Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Forward (+)

11562032 .. 11567475

Gene Structure 5444 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG077900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGAGAGGCGCAGCAAAAGAAAACGGAAACCGGAATCCGACGCCGCCGTCAGTGAAGACACCACCGCCTTCGCCGTCTTACTCTCCGCCCTGTCATCTCAAAACCCCGACTCCCACCGCCCCTTACTCACCAAATGCCTCAACAAACTCCGCCGCTCCTTCCACAGCCCCCTCCTCTCTCTCCTCCCCACTCTCCTCACCCGCACCTCCGCTTCCCTCGCCTCCCGCGCCACCGACATGGTGGGCTCCGCCGCCCTCGAGTCCCTCGACATGAACCGCACCATCGCTTCCGACGCTGACATCATCCATGCCTTGCTCTCCAGGTGCTCCGTCTCCGCCTGCAATGCTCTTCTCGATTTGTGCACTACTTGGGTCGGACGACGCCGTTTGATCGAGTTCTCTGCTCTTCCGACGATTCTATTTCGGTTTCTTCGGGTTCGTAAATATTCAACAATTTCAGTTACTGTGTGCTCTGCCTCTGGGGATAGCAAAGATGTAAACTCTGTTAGTGTAGGATTTAAGATGGATGAAGTTTCTGTGTTGATTCTCAATGCTGCAATTATTCTCATCAATACCTGTGACATTGAACAATTGGATAAAATCCCGGGACACCTATCGCAAGCTTTCTTTGCATTTATGAGGAATCTGTGGGCGAATGTGCGAAATGCAATGTCACTCGCAAGCCCTTTGGATTCTACACCAGGGGGAGACTTGTATATTAGCAACATTAGAGTTGGTCATGTGGCCGAAAGCCTGTTCAGGCTTTCCATTTGTGAGTCTCGGCTCGTCACGCCTTTGCCTTTTCGTGTGGTTGAGAGAGGTGTATTTGGTTTCACTGAGTCGGGTTTTAGAGGTTTTATGTCTAACCACTGGGAGGTATCGCCATTTCTTGTGAGGAGGCTGTCAGCTGGGGTGAAAATTGAGGAGGATGATTTTTTCGGCCCATTATCAGTGAATTTGGTGGGAGCATATCCTTCTTTTCTTTCATCAATCCTTCCAGGGATGGTTTCTTGTCTTCCGATTTCTTCAGACGAGTTAAATATCCTTGCATTTCTGGAAGAGGCGCAGAGCAAATTGGGTTGTCCTCTAATTTACCAGCAGGACATTCGGGTTGTTAAAACGAAAAGCAAGAAGGAGGTGCATTTCTTTGTGGACAGTCTGGCATCTTGCTGCATAAAGGATCCTCATTGTCTTAGTGCCGAGGATGTTTCAAAATGCGAAGAAGCATATAAAGACGGTTATACAGTTGCGTTACGCGGAATGGAGTTCCGGTTTGACAGTATTGCTGCTATTGCAGAAGGATTAGCATCTGTTTTTGGTCAACCATCTGTAGGTGCTAATATGTACTTGACACCACCAAATTCTCAGGGCTTGGCTTGTCACTATGATGACCACTGTGTGTTTGTATGCCAACTTGTTGGGACTAAGAAATGGAGAGTTTCTTCTCAGTCAAATGTTCAGTTACCTCGATTGTATGACCCTCTTGATAGACTACATGGTTCAGAAGTTCAGAATTCAATGGGCGACTGCAAACAATATTTGCTTAGGGAAGGTGATATTTTGTATATCCCCAGAGGTGTTCTTCATGAGGCATGCACTGAGAATGTTAGTCTTGATGGGTCTGCTAGCTGTTCCTTACACATTACACTTGGTATCGAGGTTGAACCTCCTTTCGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

559

Amino Acids

61.5

Weight (kDa)

6.26

Isoelectric Point (pI)

55.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	422 - 543	1.1e-21	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	47
