MD14G1245400.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0016305
Physical Location & Seq
Reverse (-)
32344113 .. 32345927
1815 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1245400.v1.1.491

Sequence Viewer

Length: 1785 bp
ATGCTCCGTCCCCGCTCCCGCCCGGGTACTCGCGCTCTTCTTGGATATACATTTACGCTTATCGTATCAAAATCCACACACAACTTGGCCACAGGGGAACAGACTTACTCCGGTTTCTTGCGTTATTGTGCCCAGACCTCTAACTTACCCCATGGCAGAGCACTCCATGCTAAACTCATCAGAGGCCTTCTGCCCTTCTGTCCTTTTCTTCAAAACCATCTACTCAACATGTATGCTAAATGCGGCGATCTTATTAATGCTCTCCAACTGTTTGATGAAATGCCTCACAAGAATGTTGTGTCGTGGTCTGCGGTCATTACGGGCTTTGTCCAACATGACTCTCCTAAGAAAGCCCTGTCTCTGTTTGGTCGTATGCACCGGGACGGCACCACCAAGCCCAATGAGTTTACCTTGGTTAGCGCCCTCCACGCCTGTTCCTTGTATGGGAATCTGACTCAAGCTTACCAAGTCTATGCATTCATCGTTAGGCTAGGATTTGAGTGGAATGTTTTTCTCAGTAATGCGTTTTTGACTGTTTTAGTAAGACATGGAGAATTAAAAAGTGCTTTGGAAGTTTTTGAGAATTGCCTCAATAAAGATATAGTGTCTTGGAATGCTGTGATGGCTGGATACTTGCAGTATTCTTATTTGGAAATACCGACATTCTGGTGTCGCATGAATCTCGAGGGAGTGAAACCCGACAGCTACACATTTTCGAGTGTTCTCACTGGGTTGGCTGCTCTCACTGATCTTAAAATGGGCGAGCAAGTTCATGCACAGCTTGTCAGGTATGGCTATGGGGCTGAGATTTGTGTGGGGAATTCGTTGGCTGATATGTACATTAAGAATCAGAAGTTAATGGAGGGCTTCAAAGCCTTTGATGAAATGCCTTCAAAAGATGTGTGCTCATGGACCCAAATGGCTGCTGGGTGTCTTCAATGTGGGGAGCCAAGGAAAACGCTTGAGGTTATTGATCAAATGAAGAAAGTGGGTATAAAGCCTAACAAGTTCACGCTTGCAACTGCCCTGAATGCCTGTGCCAATTTGGCTTCCTTGGATGAAGGGCAGAAATTCCATGGCTTGAGAATTAAACTCGAAACCAGTACTGATGTTGATGTGTGCGTGGATAACGCTCTGCTAGACATGTATGCAAAATGTGGATGGATGGAGGGTGCAAGGCGTGTTTTTCAGTCAATGAAGGATCCGTCTGTGGTGTCATGGACTGCAATGATCATGGGGTGCGCACAAAACGGGCAAGCTAGGGAAGCTGTTGAGATTTTTGATAAGATGAGGCTGGAGGAAGACAGTATTGAGCCAAATTACATCACCTTCATATGTGTACTCTATGCATGTAGCCAGGGCGGGTTTATTGATGAAGGATGGAAGTATTTTGCCTCCATGACTCATGACCACGGAATCTCCCCAGGAGAAGACCATTATGCATGCATGGTGAATCTTCTAGGCCGAGCAGGATGCATTAAGGAAGCTGAGGAATTAATCCTGAGCATGCCCTTTAAGCCAGGTGTTCTGGTTTGGCAAACTCTTCTTGGTGCTTGCCAGATTCATGGCGATACAGAAACTGGAAAGCGGGCGGCAGAGCATGCGTTAGATATAAACAGAAGGGATCCATCAACGTATGTGCTACTGTCAAACATTTTTGCTGGATTGAGCAATTGGGATGATGTTGGGATGCTTAGGAAACTAATGGAGGCTAGGGATGTGCAGAAAGTGCCAGGATCCAGTTGGATTGAAGTGGAAAAAGGCCAGGCATCATCACCTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

595

Amino Acids

66.23

Weight (kDa)

6.47

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 145 8.9e-07 PPR repeat family
