FvH4_4g12540

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0016305
Physical Location & Seq
Reverse (-)
16224811 .. 16233923
9113 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12540.t1

Sequence Viewer

Length: 1743 bp
ATGATCCGCTCAAGTGCTCGTGCTGTTGTTGAAAGCACATGCAGGCTTGTTCTATCAGAAAACACACACAACTTGGCCACACTAGAACAAACCTGCTCTCATTTCCTACGCACTTGCGCCCAATCCTCCAACTTACCCAATGGCCAAGCCATTCATGCCAAACTCATCAAAGCCTCCCTCCCCTTTTCGCCCTTCCTTCAGAACCATCTCCTCAACATGTACGTCAAATGTGGGCATCTCAACAATGCCCTCCAACTGTTTGACGAAATGCTTCACAGAAATGTGGTGTCCTGGTCTGCGCTGATCAAAGGGTTTGTTCAACACGGCTGCGCCAAGGAAGCGTTGGCCTTGTTTGGTCGAATGCACCGGGATGGCATTACCAAGCCTAATGAGTTCACATTGGTCAGCTCTCTCCAGGCTTGCTCACTCTGTGGGAGTCTGACTCAAGCTTACCAGGTTTACGTGTTCGTTGTGCGTCTCGGGTTTGAGTGGAATGTGTTCCTCACTAATGCAATGCTGAGTGTTTTGGTGAGACATGGTGAACTGACAGAGGCTCTGCAGGTGTTTGAGAAGTGTGGTAATAGAGATATAGTGTCTTGGAATGCTATCATGGCTGGCTACTTGGAGTATGGTTGTTCAGAAGTAGCTACATTCTGGTGGAGGATGAATCGTGAGGGGATGAAGCCCGACATCTACACGTTTTCAAGTGTGCTCACTGGGCTGGCTGCTGTCGCAGATCTTAAGATGGGTGTGCAGGTTCATGCACAGCTTGTGAGACGTGGCCATGGGGCGGAGATTTGTGTGGGGAATTCCCTGGCGGATATGTATATTAAAAATCATCAGTTGCGTGATGGTTTCAAAGCTTTTTATGAGATGCCTTTGAAAGATGTGTGCTCATGGACTGAGATGGCGGCTGGCTGCCTGCAATGTGGGGAGCCTAGCAAAGCTCTTGAGGTTGTTGCTGAAATGAAAAAAGTGGGGATACGGCCAAACAAGTTCACACTTGCAACTGCCCTGAATGCGTGTGCCAATCTGGCTTCGTTGGAGGAAGGGAAGAAATTCCATGGTTTGAGAATCAAACTAGAAACATGTACCGACGTGGACGTCTGCGTAGACAATGCTCTGCTGGACATGTATGCAAAATGTGGATGCGTGGATGGTGCACGGTGTGTTTTTGAATCGATGAAGGATTGTTCTGTAGTCTCATGGACCACAATGATAATGGCGTGCGCACAAAATGGGCAGGCTAGAGAAGCTCTTCTGACTTTTGATAAGATGAGGCTGCAGGAAGGCATTCAGCCAAATTACATCACCTTTATTTGCGTGCTTTATGCGTGTAGCCAAGGCGGGTTTATAGATGAGGGATGGAAGTACTTTGCCTCCATGTCTGAAAACTATGGAATCACCCCCGGAGAAGACCATTATGCGTGCATGGTCGATCTTCTAGGAAGAGCTGGACGTATAAAGGAAGCTGAGGAATTTATTAAGAACATGCCTTTAAAACCAGGTGTTTTGGTTTGGCAGACTTTGCTTGGTGCTTGTCAGCTACTTGGGGATACAGAAACAGGGAAGCATGCAGCAGAGCATGCATTAGATATAAACAGAACAGAGCCATCGACATATATATTGCTGTCAAACATTTTTGCTGGTTTGAGCAATTGGGACAGTGTTGGGTTGCTGAGGAAACTAATGGACTCCAGAGATGTAAAGAAATTGCCTGGATCCAGTTGGATTGAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

581

Amino Acids

64.4

Weight (kDa)

6.63

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 93 - 141 1.8e-07 PPR repeat family
PPR PF01535 96 - 126 1.6e-07 PPR repeat
PPR_2 PF13041 195 - 242 5.4e-08 PPR repeat family