AccBSI	CCGCTC	1 cut(s)	156
AccII	CGCG	2 cut(s)	228, 1257
AclWI	GGATC	2 cut(s)	1175, 1188
AcoI	YGGCCR	1 cut(s)	744
AcsI	RAATTY	3 cut(s)	955, 1360, 1513
AcuI	CTGAAG	1 cut(s)	1011
AcyI	GRCGYC	2 cut(s)	42, 382
AdeI	CACNNNGTG	1 cut(s)	1399
AfaI	GTAC	1 cut(s)	1346
AfiI	CCNNNNNNNGG	2 cut(s)	874, 1331
AgsI	TTSAA	5 cut(s)	450, 587, 1212, 1518, 1664
AjnI	CCWGG	3 cut(s)	320, 700, 997
AluBI	AGCT	3 cut(s)	623, 908, 1629
AluI	AGCT	3 cut(s)	623, 908, 1629
Alw21I	GWGCWC	3 cut(s)	329, 365, 473
Alw26I	GTCTC	3 cut(s)	337, 702, 783
Alw44I	GTGCAC	1 cut(s)	361
AlwI	GGATC	2 cut(s)	1175, 1188
AlwNI	CAGNNNCTG	1 cut(s)	464
Ama87I	CYCGRG	2 cut(s)	257, 604
AoxI	GGCC	2 cut(s)	744, 940
ApaLI	GTGCAC	1 cut(s)	361
ApeKI	GCWGC	4 cut(s)	12, 554, 1170, 1286
ApoI	RAATTY	3 cut(s)	955, 1360, 1513
AspLEI	GCGC	3 cut(s)	12, 230, 1066
AspS9I	GGNCC	1 cut(s)	941
AsuC2I	CCSGG	2 cut(s)	605, 606
AsuHPI	GGTGA	4 cut(s)	121, 190, 925, 1565
AsuNHI	GCTAGC	1 cut(s)	1625
AvaI	CYCGRG	2 cut(s)	257, 604
BaeGI	GKGCMC	1 cut(s)	365
BamHI	GGATCC	1 cut(s)	1180
BanII	GRGCYC	1 cut(s)	248
BbsI	GAAGAC	2 cut(s)	63, 1007
Bbv12I	GWGCWC	3 cut(s)	329, 365, 473
BbvI	GCAGC	4 cut(s)	24, 541, 1157, 1273
BccI	CCATC	5 cut(s)	290, 517, 997, 1333, 1610
BceAI	ACGGC	3 cut(s)	32, 59, 369
BcgI	CGANNNNNNTGC	4 cut(s)	383, 417, 1088, 1122
BciT130I	CCWGG	3 cut(s)	322, 702, 999
BcnI	CCSGG	2 cut(s)	605, 606
BcoDI	GTCTC	3 cut(s)	337, 702, 783
BfaI	CTAG	1 cut(s)	1626
BfmI	CTRYAG	1 cut(s)	1329
BisI	GCNGC	7 cut(s)	13, 45, 154, 252, 555, 1171, 1287
BlsI	GCNGC	7 cut(s)	14, 46, 155, 253, 556, 1172, 1288
Bme1390I	CCNGG	5 cut(s)	322, 605, 606, 702, 999
BmeT110I	CYCGRG	2 cut(s)	257, 604
BmgT120I	GGNCC	1 cut(s)	941
BmiI	GGNNCC	2 cut(s)	247, 1182
BmrFI	CCNGG	5 cut(s)	322, 605, 606, 702, 999
BmrI	ACTGGG	1 cut(s)	880
BmsI	GCATC	2 cut(s)	1172, 1316
BmtI	GCTAGC	1 cut(s)	1629
BmuI	ACTGGG	1 cut(s)	880
BpiI	GAAGAC	2 cut(s)	63, 1007
BpmI	CTGGAG	1 cut(s)	304
Bpu10I	CCTNAGC	1 cut(s)	1544
BpuMI	CCSGG	2 cut(s)	605, 606
BsaBI	GATNNNNATC	1 cut(s)	1306
BsaHI	GRCGYC	2 cut(s)	42, 382
BsaJI	CCNNGG	4 cut(s)	604, 701, 998, 1200
BsaWI	WCCGGW	2 cut(s)	31, 1269
BsaXI	ACNNNNNCTCC	4 cut(s)	95, 125, 1256, 1286
Bsc4I	CCNNNNNNNGG	2 cut(s)	874, 1331
