Prupe.5G243000_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0016305
Physical Location & Seq
Forward (+)
18251008 .. 18253215
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G243000.1

Sequence Viewer

Length: 1761 bp
ATGCTCCGCCCGCGCCCAGGTAGTCGTGCTCTTTTTGGAGACACATTTACGCTTGCGGCATCAAAATCCACTCACATCTTGCCCACAGAGGAAGAGACTTACTCCCAATTGTTGCGTACATGTGGCCAAACCTCTAACTTACCCCATGGCAAAGCAATTCATGCAAAACTCGTCAAGGGCTCTCTGCCCTTTTCGCCTTTTCTTCAAAATCATTTACTCAACATGTATGCTAAATGCGGCGATCTTAGCAATGGTCTCCAACTGTTTGATGAAATGCCTCACAAGAATGTTGTGTCGTGGTCTGCGGTTATTACTGGCTTTGTCCAACATGGCTGTCCTAAAGAAGCCCTATCTTTGTTTGGTCGTATGCACCAGGATGGCACGACCAAGCCCAATGAGTTTACCTTGGTTAGCGCGCTCCACGCATGTTCCTTGTATGGCAATCTGACTCAAGCTTACCAAGTTTACGCATTCATAGTTCGCCTAGGATTCCAGTGGAATGCTTTCCTGATGAATGCATTCTTGACTGTTTTAGTAAGACAGGGGGAATTAACAGAGGCTTTGGAAGTGTTTGAGAATTGCCCCAATAAAGATATTGTGTCTTGGAATGCTATCATGGCTGGCTACTTGCAGTGTTCTTATTTGGAAATACCAAACTTCTGGTGTCGTATGAATCGCGAGGGAGTGAAACCCGACGGCTACACATTTTCGAGTGTTCTCACTGGGTTGGCTGCTCTCACTGATATTAAAATGGGTGTCCAGGTTCATGCACAGCTTGTCAGGTGTGGTCATGGGGCTGAGATGTGTGTGGGGAACTCTTTGGCTGATATGTACATTAAAAATCACAAGTTAGTGGATGGCTTCAAAGCCTTTGATGAGATGCCTTCAAAAGATGTGTGTTCATGGACCCAAATGGCTGCCGGGTGCCTACAATGTGGGGAACCAAGCAAAACGCTTGAGGTTATTGCTCAAATGAAGAAAGTGGGTATAAAGCCAAACAAGTTCACGCTTGCAACTGCCCTGAATGCCTGTGCCAATTTGGCTTCCTTGGATGACGGGAAGAAATTCCATGGCTTGAGAATTAAACTCGAAACTAGTACTGATGTTGATGTGTGTGTGGATAACGCTCTGCTAGACATGTATGCAAAATGTGGATGCATGGAGGGTGCATGGTGTGTTTTTCAGTCAATGAAGGATCGTTCTGTGGTGTCATGGACCACAATGATCATGGGGTGCGCACAAAATGGGCAAGCTAGAGAAGCTCTTGACATTTTTGATAAGATGAGGCTGGAGGAAGGTGTTGAGCCAAATTACATCACCTTCATATGCCTGCTTTATGCATGTAGCCAAGGAGGGTTTATTCATGAAGGATGGAAGTATTTTGCCTCCATGACTCATAACCATGGAATCGCCCCCGGAGAAGACCATTATGCATGCATGGTGAATCTTCTAGGCCGAGCTGGACTTATAAAGGAAGCTGAGCGATTAATCTTGAACATGCCCTTTAAACCAGGTGTTCTGGTTTGGCAAACTTTGCTTGGTGCTTGTCAGGTTCATGGCGATACAGAAACTGGAAAGCGTGCAGCAGAGCATGCATTAGATATAAACAGAACAGACCCATCAACGTATGTATTACTGTCAAACATGTTTGCTGGTTTGAGCAACTGGGACAGTGCTGGGATGCTGAGGAAACTAATGGAGTCTAGGGATGTAAAGAAATTGCCTGGATCCAGTTGGATTGAAATTGAAAAAGGCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

587

Amino Acids

64.84

Weight (kDa)

6.67

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016305)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g12540 FvH4_4g12540
malus_domestica MD14G1245400.v1.1
prunus_persica Prupe.5G243000_v2.0.a1
pyrus_communis pycom14g20640
rosa_chinensis RchiOBHm_Chr4g0411381