PPR_2 PF13041 295 - 344 2e-08 PPR repeat family
PPR_2 PF13041 399 - 447 8.9e-08 PPR repeat family
PPR_3 PF13812 399 - 446 8.7e-06 Pentatricopeptide repeat domain
PPR PF01535 401 - 427 1.8e-06 PPR repeat
PPR_long PF17177 406 - 544 6.6e-07 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 519 - 579 1e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016305)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g12540 FvH4_4g12540
malus_domestica MD14G1245400.v1.1
prunus_persica Prupe.5G243000_v2.0.a1
pyrus_communis pycom14g20640
rosa_chinensis RchiOBHm_Chr4g0411381
rosa_laevigata RLG00000008361
rosa_multiflora Rmu_sc0000629.1_g000021
rosa_roxburghii Rroxscaffold_5G00355960
rosa_rugosa Rorug04G0109600
rosa_samantha Rh4BG164500 Rh4CG179100 Rh4DG162200
rosa_wichuraiana Rw4G013840 Rw4G013940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 550
AasI GACNNNNNNGTC 1 cut(s) 1103
AatII GACGTC 1 cut(s) 1107
Acc16I TGCGCA 1 cut(s) 1231
Acc36I ACCTGC 3 cut(s) 101, 550, 745
AccBSI CCGCTC 1 cut(s) 9
AccI GTMKAC 1 cut(s) 1113
AciI CCGC 5 cut(s) 7, 791, 818, 911, 1347
AclWI GGATC 2 cut(s) 1716, 1729
AcoI YGGCCR 4 cut(s) 75, 142, 781, 986
AcsI RAATTY 3 cut(s) 808, 1058, 1478
AcuI CTGAAG 1 cut(s) 182
AcyI GRCGYC 1 cut(s) 1104
AdeI CACNNNGTG 2 cut(s) 431, 1169
AfaI GTAC 3 cut(s) 221, 1093, 1373
AfiI CCNNNNNNNGG 1 cut(s) 790
AflII CTTAAG 1 cut(s) 740
AflIII ACRYGT 5 cut(s) 216, 462, 696, 1088, 1131
AgsI TTSAA 7 cut(s) 32, 320, 705, 859, 883, 1178, 1736
AjiI CACGTC 2 cut(s) 779, 1099
AjnI CCWGG 6 cut(s) 290, 414, 453, 813, 1504, 1717
Alw21I GWGCWC 4 cut(s) 19, 714, 896, 1165
Alw26I GTCTC 4 cut(s) 482, 526, 769, 1207
Alw44I GTGCAC 1 cut(s) 1161
AlwI GGATC 2 cut(s) 1716, 1729
Ama87I CYCGRG 1 cut(s) 479
AoxI GGCC 5 cut(s) 75, 142, 345, 781, 986
ApaLI GTGCAC 1 cut(s) 1161
ApeKI GCWGC 5 cut(s) 327, 725, 918, 1282, 1577
ApoI RAATTY 3 cut(s) 808, 1058, 1478
Asp700I GAANNNNTTC 5 cut(s) 270, 497, 1058, 1257, 1293
AspLEI GCGC 4 cut(s) 119, 301, 332, 1232
AspS9I GGNCC 1 cut(s) 1209
AsuC2I CCSGG 2 cut(s) 368, 1410
AsuHPI GGTGA 4 cut(s) 541, 551, 1303, 1396
AvaI CYCGRG 1 cut(s) 479
AvaII GGWCC 1 cut(s) 1209
BaeGI GKGCMC 1 cut(s) 1165
BalI TGGCCA 3 cut(s) 77, 144, 783
BamHI GGATCC 1 cut(s) 1721
BauI CACGAG 1 cut(s) 18
