Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0015983

Physical Location & Seq

Genomic Coordinates Forward (+)

24329743 .. 24337088

Gene Structure 7346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g21250.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4902 bp

ATGGCCCACCAAATGTGCTTCGACTGCCTCCAGCGCCGGGTTGAGTCCGAGTTCTCCGGCAAACTCGCCTTCATCCACGCTCTCTCCGATTCCGCTTTCCCCTTCGGCTCAAACGCCGTCGTTCAGTTGTCTGCTTCAAATGGAGAAGCTGCTGCTTCAGCTCCTCAGTTCTTGCTCAAGTATCTACCAAGTGATGACCAGGATTGCCTGACCAAATTTGTTAATGAGTATAGCCTGGATGATGGTGATGTGAGTCGAGATGAGGAAGATGTCGGTTTATCAAATGGTGGCAAAGCATTGCCGCAGAGTTCAAAGTGTGATCATTCGAGTAGGTTTTCTTGCTCGAGGGTGATCAGTGCGTTGGCACCGGTTACTGAAGTTGGCTTTTCTTCAGATTCTATTGAGGAGCTTGCTTCCAGCTTTTTGTCCGGGTCTATGGAAGATCACATATTGAATTCGCTTAGTCTCTTGATTGAGGGGAAAGCTTCGGGAAGAGATAGTGTCAACTTTCTTAATTTACTTGGGGTACCATCGTTTGATGAGAATCCGTTTCCTGGCTCCTTGAGGCATCCGAATATAGCTCCCATACTTGGGATGGTTAAGACATCTGGTTATGTTGATGTAGTTCTTCCTAAAGCTCCATATACCTTGGAAAACATTCTCCATTATAGCCCTGATGCGCTAAAGTCTGATTGGCATATAAGGTTTCTAGTATATCAGTTACTCTCAGCTCTAGCTTATATTCATGGTTTAGGGGCTGCTCATGGAAACATATGTCCTTCCAGTGTAATGCTTACTGAGTCATGCTGGTCTTGGCTGTGTGTATGTGATAAGCCTGGGGTAGGATTTAATTCAAGTTCAAGAGGTAATGGGTGTACAATTACTGAGCCCGAAAAGGTAGGTTGTTCTTTACCAGGTTGTCCCTCTCAAGGTCTTTATGCTGATTTAAAGCTTTCCTCATCTATAGACTGGCAACGGGACTTTAATCAGTGGTGGAGGGGAGAGATTAGTAATTTTGAATATCTACTCATCTTGAATAGATTAGCTGGGAGAAGGTGGGGCGATCACACATTTCATACAGTGATGCCATGGGTTATAGATTTTAGTACCAAACCTGATGAGAATTCTGACACAGGGTGGCGGGATTTGAGTAAGAGTAAATGGAGGTTGGCTAAAGGTGATGAACAGTTGGACTTCACCTATTCAACATCGGAGTTCCCACATCATGTTTCTGATGAATGTCTTTCTGAATTGGCTGTCTGCAGCTATAAAGCAAGGAGGTTGCCTTTGAGTGTTCTACGTATGGCTGTGCGCTCAGTCTATGAACCTAATGAATATCCTTCTACAATGCAAAGACTCTATCAATGGACCCCTGATGAGTGCATTCCAGAGTTTTACTGCGATCCCCAAGTTTTCAGTTCACTTCATGCTGGTATGACTGACTTGGCTGTACCTTCATGGGCAGGTGGTCCTGAGGAATTCATCAAATTGCATTGTGAAGCATTAGAAAGCGATCGCGTCTCATGCCAACTTCATCACTGGATTGATATCACCTTTGGTTACAAAATGTCTGGTCAGGCAGCTGTTGCAGCAAAGAATGTAATGCTCCCTTCTTCAGAGTCCATGATGCCGAGGTCAGCAGGACGCCGTCAGCTTTTTACTGAACCTCATCCTATGCGTCGAGGTGCAATACGGAAGCCGGGTGATAGCACCAATGAGTCAGCTTCGTATCTAGGAAAAATTAATGAATTAAGGAGCGAAAGTTCTGTCCTCTCTGACACGGCTTATTTGCAAGTATTAGAAGATGCATCAGCCTTTTGCGAACATGCTATGGAATTGAGTGCCCTCTATGGGTACCATCTTGAATCTGGCAAGTACATTGCTCCTGTAGAAGAACAATCAAGTGAGAATGTTAAGAAAATTATACCTCAATCATCTGACACTAAGGAACACCAGCAGTTGCCATTACAAATTGATACAAATTATCTTCTTGAGCATATTAAGGTGGAGGATGAGGGCTCCACAGGATATCAAGAGCTATTGCTTTGGAGGCATAAATCATCTTGTTCGAAGACATTTTCTGAAGATGTTGCAAGGGACATATTTTCTATTGGTTGTCTCTTAGCAGAACTTCACTTGAGGAGGCCACTTTTCAATCCAGCGTCATTGTCCATGTACTTGGACAGCGGTCTCTTACCTGGACCAGTGCATGAACTTCCTCCTCACACCAAATTACTAGTTGAAGCATGCATTCAAAAGGATTGCATGAGGAGGCCATCAGCCAAGTCTCTTTTGGAATCACCTTACTTTCCTTCTACAGTCAAGGCATCCTACTTGTTTCTTGCCCCACTCCATCTTCGGGCTAAAGATGGATCCTGCCTCCATTATGCTGCAAACTTTGCGAAGCAAGGAGTCCTCAAGGCAATGGGAATGTTTGCAGCTGAAATGTGTGCTCCTTTCTGCTTATCGCTTGTGGTGACTCCTTTGTCAGATACTGAAGCAGAATGGGCTTATACACTCTTAAAAGAATTTATTAAAAGTTTGACACCTAAAGCAGTAAAGACAATAGTCTTGCCTGCCATCCAGAGAATTTTACAGACTACAGGTTATTCACATCTAAAGGTTTCTATCCTGCAAGACTCATTTGTTCAAGAGATATGGAATCGAGTTGGCAAACAAGCATTTCTCAAAACCGTACATCCTCTTGTAATATTGAACTTGAATGCTGCTGCTCATAAGAGTTCAGCTGCTGCTGCTTCCGTGCTGCTGCTTGGCTCAAGTGAAGAGCTTGGTATACCTATTACTATTCATCAGACAATCCTGCCATTGATCCAATGCTTTGGGAAAGGTCTAAGTACTGATGGACTTGATGTGCTGGTTCGAATTGGTGGTCTGTTAGGGGAAAGCTTCATTGTCAGACAGATGCTACCGTTGCTAAAACATGTAATTCGTTCGTGCATTGACATTTCACGTATGAATAAGCCTGAGCCTGTCCACAGCTGGACCGCTTTCGCTCTTATTGATTCTTTAATGACAATAGATGGCCTGGTTGCATTCTTACCAAGGGAGGTGGTTGTAAAGGAGCTAATTGAAGATAAAAGATGCCTGCATGTTCCGGTTCTTATGCAGACAAGTTTTGAACATAGAGTGGTTCAGGTTGCTGCCACAACCCTAATGGCTGTTTGTCAGCGTATAGGACCAGATATGACGGCATTACATGTTTTGCCACAACTAAAGGAGCTATTTGATGAGCTTGCTTTCTCACCAGAAACTGCTAATGCATCTACTTCCCCTGGCAGAAAGTCAAAGATTTTAAAGCTAAAGGATGGGGTTGTGATTGAAAGTCGTATGGACCTTGCGTTGCTTCTGTATCCTCCTTTTGCGTCCCTTCTTGGGATAGAGAAGCTTCGGCAGTGTTGTGCAACATGGTTATTACTTGAGCGATATCTTTTACGATTTCATAATTGGAAGTGGGAACACACAGGAGAATTGTCTCGAAGTGGTTCAGACACTATACTCAATAACAGAGCATACAGAAAGGGCTCAACTCCTGAATACAGTCCTGCTAAGCTGTTGCTAAATGGGGTTGGATGGTCAATTCCGCAATCGCAAGGAACTAGAGGAGCCAAAAACTTGATGCCTCAGAAAAGGTCTGACGCAGTGCATCAGAGTCCAACCGAAATGCATGCAGCAACAGCATCAAATTATAAATATGAGCCCTGGTTTTGGTTCCCTAGTCCTGCTGCTAGCTGGGATGGGCCTGATTTTCTTGGGCGTGGTGGAGGTGTGAAAGATGAACATCCATGGAAGATCAGAGCATCTGTGATACACTCCGTCCGTGCGCATCCTGGAGCCTTAAGATATTTAGCCGTCTGCCCAGATGAATCCACGGTTTTTACTGCAGGGATTGGTGCAGGCTTCAGAGGAACTGTTCAGAAATGGGAGCTGAGTAGAATTAATTGTGTATCTGGATACTACGGCCATGAAGAGGTTGTGAACGACATTTGCGTCTTGTCGTCTAGTGGGAGAGTTGCATCCTGTGACGGAACAATACATGTCTGGAATAGCCGAACAGGGAAATTAATTTCAGTATTTTCTGAACCATCAGTGGATTCTGCACATATTGCAAGCCTCCCATCTTCTTCCTCTAGGGCTAATGTTGACCACAGTAATATGCTCAGTCCCAATACAATGTCCAGTGGAATATTGACTGGTGCATTTGATGGGAGCCTGTATACCTGTATGCATCAGACTGAGTTTGGTGAAACACTTGTTGCTGGCACTGGAAATGGTTCTTTGAGGTTCATTGATGTTGTCGGAGGACAAAAGCTGCATCTTTGGAGGGGGGATTATCTGGAGTCAGGCTTTCCTTCTATTGTTTCTACCATATGCTCTTGTGGGTCTGACAAAATGCAACCAGATGGAGCTTCTTCACCATCTTGGATTGCAGCTGGAATGAGTTCTGGCCATTGTAGGTTATTTGATGCAAGGAGTGGAAATGTTATTTCCTCTTGGCGGGCTCATGATGGATATATTACAAAGTTGGCTGCACCGGAAGACCATTTGGTTTTGTCCAGCTCTCTTGACAAGACTCTAAGGATTTGGGACTTGAGGAGGAATGTGCCATCTCAGCCCACAATTCTTAGAGGTCATACTGATGGTATATCTGCTTTCTCTGTATGGGGCCAAGATATTATTTCAATTGCCAGAAACAAAATTGGACTCTCTTCTTTATCTATATCCCCTGATGATGATGGACAGCACGCCGTTACATGTCAAAAGCTCTACATGGCAGATCACGGAGCAAGAAACTTCTCAGTGTTATCAAGTATAAGCATTTTACCCTTCTCAAGATTGTTCCTGGTTGGGACAGAAGATGGTTACTTAAAATTATGTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006955 