rosa_laevigata RLG00000008361
rosa_multiflora Rmu_sc0000629.1_g000021
rosa_roxburghii Rroxscaffold_5G00355960
rosa_rugosa Rorug04G0109600
rosa_samantha Rh4BG164500 Rh4CG179100 Rh4DG162200
rosa_wichuraiana Rw4G013840 Rw4G013940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1469
Acc16I TGCGCA 1 cut(s) 1237
AccB1I GGYRCC 1 cut(s) 924
AccII CGCG 3 cut(s) 13, 416, 678
AciI CCGC 5 cut(s) 7, 11, 56, 237, 305
AclWI GGATC 3 cut(s) 1203, 1722, 1735
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 1 cut(s) 1064
AfaI GTAC 3 cut(s) 118, 833, 1099
AfiI CCNNNNNNNGG 1 cut(s) 17
AflIII ACRYGT 4 cut(s) 119, 222, 1137, 1644
AgsI TTSAA 6 cut(s) 206, 865, 888, 1495, 1742, 1748
AhlI ACTAGT 1 cut(s) 1094
AjnI CCWGG 5 cut(s) 16, 372, 759, 1510, 1723
AluBI AGCT 6 cut(s) 455, 775, 1253, 1262, 1460, 1478
AluI AGCT 6 cut(s) 455, 775, 1253, 1262, 1460, 1478
Alw21I GWGCWC 1 cut(s) 31
Alw26I GTCTC 3 cut(s) 33, 89, 260
AlwI GGATC 3 cut(s) 1203, 1722, 1735
AlwNI CAGNNNCTG 1 cut(s) 1571
AoxI GGCC 3 cut(s) 124, 1453, 1753
ApeKI GCWGC 3 cut(s) 731, 917, 1583
ApoI RAATTY 1 cut(s) 1064
AseI ATTAAT 1 cut(s) 1487
Asp700I GAANNNNTTC 3 cut(s) 503, 518, 1064
AspA2I CCTAGG 1 cut(s) 484
AspLEI GCGC 4 cut(s) 15, 416, 418, 1238
AspS9I GGNCC 2 cut(s) 906, 1215
AsuC2I CCSGG 2 cut(s) 922, 1416
AsuHPI GGTGA 2 cut(s) 1309, 1453
AvaII GGWCC 2 cut(s) 906, 1215
AvrII CCTAGG 1 cut(s) 484
BalI TGGCCA 1 cut(s) 126
BamHI GGATCC 1 cut(s) 1727
BanI GGYRCC 1 cut(s) 924
BanII GRGCYC 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 1428
Bbv12I GWGCWC 1 cut(s) 31
BbvCI CCTCAGC 1 cut(s) 1685
BbvI GCAGC 3 cut(s) 718, 904, 1595
BccI CCATC 4 cut(s) 371, 851, 1365, 1627
BceAI ACGGC 1 cut(s) 712
BciT130I CCWGG 5 cut(s) 18, 374, 761, 1512, 1725
BclI TGATCA 1 cut(s) 1224
BcnI CCSGG 2 cut(s) 922, 1416
BcoDI GTCTC 3 cut(s) 33, 89, 260
BcuI ACTAGT 1 cut(s) 1094
BfaI CTAG 6 cut(s) 485, 1095, 1133, 1254, 1451, 1704
BglI GCCNNNNNGGC 1 cut(s) 1040
BisI GCNGC 5 cut(s) 57, 238, 732, 918, 1584
BlnI CCTAGG 1 cut(s) 484
BlpI GCTNAGC 1 cut(s) 1479
BlsI GCNGC 5 cut(s) 58, 239, 733, 919, 1585
BmcAI AGTACT 1 cut(s) 1099
Bme1390I CCNGG 7 cut(s) 18, 374, 761, 922, 1416, 1512, 1725
Bme18I GGWCC 2 cut(s) 906, 1215
BmgT120I GGNCC 2 cut(s) 906, 1215
BmiI GGNNCC 4 cut(s) 908, 926, 942, 1729
BmrFI CCNGG 7 cut(s) 18, 374, 761, 922, 1416, 1512, 1725
BmrI ACTGGG 2 cut(s) 732, 1675
BmsI GCATC 4 cut(s) 68, 870, 1145, 1671
