Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Forward (+)

18096414 .. 18100392

Gene Structure 3979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG086200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGGTGGGCTCCGCCGCCCTCGAGTCCCTCGACATGAACCGCACCATCGCTTCCGACGCTGACATCATCCATGCCTTGCTCTCCAGGTCCTCCGTCTCCGCCTGCAATGCTCTTCTCGATTTGTGCACTACTTGGTTCGGACGACGCCGTTTGATCGAGTTCTCTGCTCTTCCGACGATTCTATTTCGGTTTCTTCGGGTTCGTAAATATTCGACAATTTCAGTTACTGTGTGCTCTGCCTCTGGGGATAGCAAAGATGTAAACTCTGTTAGTGTAGGATTTAAGATGGATGAAGTTTCTGTGTTGATTCTCAATGCTGCAATTATTCTCATCAATACCTGTGACATTGAGCAATTGGAGAAAATCCCGGGACACCTATCGCAAGCTTTCTTTACATTTATGAGGAATCTGTGGGCGAATGTGCGAAATGCAATGTCACTCGCAAGCCCTTTGGATTCTACACCAGGGGGAGACTTGTATATTAGCAACATTAGAGTTGGTCATGTGGCCGAAAGCCTGTTCAGGCTTTCCATTTGTGCGTCTCGGCTCGTCACGCCTTTGCCTTTTCGTGTGGTTGAGAGAGGTGTATTTGGTTTCACTGAGTCGGGTTTTAGAGGTTTTATGTCTAACCACTGGGAGGTATCGCCATTTCTTGTGAGGAGGCTGTCAGCTGGGGTGAAAATTGAGGAGGATGATTTTTTCGGCCCATTATCAGTGAATTTGGTGGGAGCATATCCTTCTTTTCTTTCATCAATACTTCCAGGGATGGTTTCTTGTCTTCCTATTTCTTCAGATGAGTTAAACATCCTTGCATTTCTGGAAGAGGCGCGGAGCAAATTGGGTTGTCCCCTAATTTACCAGCAGGACATTCGGGTTGTTAAAACGAAAAGCAAGAAGGAGGTGCATTTCTTTGTGGACAGTCTGGCATCTTGCTGCATAAAGGATCCTCATTGTCTTAGTGCCGAGGATGTTTCAAAATGCGAAGAAGCATATAAAGACGGTTATACAGTTGCGTTACGCGGAATGGAGTTCCGGTTTGACAGTGTTGCTGCTATTGCAGAAGGATTAGCATCTGTTTTTGGTCAACCATCTTTAGGTGCTAATATGTACTTGACACCACCAAATTCTCAGGGCTTGGCTTGTCACTATGATGACCACTGTGTGTTTGTATGCCAACTTGTTGGGACTAAGAAATGGAGAGTTTCTTCTCAGTCAAATGTTCAGTTACCTCGATTGTATGACCCTCTTGATAAACTACACGGTTCAGAAGTTCAGAATTCAATGGGTGACTGCAAACAATATTTGCTTAGGGAAGGTGATATTTTGTATATCCCCAGAGGTGTTCTTCATGAGGCATGCACTGAGAATGTTAGTCTTGATGGGTCTGCTAGCTGTTCCTTACACATTACACTTGGTATCGAGGTTGAACCTCCTTTCGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

480

Amino Acids

52.79

Weight (kDa)

5.63

Isoelectric Point (pI)

54.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	343 - 464	1.8e-21	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	829, 1020
AciI	CCGC	6 cut(s)	12, 15, 40, 99, 829, 1020
AclWI	GGATC	2 cut(s)	938, 951
AcoI	YGGCCR	1 cut(s)	507