BbsI GAAGAC 1 cut(s) 1422
Bbv12I GWGCWC 4 cut(s) 19, 714, 896, 1165
BbvCI CCTCAGC 2 cut(s) 1473, 1679
BbvI GCAGC 5 cut(s) 314, 712, 905, 1269, 1589
BccI CCATC 8 cut(s) 213, 365, 739, 845, 901, 1151, 1359, 1621
BceAI ACGGC 2 cut(s) 340, 1001
BciT130I CCWGG 6 cut(s) 292, 416, 455, 815, 1506, 1719
BciVI GTATCC 2 cut(s) 975, 1549
BclI TGATCA 1 cut(s) 303
BcnI CCSGG 2 cut(s) 368, 1410
BcoDI GTCTC 4 cut(s) 482, 526, 769, 1207
BfaI CTAG 5 cut(s) 83, 939, 1082, 1248, 1445
BfmI CTRYAG 3 cut(s) 557, 1197, 1283
BfrI CTTAAG 1 cut(s) 740
BfuAI ACCTGC 3 cut(s) 101, 550, 745
BfuI GTATCC 2 cut(s) 975, 1549
BglI GCCNNNNNGGC 1 cut(s) 1034
BglII AGATCT 1 cut(s) 736
BisI GCNGC 6 cut(s) 328, 726, 912, 919, 1283, 1578
BlsI GCNGC 6 cut(s) 329, 727, 913, 920, 1284, 1579
BmcAI AGTACT 1 cut(s) 1373
Bme1390I CCNGG 8 cut(s) 292, 368, 416, 455, 815, 1410, 1506, 1719
Bme18I GGWCC 1 cut(s) 1209
BmeT110I CYCGRG 1 cut(s) 479
BmgBI CACGTC 2 cut(s) 779, 1099
BmgT120I GGNCC 1 cut(s) 1209
BmiI GGNNCC 2 cut(s) 936, 1723
BmrFI CCNGG 8 cut(s) 292, 368, 416, 455, 815, 1410, 1506, 1719
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 3 cut(s) 244, 864, 1139
BmuI ACTGGG 1 cut(s) 726
BpiI GAAGAC 1 cut(s) 1422
BplI GAGNNNNNCTC 2 cut(s) 427, 459
BpmI CTGGAG 2 cut(s) 398, 1681
Bpu10I CCTNAGC 2 cut(s) 1473, 1679
BpuEI CTTGAG 2 cut(s) 429, 971
BpuMI CCSGG 2 cut(s) 368, 1410
Bsa29I ATCGAT 1 cut(s) 1181
BsaAI YACGTR 1 cut(s) 463
BsaHI GRCGYC 1 cut(s) 1104
BsaJI CCNNGG 6 cut(s) 333, 784, 813, 1063, 1342, 1408
BsaXI ACNNNNNCTCC 2 cut(s) 1364, 1394
Bsc4I CCNNNNNNNGG 1 cut(s) 790
Bse1I ACTGG 2 cut(s) 721, 1725
Bse3DI GCAATG 2 cut(s) 519, 932
BseBI CCWGG 6 cut(s) 292, 416, 455, 815, 1506, 1719
BseCI ATCGAT 1 cut(s) 1181
BseDI CCNNGG 6 cut(s) 333, 784, 813, 1063, 1342, 1408
BseGI GGATG 6 cut(s) 376, 669, 684, 1154, 1162, 1370
BseLI CCNNNNNNNGG 1 cut(s) 790
BseMI GCAATG 2 cut(s) 519, 932
BseMII CTCAG 4 cut(s) 509, 894, 1464, 1670
BseNI ACTGG 2 cut(s) 721, 1725
BseRI GAGGAG 1 cut(s) 200
BseSI GKGCMC 1 cut(s) 1165
BseXI GCAGC 5 cut(s) 314, 712, 905, 1269, 1589
BsgI GTGCAG 1 cut(s) 773
BshFI GGCC 5 cut(s) 77, 144, 347, 783, 988
BshVI ATCGAT 1 cut(s) 1181
BsiHKAI GWGCWC 4 cut(s) 19, 714, 896, 1165
BsiHKCI CYCGRG 1 cut(s) 479
BsiSI CCGG 2 cut(s) 367, 1410