PPR PF01535 100 - 129 1e-05 PPR repeat
PPR_2 PF13041 199 - 246 3.5e-07 PPR repeat family
PPR_2 PF13041 299 - 348 6.7e-08 PPR repeat family
PPR_2 PF13041 402 - 452 2.3e-08 PPR repeat family
PPR_3 PF13812 402 - 451 2.6e-06 Pentatricopeptide repeat domain
PPR PF01535 405 - 431 4.3e-08 PPR repeat
PPR_long PF17177 410 - 504 1.3e-06 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 522 - 584 6.1e-17 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016305)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g12540 FvH4_4g12540
malus_domestica MD14G1245400.v1.1
prunus_persica Prupe.5G243000_v2.0.a1
pyrus_communis pycom14g20640
rosa_chinensis RchiOBHm_Chr4g0411381
rosa_laevigata RLG00000008361
rosa_multiflora Rmu_sc0000629.1_g000021
rosa_roxburghii Rroxscaffold_5G00355960
rosa_rugosa Rorug04G0109600
rosa_samantha Rh4BG164500 Rh4CG179100 Rh4DG162200
rosa_wichuraiana Rw4G013840 Rw4G013940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1243
AccB1I GGYRCC 1 cut(s) 386
AccBSI CCGCTC 1 cut(s) 15
AccII CGCG 1 cut(s) 33
AciI CCGC 7 cut(s) 13, 19, 243, 311, 1362, 1588, 1592
AclWI GGATC 6 cut(s) 1196, 1209, 1619, 1632, 1731, 1744
AcoI YGGCCR 1 cut(s) 87
AcsI RAATTY 2 cut(s) 820, 1070
AfaI GTAC 4 cut(s) 28, 839, 1105, 1341
AfiI CCNNNNNNNGG 1 cut(s) 444
AflIII ACRYGT 2 cut(s) 228, 1143
AgsI TTSAA 5 cut(s) 212, 871, 894, 938, 1751
AjnI CCWGG 5 cut(s) 1356, 1423, 1519, 1732, 1764
AluBI AGCT 6 cut(s) 461, 705, 781, 1259, 1268, 1487
AluI AGCT 6 cut(s) 461, 705, 781, 1259, 1268, 1487
Alw21I GWGCWC 2 cut(s) 163, 908
Alw26I GTCTC 1 cut(s) 363
AlwI GGATC 6 cut(s) 1196, 1209, 1619, 1632, 1731, 1744
AlwNI CAGNNNCTG 1 cut(s) 1580
Ama87I CYCGRG 2 cut(s) 22, 683
AoxI GGCC 4 cut(s) 87, 184, 1462, 1762
ApeKI GCWGC 2 cut(s) 737, 923
ApoI RAATTY 2 cut(s) 820, 1070
AseI ATTAAT 2 cut(s) 255, 1496
AspLEI GCGC 3 cut(s) 35, 422, 1244
AspS9I GGNCC 1 cut(s) 912
AsuC2I CCSGG 3 cut(s) 23, 24, 380
AsuHPI GGTGA 3 cut(s) 1318, 1462, 1767
AvaI CYCGRG 2 cut(s) 22, 683
AvaII GGWCC 1 cut(s) 912
BaeGI GKGCMC 1 cut(s) 133
BalI TGGCCA 1 cut(s) 89
BamHI GGATCC 3 cut(s) 1201, 1624, 1736
BanI GGYRCC 1 cut(s) 386
BbsI GAAGAC 3 cut(s) 926, 1308, 1437
Bbv12I GWGCWC 2 cut(s) 163, 908
BbvCI CCTCAGC 1 cut(s) 1488
BbvI GCAGC 2 cut(s) 724, 910
