s)	887, 1892
BseRI	GAGGAG	6 cut(s)	161, 164, 173, 185, 950, 1085
BseSI	GKGCMC	1 cut(s)	383
BseXI	GCAGC	6 cut(s)	354, 553, 1169, 1285, 1786, 2128
BseYI	CCCAGC	1 cut(s)	338
BsgI	GTGCAG	1 cut(s)	1097
Bsh1236I	CGCG	2 cut(s)	12, 228
BshFI	GGCC	4 cut(s)	758, 954, 1902, 2059
BshNI	GGYRCC	1 cut(s)	1725
BsiHKAI	GWGCWC	2 cut(s)	383, 417
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	5 cut(s)	32, 617, 661, 716, 1282
BslFI	GGGAC	1 cut(s)	633
BslI	CCNNNNNNNGG	4 cut(s)	886, 1343, 1384, 2013
BsmAI	GTCTC	2 cut(s)	355, 2121
BsmBI	CGTCTC	1 cut(s)	355
BsmFI	GGGAC	1 cut(s)	633
BsmI	GAATGC	2 cut(s)	1712, 2144
BsnI	GGCC	4 cut(s)	758, 954, 1902, 2059
Bso31I	GGTCTC	1 cut(s)	2121
BsoBI	CYCGRG	1 cut(s)	257
Bsp1286I	GDGCHC	2 cut(s)	383, 417
Bsp143I	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
BspANI	GGCC	4 cut(s)	758, 954, 1902, 2059
BspCNI	CTCAG	4 cut(s)	339, 1204, 1471, 1936
BspFNI	CGCG	2 cut(s)	12, 228
BspHI	TCATGA	1 cut(s)	1597
BspLI	GGNNCC	5 cut(s)	247, 844, 1633, 1727, 2004
BspMAI	CTGCAG	1 cut(s)	571
BspOI	GCTAGC	1 cut(s)	1641
BspPI	GGATC	5 cut(s)	1187, 1484, 1820, 1997, 2010
BspT107I	GGYRCC	1 cut(s)	1725
BspTNI	GGTCTC	1 cut(s)	2121
BsrBI	CCGCTC	1 cut(s)	323
BsrDI	GCAATG	2 cut(s)	367, 687
BsrI	ACTGG	2 cut(s)	887, 1892
BssECI	CCNNGG	5 cut(s)	264, 1010, 1377, 1378, 1868
BssMI	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
BssNI	GRCGYC	3 cut(s)	42, 300, 400
BssT1I	CCWWGG	1 cut(s)	264
Bst2UI	CCWGG	2 cut(s)	1011, 1379
Bst4CI	ACNGT	7 cut(s)	388, 624, 1169, 1258, 1409, 1872, 2106
Bst6I	CTCTTC	3 cut(s)	902, 1227, 1796
BstACI	GRCGYC	3 cut(s)	42, 300, 400
BstC8I	GCNNGC	5 cut(s)	358, 694, 1606, 1639, 1846
BstDEI	CTNAG	6 cut(s)	326, 1205, 1212, 1458, 1556, 1944
BstDSI	CCRYGG	1 cut(s)	1868
BstF5I	GGATG	9 cut(s)	89, 303, 544, 918, 946, 1020, 1053, 1222, 2197
BstFNI	CGCG	2 cut(s)	12, 228
BstHHI	GCGC	4 cut(s)	12, 230, 367, 424
BstKTI	GATC	6 cut(s)	411, 946, 1195, 1492, 1828, 2005
BstMAI	GTCTC	2 cut(s)	355, 2121
BstMBI	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
BstMWI	GCNNNNNNNGC	8 cut(s)	218, 227, 293, 362, 421, 641, 923, 1304
BstNI	CCWGG	2 cut(s)	1011, 1379
BstNSI	RCATGY	3 cut(s)	591, 1608, 1745
BstSCI	CCNGG	5 cut(s)	616, 660, 715, 1009, 1377
BstSFI	CTRYAG	3 cut(s)	384, 567, 1341
BstSLI	GKGCMC	1 cut(s)	383
BstUI	CGCG	2 cut(s)	12, 228
BstV1I	GCAGC	6 cut(s)	354, 553, 1169, 1285, 1786, 2128
BstV2I	GAAGAC	3 cut(s)	60, 1019, 1755
BstX2I	RGATCY	1 cut(s)	2002
