Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Forward (+)

15093119 .. 15097116

Gene Structure 3998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G007210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGAGAGGCGCAGCAAAAGAAAACGGAAACCGGAATCCGACGCGGCCGTCAGTGAAGACACCACCGCCTTCGCCGTCTTACTCTCCGCCCTCTCCTCTCAAAACCCCGACTCCCACCGCCCCTTACTCACCAAATGCCTCAACAAACTCCGCCGCTCCTTCCGCAACCCCCTCCTCTCTCTCCTCCCCACTCTCCTCACCCGCACCTCCGCTTCCCTCGCCTCCCGCGCCGCCGACATGGTGGGCTCCGCCGCCCTCGAGTCCCTCGACATGAACCGCACCATCGCTTCCGACGCTGACATCATCCATGCCTTGCTCTCCAGGTCCTCCGTCTCCGCCTGCAACGCTCTTCTCGATTTGTGCACTACTTGGTTCGGACGACGCCGTTTGATCGAGTTCTCTGCTCTTCCGACGATTCTATTTCGGTTTCTTCGGGTTCGTAAATATTCAACAATTTCAGTTATTCTGTGCTCTGCCTCTGGGGATAGCAAAGATGTAAACTCTGTTAGTGTAGGATTTAAGATGGATGAAGTTTCTGTGTTGATTCTCAATGCTGCAATTATTCTCATCAATACCTGTGACATTGAGCAATTGGAGAAAATCCCGGGACACCTATCGCAAGCTTTCTTTGCATTTATGAGGAATCTGTGGGCGAATGTGCGAAATGCAATGTCACTCGCAAGCCCTTTGGATTCTACACCAGGGGGAGACATGTATATTAGCAACATTAGAGTTGGTCATGTGGCCGAAAGCCTGTTCAGGCTTTCCATTTGTGCGTCTCGGCTCGTCACGCCTTTGCCTTTTCGTGTGGTTGAGAGAGGTGTATTTGGTTTCACTGAGTCGGGTTTTAGAGGTTTTATGTCTAGCCACTGGGAGGTATCACCATTTCTTGTGAGGAGGCTGTCAGCTGGGGTGAAAATTGAGGAGGATGATTTTTTTGGCCCATTATCAGTGAATTTGGTGGGAGCATATCCTTTCTTTCTTTCATCAATCCTTCCAGGGATGGTTTCTTGTCTTCCTATTTCTTCAGATGAGTTAAACATCCTTGCATTTCTGGAAGAGGCGCGGAGCAAATTGGGTTGTCCCCTAATTTACCAGCAGGACATTCGGGTTGTTAAAACGAAAAGCAAGAAGGAGGTGCATTTCTTTGTGGACAGTCTGGCATCTTGCTGCATAAAGGATCCTCATTGTCTTAGTGCAGAGGATGTTTCAAAATGTGAAGAAGCATATAAAGAGGGTTATACAGTTGCGTTACGTGGAATGGAGTTCCGGTTTGACAGTGTTGCTGCTATTGCAGAAGGATTAGCCTCTGTTTTTGGTCAACCATCTGTAGGTGCTAATATGTACTTGACACCACCAGACTCTCAGGGCTTGGCTTGTCACTATGATGACCACTGTGTGTTTGTATGCCAACTTGTTGGGACTAAGAAATGGAGAGTTTCTTCTCAGTCAAATGCTCAGTTACCTCGATTGTATGACCCTCTTGATAGACTACACGGTTCAGAAGTTCAGAATTCAATGGATGACTGCAAACAATATTTGCTTAGAGAAGGTGATATTTTGTATATCCCCAGAGGTGTTCTTCATGAGTCATGCACCGAGAATGTTAGTCTTGATGGGTCTGCTGGCTGTTCCTTACACATTACACTTGGTATCGAGGTTGAACCTCCTTTCGAGTGGGAAGGATTTGTTCATGTTGCATTCTTCAGTTGGTACCAGAAGCAAAAACAAGTTACCAATTCTTTTGAGTCTTCATCTGGAACCAATCATGATATATCTGCGAATCTCTTCCATGTTGCCATTGGGTTGATAGGTGATTCAGATTCTACCTTTAGGAAGGCTTGCTTGGTTGCTTCAATCTTTTCCAGTTCACATACAAATAACTGGCTTGATTTAAACCAGAGAATCATCTTCTCTCAGCTGATTGATAAAATTATTACTCAGACAAGGTTCTTGGAAATGTTCAGGAGCATAGAATTAGCAGTCCAGGAAAACAAGGATTCCTTACAACGAATTAAATGGCTCGGTTTTCTCAATCTGGATAAGGAAAGCAGTCTAAATCATGACCAGAATATGCCTTTCATGGGGATGAAAAATTTATTGTCATTATGTATTCAACACAAAGACAATGTAGAAGCTGCATTCCAGCAGCTTAAATCTAGGTTCTGTGAAAACGTGATATTCGAGGATGCAGTAGTTAGTTATAAATTACTGTTAGATAAATACAGGAACGTCAGAAAGCAGTATATGAATGGAATGGTTTCACTGCATCATCAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