GO:0007034 GO:0008104 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0015031 GO:0015833 GO:0031461 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042742 GO:0042886 GO:0043207 GO:0044424 GO:0044464 GO:0045087 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0098542 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beach Pkinase WD40

Protein Analysis

1634

Amino Acids

179.94

Weight (kDa)

6.17

Isoelectric Point (pI)

51.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beach	PF02138	329 - 539	4.2e-40	Beige/BEACH domain
Beta-prop_WDR36-Utp21_1st	PF25171	1344 - 1535	4.7e-06	WDR36/Utp21 first beta-propeller
WD40_Prp19	PF24814	1465 - 1540	6.2e-06	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	1479 - 1564	5.5e-08	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18525
fragaria_vesca	FvH4_4g21250 FvH4_4g21250
malus_domestica	MD13G1143700.v1.1
prunus_persica	Prupe.1G108200_v2.0.a1
pyrus_communis	pycom13g12460
rosa_chinensis	RchiOBHm_Chr4g0426871
rosa_laevigata	RLG00000007272
rosa_multiflora	Rmu_sc0000953.1_g000015
rosa_roxburghii	Rroxscaffold_5G00368840
rosa_samantha	Rh4AG270500 Rh4BG276800 Rh4CG291500 Rh4DG274000
rosa_wichuraiana	Rw4G023470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3708
AarI	CACCTGC	1 cut(s)	1454
AasI	GACNNNNNNGTC	2 cut(s)	2485, 4007
Acc16I	TGCGCA	1 cut(s)	3843
Acc36I	ACCTGC	1 cut(s)	1454
Acc65I	GGTACC	2 cut(s)	526, 1854
AccB1I	GGYRCC	3 cut(s)	364, 526, 1854
AccI	GTMKAC	2 cut(s)	2794, 4235
AccII	CGCG	1 cut(s)	1518
AciI	CCGC	7 cut(s)	93, 302, 1141, 2187, 3006, 3602, 4516
AclWI	GGATC	4 cut(s)	1397, 2367, 2380, 2824
AcoI	YGGCCR	2 cut(s)	3979, 4465
AcsI	RAATTY	6 cut(s)	215, 454, 1123, 1478, 2528, 2589
AcuI	CTGAAG	7 cut(s)	141, 375, 396, 1599, 2103, 2517, 3904
AcyI	GRCGYC	1 cut(s)	1645
AdeI	CACNNNGTG	1 cut(s)	1137
AfaI	GTAC	9 cut(s)	528, 877, 1108, 1452, 1856, 1877, 2177, 2697, 2857
AflII	CTTAAG	1 cut(s)	3856
AflIII	ACRYGT	4 cut(s)	2941, 3217, 4054, 4772
AgeI	ACCGGT	1 cut(s)	367
AhlI	ACTAGT	1 cut(s)	2236
AloI	GAACNNNNNNTCC	2 cut(s)	1747, 1779
Alw21I	GWGCWC	1 cut(s)	2455
Alw26I	GTCTC	6 cut(s)	470, 1525, 2123, 2195, 2292, 3498
AlwI	GGATC	4 cut(s)	1397, 2367, 2380, 2824
AlwNI	CAGNNNCTG	3 cut(s)	2495, 2750, 3272
Ama87I	CYCGRG	1 cut(s)	343
AoxI	GGCC	8 cut(s)	3, 2144, 2273, 3043, 3758, 3979, 4465, 4684
ApoI	RAATTY	6 cut(s)	215, 454, 1123, 1478, 2528, 2589
ArsI	GACNNNNNNTTYG	4 cut(s)	1752, 1784, 2875, 2907
AseI	ATTAAT	3 cut(s)	1743, 3957, 4082