BstYI	RGATCY	1 cut(s)	2002
BsuRI	GGCC	4 cut(s)	758, 954, 1902, 2059
BtgI	CCRYGG	1 cut(s)	1868
BtsCI	GGATG	9 cut(s)	89, 303, 544, 918, 946, 1020, 1053, 1222, 2197
BtsI	GCAGTG	2 cut(s)	1297, 2267
BtsIMutI	CAGTG	6 cut(s)	393, 880, 1209, 1297, 1405, 2267
Cac8I	GCNNGC	5 cut(s)	358, 694, 1606, 1639, 1846
CciI	TCATGA	1 cut(s)	1597
CfoI	GCGC	4 cut(s)	12, 230, 367, 424
Cfr13I	GGNCC	3 cut(s)	953, 1632, 1900
CseI	GACGC	3 cut(s)	50, 302, 408
Csp6I	GTAC	3 cut(s)	1357, 1726, 1941
CviQI	GTAC	3 cut(s)	1357, 1726, 1941
DdeI	CTNAG	6 cut(s)	326, 1205, 1212, 1458, 1556, 1944
DpnI	GATC	6 cut(s)	410, 945, 1194, 1491, 1827, 2004
DpnII	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
DraI	TTTAAA	1 cut(s)	1224
DraIII	CACNNNGTG	1 cut(s)	1411
DrdI	GACNNNNNNGTC	1 cut(s)	299
DseDI	GACNNNNNNGTC	1 cut(s)	299
EaeI	YGGCCR	1 cut(s)	756
Eam1104I	CTCTTC	3 cut(s)	902, 1227, 1796
EarI	CTCTTC	3 cut(s)	902, 1227, 1796
EciI	GGCGGA	5 cut(s)	55, 134, 199, 238, 343
Ecl136II	GAGCTC	1 cut(s)	415
Eco130I	CCWWGG	1 cut(s)	264
Eco24I	GRGCYC	1 cut(s)	417
Eco31I	GGTCTC	1 cut(s)	2121
Eco47I	GGWCC	1 cut(s)	1632
Eco53kI	GAGCTC	1 cut(s)	415
Eco57I	CTGAAG	3 cut(s)	459, 1023, 1536
Eco88I	CYCGRG	1 cut(s)	257
EcoICRI	GAGCTC	1 cut(s)	415
EcoRII	CCWGG	2 cut(s)	1009, 1377
EcoT14I	CCWWGG	1 cut(s)	264
EcoT38I	GRGCYC	1 cut(s)	417
ErhI	CCWWGG	1 cut(s)	264
Esp3I	CGTCTC	1 cut(s)	355
FalI	AAGNNNNNCTT	2 cut(s)	1991, 2023
FaqI	GGGAC	1 cut(s)	633
FauI	CCCGC	2 cut(s)	209, 233
FblI	GTMKAC	1 cut(s)	1104
FokI	GGATG	9 cut(s)	76, 290, 551, 925, 953, 1027, 1040, 1229, 2204
FriOI	GRGCYC	1 cut(s)	417
FspBI	CTAG	3 cut(s)	1100, 1638, 2163
GlaI	GCGC	4 cut(s)	11, 229, 366, 423
GsaI	CCCAGC	1 cut(s)	342
GsuI	CTGGAG	1 cut(s)	1088
HaeIII	GGCC	4 cut(s)	758, 954, 1902, 2059
HapII	CCGG	5 cut(s)	32, 617, 661, 716, 1282
HgaI	GACGC	3 cut(s)	50, 302, 408
HhaI	GCGC	4 cut(s)	12, 230, 367, 424
Hin1I	GRCGYC	3 cut(s)	42, 300, 400
Hin6I	GCGC	4 cut(s)	10, 228, 365, 422
HinP1I	GCGC	4 cut(s)	10, 228, 365, 422
HincII	GTYRAC	2 cut(s)	1334, 1747
HindII	GTYRAC	2 cut(s)	1334, 1747
HindIII	AAGCTT	2 cut(s)	633, 1842
HpaII	CCGG	5 cut(s)	32, 617, 661, 716, 1282
HphI	GGTGA	5 cut(s)	115, 190, 676, 885, 1577
Hpy166II	GTNNAC	4 cut(s)	381, 1105, 1334, 1747
Hpy188I	TCNGA	7 cut(s)	40, 292, 453, 795, 1042, 1516, 1825
Hpy188III	TCNNGA	9 cut(s)	371, 701, 1067, 1496, 1598, 1625, 1969, 1991, 2066
Hpy8I	GTNNAC	4 cut(s)	381, 1105, 1334, 1747
