Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0016144

Physical Location & Seq

Genomic Coordinates Forward (+)

25490204 .. 25493157

Gene Structure 2954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g22810.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGTCTTCTTCTTCTTTAACCACAGTCCAGTCTTCTCTGCTGCTTTCTTGCTCCACAAGTCATCACAATGACAAACCTCCCCATATAAAATCTGTAAACTTTTCCCAAATCCCATCATGGGTCTCGTTAAAATCCACCTCAGCTCCATTGTTGAGCACCCAGCACATACAAACCGGGCAAGTCGAAAACGTTCACCTGGTTTCGTTATCGAAACAGGGGAAGATGAAAGAAGCGCGCGAGTTTCTGAAGCAAATGAACGAGGCCGGCGTGGCCGTGACTGCTCAGTCGTACCGGTGTTTGTTCGAGAAGTGTGGACTGATGGGTTATTTTTCTGACGGCAAATTCATTCACGAATGGTTGCGGAGTACAGTGAAGAGTCCAGCCGAGTTTCTTGAGAACGATGCGCTTAAGATGTACTGCGATTGCGGGAGTTTGAGGGATGCACAGAAGGTGTTTGATGAAATGCGTGGCAGGGATTTGGTTTCTTGGGTTATAATGATCTCTGCTTATGTGGAGAGCGGTGTTTTGAGCAAGGCTGTTGGGCTGTTTTTGGATATGCTGGAGTGTGGGGTGAGGCCGAATGCGTCGATTTTTACGGGGTTGTTGAAGAAGTTGGATGAGGATTTGCATCTGGAATTTGGGAAGCAGATGCATTCTTATGTTATAAGAAGTGGGAATGGTGGTGGTTCCGTTGAGACGGCGATTGGGAACATGTATGTGAAATGTGGGTGGTTGGATGGTGCTAGACTTGTGTTTGATCAGATGGGGGAGAACAAGAGTGTGGTGGCTTGGACTGGGTTGATGGTGGGGTATACTGAAGATGGGAAGCTGGGGGAGGTTTTGGAGTCGTTTGCTGAGATGGTTAGGGAGAGTGTAGAGGTTGATGATTTTGTTTTTTCGATTGTTCTCAAGGCATGTGCTGGTTTGGAGGAGTTGAATGCAGGAAGGCAAATCCATGGTTACAGTGTTAAGCTTGGATTAGATTCTGAGGTTTCTGTTGGAACTCCTCTAGTGGACTTCTATGTGAAATGTGGTGAATTTGAATCTGCTCGCCGAGCATTTAAGAGGATAGATGAACCGAATGATGTTTCATGGAGTGCCATAATCTCTGGCTATTGCCAGAATGGCCAATTTGAGGAGTGTCTTGAGATTTTTCAAACTTTAATTGGTAAAGGTGTTACATTGAATCCGTACATATATACAAGTATATTTCAAGCATGCTCTGCAGTTGCAGATATAAATTTTGGTGCTCAAGTTCATGCGGATGCAATAAAAAGAGGCTTTGTTGCATTCTTGTATGGAGCAAGTGCAATGATTACTATGTACTCAAAATGTGGCAGATTGGACTATGCCTATCAAGCATTTGAATCGATAGACAAACCTGATACTGTGGCCTGGACTGCTATAATTTGTGGTTATGCGTATCATGGCAATGCCTCTGAAGCTCTGCGTCTTTTCAGTAGAATGCAGAACTCTGGCATAAAGCCAAATTCAGTTACATTTATAGCTGTTCTAACTGCTTGTAGCCATTCAGGTTTGGTGACAGAGGCAAAGCAGTATTTGGATTCGATGTATAGTGTATATAATGTGGAACCAACCGTGGATCATTATGATTGTATGATCGATGTGTACTCTCGTGCTGGACGACTACAGGAGGCATTTGAACTGATAAAGAGTATGCCATTTGAGCCTGATGCAATGAGCTGGAAAAGCTTATTAGGTGGATGCTGGATACATCGAAATCTTGAGCTCGGAAAGTTTGCAGCTGAAAATCTCCTCCAGATGGACCCAGAGGACACCGCTAGTTACATTATCATGTTCAATTTGTATGCATCATTGGGAAAATGGGAAGAAGCTGCACGTTTTCGAAGAATGATGGTTGAAAAAAACTTGAGGAAAGAAACAGGTTGCAGCTGGATCACTGTCAAGGGCGAAACACACCGGTTTATAGTGGGCGATAAGCACCATTCTCAAATAGACCAGATATACTCAAAGCTAAATGAGCTAAGCATTTCTTTCAAGGATGATGAAGATTCACTTCTAACCGAGGAGGATGTACTGGCTGGTTTTCCTGAAAGGAAAGAACAGCTTCTTGACCACAGTGAGAGACTAGCTATAGCATTCGGGCTCATTTCCACACCAAGTAATGCCCCTATTGTGGTCTTTAAGAACATCAGGGCCTGCAAAGACTGTCATGAGTTTGCAAAACATGTCTCCATGGTAACAAGGCGTGTAATCATTGTGAGAGACTCCAACAGATTCCATCACTTTAAGTCGGGCGAGTGTTCTTGCAGAGATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

769

Amino Acids

85.97

Weight (kDa)

5.76

Isoelectric Point (pI)

36.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	159 - 204	3.7e-06	PPR repeat family
PPR_2	PF13041	260 - 307	1.9e-07	PPR repeat family
PPR_2	PF13041	360 - 407	7.9e-09	PPR repeat family
PPR	PF01535	363 - 393	7.4e-08	PPR repeat
PPR_3	PF13812	460 - 508	8.6e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	461 - 509	4.8e-13	PPR repeat family
PPR	PF01535	464 - 494	2.6e-06	PPR repeat
PPR_3	PF13812	486 - 544	8.3e-06	Pentatricopeptide repeat domain
E_motif	PF20431	579 - 640	2.8e-16	E motif
DYW_deaminase	PF14432	692 - 768	3.4e-31	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13270
fragaria_vesca	FvH4_4g22810
malus_domestica	MD13G1129400.v1.1
prunus_persica	Prupe.1G217000_v2.0.a1
pyrus_communis	pycom13g11240
rosa_chinensis	RchiOBHm_Chr4g0429041
rosa_laevigata	RLG00000007101
rosa_multiflora	Rmu_sc0008629.1_g000019
rosa_roxburghii	Rroxscaffold_5G00370690
rosa_rugosa	Rorug04G0232300
rosa_samantha	Rh4AG288300 Rh4BG294500 Rh4CG310000 Rh4DG291400
rosa_wichuraiana	Rw4G024990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	494, 665
AasI	GACNNNNNNGTC	1 cut(s)	283
AccBSI	CCGCTC	1 cut(s)	519
AccI	GTMKAC	1 cut(s)	812
AccII	CGCG	2 cut(s)	235, 237
AciI	CCGC	5 cut(s)	361, 426, 519, 1262, 1800
AclI	AACGTT	1 cut(s)	189
AclWI	GGATC	2 cut(s)	1611, 1925
AcoI	YGGCCR	2 cut(s)	270, 1126
AcsI	RAATTY	5 cut(s)	341, 635, 1037, 1240, 1489
AcuI	CTGAAG	3 cut(s)	266, 837, 1461
AfaI	GTAC	7 cut(s)	290, 367, 416, 1193, 1325, 1631, 2058
AfiI	CCNNNNNNNGG	4 cut(s)	118, 1135, 1783, 2158
AflII	CTTAAG	1 cut(s)	407
