Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Reverse (-)

51532478 .. 51536419

Gene Structure 3942 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009361

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGAGAGGCGCAGCAAAAGAAAGCGGAAACCGGAATCCGACGCCGTCGGCGAAGACACTACCACCGCCTTTGCCGTCTTACTCTCCGCCCTCTCATCTCAAAACCCCGACTCCCACCGCCCCTTACTCTCCAAATGCCTCAACAAACTCTGCCGCTCCTTCCACAACCCCCTCCTCTCTCTCCTCCCCACTCTCCTCACCCGCACCTCCGCTTCCCTCGCTTCCCGCGCCGCCGACATGGTGGGCTCCGCCGCCCTCGAGTCCCTCGACATGAACCTCACCATCGCTTCCGACGCTGACATCATCCATGCCTTGCTCTCCAGGTCCTCCGTCTCCGCCTGCAATGCTCTTCTCGATTTGTGCACTACTTGGGTCGGAAGACGCCGATTGATCGAGTTCTCTGCTCTTCCGACGATTCTATTTCGGTTTCTTCGGGTTCATAAATATTCAACAATTTCAGTTATTGTGTGCTCTGCCTCTGGGGATAGCAAAGATGTAAATTCTGTTAGTGTAGGATTTAAGATGGATGAAGTTTCTGTGTTGATCCTCAATGCTGCAATTATTCTCATCAATGCCTGTGACATTGAACAATTGGAGAAAATCCCAGGACACCTTTCGCAAGCTTTCTTTGCATTTATGAGGAATCTGTGGGCGAATGTGCGAAATGCAATGTCACTTGCAAGCCCTTTGGATTCTACAAGTGTAGGAGACTTGTATATTAGCAACATTAGAGTTGGCCACGTGGCCGAAAGCCTGTTCAGGCTTTCCATTTGCGCGTCTCGGCTTGTCACGCCTTTGCCATCTAGTGTGGTTGAAAGAGGTGTATTTGGATTCACTGAGTCGGGTTTTAGAGATTTTGTGTTGAACCACTGGGAGGTGTCTCCATTTCTTGTGAGGAGGCTGTCAGCGGGGGCGAAGATTGAGGAGGATGATCTTTTCGGCCCGTTATCAGTGAACTTGGTGGGAGCATATCCTTCTTTTCTTTCATCTATCCTTTCAGGGATGGTTTCTTGTCTCCCTGTTTCTTCAGACGAGTTAAATATCCTTGCATTTCTGGAAGAGGCGCAGAGCAAATTGGGTTGTCCTCTAATTTACCAGCAGGACATTCGGGTTGTTAAAACGAAAAGCAAGAAGGAGGTGCATTTCTTTGTGGACAGTCTGGCATCTTGCTGCATAAAGGATCCTTATTGTCTTAGTGCCGAGGATGTTTCAAAATGCGAAGAAGCATATAAAGACGGTTATACAGTTGCGTTACGCGGAATGGAGTTCCGGTTTGACAGTATTGCTGCTATTGCAGAAGGATTAGCATCTGTTTTTGGTCAACCATCTGTAGGTGCTAATATGTACTTGACACCACCAAATTCTCAGGGCTTGGCTTGTCACTATGATGACCACTGTGTGTTTGTATGCCAACTTGTTGGGACTAAGAAATGGATAGTTTCTTCTCAGTCAAATGTTCAGTTACCTCGATTGTATGACCCTCTTGACAGACTACACGGTTCAGAAGTTCAGAATTCAATGGGTGACTGCAAACAATATTTGCTTAGAGAAGGTGATATTTTGTATATCCCCAGAGGTGTTCTTCATGAGGCTTGCACTGAGAATGTTAGTCTTGATGGGTCTGCTAGCTGTTCCTTACACATTACACTTGGTATCGAGGTTGAACCTCCTTTCGAGTGGGAAGGATTTGTTCATGTTGCATTCTTCAGTTGGTACCAAAAGCAAAAACAAGTTGACAACTCTTTTGAGTCTTCATCTGGAACCATTCATGATATATCTGCGAATCTGTTCCATGTTGCCATTGGGTTGATAGGTGATTCTGATCCTACCTTTAGGAAGGCTTGCTTGGTTGCTTCAATCTTTTCCAGTTCACATACAAATAACTGGCTTGATTTAAACCAGAGAATCATGTTCTCTCAGCTGATTGATAAAATTAGTACTCAGACAAGGTTCTTGGAAATGTTCAGGAGCATAGAATTAGCAGTCCAGGAAAACAAGGATTCCTTACAACGAATTAAATGGCTCGGTTTTCTCAATATGGATAAGGAAAGCAGTCTAAATCATGACCAGAATATGCCTTTCAGGGGGATGAAAAATTTATTGTCATCATGTATTCAACACAAAGACAATGTAGAAGCTGCATTCCAGCAGCTTAAATCTAGGTTCTGTGAAAACGTGATATTCGAGGATGCAATAGTTAGTTATAAGTTACTGTTAGATAAATACAGGAATGTCAGAAAGCAGTATATGAATGGAATGGTTTCACTGCATCATCAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

761

Amino Acids

84.56

Weight (kDa)

6.18

Isoelectric Point (pI)

50.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	422 - 543	1.3e-20	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2205
Acc65I	GGTACC	1 cut(s)	1713
AccB1I	GGYRCC	1 cut(s)	1713
AccBSI	CCGCTC	1 cut(s)	156
AccII	CGCG	3 cut(s)	228, 776, 1257
AclWI	GGATC	4 cut(s)	538, 1175, 1188, 1817
AcoI	YGGCCR	2 cut(s)	736, 744
AcsI	RAATTY	4 cut(s)	499, 1360, 1513, 2095
AcuI	CTGAAG	2 cut(s)	1011, 1690
AcvI	CACGTG	1 cut(s)	742
AcyI	GRCGYC	2 cut(s)	42, 382
AdeI	CACNNNGTG	1 cut(s)	1399
AfaI	GTAC	3 cut(s)	1346, 1715, 1939
AfiI	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
AgsI	TTSAA	9 cut(s)	450, 587, 815, 865, 1212, 1518, 1664, 1857, 2117
AjnI	CCWGG	3 cut(s)	320, 604, 1986
AjuI	GAANNNNNNNTTGG	2 cut(s)	1829, 1861
AluBI	AGCT	5 cut(s)	623, 1629, 1921, 2138, 2152
AluI	AGCT	5 cut(s)	623, 1629, 1921, 2138, 2152
Alw21I	GWGCWC	2 cut(s)	365, 473
Alw26I	GTCTC	5 cut(s)	337, 702, 783, 885, 1019
Alw44I	GTGCAC	1 cut(s)	361
AlwI	GGATC	4 cut(s)	538, 1175, 1188, 1817
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	3 cut(s)	736, 744, 940
ApaLI	GTGCAC	1 cut(s)	361
ApeKI	GCWGC	6 cut(s)	12, 554, 1170, 1286, 2138, 2149
ApoI	RAATTY	4 cut(s)	499, 1360, 1513, 2095
ArsI	GACNNNNNNTTYG	2 cut(s)	1727, 1759
Asp700I	GAANNNNTTC	2 cut(s)	1787, 2260
Asp718I	GGTACC	1 cut(s)	1713
AspLEI	GCGC	4 cut(s)	12, 230, 776, 1066
AspS9I	GGNCC	2 cut(s)	324, 941
AsuHPI	GGTGA	5 cut(s)	190, 271, 1535, 1565, 1826
AsuNHI	GCTAGC	1 cut(s)	1625
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	1 cut(s)	324
BaeGI	GKGCMC	1 cut(s)	365
BalI	TGGCCA	1 cut(s)	738
BamHI	GGATCC	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	1713
BanII	GRGCYC	1 cut(s)	248
BbrPI	CACGTG	1 cut(s)	742
BbsI	GAAGAC	3 cut(s)	60, 385, 1743
Bbv12I	GWGCWC	2 cut(s)	365, 473