BslFI GGGAC 1 cut(s) 1676
BslI CCNNNNNNNGG 1 cut(s) 790
BsmAI GTCTC 4 cut(s) 482, 526, 769, 1207
BsmBI CGTCTC 2 cut(s) 482, 769
BsmFI GGGAC 1 cut(s) 1676
BsmI GAATGC 4 cut(s) 366, 607, 1024, 1293
BsnI GGCC 5 cut(s) 77, 144, 347, 783, 988
BsoBI CYCGRG 1 cut(s) 479
Bsp1286I GDGCHC 4 cut(s) 19, 714, 896, 1165
Bsp143I GATC 5 cut(s) 3, 303, 736, 1438, 1721
Bsp19I CCATGG 2 cut(s) 784, 1063
BspACI CCGC 5 cut(s) 7, 791, 818, 911, 1347
BspANI GGCC 5 cut(s) 77, 144, 347, 783, 988
BspCNI CTCAG 4 cut(s) 510, 895, 1465, 1671
BspDI ATCGAT 1 cut(s) 1181
BspLI GGNNCC 2 cut(s) 936, 1723
BspMAI CTGCAG 2 cut(s) 561, 1287
BspMI ACCTGC 3 cut(s) 101, 550, 745
BspPI GGATC 2 cut(s) 1716, 1729
BspQI GCTCTTC 2 cut(s) 1263, 1444
BspTI CTTAAG 1 cut(s) 740
BsrBI CCGCTC 1 cut(s) 9
BsrDI GCAATG 2 cut(s) 519, 932
BsrI ACTGG 2 cut(s) 721, 1725
BssECI CCNNGG 6 cut(s) 333, 784, 813, 1063, 1342, 1408
BssMI GATC 5 cut(s) 3, 303, 736, 1438, 1721
BssNI GRCGYC 1 cut(s) 1104
BssSI CACGAG 1 cut(s) 18
BssT1I CCWWGG 4 cut(s) 333, 784, 1063, 1342
Bst2BI CACGAG 1 cut(s) 18
Bst2UI CCWGG 6 cut(s) 292, 416, 455, 815, 1506, 1719
Bst4CI ACNGT 3 cut(s) 258, 1167, 1667
Bst6I CTCTTC 2 cut(s) 1263, 1444
BstACI GRCGYC 1 cut(s) 1104
BstAFI CTTAAG 1 cut(s) 740
BstAPI GCANNNNNTGC 2 cut(s) 1528, 1586
BstBAI YACGTR 1 cut(s) 463
BstDEI CTNAG 4 cut(s) 518, 903, 1473, 1679
BstDSI CCRYGG 2 cut(s) 784, 1063
BstF5I GGATG 6 cut(s) 376, 669, 684, 1154, 1162, 1370
BstHHI GCGC 4 cut(s) 119, 301, 332, 1232
BstKTI GATC 5 cut(s) 6, 306, 739, 1441, 1724
BstMAI GTCTC 4 cut(s) 482, 526, 769, 1207
BstMBI GATC 5 cut(s) 3, 303, 736, 1438, 1721
BstNI CCWGG 6 cut(s) 292, 416, 455, 815, 1506, 1719
BstNSI RCATGY 7 cut(s) 42, 220, 1092, 1135, 1495, 1577, 1589
BstSCI CCNGG 8 cut(s) 290, 366, 414, 453, 813, 1408, 1504, 1717
BstSFI CTRYAG 3 cut(s) 557, 1197, 1283
BstSLI GKGCMC 1 cut(s) 1165
BstV1I GCAGC 5 cut(s) 314, 712, 905, 1269, 1589
BstV2I GAAGAC 1 cut(s) 1422
BstX2I RGATCY 2 cut(s) 736, 1721
BstYI RGATCY 2 cut(s) 736, 1721
Bsu15I ATCGAT 1 cut(s) 1181
BsuI GTATCC 2 cut(s) 975, 1549
BsuRI GGCC 5 cut(s) 77, 144, 347, 783, 988
BsuTUI ATCGAT 1 cut(s) 1181
BtgI CCRYGG 2 cut(s) 784, 1063
BtrI CACGTC 2 cut(s) 779, 1099
BtsCI GGATG 6 cut(s) 376, 669, 684, 1154, 1162, 1370