AflIII	ACRYGT	2 cut(s)	711, 2209
AgeI	ACCGGT	2 cut(s)	291, 1941
AjnI	CCWGG	2 cut(s)	195, 1394
Alw21I	GWGCWC	3 cut(s)	158, 1252, 1752
Alw26I	GTCTC	5 cut(s)	127, 689, 2101, 2218, 2241
AlwI	GGATC	2 cut(s)	1611, 1925
AlwNI	CAGNNNCTG	1 cut(s)	2181
AoxI	GGCC	6 cut(s)	261, 270, 575, 1126, 1392, 2178
ApeKI	GCWGC	4 cut(s)	40, 1763, 1856, 1911
ApoI	RAATTY	5 cut(s)	341, 635, 1037, 1240, 1489
AsiGI	ACCGGT	2 cut(s)	291, 1941
Asp700I	GAANNNNTTC	2 cut(s)	189, 2088
AspLEI	GCGC	3 cut(s)	235, 237, 406
AspS9I	GGNCC	2 cut(s)	1786, 2178
AsuC2I	CCSGG	1 cut(s)	175
AsuHPI	GGTGA	4 cut(s)	185, 583, 1046, 1552
AsuII	TTCGAA	1 cut(s)	1867
AvaII	GGWCC	1 cut(s)	1786
BalI	TGGCCA	1 cut(s)	1128
BanII	GRGCYC	2 cut(s)	1752, 2130
BauI	CACGAG	1 cut(s)	1635
BbsI	GAAGAC	1 cut(s)	24
Bbv12I	GWGCWC	3 cut(s)	158, 1252, 1752
BbvCI	CCTCAGC	1 cut(s)	139
BbvI	GCAGC	4 cut(s)	27, 1775, 1843, 1923
BceAI	ACGGC	3 cut(s)	257, 352, 714
BcgI	CGANNNNNNTGC	2 cut(s)	1350, 1384
BciT130I	CCWGG	2 cut(s)	197, 1396
BciVI	GTATCC	1 cut(s)	1725
BclI	TGATCA	1 cut(s)	757
BcnI	CCSGG	1 cut(s)	175
BcoDI	GTCTC	5 cut(s)	127, 689, 2101, 2218, 2241
BfaI	CTAG	4 cut(s)	744, 1010, 1803, 2111
BfmI	CTRYAG	3 cut(s)	1224, 1649, 2115
BfrI	CTTAAG	1 cut(s)	407
BfuI	GTATCC	1 cut(s)	1725
BglI	GCCNNNNNGGC	2 cut(s)	269, 1125
BisI	GCNGC	4 cut(s)	41, 1764, 1857, 1912
BlpI	GCTNAGC	1 cut(s)	2006
BlsI	GCNGC	4 cut(s)	42, 1765, 1858, 1913
Bme1390I	CCNGG	3 cut(s)	175, 197, 1396
Bme18I	GGWCC	1 cut(s)	1786
BmgT120I	GGNCC	2 cut(s)	1786, 2178
BmiI	GGNNCC	3 cut(s)	688, 1593, 1788
BmrFI	CCNGG	3 cut(s)	175, 197, 1396
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	8 cut(s)	391, 430, 637, 639, 1255, 1684, 1715, 1841
BmuI	ACTGGG	1 cut(s)	804
BpiI	GAAGAC	1 cut(s)	24
BpmI	CTGGAG	2 cut(s)	581, 1763
Bpu10I	CCTNAGC	1 cut(s)	139
Bpu1102I	GCTNAGC	1 cut(s)	2006
Bpu14I	TTCGAA	1 cut(s)	1867
BpuEI	CTTGAG	6 cut(s)	413, 893, 1166, 1236, 1766, 1912
BpuMI	CCSGG	1 cut(s)	175
Bsa29I	ATCGAT	2 cut(s)	1370, 1623
BsaBI	GATNNNNATC	1 cut(s)	627
BsaI	GGTCTC	1 cut(s)	127
BsaJI	CCNNGG	4 cut(s)	955, 1599, 2046, 2217
BsaWI	WCCGGW	2 cut(s)	291, 1941
BsaXI	ACNNNNNCTCC	2 cut(s)	127, 157
Bsc4I	CCNNNNNNNGG	4 cut(s)	118, 1135, 1783, 2158