AsiGI	ACCGGT	1 cut(s)	367
AsiSI	GCGATCGC	1 cut(s)	1516
Asp700I	GAANNNNTTC	4 cut(s)	657, 3502, 4291, 4459
Asp718I	GGTACC	2 cut(s)	526, 1854
AspLEI	GCGC	4 cut(s)	36, 682, 1314, 3844
AspS9I	GGNCC	9 cut(s)	4, 1368, 1469, 2201, 3003, 3197, 3352, 3758, 4684
AsuC2I	CCSGG	3 cut(s)	38, 430, 1701
AsuII	TTCGAA	2 cut(s)	2069, 2881
AsuNHI	GCTAGC	1 cut(s)	3746
AvaI	CYCGRG	1 cut(s)	343
AvaII	GGWCC	6 cut(s)	1368, 1469, 2201, 3003, 3197, 3352
AxyI	CCTNAGG	1 cut(s)	1473
BaeGI	GKGCMC	1 cut(s)	1846
BaeI	ACNNNNGTAYC	2 cut(s)	518, 551
BalI	TGGCCA	1 cut(s)	4467
BamHI	GGATCC	1 cut(s)	2372
BanI	GGYRCC	3 cut(s)	364, 526, 1854
BanII	GRGCYC	5 cut(s)	891, 2021, 3545, 3720, 4522
BbsI	GAAGAC	2 cut(s)	2078, 4563
Bbv12I	GWGCWC	1 cut(s)	2455
BceAI	ACGGC	7 cut(s)	101, 1632, 1797, 3225, 3854, 3994, 4751
BcgI	CGANNNNNNTGC	2 cut(s)	3668, 3702
BciVI	GTATCC	2 cut(s)	3381, 3965
BclI	TGATCA	2 cut(s)	319, 351
BcnI	CCSGG	3 cut(s)	38, 430, 1701
BcoDI	GTCTC	6 cut(s)	470, 1525, 2123, 2195, 2292, 3498
BcuI	ACTAGT	1 cut(s)	2236
BfaI	CTAG	9 cut(s)	710, 734, 1733, 2237, 3618, 3735, 3747, 4020, 4149
BfmI	CTRYAG	6 cut(s)	963, 1261, 1887, 2316, 2601, 3900
BfoI	RGCGCY	1 cut(s)	37
BfrI	CTTAAG	1 cut(s)	3856
BfuAI	ACCTGC	1 cut(s)	1454
BfuI	GTATCC	2 cut(s)	3381, 3965
BlpI	GCTNAGC	1 cut(s)	3567
BmcAI	AGTACT	1 cut(s)	2857
Bme18I	GGWCC	6 cut(s)	1368, 1469, 2201, 3003, 3197, 3352
BmeT110I	CYCGRG	1 cut(s)	343
BmgT120I	GGNCC	9 cut(s)	4, 1368, 1469, 2201, 3003, 3197, 3352, 3758, 4684
BmtI	GCTAGC	1 cut(s)	3750
BoxI	GACNNNNGTC	2 cut(s)	2187, 2567
BpiI	GAAGAC	2 cut(s)	2078, 4563
BpmI	CTGGAG	3 cut(s)	14, 3870, 4376
Bpu10I	CCTNAGC	1 cut(s)	2985
Bpu1102I	GCTNAGC	1 cut(s)	3567
Bpu14I	TTCGAA	2 cut(s)	2069, 2881
BpuMI	CCSGG	3 cut(s)	38, 430, 1701
BsaAI	YACGTR	2 cut(s)	1301, 2972
BsaBI	GATNNNNATC	3 cut(s)	543, 1547, 3798
BsaHI	GRCGYC	1 cut(s)	1645
BsaI	GGTCTC	1 cut(s)	2195
BsaJI	CCNNGG	9 cut(s)	648, 836, 1088, 1631, 3062, 3292, 3719, 3803, 3888
BsaWI	WCCGGW	3 cut(s)	367, 3115, 4552
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 1747, 1777
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	7 cut(s)	783, 974, 1544, 2204, 4197, 4216, 4288
Bse21I	CCTNAGG	1 cut(s)	1473
Bse3DI	GCAATG	3 cut(s)	296, 1878, 2430
Bse8I	GATNNNNATC	3 cut(s)	543, 1547, 3798
BseDI	CCNNGG	9 cut(s)	648, 836, 1088, 1631, 3062, 3292, 3719, 3803, 3888
BseJI	GATNNNNATC	3 cut(s)	543, 1547, 3798
BseMI	GCAATG	3 cut(s)	296, 1878, 2430
BseNI	ACTGG	7 cut(s)	783, 974, 1544, 2204, 4197, 4216, 4288
BseRI	GAGGAG	7 cut(s)	153, 419, 2155, 2211, 2284, 3636, 4627
BseSI	GKGCMC	1 cut(s)	1846
BseYI	CCCAGC	2 cut(s)	1046, 3750
