Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24225 |
| fragaria_vesca | FvH4_4g06620 |
| prunus_persica | Prupe.1G068700_v2.0.a1 |
| pyrus_communis | pycom16g20270 |
| rosa_chinensis | RchiOBHm_Chr4g0398531 |
| rosa_laevigata | RLG00000009347 |
| rosa_rugosa | Rorug04G0008900 |
| rosa_samantha | Rh4DG078500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 219, 234 |
| AgsI | TTSAA | 2 cut(s) | 60, 154 |
| AluBI | AGCT | 2 cut(s) | 84, 140 |
| AluI | AGCT | 2 cut(s) | 84, 140 |
| ApeKI | GCWGC | 1 cut(s) | 137 |
| AspS9I | GGNCC | 1 cut(s) | 263 |
| AsuC2I | CCSGG | 2 cut(s) | 116, 229 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| AvaII | GGWCC | 1 cut(s) | 263 |
| BbvI | GCAGC | 1 cut(s) | 149 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 256 |
| BclI | TGATCA | 1 cut(s) | 100 |
| BcnI | CCSGG | 2 cut(s) | 116, 229 |
| BisI | GCNGC | 3 cut(s) | 138, 220, 235 |
| BlsI | GCNGC | 3 cut(s) | 139, 221, 236 |
| Bme1390I | CCNGG | 2 cut(s) | 116, 229 |
| Bme18I | GGWCC | 1 cut(s) | 263 |
| BmgT120I | GGNCC | 1 cut(s) | 263 |
| BmrFI | CCNGG | 2 cut(s) | 116, 229 |
| BpuMI | CCSGG | 2 cut(s) | 116, 229 |
| BsaJI | CCNNGG | 1 cut(s) | 228 |
| Bse118I | RCCGGY | 1 cut(s) | 168 |
| Bse1I | ACTGG | 1 cut(s) | 265 |
| BseDI | CCNNGG | 1 cut(s) | 228 |
| BseMII | CTCAG | 1 cut(s) | 6 |
| BseNI | ACTGG | 1 cut(s) | 265 |
| BseXI | GCAGC | 1 cut(s) | 149 |
| BsiSI | CCGG | 3 cut(s) | 115, 169, 228 |
| Bsp143I | GATC | 2 cut(s) | 77, 100 |
| BspACI | CCGC | 2 cut(s) | 219, 234 |
| BspCNI | CTCAG | 1 cut(s) | 7 |
| BsrFI | RCCGGY | 1 cut(s) | 168 |
| BsrI | ACTGG | 1 cut(s) | 265 |
| BssAI | RCCGGY | 1 cut(s) | 168 |
| BssECI | CCNNGG | 1 cut(s) | 228 |
| BssMI | GATC | 2 cut(s) | 77, 100 |
| Bst4CI | ACNGT | 3 cut(s) | 127, 164, 211 |
| BstC8I | GCNNGC | 2 cut(s) | 52, 217 |
| BstDEI | CTNAG | 1 cut(s) | 15 |
| BstEII | GGTNACC | 1 cut(s) | 164 |
| BstKTI | GATC | 2 cut(s) | 80, 103 |
| BstMBI | GATC | 2 cut(s) | 77, 100 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 240 |
| BstPI | GGTNACC | 1 cut(s) | 164 |
| BstSCI | CCNGG | 2 cut(s) | 114, 227 |
| BstV1I | GCAGC | 1 cut(s) | 149 |
| Cac8I | GCNNGC | 2 cut(s) | 52, 217 |
| Cfr10I | RCCGGY | 1 cut(s) | 168 |
| Cfr13I | GGNCC | 1 cut(s) | 263 |
| CviJI | RGCY | 5 cut(s) | 20, 50, 84, 140, 172 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 50, 84, 140, 172 |
| DdeI | CTNAG | 1 cut(s) | 15 |