AcsI	RAATTY	3 cut(s)	718, 1123, 1276
AcuI	CTGAAG	1 cut(s)	774
AcyI	GRCGYC	1 cut(s)	145
AdeI	CACNNNGTG	1 cut(s)	1162
AfaI	GTAC	1 cut(s)	1109
AfiI	CCNNNNNNNGG	2 cut(s)	637, 1094
AgsI	TTSAA	3 cut(s)	975, 1281, 1427
AjnI	CCWGG	3 cut(s)	83, 463, 760
AluBI	AGCT	3 cut(s)	386, 671, 1392
AluI	AGCT	3 cut(s)	386, 671, 1392
Alw21I	GWGCWC	2 cut(s)	128, 236
Alw26I	GTCTC	3 cut(s)	100, 465, 546
Alw44I	GTGCAC	1 cut(s)	124
AlwI	GGATC	2 cut(s)	938, 951
AlwNI	CAGNNNCTG	1 cut(s)	227
Ama87I	CYCGRG	2 cut(s)	20, 367
AoxI	GGCC	2 cut(s)	507, 703
ApaLI	GTGCAC	1 cut(s)	124
ApeKI	GCWGC	3 cut(s)	317, 933, 1049
ApoI	RAATTY	3 cut(s)	718, 1123, 1276
AspLEI	GCGC	1 cut(s)	829
AspS9I	GGNCC	2 cut(s)	87, 704
AsuC2I	CCSGG	2 cut(s)	368, 369
AsuHPI	GGTGA	3 cut(s)	688, 1298, 1328
AsuNHI	GCTAGC	1 cut(s)	1388
AvaI	CYCGRG	2 cut(s)	20, 367
AvaII	GGWCC	1 cut(s)	87
BaeGI	GKGCMC	1 cut(s)	128
BamHI	GGATCC	1 cut(s)	943
BanII	GRGCYC	1 cut(s)	11
BbsI	GAAGAC	1 cut(s)	770
Bbv12I	GWGCWC	2 cut(s)	128, 236
BbvI	GCAGC	3 cut(s)	304, 920, 1036
BccI	CCATC	5 cut(s)	53, 280, 760, 1096, 1373
BceAI	ACGGC	1 cut(s)	132
BcgI	CGANNNNNNTGC	4 cut(s)	146, 180, 851, 885
BciT130I	CCWGG	3 cut(s)	85, 465, 762
BcnI	CCSGG	2 cut(s)	368, 369
BcoDI	GTCTC	3 cut(s)	100, 465, 546
BfaI	CTAG	1 cut(s)	1389
BisI	GCNGC	4 cut(s)	15, 318, 934, 1050
BlsI	GCNGC	4 cut(s)	16, 319, 935, 1051
Bme1390I	CCNGG	5 cut(s)	85, 368, 369, 465, 762
Bme18I	GGWCC	1 cut(s)	87
BmeT110I	CYCGRG	2 cut(s)	20, 367
BmgT120I	GGNCC	2 cut(s)	87, 704
BmiI	GGNNCC	2 cut(s)	10, 945
BmrFI	CCNGG	5 cut(s)	85, 368, 369, 465, 762
BmrI	ACTGGG	1 cut(s)	643
BmsI	GCATC	2 cut(s)	935, 1079
BmtI	GCTAGC	1 cut(s)	1392
BmuI	ACTGGG	1 cut(s)	643
BpiI	GAAGAC	1 cut(s)	770
BpmI	CTGGAG	1 cut(s)	67
Bpu10I	CCTNAGC	1 cut(s)	1307
BpuMI	CCSGG	2 cut(s)	368, 369
BsaBI	GATNNNNATC	1 cut(s)	1069
BsaHI	GRCGYC	1 cut(s)	145
BsaJI	CCNNGG	4 cut(s)	367, 464, 761, 963
BsaWI	WCCGGW	1 cut(s)	1032
BsaXI	ACNNNNNCTCC	2 cut(s)	1019, 1049
Bsc4I	CCNNNNNNNGG	2 cut(s)	637, 1094
Bse1I	ACTGG	1 cut(s)	638
Bse3DI	GCAATG	2 cut(s)	112, 438
Bse8I	GATNNNNATC	1 cut(s)	1069