BccI CCATC 6 cut(s) 225, 616, 1155, 1159, 1374, 1636
BceAI ACGGC 1 cut(s) 400
BcgI CGANNNNNNTGC 4 cut(s) 664, 698, 1455, 1489
BciT130I CCWGG 5 cut(s) 1358, 1425, 1521, 1734, 1766
BciVI GTATCC 1 cut(s) 623
BclI TGATCA 2 cut(s) 973, 1230
BcnI CCSGG 3 cut(s) 23, 24, 380
BcoDI GTCTC 1 cut(s) 363
BfaI CTAG 5 cut(s) 491, 1139, 1260, 1460, 1713
BfoI RGCGCY 1 cut(s) 423
BfuI GTATCC 1 cut(s) 623
BglI GCCNNNNNGGC 1 cut(s) 1046
BisI GCNGC 4 cut(s) 244, 738, 924, 1593
BlsI GCNGC 4 cut(s) 245, 739, 925, 1594
BmcAI AGTACT 1 cut(s) 1105
Bme1390I CCNGG 8 cut(s) 23, 24, 380, 1358, 1425, 1521, 1734, 1766
Bme18I GGWCC 1 cut(s) 912
BmeT110I CYCGRG 2 cut(s) 22, 683
BmgT120I GGNCC 1 cut(s) 912
BmiI GGNNCC 6 cut(s) 388, 914, 948, 1203, 1626, 1738
BmrFI CCNGG 8 cut(s) 23, 24, 380, 1358, 1425, 1521, 1734, 1766
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 3 cut(s) 1463, 1680, 1778
BmuI ACTGGG 1 cut(s) 738
BpiI GAAGAC 3 cut(s) 926, 1308, 1437
BpmI CTGGAG 1 cut(s) 1316
Bpu10I CCTNAGC 3 cut(s) 1488, 1502, 1694
BpuEI CTTGAG 3 cut(s) 441, 983, 1102
BpuMI CCSGG 3 cut(s) 23, 24, 380
BsaJI CCNNGG 9 cut(s) 22, 151, 411, 950, 1053, 1075, 1357, 1411, 1423
BsaWI WCCGGW 1 cut(s) 110
BsaXI ACNNNNNCTCC 2 cut(s) 1403, 1433
Bsc4I CCNNNNNNNGG 1 cut(s) 444
Bse1I ACTGG 4 cut(s) 733, 1101, 1585, 1740
Bse3DI GCAATG 1 cut(s) 1233
BseBI CCWGG 5 cut(s) 1358, 1425, 1521, 1734, 1766
BseDI CCNNGG 9 cut(s) 22, 151, 411, 950, 1053, 1075, 1357, 1411, 1423
BseGI GGATG 8 cut(s) 1063, 1166, 1170, 1385, 1478, 1684, 1695, 1723
BseLI CCNNNNNNNGG 1 cut(s) 444
BseMI GCAATG 1 cut(s) 1233
BseMII CTCAG 4 cut(s) 529, 795, 1479, 1493
BseNI ACTGG 4 cut(s) 733, 1101, 1585, 1740
BseSI GKGCMC 1 cut(s) 133
BseXI GCAGC 2 cut(s) 724, 910
BseYI CCCAGC 1 cut(s) 926
BsgI GTGCAG 1 cut(s) 1742
Bsh1236I CGCG 1 cut(s) 33
BshFI GGCC 4 cut(s) 89, 186, 1464, 1764
BshNI GGYRCC 1 cut(s) 386
BsiHKAI GWGCWC 2 cut(s) 163, 908
BsiHKCI CYCGRG 2 cut(s) 22, 683
BsiSI CCGG 3 cut(s) 23, 111, 379
BslFI GGGAC 1 cut(s) 395
BslI CCNNNNNNNGG 1 cut(s) 444
BsmAI GTCTC 1 cut(s) 363
BsmFI GGGAC 1 cut(s) 395
BsmI GAATGC 3 cut(s) 476, 619, 1036
BsnI GGCC 4 cut(s) 89, 186, 1464, 1764
BsoBI CYCGRG 2 cut(s) 22, 683
Bsp1286I GDGCHC 3 cut(s) 133, 163, 908
Bsp1407I TGTACA 1 cut(s) 837