BbvI	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
BccI	CCATC	6 cut(s)	290, 517, 808, 997, 1333, 1610
BceAI	ACGGC	2 cut(s)	29, 59
BcgI	CGANNNNNNTGC	4 cut(s)	383, 417, 1088, 1122
BciT130I	CCWGG	3 cut(s)	322, 606, 1988
BcoDI	GTCTC	5 cut(s)	337, 702, 783, 885, 1019
BfaI	CTAG	3 cut(s)	804, 1626, 2160
BfmI	CTRYAG	1 cut(s)	1329
BisI	GCNGC	9 cut(s)	13, 154, 231, 252, 555, 1171, 1287, 2139, 2150
BlsI	GCNGC	9 cut(s)	14, 155, 232, 253, 556, 1172, 1288, 2140, 2151
BmcAI	AGTACT	1 cut(s)	1939
Bme1390I	CCNGG	3 cut(s)	322, 606, 1988
Bme18I	GGWCC	1 cut(s)	324
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	2 cut(s)	324, 941
BmiI	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
BmrFI	CCNGG	3 cut(s)	322, 606, 1988
BmrI	ACTGGG	1 cut(s)	880
BmsI	GCATC	4 cut(s)	1172, 1316, 2179, 2278
BmtI	GCTAGC	1 cut(s)	1629
BmuI	ACTGGG	1 cut(s)	880
BpiI	GAAGAC	3 cut(s)	60, 385, 1743
BpmI	CTGGAG	1 cut(s)	304
BsaAI	YACGTR	1 cut(s)	742
BsaBI	GATNNNNATC	2 cut(s)	1306, 1821
BsaHI	GRCGYC	2 cut(s)	42, 382
BsaJI	CCNNGG	2 cut(s)	604, 1200
BsaWI	WCCGGW	2 cut(s)	31, 1269
BsaXI	ACNNNNNCTCC	4 cut(s)	95, 125, 1256, 1286
Bsc4I	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
Bse1I	ACTGG	3 cut(s)	875, 1866, 1889
Bse3DI	GCAATG	2 cut(s)	349, 675
Bse8I	GATNNNNATC	2 cut(s)	1306, 1821
BseBI	CCWGG	3 cut(s)	322, 606, 1988
BseDI	CCNNGG	2 cut(s)	604, 1200
BseGI	GGATG	7 cut(s)	303, 532, 934, 1008, 1210, 2094, 2194
BseJI	GATNNNNATC	2 cut(s)	1306, 1821
BseLI	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
BseMI	GCAATG	2 cut(s)	349, 675
BseMII	CTCAG	6 cut(s)	828, 1379, 1460, 1590, 1931, 1955
BseNI	ACTGG	3 cut(s)	875, 1866, 1889
BseRI	GAGGAG	5 cut(s)	164, 173, 185, 910, 938
BseSI	GKGCMC	1 cut(s)	365
BseXI	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
Bsh1236I	CGCG	3 cut(s)	228, 776, 1257
BshFI	GGCC	3 cut(s)	738, 746, 942
BshNI	GGYRCC	1 cut(s)	1713
BsiHKAI	GWGCWC	2 cut(s)	365, 473
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	2 cut(s)	32, 1270
BslFI	GGGAC	2 cut(s)	247, 1435
BslI	CCNNNNNNNGG	3 cut(s)	874, 1331, 2084
BsmAI	GTCTC	5 cut(s)	337, 702, 783, 885, 1019
BsmBI	CGTCTC	2 cut(s)	337, 783
BsmFI	GGGAC	2 cut(s)	247, 1435
BsmI	GAATGC	2 cut(s)	1700, 2141