Bse1I	ACTGG	1 cut(s)	875
Bse3DI	GCAATG	2 cut(s)	349, 675
Bse8I	GATNNNNATC	1 cut(s)	1306
BseBI	CCWGG	3 cut(s)	322, 702, 999
BseDI	CCNNGG	4 cut(s)	604, 701, 998, 1200
BseGI	GGATG	5 cut(s)	303, 532, 934, 1008, 1210
BseJI	GATNNNNATC	1 cut(s)	1306
BseLI	CCNNNNNNNGG	2 cut(s)	874, 1331
BseMI	GCAATG	2 cut(s)	349, 675
BseMII	CTCAG	4 cut(s)	828, 1379, 1460, 1590
BseNI	ACTGG	1 cut(s)	875
BseRI	GAGGAG	5 cut(s)	164, 173, 185, 910, 938
BseSI	GKGCMC	1 cut(s)	365
BseXI	GCAGC	4 cut(s)	24, 541, 1157, 1273
BseYI	CCCAGC	1 cut(s)	908
Bsh1236I	CGCG	2 cut(s)	228, 1257
BshFI	GGCC	2 cut(s)	746, 942
BsiHKAI	GWGCWC	3 cut(s)	329, 365, 473
BsiHKCI	CYCGRG	2 cut(s)	257, 604
BsiSI	CCGG	3 cut(s)	32, 605, 1270
BslFI	GGGAC	3 cut(s)	247, 621, 1435
BslI	CCNNNNNNNGG	2 cut(s)	874, 1331
BsmAI	GTCTC	3 cut(s)	337, 702, 783
BsmBI	CGTCTC	1 cut(s)	337
BsmFI	GGGAC	3 cut(s)	247, 621, 1435
BsnI	GGCC	2 cut(s)	746, 942
BsoBI	CYCGRG	2 cut(s)	257, 604
Bsp1286I	GDGCHC	4 cut(s)	248, 329, 365, 473
Bsp143I	GATC	2 cut(s)	390, 1180
BspANI	GGCC	2 cut(s)	746, 942
BspCNI	CTCAG	4 cut(s)	829, 1378, 1459, 1591
BspFNI	CGCG	2 cut(s)	228, 1257
BspHI	TCATGA	1 cut(s)	1585
BspLI	GGNNCC	2 cut(s)	247, 1182
BspOI	GCTAGC	1 cut(s)	1629
BspPI	GGATC	2 cut(s)	1175, 1188
BspQI	GCTCTTC	2 cut(s)	354, 411
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	2 cut(s)	349, 675
BsrI	ACTGG	1 cut(s)	875
BssECI	CCNNGG	4 cut(s)	604, 701, 998, 1200
BssMI	GATC	2 cut(s)	390, 1180
BssNI	GRCGYC	2 cut(s)	42, 382
Bst2UI	CCWGG	3 cut(s)	322, 702, 999
Bst4CI	ACNGT	6 cut(s)	466, 1157, 1238, 1246, 1280, 1397
Bst6I	CTCTTC	3 cut(s)	354, 411, 1053
BstACI	GRCGYC	2 cut(s)	42, 382
BstC8I	GCNNGC	5 cut(s)	340, 621, 682, 1594, 1627
BstDEI	CTNAG	7 cut(s)	837, 1193, 1365, 1425, 1446, 1544, 1599
BstF5I	GGATG	5 cut(s)	303, 532, 934, 1008, 1210
BstFNI	CGCG	2 cut(s)	228, 1257
BstHHI	GCGC	3 cut(s)	12, 230, 1066
BstKTI	GATC	2 cut(s)	393, 1183
BstMAI	GTCTC	3 cut(s)	337, 702, 783
BstMBI	GATC	2 cut(s)	390, 1180
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 227, 293, 344, 629, 790, 1292
BstNI	CCWGG	3 cut(s)	322, 702, 999
BstNSI	RCATGY	1 cut(s)	1596
BstSCI	CCNGG	5 cut(s)	320, 603, 604, 700, 997