760

Amino Acids

84.99

Weight (kDa)

6.71

Isoelectric Point (pI)

51.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	422 - 545	8.3e-22	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2205
AasI	GACNNNNNNGTC	1 cut(s)	47
Acc65I	GGTACC	1 cut(s)	1713
AccB1I	GGYRCC	1 cut(s)	1713
AccBSI	CCGCTC	1 cut(s)	156
AccII	CGCG	3 cut(s)	44, 228, 1066
AclWI	GGATC	2 cut(s)	1175, 1188
AcoI	YGGCCR	2 cut(s)	45, 744
AcsI	RAATTY	3 cut(s)	955, 1513, 2095
AcuI	CTGAAG	2 cut(s)	1011, 1690
AcyI	GRCGYC	1 cut(s)	382
AdeI	CACNNNGTG	1 cut(s)	1399
AfaI	GTAC	2 cut(s)	1346, 1715
AfiI	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
AflIII	ACRYGT	1 cut(s)	711
AgsI	TTSAA	6 cut(s)	450, 1212, 1518, 1664, 1857, 2117
AjnI	CCWGG	4 cut(s)	320, 700, 997, 1986
AjuI	GAANNNNNNNTTGG	2 cut(s)	1829, 1861
AluBI	AGCT	5 cut(s)	623, 908, 1921, 2138, 2152
AluI	AGCT	5 cut(s)	623, 908, 1921, 2138, 2152
Alw21I	GWGCWC	2 cut(s)	365, 473
Alw26I	GTCTC	3 cut(s)	337, 702, 783
Alw44I	GTGCAC	1 cut(s)	361
AlwI	GGATC	2 cut(s)	1175, 1188
Ama87I	CYCGRG	2 cut(s)	257, 604
AoxI	GGCC	3 cut(s)	45, 744, 940
ApaLI	GTGCAC	1 cut(s)	361
ApeKI	GCWGC	6 cut(s)	12, 554, 1170, 1286, 2138, 2149
ApoI	RAATTY	3 cut(s)	955, 1513, 2095
Asp700I	GAANNNNTTC	2 cut(s)	1787, 2260
Asp718I	GGTACC	1 cut(s)	1713
AspLEI	GCGC	3 cut(s)	12, 230, 1066
AspS9I	GGNCC	2 cut(s)	324, 941
AsuC2I	CCSGG	2 cut(s)	605, 606
AsuHPI	GGTGA	6 cut(s)	121, 190, 873, 925, 1565, 1826
AvaI	CYCGRG	2 cut(s)	257, 604
AvaII	GGWCC	1 cut(s)	324
BaeGI	GKGCMC	1 cut(s)	365
BamHI	GGATCC	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	1713
BanII	GRGCYC	1 cut(s)	248
BbsI	GAAGAC	3 cut(s)	63, 1007, 1743
Bbv12I	GWGCWC	2 cut(s)	365, 473
BbvI	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
BccI	CCATC	5 cut(s)	290, 517, 997, 1333, 1610
BceAI	ACGGC	3 cut(s)	32, 59, 369
BcgI	CGANNNNNNTGC	4 cut(s)	383, 417, 1088, 1122
BciT130I	CCWGG	4 cut(s)	322, 702, 999, 1988
BcnI	CCSGG	2 cut(s)	605, 606
BcoDI	GTCTC	3 cut(s)	337, 702, 783
BfaI	CTAG	2 cut(s)	864, 2160
BfmI	CTRYAG	1 cut(s)	1329
Bme1390I	CCNGG	6 cut(s)	322, 605, 606, 702, 999, 1988
Bme18I	GGWCC	1 cut(s)	324
BmeT110I	CYCGRG	2 cut(s)	257, 604
BmgT120I	GGNCC	2 cut(s)	324, 941
BmiI	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
BmrFI	CCNGG	6 cut(s)	322, 605, 606, 702, 999, 1988
BmrI	ACTGGG	1 cut(s)	880
