Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24225 |
| fragaria_vesca | FvH4_4g06620 |
| prunus_persica | Prupe.1G068700_v2.0.a1 |
| pyrus_communis | pycom16g20270 |
| rosa_chinensis | RchiOBHm_Chr4g0398531 |
| rosa_laevigata | RLG00000009347 |
| rosa_rugosa | Rorug04G0008900 |
| rosa_samantha | Rh4DG078500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 210 |
| AgsI | TTSAA | 1 cut(s) | 72 |
| AluBI | AGCT | 3 cut(s) | 68, 81, 179 |
| AluI | AGCT | 3 cut(s) | 68, 81, 179 |
| ApeKI | GCWGC | 3 cut(s) | 65, 173, 176 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 22, 54 |
| AspS9I | GGNCC | 1 cut(s) | 281 |
| AsuHPI | GGTGA | 2 cut(s) | 101, 145 |
| AvaII | GGWCC | 1 cut(s) | 281 |
| BaeGI | GKGCMC | 1 cut(s) | 213 |
| BanI | GGYRCC | 1 cut(s) | 210 |
| BanII | GRGCYC | 1 cut(s) | 143 |
| BbvI | GCAGC | 3 cut(s) | 77, 185, 188 |
| BccI | CCATC | 2 cut(s) | 120, 130 |
| BclI | TGATCA | 2 cut(s) | 100, 106 |
| BfaI | CTAG | 1 cut(s) | 78 |
| BisI | GCNGC | 3 cut(s) | 66, 174, 177 |
| BlsI | GCNGC | 3 cut(s) | 67, 175, 178 |
| Bme18I | GGWCC | 1 cut(s) | 281 |
| BmgT120I | GGNCC | 1 cut(s) | 281 |
| BmiI | GGNNCC | 1 cut(s) | 212 |
| BsaBI | GATNNNNATC | 2 cut(s) | 105, 111 |
| BsaJI | CCNNGG | 2 cut(s) | 33, 204 |
| Bse1I | ACTGG | 1 cut(s) | 214 |
| Bse8I | GATNNNNATC | 2 cut(s) | 105, 111 |
| BseDI | CCNNGG | 2 cut(s) | 33, 204 |
| BseJI | GATNNNNATC | 2 cut(s) | 105, 111 |
| BseMII | CTCAG | 1 cut(s) | 267 |
| BseNI | ACTGG | 1 cut(s) | 214 |
| BseSI | GKGCMC | 1 cut(s) | 213 |
| BseXI | GCAGC | 3 cut(s) | 77, 185, 188 |
| BshNI | GGYRCC | 1 cut(s) | 210 |
| Bsp1286I | GDGCHC | 2 cut(s) | 143, 213 |
| Bsp143I | GATC | 3 cut(s) | 53, 100, 106 |
| BspCNI | CTCAG | 2 cut(s) | 4, 266 |
| BspHI | TCATGA | 2 cut(s) | 103, 220 |
| BspLI | GGNNCC | 1 cut(s) | 212 |
| BspT107I | GGYRCC | 1 cut(s) | 210 |
| BsrI | ACTGG | 1 cut(s) | 214 |
| BssECI | CCNNGG | 2 cut(s) | 33, 204 |
| BssMI | GATC | 3 cut(s) | 53, 100, 106 |
| BssT1I | CCWWGG | 2 cut(s) | 33, 204 |
| Bst4CI | ACNGT | 1 cut(s) | 133 |
| Bst6I | CTCTTC | 1 cut(s) | 151 |
| BstDEI | CTNAG | 3 cut(s) | 12, 240, 253 |
| BstKTI | GATC | 3 cut(s) | 56, 103, 109 |
| BstMBI | GATC | 3 cut(s) | 53, 100, 106 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstSLI | GKGCMC | 1 cut(s) | 213 |
| BstV1I | GCAGC | 3 cut(s) | 77, 185, 188 |
| CciI | TCATGA | 2 cut(s) | 103, 220 |
| Cfr13I | GGNCC | 1 cut(s) | 281 |
| CviAII | CATG | 2 cut(s) | 104, 221 |
| CviJI | RGCY | 5 cut(s) | 44, 68, 81, 141, 179 |
| CviKI_1 | RGCY | 5 cut(s) | 44, 68, 81, 141, 179 |
| DdeI | CTNAG | 3 cut(s) | 12, 240, 253 |
| DpnI | GATC | 3 cut(s) | 55, 102, 108 |
| DpnII | GATC | 3 cut(s) | 53, 100, 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 151 |
| EarI | CTCTTC | 1 cut(s) | 151 |
| Eco130I | CCWWGG | 2 cut(s) | 33, 204 |
| Eco24I | GRGCYC | 1 cut(s) | 143 |
| Eco47I | GGWCC | 1 cut(s) | 281 |