BsgI	GTGCAG	3 cut(s)	3933, 4101, 4533
Bsh1236I	CGCG	1 cut(s)	1518
Bsh1285I	CGRYCG	1 cut(s)	1516
BshFI	GGCC	8 cut(s)	5, 2146, 2275, 3045, 3760, 3981, 4467, 4686
BshNI	GGYRCC	3 cut(s)	364, 526, 1854
BshTI	ACCGGT	1 cut(s)	367
BsiEI	CGRYCG	1 cut(s)	1516
BsiHKAI	GWGCWC	1 cut(s)	2455
BsiHKCI	CYCGRG	1 cut(s)	343
BsiSI	CCGG	7 cut(s)	37, 57, 368, 429, 1700, 3116, 4553
BslFI	GGGAC	7 cut(s)	906, 992, 2111, 3370, 4167, 4619, 4882
BsmAI	GTCTC	6 cut(s)	470, 1525, 2123, 2195, 2292, 3498
BsmBI	CGTCTC	1 cut(s)	1525
BsmFI	GGGAC	7 cut(s)	906, 992, 2111, 3370, 4167, 4619, 4882
BsmI	GAATGC	4 cut(s)	1383, 2250, 2728, 3053
BsnI	GGCC	8 cut(s)	5, 2146, 2275, 3045, 3760, 3981, 4467, 4686
Bso31I	GGTCTC	1 cut(s)	2195
BsoBI	CYCGRG	1 cut(s)	343
Bsp119I	TTCGAA	2 cut(s)	2069, 2881
Bsp1286I	GDGCHC	7 cut(s)	891, 1846, 2021, 2455, 3545, 3720, 4522
Bsp1407I	TGTACA	1 cut(s)	875
Bsp1720I	GCTNAGC	1 cut(s)	3567
Bsp19I	CCATGG	2 cut(s)	1088, 3803
BspACI	CCGC	7 cut(s)	93, 302, 1141, 2187, 3006, 3602, 4516
BspANI	GGCC	8 cut(s)	5, 2146, 2275, 3045, 3760, 3981, 4467, 4686
BspFNI	CGCG	1 cut(s)	1518
BspHI	TCATGA	1 cut(s)	4522
BspMAI	CTGCAG	2 cut(s)	1265, 3904
BspMI	ACCTGC	1 cut(s)	1454
BspOI	GCTAGC	1 cut(s)	3750
BspPI	GGATC	4 cut(s)	1397, 2367, 2380, 2824
BspQI	GCTCTTC	1 cut(s)	2778
BspT104I	TTCGAA	2 cut(s)	2069, 2881
BspT107I	GGYRCC	3 cut(s)	364, 526, 1854
BspTI	CTTAAG	1 cut(s)	3856
BspTNI	GGTCTC	1 cut(s)	2195
BsrDI	GCAATG	3 cut(s)	296, 1878, 2430
BsrFI	RCCGGY	1 cut(s)	367
BsrGI	TGTACA	1 cut(s)	875
BsrI	ACTGG	7 cut(s)	783, 974, 1544, 2204, 4197, 4216, 4288
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	9 cut(s)	648, 836, 1088, 1631, 3062, 3292, 3719, 3803, 3888
BssNAI	GTATAC	2 cut(s)	2795, 4236
BssNI	GRCGYC	1 cut(s)	1645
BssT1I	CCWWGG	4 cut(s)	648, 1088, 3062, 3803
Bst1107I	GTATAC	2 cut(s)	2795, 4236
Bst4CI	ACNGT	9 cut(s)	1081, 1188, 2320, 2695, 2931, 3560, 3892, 3931, 4169
Bst6I	CTCTTC	4 cut(s)	487, 2778, 3981, 4732
BstACI	GRCGYC	1 cut(s)	1645
BstAFI	CTTAAG	1 cut(s)	3856
BstAPI	GCANNNNNTGC	3 cut(s)	1586, 2399, 4124
BstAUI	TGTACA	1 cut(s)	875
BstBAI	YACGTR	2 cut(s)	1301, 2972
BstBI	TTCGAA	2 cut(s)	2069, 2881
BstDSI	CCRYGG	3 cut(s)	1088, 3803, 3888
BstENI	CCTNNNNNAGG	1 cut(s)	840
BstFNI	CGCG	1 cut(s)	1518
BstH2I	RGCGCY	1 cut(s)	37
BstHHI	GCGC	4 cut(s)	36, 682, 1314, 3844
BstMAI	GTCTC	6 cut(s)	470, 1525, 2123, 2195, 2292, 3498
BstMCI	CGRYCG	1 cut(s)	1516
BstNSI	RCATGY	8 cut(s)	1829, 2250, 2945, 3113, 3221, 3689, 4058, 4776
BstPAI	GACNNNNGTC	2 cut(s)	2187, 2567
BstSFI	CTRYAG	6 cut(s)	963, 1261, 1887, 2316, 2601, 3900
BstSLI	GKGCMC	1 cut(s)	1846
BstSNI	TACGTA	1 cut(s)	1301
