pycom13g12460
NAC Family

Inactive serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
8692295 .. 8698957
6663 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g12460.2

Sequence Viewer

Length: 5055 bp
ATGGAGAGAAACTTTCCAAGCAAATCCTTGAAATCGAACGATCGAATGGCGCAGCAAATGTGCTTCGACTGCCTCCAACGCCGGATTCACTCCGACTTCTCCGGCAAACTCGTTTTCTCTTACGGCCTCTCCGATTCCGCCTTCCCTTTTGGCTCCTCAGCCGTCGTTCAGTTGTGTAATTCAAGTGGGGAAGCTGCTTCGGCTCCTCAGTTTTTGCTCAAATTTCTACCCAGTCATCCAAATGATTGCTTGACTAAATATGTTAATGAATATGTCCTGGACAATGCTGAAGGCTGCAGTGATAATGGGATTGATGATAGGATTGCTTCAGTTGGAGTAACTCAGGATGAAGAAGAAATTAGTTCTGATGTTTACAGGAAAGAAAAACCAAAGTCAGATTCTTTAATGAATGAGCCTAAGTGTTTGTCAAATGGTGGCACAGAAATATTGCTACATAGTTCTACCTGTAATCATTCCACTAGGTTTTCTTGCTCGAGGGTTATCAGCGCATTGGCATCGGTTAGTTATGTTGGCAATTTCTCAGACTCAGTTTTTGAAGATCTTGCTGTTAACTCTTTGACCGGGTCTTTGGAAGATCACATATTGAATTCGCTTAGTCTCTTGATTGAAGGGAAAGCTTCAGGGAGAGACAGTGTAAATTTTCTTAACTTACTTGGGATACCGTCGTTTGATGAAAATCAGTTCCCTGGCTCCCTGAGGCATCCAAATATTGCTCCTGTACTTATGATGGTTAAAGCATCCCATTATATAGATGTAGCTCTTCCCAAAACTCCGTACACATTGGAAAACATTCTCCATTACAGTCCCGAAGCCTTAAAATCTGATTGGCATATAAGGTTTCTGATATACCAGTTGCTCTCAGCTCTAGCTTATATTCATGGTTTAGGGGTCGCCCATGGCAATATATGTCCATCCAGTGTAATGCTTACTGAATCATGCTGGTCTCGGCTGTCCATTTTTGATAAGCCCGGGGTAGGATTTAGTTCAAGTTCAAGAGGTAAGGAATGCACAAGTACCTTACCGGAAAAGGTAGGTTGCTCAGAAGCTGGTTGTCCCTCTCAAGGTCTTTATGCTGATTTGAAGCTTTCCCCATCTATAGACTGGCATCGTGACTTCAATCAATGGTGGAGAGGAGAGATCAGTAATTTTGAGTATCTACTCATCTTGAATAGATTAGCTGGGCGAAGGTGGGGTGACCACACATTTCATACAGTGATGCCTTGGGTAATAGATTTTAGCATGAAACCTGATGAGAATTCAGATGCAGGGTGGCGGGATTTAAACAAGAGTAAATGGAGGTTGGCTAAAGGTGATGAACAGTTGGACTTCACCTATTCAACATCGGAGTTCCCACATCACGTATCTGATGAATGTCTTTCTGAATTGGCTGTGTGCAGTTATAAGGCTAGGAGGTTACCTTTGAGTGTTCTACGTATGGCTGTTCGCTCAGTCTATGAACCTAATGAATATCCTTCTACCATGCAAAGACTTTATCAGTGGACCCCTGATGAGTGTATTCCGGAGTTTTACTGCAATCCTCAAATTTTTCATTCACTTCATGCTGGTATGACTGACTTGGCGGTACCTTTATGGGCAGATGGTCCTGAGGAATTCATTAAATTGCATCGTGATGCTTTAGAAAGCGAACGGGTCTCACGTGAACTCCATCACTGGATTGATATCACCTTTGGCTACAAGATGTCAGGCGAGGCAGCTGTTTATGCAAAGAATGTAATGCTTCCTTCATCAGAACCTATGATGCCGAGGTCTGCAGGACGCCGTCAGCTGTTCACTCAACCTCACCCTATGCGTCGAGGTGCAGTGCGGAAACCATGTGATAGCACCAATGAGTCAGCTTTGCATCAAGGGAAAATGAATGAATTAAGGAGTGACAGTTCTGTCCTATCTGAAACTGCTTACTTGCAAGAATTAGAAGATGCATCTTCCTTTTGTGAACATGCTATGCATTTAAGTCCCCTCTATGGCTACCATCTAGACTTTGTGAGGGACATTTCTCCTGTACAAGAGTCATCAGGCGAGAATGTTAACAAAAGTATACCTCGGTCATCTGACACTAAGAAAAACCAGTTGTCACGGTTACATATTGATACAAGTTATCTACTTGAGCATATTGAAGTGGAGGATGAAGGTTCCCGGGGATATCAAGAGCTATTACTTTGGAGGGAAAAATCATCTTGTTTAAAGACGTTCTCTGAAGAAATTGCAAGGGATATATTTTCTGTCGGTTGTCTCTTAGCAGAACTTCATTTGAGGAAGCCACTTTTTGACCCAAGCTCATTGACCATGTACTTGGACAGTGGTGTATTACCTGGATTGATGCATGAACTTCCTCCTCACACCAAATTACTTGTTGAAGCTTGCATTCAAAAGGATTGCATGAGGAGACCATCGGCTAAGTGTCTGTTGGAATCACCATATTTTCCTACTACGGTTAAGGCGTCCTACTTATTTCTGGCCCCTCTCCAGCTTCTGGCTAAAGGTGGATCCTGCCTTCAGTATGCTGCAAATTTTGCAAAGCAAGGAGTCCTCAAGGCAATGGGAACATTTGCTGCGGAAATGTGTGCTCCTTATTGCTTATCGTTTGTGGTGACTCCCTTATCAGATACTGAAGCCGAATGGGCGTATATGCTACTGAAAGAATTTATCAAAAGTTTGACCCCTAAAGCAGTGAAGACATTAGTCTTGCCTGCCATCCAGAAGATTTTACAGACTACAGGTTATTCACATCTAAAGGTTTCTATTCTACAAGACTCCTTTGTTCGAGAGATATGGAATCGAACTGGCAAACAAGTATATCTTGAAACTGTACATCCTCTTGTTATATTGAACTTATATACTGCCGCTCATAATAGTTCAGCAACTGCTGCTTCCGTACTGCTTATTTGCTCAAGTGAAGAACTCGGTATACCTATTACCATTCATCAGACAATCTTACCCCTGATTCAATGCTTTGGGAAAGGTCTCAGTAGTGATGGAATTGACGTGCTGGTTCGAATTGGTGGTTTACTGGGAGAGAACTTCATTGTCAGACAGATGATGCCGTTGCTAAAACATGTGTTTCATTCCTGTATTGGCGTTTCACGTATGAATAAGCCTGAGCCTGTCCACAGCTGGAGTGCTTTTGCTCTTATTGATTGTTTGACGACAATAGATGGCCTTGTTGCATTTTTGCCAAGGGAGGTGGTTGCGAAGGTGCTAGTTGAAGATAAAAGTTGCCCACAGGTTCTGGTTCTTATGGAGACAAGTTTTGAATATAGAGTGCTTCAGGTTGCTGCTACTACCCTAATGGCAGTTTGTGAACGGATAGGACCAGATTTGACAGCATTGCATGTTTTGCCACAACTTAAAGAGCTATTTGATGAGCTTGCTTTCTCACCGAGAAAAGCTAATGCTTCTACTTCCTTTGGCAGAAGGCTGAAGGGTTCAAAGCCAATAATTGACGGAGGGGGTCTGATTGAAAGTCGTATGGACCTTGCGTTGCTTCTGTATCCGTCTTTTGCATACCTTCTTGGGATAGAGAAGCTTCGTCAGTGTTGTACAACATGGTTATTACTTGAGCAATATCTTCTACAATATCATAACTGGAAGTGGGAACACACAGGAGAATTGTCTCGAAGTGGTTCAGACACTATACTCAGTAAAAGATCTGCATTCAGCAATCGCTCAACTCCTGAATACAGTCCTGCTAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCACAAGGAACTAGAGGTGCCAAAAACATGATGCCTCAAAAACGGTTCTCTGAAATGCATCAGAGTTCAGCCGAAATGCATGCATCAAATTTTAAATTCGAGCCCTGGTTTTGGTTCCCTAGTCCAGCTTCTAGCTGGGATGGGCCTGATTTTCTGGCCCGTGCTGGGGGTGTGAAGGATGAACATCCATGGAAGATCAGAGCATCTGTTATATACTCAGTTCGTGCGCACCCTGGGGCCTTAAGGTATTTAGCTGTCTGCCCAGATGAATGTACGGTTTTTACTGCAGGAATTGGTGCAGGGTTCAAAGGGACTGTTCAAAAATGGGAGCTGGCTAGAATCAATTGTGTATCAGGATACTATGGCCACGAGGAGGTTGTGAACGATATTTGTATCTTATCGTCAAGTGGAAGAGTTGCATCCTGTGATGGAACGATACATGTTTGGAATAGCCGAACTGGAAAATTAATTTCAGTATACTCTGAACCATCTATGGATTCTGCACATGTTTCAAGCCCTCCATCTTCTTCCTCCAGGGCCAGTCTTGACCAGGTTAATATGCTCAGTTCCAATGCACAGTCGAGTGGAATATTGACTGGGGCATTTGATGGGAGCTTGTATACTTGTATGCATCAGACAGAACTTGGTGAAAAGCTTGTAGTTGGCACTGGAAATGGTTCACTCAGGTTCATTGATGTTGTCCGAGGACAAAAGCTTCACCTTTGGAGGGGGGATTCTACGGAGTCTGGATATCCTTCTCTTATTTCTTCCATATGCTCCTGTGGGTCTGATAAAATGCAACCGGATGGAGCTTCTTCACCCTCTTGGATTGCAGCTGGATTGAGTTCTGGTCATTGTAGATTATTTGATGCAAGGAGCGGAAATGTTATATCCTCTTGGAAGGCTCATGATGGATACGTGACAAAGTTGGCTGCACCAGAGGACCATTTACTTGTGTCCAGCTCTCTTGACAAGTCTTTAAGAATTTGGGACTTGAGAAGGAATTGGCCATCTCAGCCCACAATTCTTCAGGGTCACACAGACGGTGTATCTTCATTCTCCGTGTGGGGCCAAGACGTTATTTCAATTTCCAGAAATAAGATTGGAATTTCTTCTCTGTCTAAATCCTCCGATGATGATGGACAGCAGGCTGTTACATGTCAAAAACTGTACATGGCGGATCACGGAGCAAGAAACTTTTCGGTGTTGTCAAGCATAAGTATATTACCCTTCTCAAGGTTGTTCCTGGTTGGAACTGAAGATGGCTACCTAAGAATATGTTGCTGA