Bse118I	RCCGGY	3 cut(s)	263, 291, 1941
Bse1I	ACTGG	4 cut(s)	28, 799, 2064, 2306
Bse3DI	GCAATG	3 cut(s)	1317, 1438, 1704
Bse8I	GATNNNNATC	1 cut(s)	627
BseBI	CCWGG	2 cut(s)	197, 1396
BseCI	ATCGAT	2 cut(s)	1370, 1623
BseDI	CCNNGG	4 cut(s)	955, 1599, 2046, 2217
BseGI	GGATG	7 cut(s)	445, 622, 742, 1270, 1730, 2029, 2059
BseJI	GATNNNNATC	1 cut(s)	627
BseLI	CCNNNNNNNGG	4 cut(s)	118, 1135, 1783, 2158
BseMI	GCAATG	3 cut(s)	1317, 1438, 1704
BseMII	CTCAG	4 cut(s)	153, 296, 846, 978
BseNI	ACTGG	4 cut(s)	28, 799, 2064, 2306
BsePI	GCGCGC	1 cut(s)	233
BseRI	GAGGAG	5 cut(s)	944, 996, 1151, 1766, 2063
BseXI	GCAGC	4 cut(s)	27, 1775, 1843, 1923
BseYI	CCCAGC	2 cut(s)	159, 829
BsgI	GTGCAG	1 cut(s)	1842
Bsh1236I	CGCG	2 cut(s)	235, 237
BshFI	GGCC	6 cut(s)	263, 272, 577, 1128, 1394, 2180
BshTI	ACCGGT	2 cut(s)	291, 1941
BshVI	ATCGAT	2 cut(s)	1370, 1623
BsiHKAI	GWGCWC	3 cut(s)	158, 1252, 1752
BsiSI	CCGG	4 cut(s)	174, 264, 292, 1942
BslI	CCNNNNNNNGG	4 cut(s)	118, 1135, 1783, 2158
BsmAI	GTCTC	5 cut(s)	127, 689, 2101, 2218, 2241
BsmBI	CGTCTC	1 cut(s)	689
BsmI	GAATGC	6 cut(s)	586, 652, 943, 1289, 1470, 2120
BsnI	GGCC	6 cut(s)	263, 272, 577, 1128, 1394, 2180
Bso31I	GGTCTC	1 cut(s)	127
Bsp119I	TTCGAA	1 cut(s)	1867
Bsp1286I	GDGCHC	4 cut(s)	158, 1252, 1752, 2130
Bsp143I	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
Bsp1720I	GCTNAGC	1 cut(s)	2006
Bsp19I	CCATGG	2 cut(s)	955, 2217
BspACI	CCGC	5 cut(s)	361, 426, 519, 1262, 1800
BspANI	GGCC	6 cut(s)	263, 272, 577, 1128, 1394, 2180
BspCNI	CTCAG	4 cut(s)	152, 295, 847, 979
BspDI	ATCGAT	2 cut(s)	1370, 1623
BspFNI	CGCG	2 cut(s)	235, 237
BspHI	TCATGA	1 cut(s)	2194
BspLI	GGNNCC	3 cut(s)	688, 1593, 1788
BspMAI	CTGCAG	1 cut(s)	1228
BspPI	GGATC	2 cut(s)	1611, 1925
BspT104I	TTCGAA	1 cut(s)	1867
BspTI	CTTAAG	1 cut(s)	407
BspTNI	GGTCTC	1 cut(s)	127
BsrBI	CCGCTC	1 cut(s)	519
BsrDI	GCAATG	3 cut(s)	1317, 1438, 1704
BsrFI	RCCGGY	3 cut(s)	263, 291, 1941
BsrI	ACTGG	4 cut(s)	28, 799, 2064, 2306
BssAI	RCCGGY	3 cut(s)	263, 291, 1941
BssECI	CCNNGG	4 cut(s)	955, 1599, 2046, 2217
BssHII	GCGCGC	1 cut(s)	233
BssMI	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