BsnI	GGCC	3 cut(s)	738, 746, 942
BsoBI	CYCGRG	1 cut(s)	257
Bsp1286I	GDGCHC	3 cut(s)	248, 365, 473
Bsp143I	GATC	5 cut(s)	390, 543, 931, 1180, 1822
BspANI	GGCC	3 cut(s)	738, 746, 942
BspCNI	CTCAG	6 cut(s)	829, 1378, 1459, 1591, 1930, 1954
BspFNI	CGCG	3 cut(s)	228, 776, 1257
BspHI	TCATGA	3 cut(s)	1585, 1768, 2062
BspLI	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
BspOI	GCTAGC	1 cut(s)	1629
BspPI	GGATC	4 cut(s)	538, 1175, 1188, 1817
BspQI	GCTCTTC	2 cut(s)	354, 411
BspT107I	GGYRCC	1 cut(s)	1713
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	2 cut(s)	349, 675
BsrI	ACTGG	3 cut(s)	875, 1866, 1889
BssECI	CCNNGG	2 cut(s)	604, 1200
BssMI	GATC	5 cut(s)	390, 543, 931, 1180, 1822
BssNI	GRCGYC	2 cut(s)	42, 382
Bst2UI	CCWGG	3 cut(s)	322, 606, 1988
Bst4CI	ACNGT	7 cut(s)	1157, 1238, 1246, 1280, 1397, 1499, 2214
Bst6I	CTCTTC	3 cut(s)	354, 411, 1053
BstACI	GRCGYC	2 cut(s)	42, 382
BstBAI	YACGTR	1 cut(s)	742
BstC8I	GCNNGC	6 cut(s)	340, 621, 682, 1594, 1627, 1843
BstDEI	CTNAG	9 cut(s)	837, 1193, 1365, 1425, 1446, 1544, 1599, 1917, 1941
BstF5I	GGATG	7 cut(s)	303, 532, 934, 1008, 1210, 2094, 2194
BstFNI	CGCG	3 cut(s)	228, 776, 1257
BstHHI	GCGC	4 cut(s)	12, 230, 776, 1066
BstKTI	GATC	5 cut(s)	393, 546, 934, 1183, 1825
BstMAI	GTCTC	5 cut(s)	337, 702, 783, 885, 1019
BstMBI	GATC	5 cut(s)	390, 543, 931, 1180, 1822
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 227, 293, 344, 629, 790, 1292
BstNI	CCWGG	3 cut(s)	322, 606, 1988
BstSCI	CCNGG	3 cut(s)	320, 604, 1986
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	1 cut(s)	365
BstUI	CGCG	3 cut(s)	228, 776, 1257
BstV1I	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
BstV2I	GAAGAC	3 cut(s)	60, 385, 1743
BstX2I	RGATCY	1 cut(s)	1180
BstXI	CCANNNNNNTGG	1 cut(s)	1418
BstYI	RGATCY	1 cut(s)	1180
BsuRI	GGCC	3 cut(s)	738, 746, 942
BtgZI	GCGATG	1 cut(s)	268
BtsCI	GGATG	7 cut(s)	303, 532, 934, 1008, 1210, 2094, 2194
BtsI	GCAGTG	1 cut(s)	2264
BtsIMutI	CAGTG	6 cut(s)	834, 868, 957, 1393, 1596, 2264
Cac8I	GCNNGC	6 cut(s)	340, 621, 682, 1594, 1627, 1843
CciI	TCATGA	3 cut(s)	1585, 1768, 2062
CfoI	GCGC	4 cut(s)	12, 230, 776, 1066
Cfr13I	GGNCC	2 cut(s)	324, 941
CseI	GACGC	4 cut(s)	50, 302, 390, 765
Csp6I	GTAC	3 cut(s)	1345, 1714, 1938