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	1 cut(s)	365
BstUI	CGCG	2 cut(s)	228, 1257
BstV1I	GCAGC	4 cut(s)	24, 541, 1157, 1273
BstV2I	GAAGAC	2 cut(s)	63, 1007
BstX2I	RGATCY	1 cut(s)	1180
BstXI	CCANNNNNNTGG	2 cut(s)	238, 1418
BstYI	RGATCY	1 cut(s)	1180
BsuRI	GGCC	2 cut(s)	746, 942
BtgZI	GCGATG	1 cut(s)	268
BtsCI	GGATG	5 cut(s)	303, 532, 934, 1008, 1210
BtsIMutI	CAGTG	6 cut(s)	58, 834, 868, 957, 1393, 1596
Cac8I	GCNNGC	5 cut(s)	340, 621, 682, 1594, 1627
CaiI	CAGNNNCTG	1 cut(s)	464
CciI	TCATGA	1 cut(s)	1585
CfoI	GCGC	3 cut(s)	12, 230, 1066
Cfr13I	GGNCC	1 cut(s)	941
Cfr9I	CCCGGG	1 cut(s)	604
CseI	GACGC	3 cut(s)	50, 302, 390
Csp6I	GTAC	1 cut(s)	1345
CviAII	CATG	7 cut(s)	238, 271, 308, 740, 1496, 1586, 1593
CviQI	GTAC	1 cut(s)	1345
DdeI	CTNAG	7 cut(s)	837, 1193, 1365, 1425, 1446, 1544, 1599
DpnI	GATC	2 cut(s)	392, 1182
DpnII	GATC	2 cut(s)	390, 1180
DraIII	CACNNNGTG	1 cut(s)	1399
DrdI	GACNNNNNNGTC	1 cut(s)	47
DseDI	GACNNNNNNGTC	1 cut(s)	47
EaeI	YGGCCR	1 cut(s)	744
Eam1104I	CTCTTC	3 cut(s)	354, 411, 1053
EarI	CTCTTC	3 cut(s)	354, 411, 1053
EciI	GGCGGA	4 cut(s)	76, 140, 238, 325
Eco24I	GRGCYC	1 cut(s)	248
Eco57I	CTGAAG	1 cut(s)	1011
Eco88I	CYCGRG	2 cut(s)	257, 604
EcoRI	GAATTC	1 cut(s)	1513
EcoRII	CCWGG	3 cut(s)	320, 700, 997
EcoT38I	GRGCYC	1 cut(s)	248
Esp3I	CGTCTC	1 cut(s)	337
FaeI	CATG	7 cut(s)	241, 274, 311, 743, 1499, 1589, 1596
FaqI	GGGAC	3 cut(s)	247, 621, 1435
FatI	CATG	7 cut(s)	237, 270, 307, 739, 1495, 1585, 1592
FauI	CCCGC	2 cut(s)	209, 233
Fnu4HI	GCNGC	7 cut(s)	13, 45, 154, 252, 555, 1171, 1287
FokI	GGATG	5 cut(s)	290, 539, 941, 1015, 1217
FriOI	GRGCYC	1 cut(s)	248
Fsp4HI	GCNGC	7 cut(s)	13, 45, 154, 252, 555, 1171, 1287
FspBI	CTAG	1 cut(s)	1626
GlaI	GCGC	3 cut(s)	11, 229, 1065
GluI	GCNGC	7 cut(s)	13, 45, 154, 252, 555, 1171, 1287
GsaI	CCCAGC	1 cut(s)	912
GsuI	CTGGAG	1 cut(s)	304
HaeIII	GGCC	2 cut(s)	746, 942
HapII	CCGG	3 cut(s)	32, 605, 1270
HgaI	GACGC	3 cut(s)	50, 302, 390
HhaI	GCGC	3 cut(s)	12, 230, 1066
Hin1I	GRCGYC	2 cut(s)	42, 382
Hin1II	CATG	7 cut(s)	241, 274, 311, 743, 1499, 1589, 1596
Hin6I	GCGC	3 cut(s)	10, 228, 1064
HinP1I	GCGC	3 cut(s)	10, 228, 1064
HincII	GTYRAC	1 cut(s)	1322
HindII	GTYRAC	1 cut(s)	1322
HindIII	AAGCTT	1 cut(s)	621