BmuI ACTGGG 2 cut(s) 732, 1675
BpiI GAAGAC 1 cut(s) 1428
BplI GAGNNNNNCTC 2 cut(s) 86, 118
BpmI CTGGAG 1 cut(s) 1310
Bpu10I CCTNAGC 1 cut(s) 1685
Bpu1102I GCTNAGC 1 cut(s) 1479
BpuEI CTTGAG 3 cut(s) 435, 977, 1096
BpuMI CCSGG 2 cut(s) 922, 1416
BsaI GGTCTC 1 cut(s) 260
BsaJI CCNNGG 9 cut(s) 16, 145, 405, 484, 1047, 1069, 1348, 1402, 1414
Bsc4I CCNNNNNNNGG 1 cut(s) 17
Bse1I ACTGG 6 cut(s) 319, 493, 727, 1576, 1670, 1731
Bse3DI GCAATG 1 cut(s) 256
BseBI CCWGG 5 cut(s) 18, 374, 761, 1512, 1725
BseDI CCNNGG 9 cut(s) 16, 145, 405, 484, 1047, 1069, 1348, 1402, 1414
BseGI GGATG 7 cut(s) 382, 862, 1057, 1160, 1376, 1686, 1714
BseLI CCNNNNNNNGG 1 cut(s) 17
BseMI GCAATG 1 cut(s) 256
BseMII CTCAG 3 cut(s) 789, 1470, 1676
BseNI ACTGG 6 cut(s) 319, 493, 727, 1576, 1670, 1731
BsePI GCGCGC 1 cut(s) 414
BseXI GCAGC 3 cut(s) 718, 904, 1595
BseYI CCCAGC 1 cut(s) 1676
BsgI GTGCAG 1 cut(s) 1602
Bsh1236I CGCG 3 cut(s) 13, 416, 678
BshFI GGCC 3 cut(s) 126, 1455, 1755
BshNI GGYRCC 1 cut(s) 924
BsiHKAI GWGCWC 1 cut(s) 31
BsiSI CCGG 2 cut(s) 921, 1416
BslFI GGGAC 1 cut(s) 1682
BslI CCNNNNNNNGG 1 cut(s) 17
BsmAI GTCTC 3 cut(s) 33, 89, 260
BsmFI GGGAC 1 cut(s) 1682
BsmI GAATGC 6 cut(s) 470, 505, 518, 520, 613, 1030
BsnI GGCC 3 cut(s) 126, 1455, 1755
Bso31I GGTCTC 1 cut(s) 260
Bsp1286I GDGCHC 2 cut(s) 31, 182
Bsp1407I TGTACA 1 cut(s) 831
Bsp143I GATC 4 cut(s) 241, 1195, 1224, 1727
Bsp1720I GCTNAGC 1 cut(s) 1479
Bsp19I CCATGG 3 cut(s) 145, 1069, 1402
Bsp68I TCGCGA 1 cut(s) 678
BspACI CCGC 5 cut(s) 7, 11, 56, 237, 305
BspANI GGCC 3 cut(s) 126, 1455, 1755
BspCNI CTCAG 3 cut(s) 790, 1471, 1677
BspFNI CGCG 3 cut(s) 13, 416, 678
BspHI TCATGA 1 cut(s) 1363
BspLI GGNNCC 4 cut(s) 908, 926, 942, 1729
BspPI GGATC 3 cut(s) 1203, 1722, 1735
BspT107I GGYRCC 1 cut(s) 924
BspTNI GGTCTC 1 cut(s) 260
BsrDI GCAATG 1 cut(s) 256
BsrGI TGTACA 1 cut(s) 831
BsrI ACTGG 6 cut(s) 319, 493, 727, 1576, 1670, 1731
BssECI CCNNGG 9 cut(s) 16, 145, 405, 484, 1047, 1069, 1348, 1402, 1414
BssHII GCGCGC 1 cut(s) 414
BssMI GATC 4 cut(s) 241, 1195, 1224, 1727
BssT1I CCWWGG 7 cut(s) 145, 405, 484, 1047, 1069, 1348, 1402
Bst2UI CCWGG 5 cut(s) 18, 374, 761, 1512, 1725
Bst4CI ACNGT 4 cut(s) 264, 529, 1638, 1673
Bst6I CTCTTC 1 cut(s) 87
BstAPI GCANNNNNTGC 3 cut(s) 161, 1534, 1592
BstAUI TGTACA 1 cut(s) 831
BstDEI CTNAG 4 cut(s) 245, 798, 1479, 1685
BstDSI CCRYGG 3 cut(s) 145, 1069, 1402