BseBI	CCWGG	3 cut(s)	85, 465, 762
BseDI	CCNNGG	4 cut(s)	367, 464, 761, 963
BseGI	GGATG	6 cut(s)	66, 295, 697, 771, 804, 973
BseJI	GATNNNNATC	1 cut(s)	1069
BseLI	CCNNNNNNNGG	2 cut(s)	637, 1094
BseMI	GCAATG	2 cut(s)	112, 438
BseMII	CTCAG	4 cut(s)	591, 1142, 1223, 1353
BseNI	ACTGG	1 cut(s)	638
BseRI	GAGGAG	2 cut(s)	673, 701
BseSI	GKGCMC	1 cut(s)	128
BseXI	GCAGC	3 cut(s)	304, 920, 1036
BseYI	CCCAGC	1 cut(s)	671
Bsh1236I	CGCG	2 cut(s)	829, 1020
BshFI	GGCC	2 cut(s)	509, 705
BsiHKAI	GWGCWC	2 cut(s)	128, 236
BsiHKCI	CYCGRG	2 cut(s)	20, 367
BsiSI	CCGG	2 cut(s)	368, 1033
BslFI	GGGAC	4 cut(s)	10, 384, 831, 1198
BslI	CCNNNNNNNGG	2 cut(s)	637, 1094
BsmAI	GTCTC	3 cut(s)	100, 465, 546
BsmBI	CGTCTC	2 cut(s)	100, 546
BsmFI	GGGAC	4 cut(s)	10, 384, 831, 1198
BsnI	GGCC	2 cut(s)	509, 705
BsoBI	CYCGRG	2 cut(s)	20, 367
Bsp1286I	GDGCHC	3 cut(s)	11, 128, 236
Bsp143I	GATC	2 cut(s)	153, 943
BspACI	CCGC	6 cut(s)	12, 15, 40, 99, 829, 1020
BspANI	GGCC	2 cut(s)	509, 705
BspCNI	CTCAG	4 cut(s)	592, 1141, 1222, 1354
BspFNI	CGCG	2 cut(s)	829, 1020
BspHI	TCATGA	1 cut(s)	1348
BspLI	GGNNCC	2 cut(s)	10, 945
BspOI	GCTAGC	1 cut(s)	1392
BspPI	GGATC	2 cut(s)	938, 951
BspQI	GCTCTTC	2 cut(s)	117, 174
BsrDI	GCAATG	2 cut(s)	112, 438
BsrI	ACTGG	1 cut(s)	638
BssECI	CCNNGG	4 cut(s)	367, 464, 761, 963
BssMI	GATC	2 cut(s)	153, 943
BssNI	GRCGYC	1 cut(s)	145
Bst2UI	CCWGG	3 cut(s)	85, 465, 762
Bst4CI	ACNGT	7 cut(s)	229, 920, 1001, 1009, 1043, 1160, 1262
Bst6I	CTCTTC	3 cut(s)	117, 174, 816
BstACI	GRCGYC	1 cut(s)	145
BstC8I	GCNNGC	5 cut(s)	103, 384, 445, 1357, 1390
BstDEI	CTNAG	7 cut(s)	600, 956, 1128, 1188, 1209, 1307, 1362
BstF5I	GGATG	6 cut(s)	66, 295, 697, 771, 804, 973
BstFNI	CGCG	2 cut(s)	829, 1020
BstHHI	GCGC	1 cut(s)	829
BstKTI	GATC	2 cut(s)	156, 946
BstMAI	GTCTC	3 cut(s)	100, 465, 546
BstMBI	GATC	2 cut(s)	153, 943
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 107, 553, 1055
BstNI	CCWGG	3 cut(s)	85, 465, 762
BstNSI	RCATGY	1 cut(s)	1359
BstSCI	CCNGG	5 cut(s)	83, 366, 367, 463, 760
BstSLI	GKGCMC	1 cut(s)	128