BssNAI	GTATAC	1 cut(s)	813
BssSI	CACGAG	1 cut(s)	1635
BssT1I	CCWWGG	2 cut(s)	955, 2217
Bst1107I	GTATAC	1 cut(s)	813
Bst2BI	CACGAG	1 cut(s)	1635
Bst2UI	CCWGG	2 cut(s)	197, 1396
Bst4CI	ACNGT	8 cut(s)	25, 370, 965, 1390, 1600, 1924, 2102, 2192
Bst6I	CTCTTC	1 cut(s)	368
BstAFI	CTTAAG	1 cut(s)	407
BstAPI	GCANNNNNTGC	1 cut(s)	1223
BstBI	TTCGAA	1 cut(s)	1867
BstC8I	GCNNGC	5 cut(s)	235, 265, 1051, 1219, 2182
BstDEI	CTNAG	5 cut(s)	139, 282, 855, 987, 2006
BstDSI	CCRYGG	3 cut(s)	955, 1599, 2217
BstF5I	GGATG	7 cut(s)	445, 622, 742, 1270, 1730, 2029, 2059
BstFNI	CGCG	2 cut(s)	235, 237
BstHHI	GCGC	3 cut(s)	235, 237, 406
BstKTI	GATC	5 cut(s)	501, 760, 1606, 1623, 1920
BstMAI	GTCTC	5 cut(s)	127, 689, 2101, 2218, 2241
BstMBI	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
BstNI	CCWGG	2 cut(s)	197, 1396
BstNSI	RCATGY	4 cut(s)	715, 918, 1221, 2213
BstSCI	CCNGG	3 cut(s)	173, 195, 1394
BstSFI	CTRYAG	3 cut(s)	1224, 1649, 2115
BstUI	CGCG	2 cut(s)	235, 237
BstV1I	GCAGC	4 cut(s)	27, 1775, 1843, 1923
BstV2I	GAAGAC	1 cut(s)	24
BstZ17I	GTATAC	1 cut(s)	813
Bsu15I	ATCGAT	2 cut(s)	1370, 1623
BsuI	GTATCC	1 cut(s)	1725
BsuRI	GGCC	6 cut(s)	263, 272, 577, 1128, 1394, 2180
BsuTUI	ATCGAT	2 cut(s)	1370, 1623
BtgI	CCRYGG	3 cut(s)	955, 1599, 2217
BtsCI	GGATG	7 cut(s)	445, 622, 742, 1270, 1730, 2029, 2059
BtsIMutI	CAGTG	4 cut(s)	375, 970, 1920, 2107
Cac8I	GCNNGC	5 cut(s)	235, 265, 1051, 1219, 2182
CaiI	CAGNNNCTG	1 cut(s)	2181
CciI	TCATGA	1 cut(s)	2194
CfoI	GCGC	3 cut(s)	235, 237, 406
Cfr10I	RCCGGY	3 cut(s)	263, 291, 1941
Cfr13I	GGNCC	2 cut(s)	1786, 2178
ClaI	ATCGAT	2 cut(s)	1370, 1623
CseI	GACGC	2 cut(s)	573, 1439
CsiI	ACCWGGT	1 cut(s)	195
Csp6I	GTAC	7 cut(s)	289, 366, 415, 1192, 1324, 1630, 2057
CspAI	ACCGGT	2 cut(s)	291, 1941
CviQI	GTAC	7 cut(s)	289, 366, 415, 1192, 1324, 1630, 2057
DdeI	CTNAG	5 cut(s)	139, 282, 855, 987, 2006
DpnI	GATC	5 cut(s)	500, 759, 1605, 1622, 1919
DpnII	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
DrdI	GACNNNNNNGTC	1 cut(s)	283
DseDI	GACNNNNNNGTC	1 cut(s)	283
EaeI	YGGCCR	2 cut(s)	270, 1126
Eam1104I	CTCTTC	1 cut(s)	368
EarI	CTCTTC	1 cut(s)	368
Ecl136II	GAGCTC	1 cut(s)	1750