BstF5I GGATG 7 cut(s) 382, 862, 1057, 1160, 1376, 1686, 1714
BstFNI CGCG 3 cut(s) 13, 416, 678
BstHHI GCGC 4 cut(s) 15, 416, 418, 1238
BstKTI GATC 4 cut(s) 244, 1198, 1227, 1730
BstMAI GTCTC 3 cut(s) 33, 89, 260
BstMBI GATC 4 cut(s) 241, 1195, 1224, 1727
BstNI CCWGG 5 cut(s) 18, 374, 761, 1512, 1725
BstNSI RCATGY 9 cut(s) 123, 226, 429, 1141, 1344, 1437, 1501, 1595, 1648
BstSCI CCNGG 7 cut(s) 16, 372, 759, 920, 1414, 1510, 1723
BstUI CGCG 3 cut(s) 13, 416, 678
BstV1I GCAGC 3 cut(s) 718, 904, 1595
BstV2I GAAGAC 1 cut(s) 1428
BstX2I RGATCY 1 cut(s) 1727
BstXI CCANNNNNNTGG 1 cut(s) 660
BstYI RGATCY 1 cut(s) 1727
BsuRI GGCC 3 cut(s) 126, 1455, 1755
BtgI CCRYGG 3 cut(s) 145, 1069, 1402
BtsCI GGATG 7 cut(s) 382, 862, 1057, 1160, 1376, 1686, 1714
BtsI GCAGTG 1 cut(s) 638
BtsIMutI CAGTG 6 cut(s) 500, 638, 720, 738, 1678, 1756
BtuMI TCGCGA 1 cut(s) 678
CaiI CAGNNNCTG 1 cut(s) 1571
CciI TCATGA 1 cut(s) 1363
CfoI GCGC 4 cut(s) 15, 416, 418, 1238
Cfr13I GGNCC 2 cut(s) 906, 1215
CsiI ACCWGGT 1 cut(s) 1510
Csp6I GTAC 3 cut(s) 117, 832, 1098
CviQI GTAC 3 cut(s) 117, 832, 1098
DdeI CTNAG 4 cut(s) 245, 798, 1479, 1685
DpnI GATC 4 cut(s) 243, 1197, 1226, 1729
DpnII GATC 4 cut(s) 241, 1195, 1224, 1727
DraI TTTAAA 1 cut(s) 1507
EaeI YGGCCR 1 cut(s) 124
Eam1104I CTCTTC 1 cut(s) 87
EarI CTCTTC 1 cut(s) 87
Eco130I CCWWGG 7 cut(s) 145, 405, 484, 1047, 1069, 1348, 1402
Eco24I GRGCYC 1 cut(s) 182
Eco31I GGTCTC 1 cut(s) 260
Eco47I GGWCC 2 cut(s) 906, 1215
EcoRII CCWGG 5 cut(s) 16, 372, 759, 1510, 1723
EcoT14I CCWWGG 7 cut(s) 145, 405, 484, 1047, 1069, 1348, 1402
EcoT22I ATGCAT 6 cut(s) 520, 1160, 1342, 1435, 1439, 1597
EcoT38I GRGCYC 1 cut(s) 182
ErhI CCWWGG 7 cut(s) 145, 405, 484, 1047, 1069, 1348, 1402
FaqI GGGAC 1 cut(s) 1682
FauI CCCGC 1 cut(s) 18
FauNDI CATATG 1 cut(s) 1325
FbaI TGATCA 1 cut(s) 1224
Fnu4HI GCNGC 5 cut(s) 57, 238, 732, 918, 1584
FokI GGATG 7 cut(s) 389, 869, 1064, 1167, 1383, 1693, 1721
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 5 cut(s) 57, 238, 732, 918, 1584
FspAI RTGCGCAY 1 cut(s) 1237
FspBI CTAG 6 cut(s) 485, 1095, 1133, 1254, 1451, 1704
FspI TGCGCA 1 cut(s) 1237
GlaI GCGC 4 cut(s) 14, 415, 417, 1237
GluI GCNGC 5 cut(s) 57, 238, 732, 918, 1584
GsaI CCCAGC 1 cut(s) 1680
GsuI CTGGAG 1 cut(s) 1310
HaeIII GGCC 3 cut(s) 126, 1455, 1755
HapII CCGG 2 cut(s) 921, 1416
HhaI GCGC 4 cut(s) 15, 416, 418, 1238