BtsIMutI CAGTG 2 cut(s) 714, 1672
BveI ACCTGC 3 cut(s) 101, 550, 745
CfoI GCGC 4 cut(s) 119, 301, 332, 1232
Cfr13I GGNCC 1 cut(s) 1209
ClaI ATCGAT 1 cut(s) 1181
CseI GACGC 1 cut(s) 464
CsiI ACCWGGT 2 cut(s) 453, 1504
Csp6I GTAC 3 cut(s) 220, 1092, 1372
CviQI GTAC 3 cut(s) 220, 1092, 1372
DdeI CTNAG 4 cut(s) 518, 903, 1473, 1679
DpnI GATC 5 cut(s) 5, 305, 738, 1440, 1723
DpnII GATC 5 cut(s) 3, 303, 736, 1438, 1721
DraI TTTAAA 1 cut(s) 1500
DraIII CACNNNGTG 2 cut(s) 431, 1169
DrdI GACNNNNNNGTC 1 cut(s) 1103
DseDI GACNNNNNNGTC 1 cut(s) 1103
EaeI YGGCCR 4 cut(s) 75, 142, 781, 986
Eam1104I CTCTTC 2 cut(s) 1263, 1444
EarI CTCTTC 2 cut(s) 1263, 1444
EciI GGCGGA 2 cut(s) 806, 833
Eco130I CCWWGG 4 cut(s) 333, 784, 1063, 1342
Eco47I GGWCC 1 cut(s) 1209
Eco57I CTGAAG 1 cut(s) 182
Eco88I CYCGRG 1 cut(s) 479
EcoRI GAATTC 1 cut(s) 808
EcoRII CCWGG 6 cut(s) 290, 414, 453, 813, 1504, 1717
EcoT14I CCWWGG 4 cut(s) 333, 784, 1063, 1342
EcoT22I ATGCAT 1 cut(s) 1591
ErhI CCWWGG 4 cut(s) 333, 784, 1063, 1342
Esp3I CGTCTC 2 cut(s) 482, 769
FaqI GGGAC 1 cut(s) 1676
FauI CCCGC 1 cut(s) 1340
FbaI TGATCA 1 cut(s) 303
FblI GTMKAC 1 cut(s) 1113
Fnu4HI GCNGC 6 cut(s) 328, 726, 912, 919, 1283, 1578
FokI GGATG 6 cut(s) 383, 676, 691, 1161, 1169, 1377
Fsp4HI GCNGC 6 cut(s) 328, 726, 912, 919, 1283, 1578
FspAI RTGCGCAY 1 cut(s) 1231
FspBI CTAG 5 cut(s) 83, 939, 1082, 1248, 1445
FspI TGCGCA 1 cut(s) 1231
GlaI GCGC 4 cut(s) 118, 300, 331, 1231
GluI GCNGC 6 cut(s) 328, 726, 912, 919, 1283, 1578
GsuI CTGGAG 2 cut(s) 398, 1681
HaeIII GGCC 5 cut(s) 77, 144, 347, 783, 988
HapII CCGG 2 cut(s) 367, 1410
HgaI GACGC 1 cut(s) 464
HhaI GCGC 4 cut(s) 119, 301, 332, 1232
Hin1I GRCGYC 1 cut(s) 1104
Hin6I GCGC 4 cut(s) 117, 299, 330, 1230
HinP1I GCGC 4 cut(s) 117, 299, 330, 1230
HindIII AAGCTT 2 cut(s) 447, 861
HinfI GANTC 7 cut(s) 436, 442, 667, 1074, 1178, 1401, 1694
HpaII CCGG 2 cut(s) 367, 1410
HphI GGTGA 4 cut(s) 541, 551, 1303, 1396
Hpy166II GTNNAC 7 cut(s) 396, 460, 542, 999, 1102, 1114, 1163
Hpy188I TCNGA 6 cut(s) 58, 201, 441, 640, 1263, 1390
Hpy188III TCNNGA 3 cut(s) 671, 950, 1698
Hpy8I GTNNAC 7 cut(s) 396, 460, 542, 999, 1102, 1114, 1163
Hpy99I CGWCG 1 cut(s) 1100
HpyAV CCTTC 5 cut(s) 202, 206, 1043, 1180, 1283
HpyCH4III ACNGT 3 cut(s) 258, 1167, 1667