BmsI	GCATC	3 cut(s)	1172, 2179, 2278
BmuI	ACTGGG	1 cut(s)	880
BpiI	GAAGAC	3 cut(s)	63, 1007, 1743
BpmI	CTGGAG	1 cut(s)	304
BpuMI	CCSGG	2 cut(s)	605, 606
BsaAI	YACGTR	1 cut(s)	1256
BsaHI	GRCGYC	1 cut(s)	382
BsaJI	CCNNGG	3 cut(s)	604, 701, 998
BsaWI	WCCGGW	2 cut(s)	31, 1269
BsaXI	ACNNNNNCTCC	4 cut(s)	95, 125, 1256, 1286
Bsc4I	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
Bse1I	ACTGG	3 cut(s)	875, 1866, 1889
Bse3DI	GCAATG	1 cut(s)	675
BseBI	CCWGG	4 cut(s)	322, 702, 999, 1988
BseDI	CCNNGG	3 cut(s)	604, 701, 998
BseGI	GGATG	9 cut(s)	303, 532, 934, 1008, 1041, 1210, 1528, 2094, 2194
BseLI	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	6 cut(s)	828, 1379, 1460, 1472, 1931, 1955
BseNI	ACTGG	3 cut(s)	875, 1866, 1889
BseRI	GAGGAG	6 cut(s)	85, 164, 173, 185, 910, 938
BseSI	GKGCMC	1 cut(s)	365
BseX3I	CGGCCG	1 cut(s)	45
BseXI	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
BseYI	CCCAGC	1 cut(s)	908
BsgI	GTGCAG	1 cut(s)	1218
Bsh1236I	CGCG	3 cut(s)	44, 228, 1066
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	3 cut(s)	47, 746, 942
BshNI	GGYRCC	1 cut(s)	1713
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	365, 473
BsiHKCI	CYCGRG	2 cut(s)	257, 604
BsiSI	CCGG	3 cut(s)	32, 605, 1270
BslFI	GGGAC	4 cut(s)	247, 621, 1068, 1435
BslI	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
BsmAI	GTCTC	3 cut(s)	337, 702, 783
BsmBI	CGTCTC	2 cut(s)	337, 783
BsmFI	GGGAC	4 cut(s)	247, 621, 1068, 1435
BsmI	GAATGC	2 cut(s)	1700, 2141
BsnI	GGCC	3 cut(s)	47, 746, 942
BsoBI	CYCGRG	2 cut(s)	257, 604
Bsp1286I	GDGCHC	3 cut(s)	248, 365, 473
Bsp143I	GATC	2 cut(s)	390, 1180
BspANI	GGCC	3 cut(s)	47, 746, 942
BspCNI	CTCAG	6 cut(s)	829, 1378, 1459, 1471, 1930, 1954
BspFNI	CGCG	3 cut(s)	44, 228, 1066
BspHI	TCATGA	3 cut(s)	1585, 1768, 2062
BspLI	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
BspPI	GGATC	2 cut(s)	1175, 1188
BspQI	GCTCTTC	2 cut(s)	354, 411
BspT107I	GGYRCC	1 cut(s)	1713
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	1 cut(s)	675
BsrI	ACTGG	3 cut(s)	875, 1866, 1889
BssECI	CCNNGG	3 cut(s)	604, 701, 998
BssMI	GATC	2 cut(s)	390, 1180
BssNI	GRCGYC	1 cut(s)	382
Bst2UI	CCWGG	4 cut(s)	322, 702, 999, 1988
Bst4CI	ACNGT	6 cut(s)	1157, 1246, 1280, 1397, 1499, 2214
Bst6I	CTCTTC	4 cut(s)	354, 411, 1053, 1793
BstACI	GRCGYC	1 cut(s)	382
BstBAI	YACGTR	1 cut(s)	1256
BstC8I	GCNNGC	5 cut(s)	340, 621, 682, 1627, 1843
BstDEI	CTNAG	9 cut(s)	837, 1193, 1365, 1425, 1446, 1458, 1544, 1917, 1941