Hin6I GCGC 4 cut(s) 13, 414, 416, 1236
HinP1I GCGC 4 cut(s) 13, 414, 416, 1236
HindIII AAGCTT 1 cut(s) 453
HinfI GANTC 7 cut(s) 448, 489, 673, 1393, 1407, 1444, 1700
HpaII CCGG 2 cut(s) 921, 1416
HphI GGTGA 2 cut(s) 1309, 1453
Hpy166II GTNNAC 3 cut(s) 402, 466, 1005
Hpy188I TCNGA 1 cut(s) 447
Hpy188III TCNNGA 6 cut(s) 508, 523, 677, 1265, 1364, 1492
Hpy8I GTNNAC 3 cut(s) 402, 466, 1005
Hpy99I CGWCG 1 cut(s) 698
HpyAV CCTTC 5 cut(s) 894, 1186, 1289, 1330, 1361
HpyCH4III ACNGT 4 cut(s) 264, 529, 1638, 1673
HpyCH4IV ACGT 1 cut(s) 1625
HpyF3I CTNAG 4 cut(s) 245, 798, 1479, 1685
HpySE526I ACGT 1 cut(s) 1625
HspAI GCGC 4 cut(s) 13, 414, 416, 1236
Ksp22I TGATCA 1 cut(s) 1224
Kzo9I GATC 4 cut(s) 241, 1195, 1224, 1727
LmnI GCTCC 2 cut(s) 9, 423
Lsp1109I GCAGC 3 cut(s) 718, 904, 1595
LweI GCATC 4 cut(s) 68, 870, 1145, 1671
MabI ACCWGGT 1 cut(s) 1510
MaeI CTAG 6 cut(s) 485, 1095, 1133, 1254, 1451, 1704
MaeII ACGT 1 cut(s) 1625
MalI GATC 4 cut(s) 243, 1197, 1226, 1729
MboI GATC 4 cut(s) 241, 1195, 1224, 1727
MboII GAAGA 6 cut(s) 104, 194, 988, 1072, 1433, 1439
MfeI CAATTG 1 cut(s) 107
MflI RGATCY 1 cut(s) 1727
MhlI GDGCHC 2 cut(s) 31, 182
MlsI TGGCCA 1 cut(s) 126
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 3 cut(s) 442, 1387, 1709
MmeI TCCRAC 3 cut(s) 283, 349, 1715
Mox20I TGGCCA 1 cut(s) 126
Mph1103I ATGCAT 6 cut(s) 520, 1160, 1342, 1435, 1439, 1597
MroXI GAANNNNTTC 3 cut(s) 503, 518, 1064
MscI TGGCCA 1 cut(s) 126
MseI TTAA 6 cut(s) 551, 747, 837, 1083, 1487, 1506
MslI CAYNNNNRTG 3 cut(s) 285, 375, 1401
Msp20I TGGCCA 1 cut(s) 126
MspI CCGG 2 cut(s) 921, 1416
MspR9I CCNGG 7 cut(s) 18, 374, 761, 922, 1416, 1512, 1725
MunI CAATTG 1 cut(s) 107
Mva1269I GAATGC 6 cut(s) 470, 505, 518, 520, 613, 1030
MvaI CCWGG 5 cut(s) 18, 374, 761, 1512, 1725
MvnI CGCG 3 cut(s) 13, 416, 678
NciI CCSGG 2 cut(s) 922, 1416
NcoI CCATGG 3 cut(s) 145, 1069, 1402
NdeI CATATG 1 cut(s) 1325
NdeII GATC 4 cut(s) 241, 1195, 1224, 1727
NlaIV GGNNCC 4 cut(s) 908, 926, 942, 1729
NmeAIII GCCGAG 1 cut(s) 1481
NruI TCGCGA 1 cut(s) 678
NsbI TGCGCA 1 cut(s) 1237
NsiI ATGCAT 6 cut(s) 520, 1160, 1342, 1435, 1439, 1597
NspI RCATGY 9 cut(s) 123, 226, 429, 1141, 1344, 1437, 1501, 1595, 1648
PaeI GCATGC 2 cut(s) 1437, 1595
PagI TCATGA 1 cut(s) 1363
PauI GCGCGC 1 cut(s) 414
PciI ACATGT 4 cut(s) 119, 222, 1137, 1644
PctI GAATGC 6 cut(s) 470, 505, 518, 520, 613, 1030