Protein Analysis

1685

Amino Acids

186.94

Weight (kDa)

6.25

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015983)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18525
fragaria_vesca FvH4_4g21250 FvH4_4g21250
malus_domestica MD13G1143700.v1.1
prunus_persica Prupe.1G108200_v2.0.a1
pyrus_communis pycom13g12460
rosa_chinensis RchiOBHm_Chr4g0426871
rosa_laevigata RLG00000007272
rosa_multiflora Rmu_sc0000953.1_g000015
rosa_roxburghii Rroxscaffold_5G00368840
rosa_samantha Rh4AG270500 Rh4BG276800 Rh4CG291500 Rh4DG274000
rosa_wichuraiana Rw4G023470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1422
AasI GACNNNNNNGTC 1 cut(s) 1919
Acc16I TGCGCA 1 cut(s) 3996
Acc65I GGTACC 1 cut(s) 1603
AccB1I GGYRCC 2 cut(s) 1603, 3785
AccB7I CCANNNNNTGG 1 cut(s) 2512
AccBSI CCGCTC 2 cut(s) 2885, 4647
AccI GTMKAC 4 cut(s) 2077, 2947, 4245, 4388
AccIII TCCGGA 1 cut(s) 1540
AciI CCGC 8 cut(s) 138, 1294, 1601, 1846, 2594, 2883, 4647, 4946
AclWI GGATC 3 cut(s) 2520, 2533, 4956
AcoI YGGCCR 2 cut(s) 4132, 4775
AcvI CACGTG 1 cut(s) 1679
AcyI GRCGYC 2 cut(s) 1798, 2480
AflII CTTAAG 1 cut(s) 4009
AflIII ACRYGT 4 cut(s) 3094, 4207, 4273, 4925
AjiI CACGTC 1 cut(s) 3025
AjnI CCWGG 8 cut(s) 276, 706, 2350, 3872, 4000, 4301, 4317, 5013
AjuI GAANNNNNNNTTGG 4 cut(s) 69, 101, 382, 414
AloI GAACNNNNNNTCC 2 cut(s) 1900, 1932
Alw21I GWGCWC 1 cut(s) 2608
Alw26I GTCTC 9 cut(s) 623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
AlwI GGATC 3 cut(s) 2520, 2533, 4956
AlwNI CAGNNNCTG 5 cut(s) 1067, 2512, 2648, 2903, 3268
Ama87I CYCGRG 3 cut(s) 493, 989, 2175
Aor13HI TCCGGA 1 cut(s) 1540
ArsI GACNNNNNNTTYG 4 cut(s) 536, 568, 571, 603
AseI ATTAAT 1 cut(s) 4235
Asp700I GAANNNNTTC 5 cut(s) 810, 3661, 4444, 4879, 4966
Asp718I GGTACC 1 cut(s) 1603
AspLEI GCGC 3 cut(s) 52, 509, 3997
AsuC2I CCSGG 5 cut(s) 583, 990, 991, 2176, 2177
AsuII TTCGAA 1 cut(s) 3034
AvaI CYCGRG 3 cut(s) 493, 989, 2175
AvaII GGWCC 5 cut(s) 1521, 1622, 3350, 3511, 4711
AxyI CCTNAGG 2 cut(s) 716, 1626
BaeI ACNNNNGTAYC 2 cut(s) 671, 704
BalI TGGCCA 2 cut(s) 4134, 4777
BamHI GGATCC 1 cut(s) 2525
BanI GGYRCC 2 cut(s) 1603, 3785
BanII GRGCYC 1 cut(s) 3873
BauI CACGAG 1 cut(s) 4136
BbrPI CACGTG 1 cut(s) 1679
BbsI GAAGAC 1 cut(s) 2720
Bbv12I GWGCWC 1 cut(s) 2608
BbvCI CCTCAGC 1 cut(s) 157
BceAI ACGGC 4 cut(s) 139, 146, 1785, 3067