BstUI	CGCG	2 cut(s)	829, 1020
BstV1I	GCAGC	3 cut(s)	304, 920, 1036
BstV2I	GAAGAC	1 cut(s)	770
BstX2I	RGATCY	1 cut(s)	943
BstXI	CCANNNNNNTGG	1 cut(s)	1181
BstYI	RGATCY	1 cut(s)	943
BsuRI	GGCC	2 cut(s)	509, 705
BtgZI	GCGATG	1 cut(s)	31
BtsCI	GGATG	6 cut(s)	66, 295, 697, 771, 804, 973
BtsIMutI	CAGTG	6 cut(s)	597, 631, 720, 1048, 1156, 1359
Cac8I	GCNNGC	5 cut(s)	103, 384, 445, 1357, 1390
CaiI	CAGNNNCTG	1 cut(s)	227
CciI	TCATGA	1 cut(s)	1348
CfoI	GCGC	1 cut(s)	829
Cfr13I	GGNCC	2 cut(s)	87, 704
Cfr9I	CCCGGG	1 cut(s)	367
CseI	GACGC	3 cut(s)	65, 153, 528
Csp6I	GTAC	1 cut(s)	1108
CviAII	CATG	5 cut(s)	34, 71, 503, 1349, 1356
CviQI	GTAC	1 cut(s)	1108
DdeI	CTNAG	7 cut(s)	600, 956, 1128, 1188, 1209, 1307, 1362
DpnI	GATC	2 cut(s)	155, 945
DpnII	GATC	2 cut(s)	153, 943
DraIII	CACNNNGTG	1 cut(s)	1162
EaeI	YGGCCR	1 cut(s)	507
Eam1104I	CTCTTC	3 cut(s)	117, 174, 816
EarI	CTCTTC	3 cut(s)	117, 174, 816
EciI	GGCGGA	1 cut(s)	88
Eco24I	GRGCYC	1 cut(s)	11
Eco47I	GGWCC	1 cut(s)	87
Eco57I	CTGAAG	1 cut(s)	774
Eco88I	CYCGRG	2 cut(s)	20, 367
EcoO109I	RGGNCCY	1 cut(s)	87
EcoRI	GAATTC	1 cut(s)	1276
EcoRII	CCWGG	3 cut(s)	83, 463, 760
EcoT38I	GRGCYC	1 cut(s)	11
Esp3I	CGTCTC	2 cut(s)	100, 546
FaeI	CATG	5 cut(s)	37, 74, 506, 1352, 1359
FaqI	GGGAC	4 cut(s)	10, 384, 831, 1198
FatI	CATG	5 cut(s)	33, 70, 502, 1348, 1355
Fnu4HI	GCNGC	4 cut(s)	15, 318, 934, 1050
FokI	GGATG	6 cut(s)	53, 302, 704, 778, 791, 980
FriOI	GRGCYC	1 cut(s)	11
Fsp4HI	GCNGC	4 cut(s)	15, 318, 934, 1050
FspBI	CTAG	1 cut(s)	1389
GlaI	GCGC	1 cut(s)	828
GluI	GCNGC	4 cut(s)	15, 318, 934, 1050
GsaI	CCCAGC	1 cut(s)	675
GsuI	CTGGAG	1 cut(s)	67
HaeIII	GGCC	2 cut(s)	509, 705
HapII	CCGG	2 cut(s)	368, 1033
HgaI	GACGC	3 cut(s)	65, 153, 528
HhaI	GCGC	1 cut(s)	829
Hin1I	GRCGYC	1 cut(s)	145
Hin1II	CATG	5 cut(s)	37, 74, 506, 1352, 1359
Hin6I	GCGC	1 cut(s)	827
HinP1I	GCGC	1 cut(s)	827
HincII	GTYRAC	1 cut(s)	1085
HindII	GTYRAC	1 cut(s)	1085
HindIII	AAGCTT	1 cut(s)	384
HinfI	GANTC	6 cut(s)	23, 178, 307, 406, 455, 602
HpaII	CCGG	2 cut(s)	368, 1033
HphI	GGTGA	3 cut(s)	688, 1298, 1328