PdmI GAANNNNTTC 3 cut(s) 503, 518, 1064
PfeI GAWTC 4 cut(s) 489, 673, 1407, 1444
PkrI GCNGC 5 cut(s) 58, 239, 733, 919, 1585
PleI GAGTC 3 cut(s) 442, 1387, 1708
PpsI GAGTC 3 cut(s) 442, 1387, 1708
PscI ACATGT 4 cut(s) 119, 222, 1137, 1644
PshBI ATTAAT 1 cut(s) 1487
PsiI TTATAA 1 cut(s) 1469
Psp6I CCWGG 5 cut(s) 16, 372, 759, 1510, 1723
PspFI CCCAGC 1 cut(s) 1676
PspGI CCWGG 5 cut(s) 16, 372, 759, 1510, 1723
PspN4I GGNNCC 4 cut(s) 908, 926, 942, 1729
PspPI GGNCC 2 cut(s) 906, 1215
PstNI CAGNNNCTG 1 cut(s) 1571
PsuI RGATCY 1 cut(s) 1727
PteI GCGCGC 1 cut(s) 414
RruI TCGCGA 1 cut(s) 678
RsaI GTAC 3 cut(s) 118, 833, 1099
RsaNI GTAC 3 cut(s) 117, 832, 1098
RseI CAYNNNNRTG 3 cut(s) 285, 375, 1401
SaqAI TTAA 6 cut(s) 551, 747, 837, 1083, 1487, 1506
SatI GCNGC 5 cut(s) 57, 238, 732, 918, 1584
Sau3AI GATC 4 cut(s) 241, 1195, 1224, 1727
Sau96I GGNCC 2 cut(s) 906, 1215
ScaI AGTACT 1 cut(s) 1099
SchI GAGTC 3 cut(s) 442, 1387, 1709
ScrFI CCNGG 7 cut(s) 18, 374, 761, 922, 1416, 1512, 1725
SduI GDGCHC 2 cut(s) 31, 182
SexAI ACCWGGT 1 cut(s) 1510
SfaNI GCATC 4 cut(s) 68, 870, 1145, 1671
SinI GGWCC 2 cut(s) 906, 1215
SmiMI CAYNNNNRTG 3 cut(s) 285, 375, 1401
SmlI CTYRAG 3 cut(s) 450, 956, 1075
SmoI CTYRAG 3 cut(s) 450, 956, 1075
SpeI ACTAGT 1 cut(s) 1094
SphI GCATGC 2 cut(s) 1437, 1595
SsiI CCGC 5 cut(s) 7, 11, 56, 237, 305
SspMI CTAG 6 cut(s) 485, 1095, 1133, 1254, 1451, 1704
StyD4I CCNGG 7 cut(s) 16, 372, 759, 920, 1414, 1510, 1723
StyI CCWWGG 7 cut(s) 145, 405, 484, 1047, 1069, 1348, 1402
TaaI ACNGT 4 cut(s) 264, 529, 1638, 1673
TaiI ACGT 1 cut(s) 1628
TaqI TCGA 2 cut(s) 710, 1089
TatI WGTACW 2 cut(s) 831, 1097
TauI GCSGC 2 cut(s) 59, 240
TfiI GAWTC 4 cut(s) 489, 673, 1407, 1444
Tru1I TTAA 6 cut(s) 551, 747, 837, 1083, 1487, 1506
Tru9I TTAA 6 cut(s) 551, 747, 837, 1083, 1487, 1506
TscAI CASTG 5 cut(s) 500, 638, 727, 745, 1678
TseI GCWGC 3 cut(s) 731, 917, 1583
TspRI CASTG 5 cut(s) 500, 638, 727, 745, 1678
VpaK11BI GGWCC 2 cut(s) 906, 1215
VspI ATTAAT 1 cut(s) 1487
XapI RAATTY 1 cut(s) 1064
XceI RCATGY 9 cut(s) 123, 226, 429, 1141, 1344, 1437, 1501, 1595, 1648
XcmI CCANNNNNNNNNTGG 1 cut(s) 1225
XmaJI CCTAGG 1 cut(s) 484
XmnI GAANNNNTTC 3 cut(s) 503, 518, 1064
XspI CTAG 6 cut(s) 485, 1095, 1133, 1254, 1451, 1704
ZrmI AGTACT 1 cut(s) 1099
Zsp2I ATGCAT 6 cut(s) 520, 1160, 1342, 1435, 1439, 1597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.