Eco130I	CCWWGG	2 cut(s)	955, 2217
Eco24I	GRGCYC	2 cut(s)	1752, 2130
Eco31I	GGTCTC	1 cut(s)	127
Eco47I	GGWCC	1 cut(s)	1786
Eco53kI	GAGCTC	1 cut(s)	1750
Eco57I	CTGAAG	3 cut(s)	266, 837, 1461
EcoICRI	GAGCTC	1 cut(s)	1750
EcoO109I	RGGNCCY	1 cut(s)	2178
EcoRII	CCWGG	2 cut(s)	195, 1394
EcoT14I	CCWWGG	2 cut(s)	955, 2217
EcoT22I	ATGCAT	2 cut(s)	654, 1834
EcoT38I	GRGCYC	2 cut(s)	1752, 2130
ErhI	CCWWGG	2 cut(s)	955, 2217
Esp3I	CGTCTC	1 cut(s)	689
FalI	AAGNNNNNCTT	6 cut(s)	1999, 2031, 2022, 2054, 2073, 2105
FauI	CCCGC	1 cut(s)	419
FbaI	TGATCA	1 cut(s)	757
FblI	GTMKAC	1 cut(s)	812
Fnu4HI	GCNGC	4 cut(s)	41, 1764, 1857, 1912
FokI	GGATG	7 cut(s)	452, 629, 749, 1277, 1737, 2036, 2066
FriOI	GRGCYC	2 cut(s)	1752, 2130
Fsp4HI	GCNGC	4 cut(s)	41, 1764, 1857, 1912
FspBI	CTAG	4 cut(s)	744, 1010, 1803, 2111
GlaI	GCGC	3 cut(s)	234, 236, 405
GluI	GCNGC	4 cut(s)	41, 1764, 1857, 1912
GsaI	CCCAGC	2 cut(s)	163, 833
GsuI	CTGGAG	2 cut(s)	581, 1763
HaeIII	GGCC	6 cut(s)	263, 272, 577, 1128, 1394, 2180
HapII	CCGG	4 cut(s)	174, 264, 292, 1942
HgaI	GACGC	2 cut(s)	573, 1439
HhaI	GCGC	3 cut(s)	235, 237, 406
Hin6I	GCGC	3 cut(s)	233, 235, 404
HinP1I	GCGC	3 cut(s)	233, 235, 404
HindIII	AAGCTT	2 cut(s)	971, 1711
HpaII	CCGG	4 cut(s)	174, 264, 292, 1942
HphI	GGTGA	4 cut(s)	185, 583, 1046, 1552
Hpy166II	GTNNAC	6 cut(s)	97, 193, 314, 813, 1015, 1630
Hpy188I	TCNGA	6 cut(s)	246, 334, 762, 988, 1441, 1754
Hpy8I	GTNNAC	6 cut(s)	97, 193, 314, 813, 1015, 1630
Hpy99I	CGWCG	1 cut(s)	589
HpyAV	CCTTC	2 cut(s)	442, 939
HpyCH4III	ACNGT	8 cut(s)	25, 370, 965, 1390, 1600, 1924, 2102, 2192
HpyCH4IV	ACGT	2 cut(s)	189, 1861
HpyF3I	CTNAG	5 cut(s)	139, 282, 855, 987, 2006
HpySE526I	ACGT	2 cut(s)	189, 1861
HspAI	GCGC	3 cut(s)	233, 235, 404
KroI	GCCGGC	1 cut(s)	263
KroNI	GCCGGC	1 cut(s)	265
Ksp22I	TGATCA	1 cut(s)	757
Kzo9I	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
LmnI	GCTCC	3 cut(s)	56, 148, 1301
Lsp1109I	GCAGC	4 cut(s)	27, 1775, 1843, 1923
LweI	GCATC	8 cut(s)	391, 430, 637, 639, 1255, 1684, 1715, 1841
MabI	ACCWGGT	1 cut(s)	195
MaeI	CTAG	4 cut(s)	744, 1010, 1803, 2111
MaeII	ACGT	2 cut(s)	189, 1861