HpyCH4IV ACGT 7 cut(s) 222, 462, 698, 778, 1098, 1104, 1459
HpyF3I CTNAG 4 cut(s) 518, 903, 1473, 1679
HpySE526I ACGT 7 cut(s) 222, 462, 698, 778, 1098, 1104, 1459
Hsp92I GRCGYC 1 cut(s) 1104
HspAI GCGC 4 cut(s) 117, 299, 330, 1230
Ksp22I TGATCA 1 cut(s) 303
Kzo9I GATC 5 cut(s) 3, 303, 736, 1438, 1721
LguI GCTCTTC 2 cut(s) 1263, 1444
LmnI GCTCC 1 cut(s) 934
Lsp1109I GCAGC 5 cut(s) 314, 712, 905, 1269, 1589
LweI GCATC 3 cut(s) 244, 864, 1139
MabI ACCWGGT 2 cut(s) 453, 1504
MaeI CTAG 5 cut(s) 83, 939, 1082, 1248, 1445
MaeII ACGT 7 cut(s) 222, 462, 698, 778, 1098, 1104, 1459
MalI GATC 5 cut(s) 5, 305, 738, 1440, 1723
MbiI CCGCTC 1 cut(s) 9
MboI GATC 5 cut(s) 3, 303, 736, 1438, 1721
MboII GAAGA 5 cut(s) 1066, 1250, 1427, 1433, 1461
MfeI CAATTG 1 cut(s) 1657
MflI RGATCY 2 cut(s) 736, 1721
MhlI GDGCHC 4 cut(s) 19, 714, 896, 1165
MlsI TGGCCA 3 cut(s) 77, 144, 783
MluCI AATT 6 cut(s) 808, 1058, 1303, 1478, 1657, 1712
MluNI TGGCCA 3 cut(s) 77, 144, 783
MlyI GAGTC 3 cut(s) 436, 445, 1688
MmeI TCCRAC 4 cut(s) 153, 277, 1023, 1709
Mox20I TGGCCA 3 cut(s) 77, 144, 783
Mph1103I ATGCAT 1 cut(s) 1591
MroXI GAANNNNTTC 5 cut(s) 270, 497, 1058, 1257, 1293
MscI TGGCCA 3 cut(s) 77, 144, 783
MseI TTAA 4 cut(s) 741, 831, 1485, 1499
MslI CAYNNNNRTG 3 cut(s) 279, 369, 655
Msp20I TGGCCA 3 cut(s) 77, 144, 783
MspCI CTTAAG 1 cut(s) 740
MspI CCGG 2 cut(s) 367, 1410
MspR9I CCNGG 8 cut(s) 292, 368, 416, 455, 815, 1410, 1506, 1719
MunI CAATTG 1 cut(s) 1657
Mva1269I GAATGC 4 cut(s) 366, 607, 1024, 1293
MvaI CCWGG 6 cut(s) 292, 416, 455, 815, 1506, 1719
NciI CCSGG 2 cut(s) 368, 1410
NcoI CCATGG 2 cut(s) 784, 1063
NdeII GATC 5 cut(s) 3, 303, 736, 1438, 1721
NlaIV GGNNCC 2 cut(s) 936, 1723
NsbI TGCGCA 1 cut(s) 1231
NsiI ATGCAT 1 cut(s) 1591
NspI RCATGY 7 cut(s) 42, 220, 1092, 1135, 1495, 1577, 1589
PaeI GCATGC 2 cut(s) 1577, 1589
PaqCI CACCTGC 1 cut(s) 550
PciI ACATGT 3 cut(s) 216, 1088, 1131
PciSI GCTCTTC 2 cut(s) 1263, 1444
PctI GAATGC 4 cut(s) 366, 607, 1024, 1293
PdmI GAANNNNTTC 5 cut(s) 270, 497, 1058, 1257, 1293
PfeI GAWTC 4 cut(s) 667, 1074, 1178, 1401
PkrI GCNGC 6 cut(s) 329, 727, 913, 920, 1284, 1579
PleI GAGTC 3 cut(s) 436, 444, 1688
PpsI GAGTC 3 cut(s) 436, 444, 1688
Ppu21I YACGTR 1 cut(s) 463
PscI ACATGT 3 cut(s) 216, 1088, 1131