Hpy166II	GTNNAC	4 cut(s)	126, 262, 916, 1085
Hpy188I	TCNGA	6 cut(s)	55, 140, 174, 793, 1267, 1275
Hpy188III	TCNNGA	5 cut(s)	116, 818, 1247, 1349, 1376
Hpy8I	GTNNAC	4 cut(s)	126, 262, 916, 1085
Hpy99I	CGWCG	3 cut(s)	59, 147, 178
HpyAV	CCTTC	4 cut(s)	747, 889, 1055, 1307
HpyCH4III	ACNGT	7 cut(s)	229, 920, 1001, 1009, 1043, 1160, 1262
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 107, 553, 1055
HpyF3I	CTNAG	7 cut(s)	600, 956, 1128, 1188, 1209, 1307, 1362
Hsp92I	GRCGYC	1 cut(s)	145
Hsp92II	CATG	5 cut(s)	37, 74, 506, 1352, 1359
HspAI	GCGC	1 cut(s)	827
Kzo9I	GATC	2 cut(s)	153, 943
LguI	GCTCTTC	2 cut(s)	117, 174
LmnI	GCTCC	3 cut(s)	14, 728, 831
Lsp1109I	GCAGC	3 cut(s)	304, 920, 1036
LweI	GCATC	2 cut(s)	935, 1079
MaeI	CTAG	1 cut(s)	1389
MaeIII	GTNAC	8 cut(s)	223, 341, 435, 550, 1014, 1142, 1224, 1286
MalI	GATC	2 cut(s)	155, 945
MboI	GATC	2 cut(s)	153, 943
MboII	GAAGA	9 cut(s)	104, 161, 185, 770, 780, 833, 995, 1197, 1337
MfeI	CAATTG	1 cut(s)	353
MflI	RGATCY	1 cut(s)	943
MhlI	GDGCHC	3 cut(s)	11, 128, 236
MluCI	AATT	9 cut(s)	216, 321, 353, 681, 718, 836, 852, 1123, 1276
MlyI	GAGTC	2 cut(s)	32, 611
MmeI	TCCRAC	2 cut(s)	78, 197
MseI	TTAA	3 cut(s)	282, 800, 879
MslI	CAYNNNNRTG	1 cut(s)	1149
MspA1I	CMGCKG	1 cut(s)	671
MspI	CCGG	2 cut(s)	368, 1033
MspR9I	CCNGG	5 cut(s)	85, 368, 369, 465, 762
MunI	CAATTG	1 cut(s)	353
MvaI	CCWGG	3 cut(s)	85, 465, 762
MvnI	CGCG	2 cut(s)	829, 1020
MwoI	GCNNNNNNNGC	4 cut(s)	56, 107, 553, 1055
NciI	CCSGG	2 cut(s)	368, 369
NdeII	GATC	2 cut(s)	153, 943
NheI	GCTAGC	1 cut(s)	1388
NlaIII	CATG	5 cut(s)	37, 74, 506, 1352, 1359
NlaIV	GGNNCC	2 cut(s)	10, 945
NmeAIII	GCCGAG	2 cut(s)	523, 988
NmuCI	GTSAC	5 cut(s)	341, 435, 550, 1142, 1286
NspI	RCATGY	1 cut(s)	1359
PaeI	GCATGC	1 cut(s)	1359
PaeR7I	CTCGAG	1 cut(s)	20
PagI	TCATGA	1 cut(s)	1348
PciSI	GCTCTTC	2 cut(s)	117, 174
PcsI	WCGNNNNNNNCGW	1 cut(s)	27
PfeI	GAWTC	4 cut(s)	178, 307, 406, 455
PkrI	GCNGC	4 cut(s)	16, 319, 935, 1051
PleI	GAGTC	2 cut(s)	31, 610
PpsI	GAGTC	2 cut(s)	31, 610
PpuMI	RGGWCCY	1 cut(s)	87
Psp5II	RGGWCCY	1 cut(s)	87