CspCI	CAANNNNNGTGG	2 cut(s)	52, 87
CviQI	GTAC	3 cut(s)	1345, 1714, 1938
DdeI	CTNAG	9 cut(s)	837, 1193, 1365, 1425, 1446, 1544, 1599, 1917, 1941
DpnI	GATC	5 cut(s)	392, 545, 933, 1182, 1824
DpnII	GATC	5 cut(s)	390, 543, 931, 1180, 1822
DraI	TTTAAA	1 cut(s)	1896
DraIII	CACNNNGTG	1 cut(s)	1399
EaeI	YGGCCR	2 cut(s)	736, 744
Eam1104I	CTCTTC	3 cut(s)	354, 411, 1053
EarI	CTCTTC	3 cut(s)	354, 411, 1053
EciI	GGCGGA	3 cut(s)	76, 238, 325
Eco24I	GRGCYC	1 cut(s)	248
Eco47I	GGWCC	1 cut(s)	324
Eco57I	CTGAAG	2 cut(s)	1011, 1690
Eco72I	CACGTG	1 cut(s)	742
Eco88I	CYCGRG	1 cut(s)	257
EcoO109I	RGGNCCY	1 cut(s)	324
EcoRI	GAATTC	1 cut(s)	1513
EcoRII	CCWGG	3 cut(s)	320, 604, 1986
EcoT38I	GRGCYC	1 cut(s)	248
Esp3I	CGTCTC	2 cut(s)	337, 783
FalI	AAGNNNNNCTT	4 cut(s)	1829, 1861, 1988, 2020
FaqI	GGGAC	2 cut(s)	247, 1435
FauI	CCCGC	3 cut(s)	209, 233, 901
Fnu4HI	GCNGC	9 cut(s)	13, 154, 231, 252, 555, 1171, 1287, 2139, 2150
FokI	GGATG	7 cut(s)	290, 539, 941, 1015, 1217, 2101, 2201
FriOI	GRGCYC	1 cut(s)	248
Fsp4HI	GCNGC	9 cut(s)	13, 154, 231, 252, 555, 1171, 1287, 2139, 2150
FspBI	CTAG	3 cut(s)	804, 1626, 2160
GlaI	GCGC	4 cut(s)	11, 229, 775, 1065
GluI	GCNGC	9 cut(s)	13, 154, 231, 252, 555, 1171, 1287, 2139, 2150
GsuI	CTGGAG	1 cut(s)	304
HaeIII	GGCC	3 cut(s)	738, 746, 942
HapII	CCGG	2 cut(s)	32, 1270
HgaI	GACGC	4 cut(s)	50, 302, 390, 765
HhaI	GCGC	4 cut(s)	12, 230, 776, 1066
Hin1I	GRCGYC	2 cut(s)	42, 382
Hin6I	GCGC	4 cut(s)	10, 228, 774, 1064
HinP1I	GCGC	4 cut(s)	10, 228, 774, 1064
HincII	GTYRAC	2 cut(s)	1322, 1735
HindII	GTYRAC	2 cut(s)	1322, 1735
HindIII	AAGCTT	1 cut(s)	621
HpaII	CCGG	2 cut(s)	32, 1270
HphI	GGTGA	5 cut(s)	190, 271, 1535, 1565, 1826
Hpy166II	GTNNAC	6 cut(s)	363, 955, 1153, 1322, 1735, 1871
Hpy188III	TCNNGA	9 cut(s)	353, 1055, 1484, 1586, 1613, 1758, 1769, 1966, 2063
Hpy8I	GTNNAC	6 cut(s)	363, 955, 1153, 1322, 1735, 1871
Hpy99I	CGWCG	4 cut(s)	44, 50, 296, 415
HpyAV	CCTTC	7 cut(s)	169, 984, 1126, 1292, 1544, 1676, 1831
HpyCH4III	ACNGT	7 cut(s)	1157, 1238, 1246, 1280, 1397, 1499, 2214
HpyCH4IV	ACGT	2 cut(s)	741, 2175
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 227, 293, 344, 629, 790, 1292
HpyF3I	CTNAG	9 cut(s)	837, 1193, 1365, 1425, 1446, 1544, 1599, 1917, 1941