Bsp143I GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
Bsp19I CCATGG 2 cut(s) 151, 1075
BspACI CCGC 7 cut(s) 13, 19, 243, 311, 1362, 1588, 1592
BspANI GGCC 4 cut(s) 89, 186, 1464, 1764
BspCNI CTCAG 4 cut(s) 528, 796, 1480, 1494
BspFNI CGCG 1 cut(s) 33
BspHI TCATGA 1 cut(s) 1405
BspLI GGNNCC 6 cut(s) 388, 914, 948, 1203, 1626, 1738
BspPI GGATC 6 cut(s) 1196, 1209, 1619, 1632, 1731, 1744
BspQI GCTCTTC 1 cut(s) 42
BspT107I GGYRCC 1 cut(s) 386
BsrBI CCGCTC 1 cut(s) 15
BsrDI GCAATG 1 cut(s) 1233
BsrGI TGTACA 1 cut(s) 837
BsrI ACTGG 4 cut(s) 733, 1101, 1585, 1740
BssECI CCNNGG 9 cut(s) 22, 151, 411, 950, 1053, 1075, 1357, 1411, 1423
BssMI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
BssT1I CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
Bst2UI CCWGG 5 cut(s) 1358, 1425, 1521, 1734, 1766
Bst4CI ACNGT 4 cut(s) 270, 535, 1307, 1647
Bst6I CTCTTC 2 cut(s) 42, 1548
BstAPI GCANNNNNTGC 3 cut(s) 167, 1601, 1729
BstAUI TGTACA 1 cut(s) 837
BstC8I GCNNGC 8 cut(s) 764, 1017, 1257, 1444, 1508, 1555, 1590, 1602
BstDEI CTNAG 6 cut(s) 345, 515, 804, 1488, 1502, 1694
BstDSI CCRYGG 3 cut(s) 151, 1075, 1411
BstF5I GGATG 8 cut(s) 1063, 1166, 1170, 1385, 1478, 1684, 1695, 1723
BstFNI CGCG 1 cut(s) 33
BstH2I RGCGCY 1 cut(s) 423
BstHHI GCGC 3 cut(s) 35, 422, 1244
BstKTI GATC 7 cut(s) 250, 751, 976, 1204, 1233, 1627, 1739
BstMAI GTCTC 1 cut(s) 363
BstMBI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
BstMWI GCNNNNNNNGC 9 cut(s) 167, 428, 623, 1031, 1046, 1265, 1516, 1601, 1729
BstNI CCWGG 5 cut(s) 1358, 1425, 1521, 1734, 1766
BstNSI RCATGY 6 cut(s) 232, 1147, 1353, 1446, 1510, 1604
BstSCI CCNGG 8 cut(s) 21, 22, 378, 1356, 1423, 1519, 1732, 1764
BstSLI GKGCMC 1 cut(s) 133
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 2 cut(s) 724, 910
BstV2I GAAGAC 3 cut(s) 926, 1308, 1437
BstX2I RGATCY 3 cut(s) 1201, 1624, 1736
BstXI CCANNNNNNTGG 1 cut(s) 1565
BstYI RGATCY 3 cut(s) 1201, 1624, 1736
BsuI GTATCC 1 cut(s) 623
BsuRI GGCC 4 cut(s) 89, 186, 1464, 1764
BtgI CCRYGG 3 cut(s) 151, 1075, 1411
BtsCI GGATG 8 cut(s) 1063, 1166, 1170, 1385, 1478, 1684, 1695, 1723
BtsIMutI CAGTG 2 cut(s) 726, 744
Cac8I GCNNGC 8 cut(s) 764, 1017, 1257, 1444, 1508, 1555, 1590, 1602
CaiI CAGNNNCTG 1 cut(s) 1580
CciI TCATGA 1 cut(s) 1405