Psp6I	CCWGG	3 cut(s)	83, 463, 760
PspFI	CCCAGC	1 cut(s)	671
PspGI	CCWGG	3 cut(s)	83, 463, 760
PspN4I	GGNNCC	2 cut(s)	10, 945
PspPI	GGNCC	2 cut(s)	87, 704
PspPPI	RGGWCCY	1 cut(s)	87
PspXI	VCTCGAGB	1 cut(s)	20
PstNI	CAGNNNCTG	1 cut(s)	227
PsuI	RGATCY	1 cut(s)	943
PvuII	CAGCTG	1 cut(s)	671
RsaI	GTAC	1 cut(s)	1109
RsaNI	GTAC	1 cut(s)	1108
RseI	CAYNNNNRTG	1 cut(s)	1149
SapI	GCTCTTC	2 cut(s)	117, 174
SaqAI	TTAA	3 cut(s)	282, 800, 879
SatI	GCNGC	4 cut(s)	15, 318, 934, 1050
Sau3AI	GATC	2 cut(s)	153, 943
Sau96I	GGNCC	2 cut(s)	87, 704
SchI	GAGTC	2 cut(s)	32, 611
ScrFI	CCNGG	5 cut(s)	85, 368, 369, 465, 762
SduI	GDGCHC	3 cut(s)	11, 128, 236
SfaNI	GCATC	2 cut(s)	935, 1079
Sfr274I	CTCGAG	1 cut(s)	20
SinI	GGWCC	1 cut(s)	87
SlaI	CTCGAG	1 cut(s)	20
SmaI	CCCGGG	1 cut(s)	369
SmiMI	CAYNNNNRTG	1 cut(s)	1149
SmlI	CTYRAG	1 cut(s)	20
SmoI	CTYRAG	1 cut(s)	20
SphI	GCATGC	1 cut(s)	1359
Sse9I	AATT	9 cut(s)	216, 321, 353, 681, 718, 836, 852, 1123, 1276
SsiI	CCGC	6 cut(s)	12, 15, 40, 99, 829, 1020
SspI	AATATT	2 cut(s)	209, 1301
SspMI	CTAG	1 cut(s)	1389
StyD4I	CCNGG	5 cut(s)	83, 366, 367, 463, 760
TaaI	ACNGT	7 cut(s)	229, 920, 1001, 1009, 1043, 1160, 1262
TaqI	TCGA	8 cut(s)	21, 30, 117, 156, 212, 1231, 1419, 1437
TasI	AATT	9 cut(s)	216, 321, 353, 681, 718, 836, 852, 1123, 1276
TatI	WGTACW	1 cut(s)	1107
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	4 cut(s)	178, 307, 406, 455
Tru1I	TTAA	3 cut(s)	282, 800, 879
Tru9I	TTAA	3 cut(s)	282, 800, 879
TscAI	CASTG	6 cut(s)	604, 638, 720, 1048, 1163, 1366
TseFI	GTSAC	5 cut(s)	341, 435, 550, 1142, 1286
TseI	GCWGC	3 cut(s)	317, 933, 1049
Tsp45I	GTSAC	5 cut(s)	341, 435, 550, 1142, 1286
TspDTI	ATGAA	4 cut(s)	50, 306, 738, 1337
TspGWI	ACGGA	1 cut(s)	82
TspMI	CCCGGG	1 cut(s)	367
TspRI	CASTG	6 cut(s)	604, 638, 720, 1048, 1163, 1366
VneI	GTGCAC	1 cut(s)	124
VpaK11BI	GGWCC	1 cut(s)	87
XapI	RAATTY	3 cut(s)	718, 1123, 1276
XceI	RCATGY	1 cut(s)	1359
XhoI	CTCGAG	1 cut(s)	20
XmaI	CCCGGG	1 cut(s)	367
XspI	CTAG	1 cut(s)	1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.