HinfI	GANTC	9 cut(s)	35, 110, 260, 415, 544, 643, 692, 776, 839
HpaII	CCGG	3 cut(s)	32, 605, 1270
HphI	GGTGA	4 cut(s)	121, 190, 925, 1565
Hpy166II	GTNNAC	4 cut(s)	363, 499, 1153, 1322
Hpy188I	TCNGA	8 cut(s)	40, 292, 377, 411, 1020, 1030, 1504, 1512
Hpy188III	TCNNGA	5 cut(s)	353, 1055, 1484, 1586, 1613
Hpy8I	GTNNAC	4 cut(s)	363, 499, 1153, 1322
Hpy99I	CGWCG	4 cut(s)	44, 296, 384, 415
HpyAV	CCTTC	7 cut(s)	79, 169, 984, 1004, 1126, 1292, 1544
HpyCH4III	ACNGT	6 cut(s)	466, 1157, 1238, 1246, 1280, 1397
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 227, 293, 344, 629, 790, 1292
HpyF3I	CTNAG	7 cut(s)	837, 1193, 1365, 1425, 1446, 1544, 1599
Hsp92I	GRCGYC	2 cut(s)	42, 382
Hsp92II	CATG	7 cut(s)	241, 274, 311, 743, 1499, 1589, 1596
HspAI	GCGC	3 cut(s)	10, 228, 1064
Kzo9I	GATC	2 cut(s)	390, 1180
LguI	GCTCTTC	2 cut(s)	354, 411
LmnI	GCTCC	4 cut(s)	161, 251, 332, 965
Lsp1109I	GCAGC	4 cut(s)	24, 541, 1157, 1273
LweI	GCATC	2 cut(s)	1172, 1316
MaeI	CTAG	1 cut(s)	1626
MaeIII	GTNAC	7 cut(s)	460, 578, 672, 787, 1251, 1379, 1461
MalI	GATC	2 cut(s)	392, 1182
MbiI	CCGCTC	1 cut(s)	156
MboI	GATC	2 cut(s)	390, 1180
MfeI	CAATTG	1 cut(s)	590
MflI	RGATCY	1 cut(s)	1180
MhlI	GDGCHC	4 cut(s)	248, 329, 365, 473
MluCI	AATT	9 cut(s)	453, 558, 590, 918, 955, 1073, 1089, 1360, 1513
MlyI	GAGTC	4 cut(s)	104, 269, 785, 848
MmeI	TCCRAC	4 cut(s)	63, 315, 355, 434
MseI	TTAA	3 cut(s)	519, 1037, 1116
MslI	CAYNNNNRTG	2 cut(s)	236, 1386
MspA1I	CMGCKG	1 cut(s)	908
MspI	CCGG	3 cut(s)	32, 605, 1270
MspR9I	CCNGG	5 cut(s)	322, 605, 606, 702, 999
MunI	CAATTG	1 cut(s)	590
MvaI	CCWGG	3 cut(s)	322, 702, 999
MvnI	CGCG	2 cut(s)	228, 1257
MwoI	GCNNNNNNNGC	7 cut(s)	218, 227, 293, 344, 629, 790, 1292
NciI	CCSGG	2 cut(s)	605, 606
NdeII	GATC	2 cut(s)	390, 1180
NheI	GCTAGC	1 cut(s)	1625
NlaIII	CATG	7 cut(s)	241, 274, 311, 743, 1499, 1589, 1596
NlaIV	GGNNCC	2 cut(s)	247, 1182
NmeAIII	GCCGAG	2 cut(s)	760, 1225
NmuCI	GTSAC	4 cut(s)	578, 672, 787, 1379
NspI	RCATGY	1 cut(s)	1596
PaeI	GCATGC	1 cut(s)	1596
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	1 cut(s)	1585
PciSI	GCTCTTC	2 cut(s)	354, 411
PcsI	WCGNNNNNNNCGW	1 cut(s)	264
PfeI	GAWTC	5 cut(s)	35, 415, 544, 643, 692