HpySE526I	ACGT	2 cut(s)	741, 2175
Hsp92I	GRCGYC	2 cut(s)	42, 382
HspAI	GCGC	4 cut(s)	10, 228, 774, 1064
KpnI	GGTACC	1 cut(s)	1717
Kzo9I	GATC	5 cut(s)	390, 543, 931, 1180, 1822
LguI	GCTCTTC	2 cut(s)	354, 411
LmnI	GCTCC	4 cut(s)	161, 251, 965, 1968
Lsp1109I	GCAGC	6 cut(s)	24, 541, 1157, 1273, 2125, 2161
LweI	GCATC	4 cut(s)	1172, 1316, 2179, 2278
MaeI	CTAG	3 cut(s)	804, 1626, 2160
MaeII	ACGT	2 cut(s)	741, 2175
MaeIII	GTNAC	8 cut(s)	578, 672, 787, 1251, 1379, 1461, 1523, 2208
MalI	GATC	5 cut(s)	392, 545, 933, 1182, 1824
MbiI	CCGCTC	1 cut(s)	156
MboI	GATC	5 cut(s)	390, 543, 931, 1180, 1822
MfeI	CAATTG	2 cut(s)	590, 2276
MflI	RGATCY	1 cut(s)	1180
MhlI	GDGCHC	3 cut(s)	248, 365, 473
MlsI	TGGCCA	1 cut(s)	738
MluNI	TGGCCA	1 cut(s)	738
MlyI	GAGTC	4 cut(s)	104, 269, 848, 1757
MmeI	TCCRAC	4 cut(s)	63, 315, 355, 434
Mox20I	TGGCCA	1 cut(s)	738
MroXI	GAANNNNTTC	2 cut(s)	1787, 2260
MscI	TGGCCA	1 cut(s)	738
MseI	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
MslI	CAYNNNNRTG	1 cut(s)	1386
Msp20I	TGGCCA	1 cut(s)	738
MspA1I	CMGCKG	2 cut(s)	908, 1921
MspI	CCGG	2 cut(s)	32, 1270
MspR9I	CCNGG	3 cut(s)	322, 606, 1988
MunI	CAATTG	2 cut(s)	590, 2276
Mva1269I	GAATGC	2 cut(s)	1700, 2141
MvaI	CCWGG	3 cut(s)	322, 606, 1988
MvnI	CGCG	3 cut(s)	228, 776, 1257
MwoI	GCNNNNNNNGC	7 cut(s)	218, 227, 293, 344, 629, 790, 1292
NdeII	GATC	5 cut(s)	390, 543, 931, 1180, 1822
NheI	GCTAGC	1 cut(s)	1625
NlaIV	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
NmeAIII	GCCGAG	2 cut(s)	760, 1225
NmuCI	GTSAC	5 cut(s)	578, 672, 787, 1379, 1523
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	3 cut(s)	1585, 1768, 2062
PciSI	GCTCTTC	2 cut(s)	354, 411
PcsI	WCGNNNNNNNCGW	3 cut(s)	48, 264, 2181
PctI	GAATGC	2 cut(s)	1700, 2141
PdmI	GAANNNNTTC	2 cut(s)	1787, 2260
PfeI	GAWTC	9 cut(s)	35, 415, 643, 692, 831, 1783, 1817, 1905, 2000
PflFI	GACNNNGTC	1 cut(s)	44
PfoI	TCCNGGA	1 cut(s)	1986
PkrI	GCNGC	9 cut(s)	14, 155, 232, 253, 556, 1172, 1288, 2140, 2151
PleI	GAGTC	4 cut(s)	104, 268, 847, 1756
PmaCI	CACGTG	1 cut(s)	742
PmlI	CACGTG	1 cut(s)	742
PpsI	GAGTC	4 cut(s)	104, 268, 847, 1756
Ppu21I	YACGTR	1 cut(s)	742
PpuMI	RGGWCCY	1 cut(s)	324
PsiI	TTATAA	1 cut(s)	2205