MaeIII	GTNAC	7 cut(s)	274, 959, 1177, 1495, 1540, 1805, 2221
MalI	GATC	5 cut(s)	500, 759, 1605, 1622, 1919
MbiI	CCGCTC	1 cut(s)	519
MboI	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
MboII	GAAGA	9 cut(s)	3, 24, 232, 385, 619, 830, 1862, 1881, 2042
MhlI	GDGCHC	4 cut(s)	158, 1252, 1752, 2130
MlsI	TGGCCA	1 cut(s)	1128
MluCI	AATT	9 cut(s)	341, 635, 1037, 1130, 1164, 1240, 1407, 1489, 1822
MluNI	TGGCCA	1 cut(s)	1128
MlyI	GAGTC	3 cut(s)	385, 854, 2243
MmeI	TCCRAC	4 cut(s)	594, 714, 979, 2277
Mox20I	TGGCCA	1 cut(s)	1128
Mph1103I	ATGCAT	2 cut(s)	654, 1834
MroNI	GCCGGC	1 cut(s)	263
MroXI	GAANNNNTTC	2 cut(s)	189, 2088
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	8 cut(s)	17, 128, 408, 969, 1062, 1163, 2166, 2271
MslI	CAYNNNNRTG	6 cut(s)	66, 657, 716, 1263, 1431, 1814
Msp20I	TGGCCA	1 cut(s)	1128
MspA1I	CMGCKG	2 cut(s)	1766, 1914
MspCI	CTTAAG	1 cut(s)	407
MspI	CCGG	4 cut(s)	174, 264, 292, 1942
MspR9I	CCNGG	3 cut(s)	175, 197, 1396
Mva1269I	GAATGC	6 cut(s)	586, 652, 943, 1289, 1470, 2120
MvaI	CCWGG	2 cut(s)	197, 1396
MvnI	CGCG	2 cut(s)	235, 237
NaeI	GCCGGC	1 cut(s)	265
NciI	CCSGG	1 cut(s)	175
NcoI	CCATGG	2 cut(s)	955, 2217
NdeII	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
NgoMIV	GCCGGC	1 cut(s)	263
NlaIV	GGNNCC	3 cut(s)	688, 1593, 1788
NmeAIII	GCCGAG	2 cut(s)	409, 1079
NmuCI	GTSAC	2 cut(s)	274, 1540
NsiI	ATGCAT	2 cut(s)	654, 1834
NspI	RCATGY	4 cut(s)	715, 918, 1221, 2213
NspV	TTCGAA	1 cut(s)	1867
PaeI	GCATGC	1 cut(s)	1221
PagI	TCATGA	1 cut(s)	2194
PauI	GCGCGC	1 cut(s)	233
PciI	ACATGT	2 cut(s)	711, 2209
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 1642
PctI	GAATGC	6 cut(s)	586, 652, 943, 1289, 1470, 2120
PdiI	GCCGGC	1 cut(s)	265
PdmI	GAANNNNTTC	2 cut(s)	189, 2088
PfeI	GAWTC	7 cut(s)	983, 1043, 1186, 1367, 1565, 2033, 2259
PinAI	ACCGGT	2 cut(s)	291, 1941
PkrI	GCNGC	4 cut(s)	42, 1765, 1858, 1913
PleI	GAGTC	3 cut(s)	384, 853, 2243
PpsI	GAGTC	3 cut(s)	384, 853, 2243
PscI	ACATGT	2 cut(s)	711, 2209
PsiI	TTATAA	2 cut(s)	494, 665
Psp124BI	GAGCTC	1 cut(s)	1752
Psp1406I	AACGTT	1 cut(s)	189
Psp6I	CCWGG	2 cut(s)	195, 1394
PspFI	CCCAGC	2 cut(s)	159, 829
PspGI	CCWGG	2 cut(s)	195, 1394
