Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24225 |
| fragaria_vesca | FvH4_4g06620 |
| prunus_persica | Prupe.1G068700_v2.0.a1 |
| pyrus_communis | pycom16g20270 |
| rosa_chinensis | RchiOBHm_Chr4g0398531 |
| rosa_laevigata | RLG00000009347 |
| rosa_rugosa | Rorug04G0008900 |
| rosa_samantha | Rh4DG078500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 207 |
| AcsI | RAATTY | 1 cut(s) | 194 |
| AgeI | ACCGGT | 1 cut(s) | 165 |
| AgsI | TTSAA | 1 cut(s) | 151 |
| AluBI | AGCT | 2 cut(s) | 81, 137 |
| AluI | AGCT | 2 cut(s) | 81, 137 |
| ApeKI | GCWGC | 1 cut(s) | 134 |
| ApoI | RAATTY | 1 cut(s) | 194 |
| AsiGI | ACCGGT | 1 cut(s) | 165 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 146 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 245 |
| BbvI | GCAGC | 1 cut(s) | 146 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 238 |
| BclI | TGATCA | 1 cut(s) | 97 |
| BisI | GCNGC | 1 cut(s) | 135 |
| BlsI | GCNGC | 1 cut(s) | 136 |
| Bme18I | GGWCC | 1 cut(s) | 245 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BsaBI | GATNNNNATC | 1 cut(s) | 102 |
| BsaWI | WCCGGW | 1 cut(s) | 165 |
| Bse118I | RCCGGY | 1 cut(s) | 165 |
| Bse1I | ACTGG | 1 cut(s) | 247 |
| Bse8I | GATNNNNATC | 1 cut(s) | 102 |
| BseJI | GATNNNNATC | 1 cut(s) | 102 |
| BseNI | ACTGG | 1 cut(s) | 247 |
| BseXI | GCAGC | 1 cut(s) | 146 |
| BshTI | ACCGGT | 1 cut(s) | 165 |
| BsiSI | CCGG | 2 cut(s) | 166, 216 |
| Bsp143I | GATC | 2 cut(s) | 74, 97 |
| BspACI | CCGC | 1 cut(s) | 207 |
| BspCNI | CTCAG | 1 cut(s) | 4 |
| BsrFI | RCCGGY | 1 cut(s) | 165 |
| BsrI | ACTGG | 1 cut(s) | 247 |
| BssAI | RCCGGY | 1 cut(s) | 165 |
| BssMI | GATC | 2 cut(s) | 74, 97 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| BstC8I | GCNNGC | 1 cut(s) | 49 |
| BstDEI | CTNAG | 1 cut(s) | 12 |
| BstKTI | GATC | 2 cut(s) | 77, 100 |
| BstMBI | GATC | 2 cut(s) | 74, 97 |
| BstV1I | GCAGC | 1 cut(s) | 146 |
| BtsIMutI | CAGTG | 1 cut(s) | 240 |
| Cac8I | GCNNGC | 1 cut(s) | 49 |
| Cfr10I | RCCGGY | 1 cut(s) | 165 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| CspAI | ACCGGT | 1 cut(s) | 165 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviJI | RGCY | 3 cut(s) | 47, 81, 137 |
| CviKI_1 | RGCY | 3 cut(s) | 47, 81, 137 |
| DdeI | CTNAG | 1 cut(s) | 12 |
| DpnI | GATC | 2 cut(s) | 76, 99 |
| DpnII | GATC | 2 cut(s) | 74, 97 |
| Eco47I | GGWCC | 1 cut(s) | 245 |
| FaeI | CATG | 1 cut(s) | 116 |
| FaiI | YATR | 3 cut(s) | 44, 114, 261 |
| FatI | CATG | 1 cut(s) | 112 |
| FbaI | TGATCA | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 1 cut(s) | 135 |
| Fsp4HI | GCNGC | 1 cut(s) | 135 |
| GluI | GCNGC | 1 cut(s) | 135 |
| HapII | CCGG | 2 cut(s) | 166, 216 |
| Hin1II | CATG | 1 cut(s) | 116 |
| HinfI | GANTC | 1 cut(s) | 250 |
| HpaII | CCGG | 2 cut(s) | 166, 216 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy188I | TCNGA | 1 cut(s) | 249 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 71, 259 |
| HpyF3I | CTNAG | 1 cut(s) | 12 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| Ksp22I | TGATCA | 1 cut(s) | 97 |
| Kzo9I | GATC | 2 cut(s) | 74, 97 |
| LpnPI | CCDG | 4 cut(s) | 179, 228, 229, 250 |
| Lsp1109I | GCAGC | 1 cut(s) | 146 |
| MaeIII | GTNAC | 1 cut(s) | 52 |
| MalI | GATC | 2 cut(s) | 76, 99 |
| MboI | GATC | 2 cut(s) | 74, 97 |
| MboII | GAAGA | 1 cut(s) | 175 |
| MluCI | AATT | 1 cut(s) | 194 |
| MmeI | TCCRAC | 1 cut(s) | 180 |
| MnlI | CCTC | 3 cut(s) | 7, 102, 223 |
| MroXI | GAANNNNTTC | 1 cut(s) | 146 |
| MseI | TTAA | 2 cut(s) | 8, 198 |
| MslI | CAYNNNNRTG | 1 cut(s) | 111 |
| MspI | CCGG | 2 cut(s) | 166, 216 |
| NdeII | GATC | 2 cut(s) | 74, 97 |
| NlaIII | CATG | 1 cut(s) | 116 |
| PdmI | GAANNNNTTC | 1 cut(s) | 146 |
| PfeI | GAWTC | 1 cut(s) | 250 |
| PinAI | ACCGGT | 1 cut(s) | 165 |
| PkrI | GCNGC | 1 cut(s) | 136 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| RseI | CAYNNNNRTG | 1 cut(s) | 111 |
| SaqAI | TTAA | 2 cut(s) | 8, 198 |
| SatI | GCNGC | 1 cut(s) | 135 |
| Sau3AI | GATC | 2 cut(s) | 74, 97 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| SetI | ASST | 5 cut(s) | 18, 83, 139, 215, 269 |
| SinI | GGWCC | 1 cut(s) | 245 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 111 |
| Sse9I | AATT | 1 cut(s) | 194 |
| SsiI | CCGC | 1 cut(s) | 207 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TaqI | TCGA | 3 cut(s) | 77, 174, 191 |
| TasI | AATT | 1 cut(s) | 194 |
| TfiI | GAWTC | 1 cut(s) | 250 |
| Tru1I | TTAA | 2 cut(s) | 8, 198 |
| Tru9I | TTAA | 2 cut(s) | 8, 198 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TseI | GCWGC | 1 cut(s) | 134 |
| TspDTI | ATGAA | 1 cut(s) | 129 |
| TspGWI | ACGGA | 2 cut(s) | 174, 243 |
| TspRI | CASTG | 1 cut(s) | 247 |
| VpaK11BI | GGWCC | 1 cut(s) | 245 |
| XapI | RAATTY | 1 cut(s) | 194 |
| XmnI | GAANNNNTTC | 1 cut(s) | 146 |