BstUI	CGCG	1 cut(s)	1518
BstV2I	GAAGAC	2 cut(s)	2078, 4563
BstX2I	RGATCY	1 cut(s)	2372
BstXI	CCANNNNNNTGG	2 cut(s)	2179, 2840
BstYI	RGATCY	1 cut(s)	2372
BstZ17I	GTATAC	2 cut(s)	2795, 4236
Bsu36I	CCTNAGG	1 cut(s)	1473
BsuI	GTATCC	2 cut(s)	3381, 3965
BsuRI	GGCC	8 cut(s)	5, 2146, 2275, 3045, 3760, 3981, 4467, 4686
BtgI	CCRYGG	3 cut(s)	1088, 3803, 3888
BtsI	GCAGTG	2 cut(s)	3419, 3666
BveI	ACCTGC	1 cut(s)	1454
CaiI	CAGNNNCTG	3 cut(s)	2495, 2750, 3272
CciI	TCATGA	1 cut(s)	4522
CfoI	GCGC	4 cut(s)	36, 682, 1314, 3844
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	9 cut(s)	4, 1368, 1469, 2201, 3003, 3197, 3352, 3758, 4684
CseI	GACGC	7 cut(s)	1507, 1653, 1667, 2151, 3372, 3665, 3997
CsiI	ACCWGGT	1 cut(s)	913
Csp6I	GTAC	9 cut(s)	527, 876, 1107, 1451, 1855, 1876, 2176, 2696, 2856
CspAI	ACCGGT	1 cut(s)	367
CspCI	CAANNNNNGTGG	2 cut(s)	3051, 3086
CviQI	GTAC	9 cut(s)	527, 876, 1107, 1451, 1855, 1876, 2176, 2696, 2856
DraI	TTTAAA	2 cut(s)	948, 3315
DraIII	CACNNNGTG	1 cut(s)	1137
DrdI	GACNNNNNNGTC	2 cut(s)	2485, 4007
DseDI	GACNNNNNNGTC	2 cut(s)	2485, 4007
EaeI	YGGCCR	2 cut(s)	3979, 4465
Eam1104I	CTCTTC	4 cut(s)	487, 2778, 3981, 4732
EarI	CTCTTC	4 cut(s)	487, 2778, 3981, 4732
Eco105I	TACGTA	1 cut(s)	1301
Eco130I	CCWWGG	4 cut(s)	648, 1088, 3062, 3803
Eco24I	GRGCYC	5 cut(s)	891, 2021, 3545, 3720, 4522
Eco31I	GGTCTC	1 cut(s)	2195
Eco32I	GATATC	3 cut(s)	1549, 2030, 3446
Eco47I	GGWCC	6 cut(s)	1368, 1469, 2201, 3003, 3197, 3352
Eco57I	CTGAAG	7 cut(s)	141, 375, 396, 1599, 2103, 2517, 3904
Eco81I	CCTNAGG	1 cut(s)	1473
Eco88I	CYCGRG	1 cut(s)	343
EcoNI	CCTNNNNNAGG	1 cut(s)	840
EcoRI	GAATTC	3 cut(s)	454, 1123, 1478
EcoRV	GATATC	3 cut(s)	1549, 2030, 3446
EcoT14I	CCWWGG	4 cut(s)	648, 1088, 3062, 3803
EcoT22I	ATGCAT	5 cut(s)	1810, 2252, 3283, 3687, 4248
EcoT38I	GRGCYC	5 cut(s)	891, 2021, 3545, 3720, 4522
ErhI	CCWWGG	4 cut(s)	648, 1088, 3062, 3803
Esp3I	CGTCTC	1 cut(s)	1525
FaqI	GGGAC	7 cut(s)	906, 992, 2111, 3370, 4167, 4619, 4882
FauI	CCCGC	2 cut(s)	1134, 4509
FauNDI	CATATG	2 cut(s)	773, 4388
FbaI	TGATCA	2 cut(s)	319, 351
FblI	GTMKAC	2 cut(s)	2794, 4235
FriOI	GRGCYC	5 cut(s)	891, 2021, 3545, 3720, 4522
FspAI	RTGCGCAY	1 cut(s)	3843
FspBI	CTAG	9 cut(s)	710, 734, 1733, 2237, 3618, 3735, 3747, 4020, 4149
FspI	TGCGCA	1 cut(s)	3843
GlaI	GCGC	4 cut(s)	35, 681, 1313, 3843
GsaI	CCCAGC	2 cut(s)	1050, 3754
GsuI	CTGGAG	3 cut(s)	14, 3870, 4376
HaeII	RGCGCY	1 cut(s)	37
HaeIII	GGCC	8 cut(s)	5, 2146, 2275, 3045, 3760, 3981, 4467, 4686
HapII	CCGG	7 cut(s)	37, 57, 368, 429, 1700, 3116, 4553
HgaI	GACGC	7 cut(s)	1507, 1653, 1667, 2151, 3372, 3665, 3997