Hpy99I	CGWCG	4 cut(s)	44, 50, 296, 402
HpyAV	CCTTC	9 cut(s)	166, 438, 996, 1138, 1304, 1556, 1688, 2041, 2049
HpyCH4III	ACNGT	7 cut(s)	388, 624, 1169, 1258, 1409, 1872, 2106
HpyCH4IV	ACGT	1 cut(s)	300
HpyF10VI	GCNNNNNNNGC	8 cut(s)	218, 227, 293, 362, 421, 641, 923, 1304
HpyF3I	CTNAG	6 cut(s)	326, 1205, 1212, 1458, 1556, 1944
HpySE526I	ACGT	1 cut(s)	300
Hsp92I	GRCGYC	3 cut(s)	42, 300, 400
HspAI	GCGC	4 cut(s)	10, 228, 365, 422
KpnI	GGTACC	1 cut(s)	1729
Kzo9I	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
LmnI	GCTCC	3 cut(s)	251, 350, 1971
Lsp1109I	GCAGC	6 cut(s)	354, 553, 1169, 1285, 1786, 2128
LweI	GCATC	7 cut(s)	1184, 1328, 1865, 1983, 2182, 2202, 2281
MaeI	CTAG	3 cut(s)	1100, 1638, 2163
MaeII	ACGT	1 cut(s)	300
MaeIII	GTNAC	9 cut(s)	590, 684, 734, 799, 1250, 1263, 1391, 1473, 1872
MalI	GATC	6 cut(s)	410, 945, 1194, 1491, 1827, 2004
MbiI	CCGCTC	1 cut(s)	323
MboI	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
MfeI	CAATTG	2 cut(s)	602, 2279
MflI	RGATCY	1 cut(s)	2002
MhlI	GDGCHC	2 cut(s)	383, 417
MlyI	GAGTC	3 cut(s)	269, 860, 1769
MmeI	TCCRAC	3 cut(s)	63, 315, 472
MroXI	GAANNNNTTC	1 cut(s)	2263
MseI	TTAA	6 cut(s)	531, 582, 1049, 1223, 2019, 2157
MslI	CAYNNNNRTG	3 cut(s)	386, 1398, 2090
MspA1I	CMGCKG	1 cut(s)	1924
MspI	CCGG	5 cut(s)	32, 617, 661, 716, 1282
MspR9I	CCNGG	5 cut(s)	618, 662, 717, 1011, 1379
MunI	CAATTG	2 cut(s)	602, 2279
Mva1269I	GAATGC	2 cut(s)	1712, 2144
MvaI	CCWGG	2 cut(s)	1011, 1379
MvnI	CGCG	2 cut(s)	12, 228
MwoI	GCNNNNNNNGC	8 cut(s)	218, 227, 293, 362, 421, 641, 923, 1304
NciI	CCSGG	3 cut(s)	618, 662, 717
NdeII	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
NheI	GCTAGC	1 cut(s)	1637
NlaIV	GGNNCC	5 cut(s)	247, 844, 1633, 1727, 2004
NmuCI	GTSAC	5 cut(s)	590, 684, 799, 1391, 1872
NspI	RCATGY	3 cut(s)	591, 1608, 1745
OliI	CACNNNNGTG	1 cut(s)	386
PaeI	GCATGC	1 cut(s)	1608
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	1 cut(s)	1597
PasI	CCCWGGG	1 cut(s)	1378
PciI	ACATGT	2 cut(s)	587, 1741
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	2 cut(s)	1712, 2144
PdmI	GAANNNNTTC	1 cut(s)	2263
PfeI	GAWTC	7 cut(s)	35, 433, 454, 556, 613, 655, 1732
PflFI	GACNNNGTC	1 cut(s)	44
PflMI	CCANNNNNTGG	1 cut(s)	1384
PfoI	TCCNGGA	1 cut(s)	616
PleI	GAGTC	3 cut(s)	268, 859, 1768
PpsI	GAGTC	3 cut(s)	268, 859, 1768
PscI	ACATGT	2 cut(s)	587, 1741
PshBI	ATTAAT	1 cut(s)	582
PsiI	TTATAA	1 cut(s)	2208
Psp124BI	GAGCTC	1 cut(s)	417