Psp6I CCWGG 6 cut(s) 290, 414, 453, 813, 1504, 1717
PspGI CCWGG 6 cut(s) 290, 414, 453, 813, 1504, 1717
PspN4I GGNNCC 2 cut(s) 936, 1723
PspPI GGNCC 1 cut(s) 1209
PstI CTGCAG 2 cut(s) 561, 1287
PsuI RGATCY 2 cut(s) 736, 1721
RsaI GTAC 3 cut(s) 221, 1093, 1373
RsaNI GTAC 3 cut(s) 220, 1092, 1372
RseI CAYNNNNRTG 3 cut(s) 279, 369, 655
SapI GCTCTTC 2 cut(s) 1263, 1444
SaqAI TTAA 4 cut(s) 741, 831, 1485, 1499
SatI GCNGC 6 cut(s) 328, 726, 912, 919, 1283, 1578
Sau3AI GATC 5 cut(s) 3, 303, 736, 1438, 1721
Sau96I GGNCC 1 cut(s) 1209
ScaI AGTACT 1 cut(s) 1373
SchI GAGTC 3 cut(s) 436, 445, 1688
ScrFI CCNGG 8 cut(s) 292, 368, 416, 455, 815, 1410, 1506, 1719
SduI GDGCHC 4 cut(s) 19, 714, 896, 1165
SexAI ACCWGGT 2 cut(s) 453, 1504
SfaNI GCATC 3 cut(s) 244, 864, 1139
SfcI CTRYAG 3 cut(s) 557, 1197, 1283
SinI GGWCC 1 cut(s) 1209
SmiMI CAYNNNNRTG 3 cut(s) 279, 369, 655
SmlI CTYRAG 4 cut(s) 10, 444, 740, 950
SmoI CTYRAG 4 cut(s) 10, 444, 740, 950
SphI GCATGC 2 cut(s) 1577, 1589
Sse9I AATT 6 cut(s) 808, 1058, 1303, 1478, 1657, 1712
SsiI CCGC 5 cut(s) 7, 791, 818, 911, 1347
SspMI CTAG 5 cut(s) 83, 939, 1082, 1248, 1445
StyD4I CCNGG 8 cut(s) 290, 366, 414, 453, 813, 1408, 1504, 1717
StyI CCWWGG 4 cut(s) 333, 784, 1063, 1342
TaaI ACNGT 3 cut(s) 258, 1167, 1667
TaiI ACGT 7 cut(s) 225, 465, 701, 781, 1101, 1107, 1462
TaqI TCGA 4 cut(s) 358, 1181, 1437, 1616
TasI AATT 6 cut(s) 808, 1058, 1303, 1478, 1657, 1712
TatI WGTACW 1 cut(s) 1371
TauI GCSGC 1 cut(s) 914
TfiI GAWTC 4 cut(s) 667, 1074, 1178, 1401
Tru1I TTAA 4 cut(s) 741, 831, 1485, 1499
Tru9I TTAA 4 cut(s) 741, 831, 1485, 1499
TscAI CASTG 2 cut(s) 721, 1672
TseI GCWGC 5 cut(s) 327, 725, 918, 1282, 1577
TspDTI ATGAA 6 cut(s) 143, 680, 695, 749, 983, 1199
TspRI CASTG 2 cut(s) 721, 1672
Vha464I CTTAAG 1 cut(s) 740
VneI GTGCAC 1 cut(s) 1161
VpaK11BI GGWCC 1 cut(s) 1209
XapI RAATTY 3 cut(s) 808, 1058, 1478
XceI RCATGY 7 cut(s) 42, 220, 1092, 1135, 1495, 1577, 1589
XcmI CCANNNNNNNNNTGG 2 cut(s) 340, 1219
XmiI GTMKAC 1 cut(s) 1113
XmnI GAANNNNTTC 5 cut(s) 270, 497, 1058, 1257, 1293
XspI CTAG 5 cut(s) 83, 939, 1082, 1248, 1445
ZraI GACGTC 1 cut(s) 1105
ZrmI AGTACT 1 cut(s) 1373
Zsp2I ATGCAT 1 cut(s) 1591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.