CfoI GCGC 3 cut(s) 35, 422, 1244
Cfr13I GGNCC 1 cut(s) 912
Cfr9I CCCGGG 1 cut(s) 22
Csp6I GTAC 4 cut(s) 27, 838, 1104, 1340
CviQI GTAC 4 cut(s) 27, 838, 1104, 1340
DdeI CTNAG 6 cut(s) 345, 515, 804, 1488, 1502, 1694
DpnI GATC 7 cut(s) 249, 750, 975, 1203, 1232, 1626, 1738
DpnII GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
EaeI YGGCCR 1 cut(s) 87
Eam1104I CTCTTC 2 cut(s) 42, 1548
EarI CTCTTC 2 cut(s) 42, 1548
Eco130I CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
Eco147I AGGCCT 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 912
Eco88I CYCGRG 2 cut(s) 22, 683
EcoRI GAATTC 1 cut(s) 820
EcoRII CCWGG 5 cut(s) 1356, 1423, 1519, 1732, 1764
EcoT14I CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
EcoT22I ATGCAT 5 cut(s) 478, 1351, 1444, 1448, 1478
ErhI CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
FaqI GGGAC 1 cut(s) 395
FauI CCCGC 4 cut(s) 20, 26, 1355, 1581
FauNDI CATATG 1 cut(s) 1334
FbaI TGATCA 2 cut(s) 973, 1230
Fnu4HI GCNGC 4 cut(s) 244, 738, 924, 1593
FokI GGATG 8 cut(s) 1070, 1173, 1177, 1392, 1485, 1691, 1702, 1730
Fsp4HI GCNGC 4 cut(s) 244, 738, 924, 1593
FspAI RTGCGCAY 1 cut(s) 1243
FspBI CTAG 5 cut(s) 491, 1139, 1260, 1460, 1713
FspI TGCGCA 1 cut(s) 1243
GlaI GCGC 3 cut(s) 34, 421, 1243
GluI GCNGC 4 cut(s) 244, 738, 924, 1593
GsaI CCCAGC 1 cut(s) 930
GsuI CTGGAG 1 cut(s) 1316
HaeII RGCGCY 1 cut(s) 423
HaeIII GGCC 4 cut(s) 89, 186, 1464, 1764
HapII CCGG 3 cut(s) 23, 111, 379
HhaI GCGC 3 cut(s) 35, 422, 1244
Hin6I GCGC 3 cut(s) 33, 420, 1242
HinP1I GCGC 3 cut(s) 33, 420, 1242
HindIII AAGCTT 1 cut(s) 459
HinfI GANTC 9 cut(s) 338, 448, 454, 679, 847, 1402, 1416, 1453, 1561
HpaII CCGG 3 cut(s) 23, 111, 379
HphI GGTGA 3 cut(s) 1318, 1462, 1767
Hpy166II GTNNAC 3 cut(s) 408, 1011, 1340
Hpy188I TCNGA 3 cut(s) 182, 453, 852
Hpy188III TCNNGA 3 cut(s) 683, 1406, 1501
Hpy8I GTNNAC 3 cut(s) 408, 1011, 1340
HpyAV CCTTC 8 cut(s) 197, 205, 900, 1055, 1192, 1339, 1370, 1614
HpyCH4III ACNGT 4 cut(s) 270, 535, 1307, 1647
HpyCH4IV ACGT 1 cut(s) 1634
HpyF10VI GCNNNNNNNGC 9 cut(s) 167, 428, 623, 1031, 1046, 1265, 1516, 1601, 1729
HpyF3I CTNAG 6 cut(s) 345, 515, 804, 1488, 1502, 1694
HpySE526I ACGT 1 cut(s) 1634
HspAI GCGC 3 cut(s) 33, 420, 1242