BcgI CGANNNNNNTGC 4 cut(s) 498, 532, 3830, 3864
BciT130I CCWGG 8 cut(s) 278, 708, 2352, 3874, 4002, 4303, 4319, 5015
BciVI GTATCC 4 cut(s) 672, 3540, 4118, 4676
BcnI CCSGG 5 cut(s) 583, 990, 991, 2176, 2177
BcoDI GTCTC 9 cut(s) 623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
BfaI CTAG 9 cut(s) 480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
BfmI CTRYAG 5 cut(s) 295, 1116, 1791, 2754, 4053
BfrI CTTAAG 1 cut(s) 4009
BfuI GTATCC 4 cut(s) 672, 3540, 4118, 4676
BglI GCCNNNNNGGC 1 cut(s) 2660
BglII AGATCT 2 cut(s) 559, 3686
BlpI GCTNAGC 1 cut(s) 3729
Bme18I GGWCC 5 cut(s) 1521, 1622, 3350, 3511, 4711
BmeT110I CYCGRG 3 cut(s) 493, 989, 2175
BmgBI CACGTC 1 cut(s) 3025
BmrI ACTGGG 3 cut(s) 225, 3059, 4374
BmuI ACTGGG 3 cut(s) 225, 3059, 4374
BoxI GACNNNNGTC 1 cut(s) 2720
BpiI GAAGAC 1 cut(s) 2720
BpmI CTGGAG 3 cut(s) 2489, 3175, 4285
Bpu10I CCTNAGC 2 cut(s) 157, 3138
Bpu1102I GCTNAGC 1 cut(s) 3729
Bpu14I TTCGAA 1 cut(s) 3034
BpuEI CTTGAG 7 cut(s) 1065, 2165, 2555, 2914, 3617, 4783, 4987
BpuMI CCSGG 5 cut(s) 583, 990, 991, 2176, 2177
BsaAI YACGTR 5 cut(s) 1381, 1454, 1679, 3125, 4687
BsaBI GATNNNNATC 3 cut(s) 696, 1700, 3951
BsaHI GRCGYC 2 cut(s) 1798, 2480
BsaI GGTCTC 4 cut(s) 969, 1678, 2419, 3008
BsaWI WCCGGW 3 cut(s) 1042, 1540, 4570
BsaXI ACNNNNNCTCC 8 cut(s) 113, 143, 637, 667, 1668, 1698, 1900, 1930
Bse21I CCTNAGG 2 cut(s) 716, 1626
Bse3DI GCAATG 2 cut(s) 2583, 3365
Bse8I GATNNNNATC 3 cut(s) 696, 1700, 3951
BseAI TCCGGA 1 cut(s) 1540
BseBI CCWGG 8 cut(s) 278, 708, 2352, 3874, 4002, 4303, 4319, 5015
BseJI GATNNNNATC 3 cut(s) 696, 1700, 3951
BseMI GCAATG 2 cut(s) 2583, 3365
BseRI GAGGAG 6 cut(s) 145, 195, 1167, 2364, 2437, 4154
BseYI CCCAGC 3 cut(s) 1199, 3903, 3932
BsgI GTGCAG 5 cut(s) 1435, 1860, 4086, 4254, 4686
Bsh1285I CGRYCG 1 cut(s) 43
BshNI GGYRCC 2 cut(s) 1603, 3785
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 1 cut(s) 2608
BsiHKCI CYCGRG 3 cut(s) 493, 989, 2175
BsiSI CCGG 8 cut(s) 82, 102, 582, 990, 1043, 1541, 2176, 4571
BslFI GGGAC 6 cut(s) 810, 1059, 1980, 2042, 4093, 4772
BsmAI GTCTC 9 cut(s) 623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
BsmFI GGGAC 6 cut(s) 810, 1059, 1980, 2042, 4093, 4772
BsmI GAATGC 3 cut(s) 1031, 2403, 3692
Bso31I GGTCTC 4 cut(s) 969, 1678, 2419, 3008
BsoBI CYCGRG 3 cut(s) 493, 989, 2175
Bsp119I TTCGAA 1 cut(s) 3034
Bsp1286I GDGCHC 2 cut(s) 2608, 3873
Bsp13I TCCGGA 1 cut(s) 1540
Bsp1407I TGTACA 4 cut(s) 2041, 2848, 3578, 4938
Bsp143I GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