PkrI	GCNGC	7 cut(s)	14, 46, 155, 253, 556, 1172, 1288
PleI	GAGTC	4 cut(s)	104, 268, 784, 847
PpsI	GAGTC	4 cut(s)	104, 268, 784, 847
Psp6I	CCWGG	3 cut(s)	320, 700, 997
PspFI	CCCAGC	1 cut(s)	908
PspGI	CCWGG	3 cut(s)	320, 700, 997
PspN4I	GGNNCC	2 cut(s)	247, 1182
PspPI	GGNCC	1 cut(s)	941
PspXI	VCTCGAGB	1 cut(s)	257
PstNI	CAGNNNCTG	1 cut(s)	464
PsuI	RGATCY	1 cut(s)	1180
PvuII	CAGCTG	1 cut(s)	908
RsaI	GTAC	1 cut(s)	1346
RsaNI	GTAC	1 cut(s)	1345
RseI	CAYNNNNRTG	2 cut(s)	236, 1386
SapI	GCTCTTC	2 cut(s)	354, 411
SaqAI	TTAA	3 cut(s)	519, 1037, 1116
SatI	GCNGC	7 cut(s)	13, 45, 154, 252, 555, 1171, 1287
Sau3AI	GATC	2 cut(s)	390, 1180
Sau96I	GGNCC	1 cut(s)	941
SchI	GAGTC	4 cut(s)	104, 269, 785, 848
ScrFI	CCNGG	5 cut(s)	322, 605, 606, 702, 999
SduI	GDGCHC	4 cut(s)	248, 329, 365, 473
SfaNI	GCATC	2 cut(s)	1172, 1316
SfcI	CTRYAG	1 cut(s)	1329
Sfr274I	CTCGAG	1 cut(s)	257
SlaI	CTCGAG	1 cut(s)	257
SmaI	CCCGGG	1 cut(s)	606
SmiMI	CAYNNNNRTG	2 cut(s)	236, 1386
SmlI	CTYRAG	1 cut(s)	257
SmoI	CTYRAG	1 cut(s)	257
SphI	GCATGC	1 cut(s)	1596
Sse9I	AATT	9 cut(s)	453, 558, 590, 918, 955, 1073, 1089, 1360, 1513
SspI	AATATT	2 cut(s)	446, 1538
SspMI	CTAG	1 cut(s)	1626
StyD4I	CCNGG	5 cut(s)	320, 603, 604, 700, 997
TaaI	ACNGT	6 cut(s)	466, 1157, 1238, 1246, 1280, 1397
TaqI	TCGA	7 cut(s)	258, 267, 354, 393, 1468, 1656, 1674
TasI	AATT	9 cut(s)	453, 558, 590, 918, 955, 1073, 1089, 1360, 1513
TatI	WGTACW	1 cut(s)	1344
TauI	GCSGC	3 cut(s)	47, 156, 254
TfiI	GAWTC	5 cut(s)	35, 415, 544, 643, 692
Tru1I	TTAA	3 cut(s)	519, 1037, 1116
Tru9I	TTAA	3 cut(s)	519, 1037, 1116
TscAI	CASTG	6 cut(s)	58, 841, 875, 957, 1400, 1603
TseFI	GTSAC	4 cut(s)	578, 672, 787, 1379
TseI	GCWGC	4 cut(s)	12, 554, 1170, 1286
Tsp45I	GTSAC	4 cut(s)	578, 672, 787, 1379
TspDTI	ATGAA	4 cut(s)	287, 543, 975, 1574
TspGWI	ACGGA	2 cut(s)	40, 319
TspMI	CCCGGG	1 cut(s)	604
TspRI	CASTG	6 cut(s)	58, 841, 875, 957, 1400, 1603
VneI	GTGCAC	1 cut(s)	361
XapI	RAATTY	3 cut(s)	955, 1360, 1513
XceI	RCATGY	1 cut(s)	1596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	238
XhoI	CTCGAG	1 cut(s)	257
XmaI	CCCGGG	1 cut(s)	604
XspI	CTAG	1 cut(s)	1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.