Ksp22I TGATCA 2 cut(s) 973, 1230
Kzo9I GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 3 cut(s) 9, 20, 946
Lsp1109I GCAGC 2 cut(s) 724, 910
LweI GCATC 3 cut(s) 1463, 1680, 1778
MaeI CTAG 5 cut(s) 491, 1139, 1260, 1460, 1713
MaeII ACGT 1 cut(s) 1634
MalI GATC 7 cut(s) 249, 750, 975, 1203, 1232, 1626, 1738
MbiI CCGCTC 1 cut(s) 15
MboI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
MboII GAAGA 8 cut(s) 29, 200, 926, 994, 1313, 1442, 1448, 1535
MfeI CAATTG 1 cut(s) 1672
MflI RGATCY 3 cut(s) 1201, 1624, 1736
MhlI GDGCHC 3 cut(s) 133, 163, 908
MlsI TGGCCA 1 cut(s) 89
MluCI AATT 9 cut(s) 554, 583, 820, 1042, 1070, 1086, 1318, 1493, 1672
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 3 cut(s) 332, 448, 1396
MmeI TCCRAC 3 cut(s) 289, 355, 1724
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 5 cut(s) 478, 1351, 1444, 1448, 1478
MscI TGGCCA 1 cut(s) 89
MseI TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
MslI CAYNNNNRTG 2 cut(s) 291, 667
Msp20I TGGCCA 1 cut(s) 89
MspI CCGG 3 cut(s) 23, 111, 379
MspR9I CCNGG 8 cut(s) 23, 24, 380, 1358, 1425, 1521, 1734, 1766
MunI CAATTG 1 cut(s) 1672
Mva1269I GAATGC 3 cut(s) 476, 619, 1036
MvaI CCWGG 5 cut(s) 1358, 1425, 1521, 1734, 1766
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 9 cut(s) 167, 428, 623, 1031, 1046, 1265, 1516, 1601, 1729
NciI CCSGG 3 cut(s) 23, 24, 380
NcoI CCATGG 2 cut(s) 151, 1075
NdeI CATATG 1 cut(s) 1334
NdeII GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
NlaIV GGNNCC 6 cut(s) 388, 914, 948, 1203, 1626, 1738
NmeAIII GCCGAG 1 cut(s) 1490
NsbI TGCGCA 1 cut(s) 1243
NsiI ATGCAT 5 cut(s) 478, 1351, 1444, 1448, 1478
NspI RCATGY 6 cut(s) 232, 1147, 1353, 1446, 1510, 1604
PaeI GCATGC 3 cut(s) 1446, 1510, 1604
PaeR7I CTCGAG 1 cut(s) 683
PagI TCATGA 1 cut(s) 1405
PceI AGGCCT 1 cut(s) 186
PciI ACATGT 2 cut(s) 228, 1143
PciSI GCTCTTC 1 cut(s) 42
PctI GAATGC 3 cut(s) 476, 619, 1036
PfeI GAWTC 6 cut(s) 448, 679, 847, 1416, 1453, 1561
PkrI GCNGC 4 cut(s) 245, 739, 925, 1594
PleI GAGTC 3 cut(s) 332, 448, 1396
PpsI GAGTC 3 cut(s) 332, 448, 1396
PscI ACATGT 2 cut(s) 228, 1143
PshBI ATTAAT 2 cut(s) 255, 1496
Psp6I CCWGG 5 cut(s) 1356, 1423, 1519, 1732, 1764
PspFI CCCAGC 1 cut(s) 926
PspGI CCWGG 5 cut(s) 1356, 1423, 1519, 1732, 1764