Bsp1720I GCTNAGC 1 cut(s) 3729
Bsp19I CCATGG 2 cut(s) 916, 3956
BspACI CCGC 8 cut(s) 138, 1294, 1601, 1846, 2594, 2883, 4647, 4946
BspEI TCCGGA 1 cut(s) 1540
BspHI TCATGA 1 cut(s) 4675
BspMAI CTGCAG 3 cut(s) 299, 1795, 4057
BspPI GGATC 3 cut(s) 2520, 2533, 4956
BspQI GCTCTTC 1 cut(s) 786
BspT104I TTCGAA 1 cut(s) 3034
BspT107I GGYRCC 2 cut(s) 1603, 3785
BspTI CTTAAG 1 cut(s) 4009
BspTNI GGTCTC 4 cut(s) 969, 1678, 2419, 3008
BsrBI CCGCTC 2 cut(s) 2885, 4647
BsrDI GCAATG 2 cut(s) 2583, 3365
BsrGI TGTACA 4 cut(s) 2041, 2848, 3578, 4938
BssMI GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
BssNAI GTATAC 4 cut(s) 2078, 2948, 4246, 4389
BssNI GRCGYC 2 cut(s) 1798, 2480
BssSI CACGAG 1 cut(s) 4136
BssT1I CCWWGG 4 cut(s) 916, 1241, 3215, 3956
Bst1107I GTATAC 4 cut(s) 2078, 2948, 4246, 4389
Bst2BI CACGAG 1 cut(s) 4136
Bst2UI CCWGG 8 cut(s) 278, 708, 2352, 3874, 4002, 4303, 4319, 5015
Bst6I CTCTTC 2 cut(s) 786, 4174
BstACI GRCGYC 2 cut(s) 1798, 2480
BstAFI CTTAAG 1 cut(s) 4009
BstAPI GCANNNNNTGC 3 cut(s) 2552, 2906, 3376
BstAUI TGTACA 4 cut(s) 2041, 2848, 3578, 4938
BstBAI YACGTR 5 cut(s) 1381, 1454, 1679, 3125, 4687
BstBI TTCGAA 1 cut(s) 3034
BstC8I GCNNGC 6 cut(s) 2401, 2730, 3408, 3849, 4101, 4917
BstDSI CCRYGG 2 cut(s) 916, 3956
BstEII GGTNACC 2 cut(s) 1214, 1434
BstENI CCTNNNNNAGG 1 cut(s) 5002
BstHHI GCGC 3 cut(s) 52, 509, 3997
BstKTI GATC 8 cut(s) 43, 562, 598, 1161, 2528, 3689, 3966, 4951
BstMAI GTCTC 9 cut(s) 623, 642, 969, 1678, 2276, 2419, 3008, 3275, 3657
BstMBI GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
BstMCI CGRYCG 1 cut(s) 43
BstMWI GCNNNNNNNGC 9 cut(s) 69, 78, 200, 1742, 2552, 2660, 2906, 3376, 4783
BstNI CCWGG 8 cut(s) 278, 708, 2352, 3874, 4002, 4303, 4319, 5015
BstNSI RCATGY 7 cut(s) 1982, 3098, 3374, 3851, 4211, 4277, 4929
BstPAI GACNNNNGTC 1 cut(s) 2720
BstPI GGTNACC 2 cut(s) 1214, 1434
BstSFI CTRYAG 5 cut(s) 295, 1116, 1791, 2754, 4053
BstSNI TACGTA 1 cut(s) 1454
BstV2I GAAGAC 1 cut(s) 2720
BstX2I RGATCY 3 cut(s) 559, 2525, 3686
BstXI CCANNNNNNTGG 1 cut(s) 2332
BstYI RGATCY 3 cut(s) 559, 2525, 3686
BstZ17I GTATAC 4 cut(s) 2078, 2948, 4246, 4389
Bsu36I CCTNAGG 2 cut(s) 716, 1626
BsuI GTATCC 4 cut(s) 672, 3540, 4118, 4676
BtgI CCRYGG 2 cut(s) 916, 3956
BtrI CACGTC 1 cut(s) 3025
BtsI GCAGTG 3 cut(s) 304, 1848, 2715
Cac8I GCNNGC 6 cut(s) 2401, 2730, 3408, 3849, 4101, 4917
CaiI CAGNNNCTG 5 cut(s) 1067, 2512, 2648, 2903, 3268
CciI TCATGA 1 cut(s) 4675
CfoI GCGC 3 cut(s) 52, 509, 3997
Cfr9I CCCGGG 2 cut(s) 989, 2175
CseI GACGC 3 cut(s) 1806, 1820, 2469