| DpnI | GATC | 2 cut(s) | 79, 102 |
| DpnII | GATC | 2 cut(s) | 77, 100 |
| Eco47I | GGWCC | 1 cut(s) | 263 |
| Eco91I | GGTNACC | 1 cut(s) | 164 |
| EcoO65I | GGTNACC | 1 cut(s) | 164 |
| FaiI | YATR | 2 cut(s) | 47, 279 |
| FbaI | TGATCA | 1 cut(s) | 100 |
| Fnu4HI | GCNGC | 3 cut(s) | 138, 220, 235 |
| Fsp4HI | GCNGC | 3 cut(s) | 138, 220, 235 |
| GluI | GCNGC | 3 cut(s) | 138, 220, 235 |
| HapII | CCGG | 3 cut(s) | 115, 169, 228 |
| HindIII | AAGCTT | 1 cut(s) | 82 |
| HinfI | GANTC | 1 cut(s) | 268 |
| HpaII | CCGG | 3 cut(s) | 115, 169, 228 |
| HphI | GGTGA | 1 cut(s) | 101 |
| Hpy188I | TCNGA | 1 cut(s) | 267 |
| Hpy188III | TCNNGA | 1 cut(s) | 98 |
| Hpy99I | CGWCG | 1 cut(s) | 215 |
| HpyCH4III | ACNGT | 3 cut(s) | 127, 164, 211 |
| HpyCH4V | TGCA | 3 cut(s) | 54, 74, 277 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 240 |
| HpyF3I | CTNAG | 1 cut(s) | 15 |
| Ksp22I | TGATCA | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 77, 100 |
| LmnI | GCTCC | 1 cut(s) | 144 |
| LpnPI | CCDG | 6 cut(s) | 128, 182, 201, 241, 246, 268 |
| Lsp1109I | GCAGC | 1 cut(s) | 149 |
| MaeIII | GTNAC | 2 cut(s) | 107, 164 |
| MalI | GATC | 2 cut(s) | 79, 102 |
| MboI | GATC | 2 cut(s) | 77, 100 |
| MmeI | TCCRAC | 2 cut(s) | 183, 281 |
| MnlI | CCTC | 2 cut(s) | 10, 105 |
| MseI | TTAA | 1 cut(s) | 11 |
| MspI | CCGG | 3 cut(s) | 115, 169, 228 |
| MspR9I | CCNGG | 2 cut(s) | 116, 229 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 240 |
| NciI | CCSGG | 2 cut(s) | 116, 229 |
| NdeII | GATC | 2 cut(s) | 77, 100 |
| NmuCI | GTSAC | 1 cut(s) | 107 |
| PfeI | GAWTC | 1 cut(s) | 268 |
| PkrI | GCNGC | 3 cut(s) | 139, 221, 236 |
| PspEI | GGTNACC | 1 cut(s) | 164 |
| PspPI | GGNCC | 1 cut(s) | 263 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| SatI | GCNGC | 3 cut(s) | 138, 220, 235 |
| Sau3AI | GATC | 2 cut(s) | 77, 100 |
| Sau96I | GGNCC | 1 cut(s) | 263 |
| ScrFI | CCNGG | 2 cut(s) | 116, 229 |
| SetI | ASST | 3 cut(s) | 86, 142, 287 |
| SinI | GGWCC | 1 cut(s) | 263 |
| SsiI | CCGC | 2 cut(s) | 219, 234 |
| StyD4I | CCNGG | 2 cut(s) | 114, 227 |
| TaaI | ACNGT | 3 cut(s) | 127, 164, 211 |
| TaqI | TCGA | 2 cut(s) | 177, 200 |
| TauI | GCSGC | 2 cut(s) | 222, 237 |
| TfiI | GAWTC | 1 cut(s) | 268 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TseFI | GTSAC | 1 cut(s) | 107 |
| TseI | GCWGC | 1 cut(s) | 137 |
| Tsp45I | GTSAC | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 263 |