Psp5II	RGGWCCY	1 cut(s)	324
Psp6I	CCWGG	3 cut(s)	320, 604, 1986
PspCI	CACGTG	1 cut(s)	742
PspGI	CCWGG	3 cut(s)	320, 604, 1986
PspN4I	GGNNCC	4 cut(s)	247, 1182, 1715, 1762
PspPI	GGNCC	2 cut(s)	324, 941
PspPPI	RGGWCCY	1 cut(s)	324
PspXI	VCTCGAGB	1 cut(s)	257
PsuI	RGATCY	1 cut(s)	1180
PsyI	GACNNNGTC	1 cut(s)	44
PvuII	CAGCTG	1 cut(s)	1921
RsaI	GTAC	3 cut(s)	1346, 1715, 1939
RsaNI	GTAC	3 cut(s)	1345, 1714, 1938
RseI	CAYNNNNRTG	1 cut(s)	1386
SapI	GCTCTTC	2 cut(s)	354, 411
SaqAI	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
SatI	GCNGC	9 cut(s)	13, 154, 231, 252, 555, 1171, 1287, 2139, 2150
Sau3AI	GATC	5 cut(s)	390, 543, 931, 1180, 1822
Sau96I	GGNCC	2 cut(s)	324, 941
ScaI	AGTACT	1 cut(s)	1939
SchI	GAGTC	4 cut(s)	104, 269, 848, 1757
ScrFI	CCNGG	3 cut(s)	322, 606, 1988
SduI	GDGCHC	3 cut(s)	248, 365, 473
SfaNI	GCATC	4 cut(s)	1172, 1316, 2179, 2278
SfcI	CTRYAG	1 cut(s)	1329
Sfr274I	CTCGAG	1 cut(s)	257
SinI	GGWCC	1 cut(s)	324
SlaI	CTCGAG	1 cut(s)	257
SmiMI	CAYNNNNRTG	1 cut(s)	1386
SmlI	CTYRAG	1 cut(s)	257
SmoI	CTYRAG	1 cut(s)	257
SspI	AATATT	2 cut(s)	446, 1538
SspMI	CTAG	3 cut(s)	804, 1626, 2160
StyD4I	CCNGG	3 cut(s)	320, 604, 1986
TaaI	ACNGT	7 cut(s)	1157, 1238, 1246, 1280, 1397, 1499, 2214
TaiI	ACGT	2 cut(s)	744, 2178
TaqI	TCGA	8 cut(s)	258, 267, 354, 393, 1468, 1656, 1674, 2184
TatI	WGTACW	2 cut(s)	1344, 1937
TauI	GCSGC	3 cut(s)	156, 233, 254
TfiI	GAWTC	9 cut(s)	35, 415, 643, 692, 831, 1783, 1817, 1905, 2000
Tru1I	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
Tru9I	TTAA	6 cut(s)	519, 1037, 1116, 1895, 2016, 2154
TscAI	CASTG	6 cut(s)	841, 875, 957, 1400, 1603, 2271
TseFI	GTSAC	5 cut(s)	578, 672, 787, 1379, 1523
TseI	GCWGC	6 cut(s)	12, 554, 1170, 1286, 2138, 2149
Tsp45I	GTSAC	5 cut(s)	578, 672, 787, 1379, 1523
TspGWI	ACGGA	1 cut(s)	319
TspRI	CASTG	6 cut(s)	841, 875, 957, 1400, 1603, 2271
Tth111I	GACNNNGTC	1 cut(s)	44
VneI	GTGCAC	1 cut(s)	361
VpaK11BI	GGWCC	1 cut(s)	324
XapI	RAATTY	4 cut(s)	499, 1360, 1513, 2095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1799
XhoI	CTCGAG	1 cut(s)	257
XmnI	GAANNNNTTC	2 cut(s)	1787, 2260
XspI	CTAG	3 cut(s)	804, 1626, 2160
ZrmI	AGTACT	1 cut(s)	1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.