CsiI ACCWGGT 1 cut(s) 4317
CspCI CAANNNNNGTGG 2 cut(s) 3204, 3239
DpnI GATC 8 cut(s) 42, 561, 597, 1160, 2527, 3688, 3965, 4950
DpnII GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
DraI TTTAAA 3 cut(s) 1302, 2223, 3862
DrdI GACNNNNNNGTC 1 cut(s) 1919
DseDI GACNNNNNNGTC 1 cut(s) 1919
EaeI YGGCCR 2 cut(s) 4132, 4775
Eam1104I CTCTTC 2 cut(s) 786, 4174
EarI CTCTTC 2 cut(s) 786, 4174
EciI GGCGGA 2 cut(s) 127, 4961
Eco105I TACGTA 1 cut(s) 1454
Eco130I CCWWGG 4 cut(s) 916, 1241, 3215, 3956
Eco24I GRGCYC 1 cut(s) 3873
Eco31I GGTCTC 4 cut(s) 969, 1678, 2419, 3008
Eco32I GATATC 3 cut(s) 1702, 2183, 4520
Eco47I GGWCC 5 cut(s) 1521, 1622, 3350, 3511, 4711
Eco72I CACGTG 1 cut(s) 1679
Eco81I CCTNAGG 2 cut(s) 716, 1626
Eco88I CYCGRG 3 cut(s) 493, 989, 2175
Eco91I GGTNACC 2 cut(s) 1214, 1434
EcoNI CCTNNNNNAGG 1 cut(s) 5002
EcoO109I RGGNCCY 1 cut(s) 4005
EcoO65I GGTNACC 2 cut(s) 1214, 1434
EcoRI GAATTC 3 cut(s) 607, 1276, 1631
EcoRII CCWGG 8 cut(s) 276, 706, 2350, 3872, 4000, 4301, 4317, 5013
EcoRV GATATC 3 cut(s) 1702, 2183, 4520
EcoT14I CCWWGG 4 cut(s) 916, 1241, 3215, 3956
EcoT22I ATGCAT 7 cut(s) 1963, 1989, 2364, 3828, 3849, 3853, 4401
EcoT38I GRGCYC 1 cut(s) 3873
ErhI CCWWGG 4 cut(s) 916, 1241, 3215, 3956
FalI AAGNNNNNCTT 2 cut(s) 2823, 2855
FaqI GGGAC 6 cut(s) 810, 1059, 1980, 2042, 4093, 4772
FauI CCCGC 1 cut(s) 1287
FauNDI CATATG 1 cut(s) 4541
FblI GTMKAC 4 cut(s) 2077, 2947, 4245, 4388
FriOI GRGCYC 1 cut(s) 3873
FspAI RTGCGCAY 1 cut(s) 3996
FspBI CTAG 9 cut(s) 480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
FspI TGCGCA 1 cut(s) 3996
GlaI GCGC 3 cut(s) 51, 508, 3996
GsaI CCCAGC 3 cut(s) 1203, 3907, 3936
GsuI CTGGAG 3 cut(s) 2489, 3175, 4285
HapII CCGG 8 cut(s) 82, 102, 582, 990, 1043, 1541, 2176, 4571
HgaI GACGC 3 cut(s) 1806, 1820, 2469
HhaI GCGC 3 cut(s) 52, 509, 3997
Hin1I GRCGYC 2 cut(s) 1798, 2480
Hin6I GCGC 3 cut(s) 50, 507, 3995
HinP1I GCGC 3 cut(s) 50, 507, 3995
HincII GTYRAC 2 cut(s) 571, 2068
HindII GTYRAC 2 cut(s) 571, 2068
HindIII AAGCTT 6 cut(s) 636, 1103, 2397, 3563, 4421, 4481
HpaI GTTAAC 2 cut(s) 571, 2068
HpaII CCGG 8 cut(s) 82, 102, 582, 990, 1043, 1541, 2176, 4571
Hpy99I CGWCG 3 cut(s) 167, 688, 1836
HpyCH4IV ACGT 8 cut(s) 1380, 1453, 1678, 2228, 3024, 3124, 4686, 4845
HpyF10VI GCNNNNNNNGC 9 cut(s) 69, 78, 200, 1742, 2552, 2660, 2906, 3376, 4783
HpySE526I ACGT 8 cut(s) 1380, 1453, 1678, 2228, 3024, 3124, 4686, 4845
Hsp92I GRCGYC 2 cut(s) 1798, 2480
HspAI GCGC 3 cut(s) 50, 507, 3995
Kpn2I TCCGGA 1 cut(s) 1540
KpnI GGTACC 1 cut(s) 1607
KspAI GTTAAC 2 cut(s) 571, 2068