| EcoO109I | RGGNCCY | 1 cut(s) | 281 |
| EcoT14I | CCWWGG | 2 cut(s) | 33, 204 |
| EcoT38I | GRGCYC | 1 cut(s) | 143 |
| ErhI | CCWWGG | 2 cut(s) | 33, 204 |
| FaeI | CATG | 2 cut(s) | 107, 224 |
| FaiI | YATR | 3 cut(s) | 105, 222, 297 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 65, 97 |
| FatI | CATG | 2 cut(s) | 103, 220 |
| FbaI | TGATCA | 2 cut(s) | 100, 106 |
| Fnu4HI | GCNGC | 3 cut(s) | 66, 174, 177 |
| FriOI | GRGCYC | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 3 cut(s) | 66, 174, 177 |
| FspBI | CTAG | 1 cut(s) | 78 |
| GluI | GCNGC | 3 cut(s) | 66, 174, 177 |
| Hin1II | CATG | 2 cut(s) | 107, 224 |
| HincII | GTYRAC | 1 cut(s) | 30 |
| HindII | GTYRAC | 1 cut(s) | 30 |
| HinfI | GANTC | 1 cut(s) | 6 |
| HphI | GGTGA | 2 cut(s) | 101, 145 |
| Hpy166II | GTNNAC | 1 cut(s) | 30 |
| Hpy188I | TCNGA | 3 cut(s) | 53, 188, 256 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 116, 221 |
| Hpy8I | GTNNAC | 1 cut(s) | 30 |
| HpyCH4III | ACNGT | 1 cut(s) | 133 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 65, 198 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| HpyF3I | CTNAG | 3 cut(s) | 12, 240, 253 |
| Hsp92II | CATG | 2 cut(s) | 107, 224 |
| Ksp22I | TGATCA | 2 cut(s) | 100, 106 |
| Kzo9I | GATC | 3 cut(s) | 53, 100, 106 |
| LpnPI | CCDG | 2 cut(s) | 227, 264 |
| Lsp1109I | GCAGC | 3 cut(s) | 77, 185, 188 |
| MaeI | CTAG | 1 cut(s) | 78 |
| MalI | GATC | 3 cut(s) | 55, 102, 108 |
| MboI | GATC | 3 cut(s) | 53, 100, 106 |
| MboII | GAAGA | 2 cut(s) | 76, 168 |
| MhlI | GDGCHC | 2 cut(s) | 143, 213 |
| MluCI | AATT | 1 cut(s) | 181 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 4 cut(s) | 98, 102, 161, 262 |
| MslI | CAYNNNNRTG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NdeII | GATC | 3 cut(s) | 53, 100, 106 |
| NlaIII | CATG | 2 cut(s) | 107, 224 |
| NlaIV | GGNNCC | 1 cut(s) | 212 |
| PagI | TCATGA | 2 cut(s) | 103, 220 |
| PkrI | GCNGC | 3 cut(s) | 67, 175, 178 |
| PpuMI | RGGWCCY | 1 cut(s) | 281 |
| Psp5II | RGGWCCY | 1 cut(s) | 281 |
| PspN4I | GGNNCC | 1 cut(s) | 212 |
| PspPI | GGNCC | 1 cut(s) | 281 |
| PspPPI | RGGWCCY | 1 cut(s) | 281 |
| RseI | CAYNNNNRTG | 1 cut(s) | 117 |
| SatI | GCNGC | 3 cut(s) | 66, 174, 177 |
| Sau3AI | GATC | 3 cut(s) | 53, 100, 106 |
| Sau96I | GGNCC | 1 cut(s) | 281 |
| SduI | GDGCHC | 2 cut(s) | 143, 213 |
| SetI | ASST | 6 cut(s) | 35, 70, 83, 181, 254, 283 |
| SinI | GGWCC | 1 cut(s) | 281 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 117 |
| Sse9I | AATT | 1 cut(s) | 181 |
| SspMI | CTAG | 1 cut(s) | 78 |
| StyI | CCWWGG | 2 cut(s) | 33, 204 |
| TaaI | ACNGT | 1 cut(s) | 133 |
| TasI | AATT | 1 cut(s) | 181 |
| TseI | GCWGC | 3 cut(s) | 65, 173, 176 |
| TspDTI | ATGAA | 1 cut(s) | 209 |
| VpaK11BI | GGWCC | 1 cut(s) | 281 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 119 |
| XspI | CTAG | 1 cut(s) | 78 |