HhaI	GCGC	4 cut(s)	36, 682, 1314, 3844
Hin1I	GRCGYC	1 cut(s)	1645
Hin6I	GCGC	4 cut(s)	34, 680, 1312, 3842
HinP1I	GCGC	4 cut(s)	34, 680, 1312, 3842
HincII	GTYRAC	2 cut(s)	505, 4162
HindII	GTYRAC	2 cut(s)	505, 4162
HindIII	AAGCTT	4 cut(s)	483, 950, 2905, 3404
HpaII	CCGG	7 cut(s)	37, 57, 368, 429, 1700, 3116, 4553
Hpy166II	GTNNAC	8 cut(s)	505, 876, 1421, 2795, 2995, 3997, 4162, 4236
Hpy8I	GTNNAC	8 cut(s)	505, 876, 1421, 2795, 2995, 3997, 4162, 4236
Hpy99I	CGWCG	2 cut(s)	122, 1683
HpyCH4III	ACNGT	9 cut(s)	1081, 1188, 2320, 2695, 2931, 3560, 3892, 3931, 4169
HpyCH4IV	ACGT	2 cut(s)	1300, 2971
HpySE526I	ACGT	2 cut(s)	1300, 2971
Hsp92I	GRCGYC	1 cut(s)	1645
HspAI	GCGC	4 cut(s)	34, 680, 1312, 3842
KpnI	GGTACC	2 cut(s)	530, 1858
Ksp22I	TGATCA	2 cut(s)	319, 351
LguI	GCTCTTC	1 cut(s)	2778
MabI	ACCWGGT	1 cut(s)	913
MaeI	CTAG	9 cut(s)	710, 734, 1733, 2237, 3618, 3735, 3747, 4020, 4149
MaeII	ACGT	2 cut(s)	1300, 2971
MaeIII	GTNAC	7 cut(s)	370, 720, 1559, 2476, 4040, 4768, 4880
MfeI	CAATTG	1 cut(s)	4701
MflI	RGATCY	1 cut(s)	2372
MhlI	GDGCHC	7 cut(s)	891, 1846, 2021, 2455, 3545, 3720, 4522
MlsI	TGGCCA	1 cut(s)	4467
MluNI	TGGCCA	1 cut(s)	4467
MmeI	TCCRAC	4 cut(s)	1170, 3568, 3698, 4297
Mox20I	TGGCCA	1 cut(s)	4467
Mph1103I	ATGCAT	5 cut(s)	1810, 2252, 3283, 3687, 4248
MroXI	GAANNNNTTC	4 cut(s)	657, 3502, 4291, 4459
MscI	TGGCCA	1 cut(s)	4467
MslI	CAYNNNNRTG	1 cut(s)	4656
Msp20I	TGGCCA	1 cut(s)	4467
MspA1I	CMGCKG	6 cut(s)	1583, 2187, 2441, 2747, 3000, 4451
MspCI	CTTAAG	1 cut(s)	3856
MspI	CCGG	7 cut(s)	37, 57, 368, 429, 1700, 3116, 4553
MunI	CAATTG	1 cut(s)	4701
Mva1269I	GAATGC	4 cut(s)	1383, 2250, 2728, 3053
MvnI	CGCG	1 cut(s)	1518
NciI	CCSGG	3 cut(s)	38, 430, 1701
NcoI	CCATGG	2 cut(s)	1088, 3803
NdeI	CATATG	2 cut(s)	773, 4388
NheI	GCTAGC	1 cut(s)	3746
NmeAIII	GCCGAG	1 cut(s)	1656
NmuCI	GTSAC	2 cut(s)	2476, 4040
NsbI	TGCGCA	1 cut(s)	3843
NsiI	ATGCAT	5 cut(s)	1810, 2252, 3283, 3687, 4248
NspI	RCATGY	8 cut(s)	1829, 2250, 2945, 3113, 3221, 3689, 4058, 4776
NspV	TTCGAA	2 cut(s)	2069, 2881
PaeI	GCATGC	2 cut(s)	2250, 3689
PaeR7I	CTCGAG	1 cut(s)	343
PagI	TCATGA	1 cut(s)	4522
PaqCI	CACCTGC	1 cut(s)	1454
PciI	ACATGT	4 cut(s)	2941, 3217, 4054, 4772
PciSI	GCTCTTC	1 cut(s)	2778
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 4005
PctI	GAATGC	4 cut(s)	1383, 2250, 2728, 3053
PdmI	GAANNNNTTC	4 cut(s)	657, 3502, 4291, 4459
PfeI	GAWTC	9 cut(s)	89, 395, 544, 1865, 2297, 2662, 3023, 3884, 4112
PflFI	GACNNNGTC	1 cut(s)	1647
PfoI	TCCNGGA	1 cut(s)	3847
PinAI	ACCGGT	1 cut(s)	367
Ple19I	CGATCG	1 cut(s)	1516
Ppu21I	YACGTR	2 cut(s)	1301, 2972