Kzo9I GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
LguI GCTCTTC 1 cut(s) 786
MabI ACCWGGT 1 cut(s) 4317
MaeI CTAG 9 cut(s) 480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
MaeII ACGT 8 cut(s) 1380, 1453, 1678, 2228, 3024, 3124, 4686, 4845
MalI GATC 8 cut(s) 42, 561, 597, 1160, 2527, 3688, 3965, 4950
MbiI CCGCTC 2 cut(s) 2885, 4647
MboI GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
MfeI CAATTG 1 cut(s) 4111
MflI RGATCY 3 cut(s) 559, 2525, 3686
MhlI GDGCHC 2 cut(s) 2608, 3873
MlsI TGGCCA 2 cut(s) 4134, 4777
MluNI TGGCCA 2 cut(s) 4134, 4777
MlyI GAGTC 7 cut(s) 539, 1880, 2057, 2574, 2626, 2786, 4520
MmeI TCCRAC 7 cut(s) 100, 117, 313, 1323, 2427, 3730, 4999
Mox20I TGGCCA 2 cut(s) 4134, 4777
Mph1103I ATGCAT 7 cut(s) 1963, 1989, 2364, 3828, 3849, 3853, 4401
MroI TCCGGA 1 cut(s) 1540
MroXI GAANNNNTTC 5 cut(s) 810, 3661, 4444, 4879, 4966
MscI TGGCCA 2 cut(s) 4134, 4777
MslI CAYNNNNRTG 2 cut(s) 240, 1650
Msp20I TGGCCA 2 cut(s) 4134, 4777
MspA1I CMGCKG 4 cut(s) 1736, 1807, 3153, 4604
MspCI CTTAAG 1 cut(s) 4009
MspI CCGG 8 cut(s) 82, 102, 582, 990, 1043, 1541, 2176, 4571
MunI CAATTG 1 cut(s) 4111
Mva1269I GAATGC 3 cut(s) 1031, 2403, 3692
MvaI CCWGG 8 cut(s) 278, 708, 2352, 3874, 4002, 4303, 4319, 5015
MwoI GCNNNNNNNGC 9 cut(s) 69, 78, 200, 1742, 2552, 2660, 2906, 3376, 4783
NciI CCSGG 5 cut(s) 583, 990, 991, 2176, 2177
NcoI CCATGG 2 cut(s) 916, 3956
NdeI CATATG 1 cut(s) 4541
NdeII GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
NmeAIII GCCGAG 2 cut(s) 946, 1809
NmuCI GTSAC 7 cut(s) 1130, 1214, 1910, 2112, 2629, 4687, 4802
NsbI TGCGCA 1 cut(s) 3996
NsiI ATGCAT 7 cut(s) 1963, 1989, 2364, 3828, 3849, 3853, 4401
NspI RCATGY 7 cut(s) 1982, 3098, 3374, 3851, 4211, 4277, 4929
NspV TTCGAA 1 cut(s) 3034
PaeI GCATGC 1 cut(s) 3851
PaeR7I CTCGAG 1 cut(s) 493
PagI TCATGA 1 cut(s) 4675
PasI CCCWGGG 1 cut(s) 4001
PciI ACATGT 4 cut(s) 3094, 4207, 4273, 4925
PciSI GCTCTTC 1 cut(s) 786
PcsI WCGNNNNNNNCGW 3 cut(s) 129, 1675, 2477
PctI GAATGC 3 cut(s) 1031, 2403, 3692
PdmI GAANNNNTTC 5 cut(s) 810, 3661, 4444, 4879, 4966
PflFI GACNNNGTC 2 cut(s) 583, 1800
PflMI CCANNNNNTGG 1 cut(s) 2512
PfoI TCCNGGA 1 cut(s) 276
Ple19I CGATCG 1 cut(s) 43
PleI GAGTC 7 cut(s) 539, 1879, 2056, 2573, 2626, 2786, 4519
PmaCI CACGTG 1 cut(s) 1679
PmlI CACGTG 1 cut(s) 1679
PpsI GAGTC 7 cut(s) 539, 1879, 2056, 2573, 2626, 2786, 4519
Ppu21I YACGTR 5 cut(s) 1381, 1454, 1679, 3125, 4687
PscI ACATGT 4 cut(s) 3094, 4207, 4273, 4925
PshAI GACNNNNGTC 1 cut(s) 2720
PshBI ATTAAT 1 cut(s) 4235
PsiI TTATAA 1 cut(s) 1422