BstF5I	GGATG	9 cut(s)	303, 532, 934, 1008, 1041, 1210, 1528, 2094, 2194
BstFNI	CGCG	3 cut(s)	44, 228, 1066
BstHHI	GCGC	3 cut(s)	12, 230, 1066
BstKTI	GATC	2 cut(s)	393, 1183
BstMAI	GTCTC	3 cut(s)	337, 702, 783
BstMBI	GATC	2 cut(s)	390, 1180
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 218, 227, 293, 344, 629, 790, 1292
BstNI	CCWGG	4 cut(s)	322, 702, 999, 1988
BstNSI	RCATGY	1 cut(s)	715
BstSCI	CCNGG	6 cut(s)	320, 603, 604, 700, 997, 1986
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	1 cut(s)	365
BstUI	CGCG	3 cut(s)	44, 228, 1066
BstV1I	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
BstV2I	GAAGAC	3 cut(s)	63, 1007, 1743
BstX2I	RGATCY	1 cut(s)	1180
BstXI	CCANNNNNNTGG	1 cut(s)	1418
BstYI	RGATCY	1 cut(s)	1180
BstZI	CGGCCG	1 cut(s)	45
BsuRI	GGCC	3 cut(s)	47, 746, 942
BtgZI	GCGATG	1 cut(s)	268
BtsCI	GGATG	9 cut(s)	303, 532, 934, 1008, 1041, 1210, 1528, 2094, 2194
BtsI	GCAGTG	1 cut(s)	2264
BtsIMutI	CAGTG	7 cut(s)	58, 834, 868, 957, 1285, 1393, 2264
Cac8I	GCNNGC	5 cut(s)	340, 621, 682, 1627, 1843
CciI	TCATGA	3 cut(s)	1585, 1768, 2062
CfoI	GCGC	3 cut(s)	12, 230, 1066
Cfr13I	GGNCC	2 cut(s)	324, 941
Cfr9I	CCCGGG	1 cut(s)	604
CseI	GACGC	4 cut(s)	50, 302, 390, 765
Csp6I	GTAC	2 cut(s)	1345, 1714
CviQI	GTAC	2 cut(s)	1345, 1714
DdeI	CTNAG	9 cut(s)	837, 1193, 1365, 1425, 1446, 1458, 1544, 1917, 1941
DpnI	GATC	2 cut(s)	392, 1182
DpnII	GATC	2 cut(s)	390, 1180
DraI	TTTAAA	1 cut(s)	1896
DraIII	CACNNNGTG	1 cut(s)	1399
DrdI	GACNNNNNNGTC	1 cut(s)	47
DseDI	GACNNNNNNGTC	1 cut(s)	47
EaeI	YGGCCR	2 cut(s)	45, 744
EagI	CGGCCG	1 cut(s)	45
Eam1104I	CTCTTC	4 cut(s)	354, 411, 1053, 1793
EarI	CTCTTC	4 cut(s)	354, 411, 1053, 1793
EciI	GGCGGA	4 cut(s)	76, 140, 238, 325
EclXI	CGGCCG	1 cut(s)	45
Eco24I	GRGCYC	1 cut(s)	248
Eco47I	GGWCC	1 cut(s)	324
Eco52I	CGGCCG	1 cut(s)	45
Eco57I	CTGAAG	2 cut(s)	1011, 1690
Eco88I	CYCGRG	2 cut(s)	257, 604
EcoO109I	RGGNCCY	1 cut(s)	324
EcoRI	GAATTC	1 cut(s)	1513
EcoRII	CCWGG	4 cut(s)	320, 700, 997, 1986
EcoT38I	GRGCYC	1 cut(s)	248
Esp3I	CGTCTC	2 cut(s)	337, 783
FalI	AAGNNNNNCTT	4 cut(s)	1829, 1861, 1988, 2020
FaqI	GGGAC	4 cut(s)	247, 621, 1068, 1435
FauI	CCCGC	2 cut(s)	209, 233
FokI	GGATG	9 cut(s)	290, 539, 941, 1015, 1028, 1217, 1535, 2101, 2201
FriOI	GRGCYC	1 cut(s)	248
FspBI	CTAG	2 cut(s)	864, 2160
GlaI	GCGC	3 cut(s)	11, 229, 1065
GsaI	CCCAGC	1 cut(s)	912
GsuI	CTGGAG	1 cut(s)	304
HaeIII	GGCC	3 cut(s)	47, 746, 942
HapII	CCGG	3 cut(s)	32, 605, 1270