PspN4I GGNNCC 6 cut(s) 388, 914, 948, 1203, 1626, 1738
PspPI GGNCC 1 cut(s) 912
PstNI CAGNNNCTG 1 cut(s) 1580
PsuI RGATCY 3 cut(s) 1201, 1624, 1736
RsaI GTAC 4 cut(s) 28, 839, 1105, 1341
RsaNI GTAC 4 cut(s) 27, 838, 1104, 1340
RseI CAYNNNNRTG 2 cut(s) 291, 667
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
SatI GCNGC 4 cut(s) 244, 738, 924, 1593
Sau3AI GATC 7 cut(s) 247, 748, 973, 1201, 1230, 1624, 1736
Sau96I GGNCC 1 cut(s) 912
ScaI AGTACT 1 cut(s) 1105
SchI GAGTC 3 cut(s) 332, 448, 1396
ScrFI CCNGG 8 cut(s) 23, 24, 380, 1358, 1425, 1521, 1734, 1766
SduI GDGCHC 3 cut(s) 133, 163, 908
SfaNI GCATC 3 cut(s) 1463, 1680, 1778
Sfr274I CTCGAG 1 cut(s) 683
SinI GGWCC 1 cut(s) 912
SlaI CTCGAG 1 cut(s) 683
SmaI CCCGGG 1 cut(s) 24
SmiMI CAYNNNNRTG 2 cut(s) 291, 667
SmlI CTYRAG 4 cut(s) 456, 683, 962, 1081
SmoI CTYRAG 4 cut(s) 456, 683, 962, 1081
SphI GCATGC 3 cut(s) 1446, 1510, 1604
Sse9I AATT 9 cut(s) 554, 583, 820, 1042, 1070, 1086, 1318, 1493, 1672
SseBI AGGCCT 1 cut(s) 186
SsiI CCGC 7 cut(s) 13, 19, 243, 311, 1362, 1588, 1592
SspMI CTAG 5 cut(s) 491, 1139, 1260, 1460, 1713
StuI AGGCCT 1 cut(s) 186
StyD4I CCNGG 8 cut(s) 21, 22, 378, 1356, 1423, 1519, 1732, 1764
StyI CCWWGG 5 cut(s) 151, 411, 950, 1053, 1075
TaaI ACNGT 4 cut(s) 270, 535, 1307, 1647
TaiI ACGT 1 cut(s) 1637
TaqI TCGA 3 cut(s) 684, 716, 1095
TasI AATT 9 cut(s) 554, 583, 820, 1042, 1070, 1086, 1318, 1493, 1672
TatI WGTACW 3 cut(s) 837, 1103, 1339
TauI GCSGC 2 cut(s) 246, 1595
TfiI GAWTC 6 cut(s) 448, 679, 847, 1416, 1453, 1561
Tru1I TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
Tru9I TTAA 9 cut(s) 255, 557, 753, 843, 857, 1089, 1479, 1496, 1515
TscAI CASTG 2 cut(s) 733, 751
TseI GCWGC 2 cut(s) 737, 923
TspGWI ACGGA 2 cut(s) 1194, 1428
TspMI CCCGGG 1 cut(s) 22
TspRI CASTG 2 cut(s) 733, 751
VpaK11BI GGWCC 1 cut(s) 912
VspI ATTAAT 2 cut(s) 255, 1496
XapI RAATTY 2 cut(s) 820, 1070
XceI RCATGY 6 cut(s) 232, 1147, 1353, 1446, 1510, 1604
XcmI CCANNNNNNNNNTGG 3 cut(s) 82, 923, 1740
XhoI CTCGAG 1 cut(s) 683
XmaI CCCGGG 1 cut(s) 22
XspI CTAG 5 cut(s) 491, 1139, 1260, 1460, 1713
ZrmI AGTACT 1 cut(s) 1105
Zsp2I ATGCAT 5 cut(s) 478, 1351, 1444, 1448, 1478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.