Psp6I CCWGG 8 cut(s) 276, 706, 2350, 3872, 4000, 4301, 4317, 5013
PspCI CACGTG 1 cut(s) 1679
PspEI GGTNACC 2 cut(s) 1214, 1434
PspFI CCCAGC 3 cut(s) 1199, 3903, 3932
PspGI CCWGG 8 cut(s) 276, 706, 2350, 3872, 4000, 4301, 4317, 5013
PspXI VCTCGAGB 1 cut(s) 493
PsrI GAACNNNNNNTAC 2 cut(s) 2931, 2963
PstI CTGCAG 3 cut(s) 299, 1795, 4057
PstNI CAGNNNCTG 5 cut(s) 1067, 2512, 2648, 2903, 3268
PsuI RGATCY 3 cut(s) 559, 2525, 3686
PsyI GACNNNGTC 2 cut(s) 583, 1800
PvuI CGATCG 1 cut(s) 43
PvuII CAGCTG 4 cut(s) 1736, 1807, 3153, 4604
RseI CAYNNNNRTG 2 cut(s) 240, 1650
SapI GCTCTTC 1 cut(s) 786
Sau3AI GATC 8 cut(s) 40, 559, 595, 1158, 2525, 3686, 3963, 4948
SchI GAGTC 7 cut(s) 539, 1880, 2057, 2574, 2626, 2786, 4520
SduI GDGCHC 2 cut(s) 2608, 3873
SexAI ACCWGGT 1 cut(s) 4317
SfcI CTRYAG 5 cut(s) 295, 1116, 1791, 2754, 4053
Sfr274I CTCGAG 1 cut(s) 493
SfuI TTCGAA 1 cut(s) 3034
SinI GGWCC 5 cut(s) 1521, 1622, 3350, 3511, 4711
SlaI CTCGAG 1 cut(s) 493
SmaI CCCGGG 2 cut(s) 991, 2177
SmiMI CAYNNNNRTG 2 cut(s) 240, 1650
SmlI CTYRAG 9 cut(s) 493, 1080, 2144, 2570, 2929, 3596, 4009, 4762, 5002
SmoI CTYRAG 9 cut(s) 493, 1080, 2144, 2570, 2929, 3596, 4009, 4762, 5002
SnaBI TACGTA 1 cut(s) 1454
SphI GCATGC 1 cut(s) 3851
SsiI CCGC 8 cut(s) 138, 1294, 1601, 1846, 2594, 2883, 4647, 4946
SspI AATATT 3 cut(s) 447, 730, 4359
SspMI CTAG 9 cut(s) 480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
StyI CCWWGG 4 cut(s) 916, 1241, 3215, 3956
TaiI ACGT 8 cut(s) 1383, 1456, 1681, 2231, 3027, 3127, 4689, 4848
TaqII GACCGA 1 cut(s) 2073
TatI WGTACW 6 cut(s) 739, 2041, 2328, 2848, 3578, 4938
TauI GCSGC 1 cut(s) 2885
TseFI GTSAC 7 cut(s) 1130, 1214, 1910, 2112, 2629, 4687, 4802
Tsp45I GTSAC 7 cut(s) 1130, 1214, 1910, 2112, 2629, 4687, 4802
TspGWI ACGGA 8 cut(s) 783, 2902, 3358, 3498, 3522, 4523, 4819, 4968
TspMI CCCGGG 2 cut(s) 989, 2175
Tth111I GACNNNGTC 2 cut(s) 583, 1800
Van91I CCANNNNNTGG 1 cut(s) 2512
Vha464I CTTAAG 1 cut(s) 4009
VpaK11BI GGWCC 5 cut(s) 1521, 1622, 3350, 3511, 4711
VspI ATTAAT 1 cut(s) 4235
XagI CCTNNNNNAGG 1 cut(s) 5002
XbaI TCTAGA 1 cut(s) 2014
XceI RCATGY 7 cut(s) 1982, 3098, 3374, 3851, 4211, 4277, 4929
XcmI CCANNNNNNNNNTGG 2 cut(s) 1119, 3900
XhoI CTCGAG 1 cut(s) 493
XmaI CCCGGG 2 cut(s) 989, 2175
XmiI GTMKAC 4 cut(s) 2077, 2947, 4245, 4388
XmnI GAANNNNTTC 5 cut(s) 810, 3661, 4444, 4879, 4966
XspI CTAG 9 cut(s) 480, 887, 1428, 2015, 3239, 3780, 3888, 3900, 4104
Zsp2I ATGCAT 7 cut(s) 1963, 1989, 2364, 3828, 3849, 3853, 4401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.