HgaI	GACGC	4 cut(s)	50, 302, 390, 765
HhaI	GCGC	3 cut(s)	12, 230, 1066
Hin1I	GRCGYC	1 cut(s)	382
Hin6I	GCGC	3 cut(s)	10, 228, 1064
HinP1I	GCGC	3 cut(s)	10, 228, 1064
HincII	GTYRAC	1 cut(s)	1322
HindII	GTYRAC	1 cut(s)	1322
HindIII	AAGCTT	1 cut(s)	621
HpaII	CCGG	3 cut(s)	32, 605, 1270
HphI	GGTGA	6 cut(s)	121, 190, 873, 925, 1565, 1826
Hpy166II	GTNNAC	5 cut(s)	363, 499, 1153, 1322, 1871
Hpy8I	GTNNAC	5 cut(s)	363, 499, 1153, 1322, 1871
Hpy99I	CGWCG	4 cut(s)	44, 296, 384, 415
HpyAV	CCTTC	8 cut(s)	79, 169, 1004, 1126, 1292, 1544, 1676, 1831
HpyCH4III	ACNGT	6 cut(s)	1157, 1246, 1280, 1397, 1499, 2214
HpyCH4IV	ACGT	3 cut(s)	1255, 2175, 2232
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 218, 227, 293, 344, 629, 790, 1292
HpyF3I	CTNAG	9 cut(s)	837, 1193, 1365, 1425, 1446, 1458, 1544, 1917, 1941
HpySE526I	ACGT	3 cut(s)	1255, 2175, 2232
Hsp92I	GRCGYC	1 cut(s)	382
HspAI	GCGC	3 cut(s)	10, 228, 1064
KpnI	GGTACC	1 cut(s)	1717
Kzo9I	GATC	2 cut(s)	390, 1180
LguI	GCTCTTC	2 cut(s)	354, 411
LmnI	GCTCC	5 cut(s)	161, 251, 965, 1068, 1968
Lsp1109I	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
LweI	GCATC	3 cut(s)	1172, 2179, 2278
MaeI	CTAG	2 cut(s)	864, 2160
MaeII	ACGT	3 cut(s)	1255, 2175, 2232
MaeIII	GTNAC	7 cut(s)	578, 672, 787, 1251, 1379, 1461, 1732
MalI	GATC	2 cut(s)	392, 1182
MbiI	CCGCTC	1 cut(s)	156
MboI	GATC	2 cut(s)	390, 1180
MfeI	CAATTG	2 cut(s)	590, 2276
MflI	RGATCY	1 cut(s)	1180
MhlI	GDGCHC	3 cut(s)	248, 365, 473
MlyI	GAGTC	6 cut(s)	104, 269, 848, 1355, 1598, 1757
MmeI	TCCRAC	3 cut(s)	63, 315, 434
MroXI	GAANNNNTTC	2 cut(s)	1787, 2260
MseI	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
MslI	CAYNNNNRTG	2 cut(s)	1386, 2087
MspA1I	CMGCKG	2 cut(s)	908, 1921
MspI	CCGG	3 cut(s)	32, 605, 1270
MspR9I	CCNGG	6 cut(s)	322, 605, 606, 702, 999, 1988
MunI	CAATTG	2 cut(s)	590, 2276
Mva1269I	GAATGC	2 cut(s)	1700, 2141
MvaI	CCWGG	4 cut(s)	322, 702, 999, 1988
MvnI	CGCG	3 cut(s)	44, 228, 1066
MwoI	GCNNNNNNNGC	8 cut(s)	162, 218, 227, 293, 344, 629, 790, 1292
NciI	CCSGG	2 cut(s)	605, 606
NdeII	GATC	2 cut(s)	390, 1180
NlaIV	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
NmeAIII	GCCGAG	1 cut(s)	760
NmuCI	GTSAC	4 cut(s)	578, 672, 787, 1379
NspI	RCATGY	1 cut(s)	715
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	3 cut(s)	1585, 1768, 2062
PciI	ACATGT	1 cut(s)	711
PciSI	GCTCTTC	2 cut(s)	354, 411
PcsI	WCGNNNNNNNCGW	3 cut(s)	264, 351, 2181
PctI	GAATGC	2 cut(s)	1700, 2141