Psp6I	CCWGG	2 cut(s)	1009, 1377
PspFI	CCCAGC	1 cut(s)	338
PspGI	CCWGG	2 cut(s)	1009, 1377
PspN4I	GGNNCC	5 cut(s)	247, 844, 1633, 1727, 2004
PspPI	GGNCC	3 cut(s)	953, 1632, 1900
PspXI	VCTCGAGB	1 cut(s)	257
PstI	CTGCAG	1 cut(s)	571
PsuI	RGATCY	1 cut(s)	2002
PsyI	GACNNNGTC	1 cut(s)	44
PvuII	CAGCTG	1 cut(s)	1924
RsaI	GTAC	3 cut(s)	1358, 1727, 1942
RsaNI	GTAC	3 cut(s)	1357, 1726, 1941
RseI	CAYNNNNRTG	3 cut(s)	386, 1398, 2090
SacI	GAGCTC	1 cut(s)	417
SaqAI	TTAA	6 cut(s)	531, 582, 1049, 1223, 2019, 2157
Sau3AI	GATC	6 cut(s)	408, 943, 1192, 1489, 1825, 2002
Sau96I	GGNCC	3 cut(s)	953, 1632, 1900
SchI	GAGTC	3 cut(s)	269, 860, 1769
ScrFI	CCNGG	5 cut(s)	618, 662, 717, 1011, 1379
SduI	GDGCHC	2 cut(s)	383, 417
SfaNI	GCATC	7 cut(s)	1184, 1328, 1865, 1983, 2182, 2202, 2281
SfcI	CTRYAG	3 cut(s)	384, 567, 1341
Sfr274I	CTCGAG	1 cut(s)	257
SinI	GGWCC	1 cut(s)	1632
SlaI	CTCGAG	1 cut(s)	257
SmiMI	CAYNNNNRTG	3 cut(s)	386, 1398, 2090
SmlI	CTYRAG	1 cut(s)	257
SmoI	CTYRAG	1 cut(s)	257
SphI	GCATGC	1 cut(s)	1608
SspI	AATATT	1 cut(s)	1550
SspMI	CTAG	3 cut(s)	1100, 1638, 2163
SstI	GAGCTC	1 cut(s)	417
StyD4I	CCNGG	5 cut(s)	616, 660, 715, 1009, 1377
StyI	CCWWGG	1 cut(s)	264
TaaI	ACNGT	7 cut(s)	388, 624, 1169, 1258, 1409, 1872, 2106
TaiI	ACGT	1 cut(s)	303
TaqI	TCGA	9 cut(s)	258, 372, 411, 431, 742, 1480, 1686, 1758, 1977
TaqII	GACCGA	1 cut(s)	1319
TatI	WGTACW	1 cut(s)	1356
TauI	GCSGC	6 cut(s)	15, 83, 150, 233, 254, 920
TfiI	GAWTC	7 cut(s)	35, 433, 454, 556, 613, 655, 1732
Tru1I	TTAA	6 cut(s)	531, 582, 1049, 1223, 2019, 2157
Tru9I	TTAA	6 cut(s)	531, 582, 1049, 1223, 2019, 2157
TscAI	CASTG	6 cut(s)	393, 887, 1216, 1297, 1412, 2274
TseFI	GTSAC	5 cut(s)	590, 684, 799, 1391, 1872
TseI	GCWGC	6 cut(s)	342, 566, 1182, 1298, 1799, 2141
Tsp45I	GTSAC	5 cut(s)	590, 684, 799, 1391, 1872
TspDTI	ATGAA	7 cut(s)	287, 1511, 1586, 1694, 1760, 2074, 2267
TspGWI	ACGGA	3 cut(s)	40, 337, 2029
TspRI	CASTG	6 cut(s)	393, 887, 1216, 1297, 1412, 2274
Tth111I	GACNNNGTC	1 cut(s)	44
Van91I	CCANNNNNTGG	1 cut(s)	1384
VneI	GTGCAC	1 cut(s)	379
VpaK11BI	GGWCC	1 cut(s)	1632
VspI	ATTAAT	1 cut(s)	582
XapI	RAATTY	3 cut(s)	1351, 1372, 2098
XceI	RCATGY	3 cut(s)	591, 1608, 1745
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1802
XhoI	CTCGAG	1 cut(s)	257
XmiI	GTMKAC	1 cut(s)	1104
XmnI	GAANNNNTTC	1 cut(s)	2263
XspI	CTAG	3 cut(s)	1100, 1638, 2163
ZraI	GACGTC	1 cut(s)	301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.