PscI	ACATGT	4 cut(s)	2941, 3217, 4054, 4772
PshAI	GACNNNNGTC	2 cut(s)	2187, 2567
PshBI	ATTAAT	3 cut(s)	1743, 3957, 4082
PsiI	TTATAA	1 cut(s)	3708
PspFI	CCCAGC	2 cut(s)	1046, 3750
PspPI	GGNCC	9 cut(s)	4, 1368, 1469, 2201, 3003, 3197, 3352, 3758, 4684
PspXI	VCTCGAGB	1 cut(s)	343
PstI	CTGCAG	2 cut(s)	1265, 3904
PstNI	CAGNNNCTG	3 cut(s)	2495, 2750, 3272
PsuI	RGATCY	1 cut(s)	2372
PsyI	GACNNNGTC	1 cut(s)	1647
PvuI	CGATCG	1 cut(s)	1516
PvuII	CAGCTG	5 cut(s)	1583, 2441, 2747, 3000, 4451
RgaI	GCGATCGC	1 cut(s)	1516
RsaI	GTAC	9 cut(s)	528, 877, 1108, 1452, 1856, 1877, 2177, 2697, 2857
RsaNI	GTAC	9 cut(s)	527, 876, 1107, 1451, 1855, 1876, 2176, 2696, 2856
RseI	CAYNNNNRTG	1 cut(s)	4656
SapI	GCTCTTC	1 cut(s)	2778
Sau96I	GGNCC	9 cut(s)	4, 1368, 1469, 2201, 3003, 3197, 3352, 3758, 4684
ScaI	AGTACT	1 cut(s)	2857
SduI	GDGCHC	7 cut(s)	891, 1846, 2021, 2455, 3545, 3720, 4522
SexAI	ACCWGGT	1 cut(s)	913
SfaAI	GCGATCGC	1 cut(s)	1516
SfcI	CTRYAG	6 cut(s)	963, 1261, 1887, 2316, 2601, 3900
Sfr274I	CTCGAG	1 cut(s)	343
SfuI	TTCGAA	2 cut(s)	2069, 2881
SgfI	GCGATCGC	1 cut(s)	1516
SinI	GGWCC	6 cut(s)	1368, 1469, 2201, 3003, 3197, 3352
SlaI	CTCGAG	1 cut(s)	343
SmiMI	CAYNNNNRTG	1 cut(s)	4656
SnaBI	TACGTA	1 cut(s)	1301
SpeI	ACTAGT	1 cut(s)	2236
SphI	GCATGC	2 cut(s)	2250, 3689
SsiI	CCGC	7 cut(s)	93, 302, 1141, 2187, 3006, 3602, 4516
SspI	AATATT	2 cut(s)	2712, 4206
SspMI	CTAG	9 cut(s)	710, 734, 1733, 2237, 3618, 3735, 3747, 4020, 4149
StyI	CCWWGG	4 cut(s)	648, 1088, 3062, 3803
TaaI	ACNGT	9 cut(s)	1081, 1188, 2320, 2695, 2931, 3560, 3892, 3931, 4169
TaiI	ACGT	2 cut(s)	1303, 2974
TaqI	TCGA	9 cut(s)	21, 256, 326, 344, 1681, 2069, 2665, 2881, 3496
TatI	WGTACW	4 cut(s)	875, 1875, 2175, 2855
TauI	GCSGC	1 cut(s)	304
TfiI	GAWTC	9 cut(s)	89, 395, 544, 1865, 2297, 2662, 3023, 3884, 4112
TseFI	GTSAC	2 cut(s)	2476, 4040
Tsp45I	GTSAC	2 cut(s)	2476, 4040
TspGWI	ACGGA	7 cut(s)	537, 1708, 2749, 3823, 3827, 4059, 4815
Tth111I	GACNNNGTC	1 cut(s)	1647
Vha464I	CTTAAG	1 cut(s)	3856
VpaK11BI	GGWCC	6 cut(s)	1368, 1469, 2201, 3003, 3197, 3352
VspI	ATTAAT	3 cut(s)	1743, 3957, 4082
XagI	CCTNNNNNAGG	1 cut(s)	840
XapI	RAATTY	6 cut(s)	215, 454, 1123, 1478, 2528, 2589
XceI	RCATGY	8 cut(s)	1829, 2250, 2945, 3113, 3221, 3689, 4058, 4776
XcmI	CCANNNNNNNNNTGG	4 cut(s)	592, 1865, 2290, 3172
XhoI	CTCGAG	1 cut(s)	343
XmiI	GTMKAC	2 cut(s)	2794, 4235
XmnI	GAANNNNTTC	4 cut(s)	657, 3502, 4291, 4459
XspI	CTAG	9 cut(s)	710, 734, 1733, 2237, 3618, 3735, 3747, 4020, 4149
ZrmI	AGTACT	1 cut(s)	2857
Zsp2I	ATGCAT	5 cut(s)	1810, 2252, 3283, 3687, 4248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.