PdmI	GAANNNNTTC	2 cut(s)	1787, 2260
PfoI	TCCNGGA	1 cut(s)	1986
PleI	GAGTC	6 cut(s)	104, 268, 847, 1355, 1597, 1756
PpsI	GAGTC	6 cut(s)	104, 268, 847, 1355, 1597, 1756
Ppu21I	YACGTR	1 cut(s)	1256
PpuMI	RGGWCCY	1 cut(s)	324
PscI	ACATGT	1 cut(s)	711
PsiI	TTATAA	1 cut(s)	2205
Psp5II	RGGWCCY	1 cut(s)	324
Psp6I	CCWGG	4 cut(s)	320, 700, 997, 1986
PspFI	CCCAGC	1 cut(s)	908
PspGI	CCWGG	4 cut(s)	320, 700, 997, 1986
PspN4I	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
PspPI	GGNCC	2 cut(s)	324, 941
PspPPI	RGGWCCY	1 cut(s)	324
PspXI	VCTCGAGB	1 cut(s)	257
PsuI	RGATCY	1 cut(s)	1180
PvuII	CAGCTG	2 cut(s)	908, 1921
RsaI	GTAC	2 cut(s)	1346, 1715
RsaNI	GTAC	2 cut(s)	1345, 1714
RseI	CAYNNNNRTG	2 cut(s)	1386, 2087
SapI	GCTCTTC	2 cut(s)	354, 411
SaqAI	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
Sau3AI	GATC	2 cut(s)	390, 1180
Sau96I	GGNCC	2 cut(s)	324, 941
SchI	GAGTC	6 cut(s)	104, 269, 848, 1355, 1598, 1757
ScrFI	CCNGG	6 cut(s)	322, 605, 606, 702, 999, 1988
SduI	GDGCHC	3 cut(s)	248, 365, 473
SfaNI	GCATC	3 cut(s)	1172, 2179, 2278
SfcI	CTRYAG	1 cut(s)	1329
Sfr274I	CTCGAG	1 cut(s)	257
SinI	GGWCC	1 cut(s)	324
SlaI	CTCGAG	1 cut(s)	257
SmaI	CCCGGG	1 cut(s)	606
SmiMI	CAYNNNNRTG	2 cut(s)	1386, 2087
SmlI	CTYRAG	1 cut(s)	257
SmoI	CTYRAG	1 cut(s)	257
SspI	AATATT	2 cut(s)	446, 1538
SspMI	CTAG	2 cut(s)	864, 2160
StyD4I	CCNGG	6 cut(s)	320, 603, 604, 700, 997, 1986
TaaI	ACNGT	6 cut(s)	1157, 1246, 1280, 1397, 1499, 2214
TaiI	ACGT	3 cut(s)	1258, 2178, 2235
TaqI	TCGA	8 cut(s)	258, 267, 354, 393, 1468, 1656, 1674, 2184
TatI	WGTACW	1 cut(s)	1344
TauI	GCSGC	4 cut(s)	47, 156, 233, 254
Tru1I	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
Tru9I	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
TscAI	CASTG	7 cut(s)	58, 841, 875, 957, 1285, 1400, 2271
TseFI	GTSAC	4 cut(s)	578, 672, 787, 1379
TseI	GCWGC	6 cut(s)	12, 554, 1170, 1286, 2138, 2149
Tsp45I	GTSAC	4 cut(s)	578, 672, 787, 1379
TspDTI	ATGAA	9 cut(s)	287, 543, 975, 1574, 1682, 1743, 2071, 2105, 2264
TspGWI	ACGGA	2 cut(s)	40, 319
TspMI	CCCGGG	1 cut(s)	604
TspRI	CASTG	7 cut(s)	58, 841, 875, 957, 1285, 1400, 2271
VneI	GTGCAC	1 cut(s)	361
VpaK11BI	GGWCC	1 cut(s)	324
XapI	RAATTY	3 cut(s)	955, 1513, 2095
XceI	RCATGY	1 cut(s)	715
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1799
XhoI	CTCGAG	1 cut(s)	257
XmaI	CCCGGG	1 cut(s)	604
XmnI	GAANNNNTTC	2 cut(s)	1787, 2260
XspI	CTAG	2 cut(s)	864, 2160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.