PspN4I	GGNNCC	3 cut(s)	688, 1593, 1788
PspPI	GGNCC	2 cut(s)	1786, 2178
PstI	CTGCAG	1 cut(s)	1228
PstNI	CAGNNNCTG	1 cut(s)	2181
PteI	GCGCGC	1 cut(s)	233
PvuII	CAGCTG	2 cut(s)	1766, 1914
RsaI	GTAC	7 cut(s)	290, 367, 416, 1193, 1325, 1631, 2058
RsaNI	GTAC	7 cut(s)	289, 366, 415, 1192, 1324, 1630, 2057
RseI	CAYNNNNRTG	6 cut(s)	66, 657, 716, 1263, 1431, 1814
SacI	GAGCTC	1 cut(s)	1752
SaqAI	TTAA	8 cut(s)	17, 128, 408, 969, 1062, 1163, 2166, 2271
SatI	GCNGC	4 cut(s)	41, 1764, 1857, 1912
Sau3AI	GATC	5 cut(s)	498, 757, 1603, 1620, 1917
Sau96I	GGNCC	2 cut(s)	1786, 2178
SchI	GAGTC	3 cut(s)	385, 854, 2243
ScrFI	CCNGG	3 cut(s)	175, 197, 1396
SduI	GDGCHC	4 cut(s)	158, 1252, 1752, 2130
SexAI	ACCWGGT	1 cut(s)	195
SfaNI	GCATC	8 cut(s)	391, 430, 637, 639, 1255, 1684, 1715, 1841
SfcI	CTRYAG	3 cut(s)	1224, 1649, 2115
SfiI	GGCCNNNNNGGCC	1 cut(s)	269
SfuI	TTCGAA	1 cut(s)	1867
SinI	GGWCC	1 cut(s)	1786
SmiMI	CAYNNNNRTG	6 cut(s)	66, 657, 716, 1263, 1431, 1814
SmlI	CTYRAG	7 cut(s)	392, 407, 908, 1145, 1251, 1745, 1891
SmoI	CTYRAG	7 cut(s)	392, 407, 908, 1145, 1251, 1745, 1891
SphI	GCATGC	1 cut(s)	1221
Sse9I	AATT	9 cut(s)	341, 635, 1037, 1130, 1164, 1240, 1407, 1489, 1822
SsiI	CCGC	5 cut(s)	361, 426, 519, 1262, 1800
SspMI	CTAG	4 cut(s)	744, 1010, 1803, 2111
SstI	GAGCTC	1 cut(s)	1752
StyD4I	CCNGG	3 cut(s)	173, 195, 1394
StyI	CCWWGG	2 cut(s)	955, 2217
TaaI	ACNGT	8 cut(s)	25, 370, 965, 1390, 1600, 1924, 2102, 2192
TaiI	ACGT	2 cut(s)	192, 1864
TasI	AATT	9 cut(s)	341, 635, 1037, 1130, 1164, 1240, 1407, 1489, 1822
TatI	WGTACW	5 cut(s)	365, 414, 1323, 1629, 2056
TfiI	GAWTC	7 cut(s)	983, 1043, 1186, 1367, 1565, 2033, 2259
Tru1I	TTAA	8 cut(s)	17, 128, 408, 969, 1062, 1163, 2166, 2271
Tru9I	TTAA	8 cut(s)	17, 128, 408, 969, 1062, 1163, 2166, 2271
TscAI	CASTG	4 cut(s)	375, 970, 1927, 2107
TseFI	GTSAC	2 cut(s)	274, 1540
TseI	GCWGC	4 cut(s)	40, 1763, 1856, 1911
Tsp45I	GTSAC	2 cut(s)	274, 1540
TspDTI	ATGAA	8 cut(s)	239, 269, 334, 474, 1080, 1089, 1247, 2043
TspGWI	ACGGA	2 cut(s)	679, 1179
TspRI	CASTG	4 cut(s)	375, 970, 1927, 2107
Vha464I	CTTAAG	1 cut(s)	407
VpaK11BI	GGWCC	1 cut(s)	1786
XapI	RAATTY	5 cut(s)	341, 635, 1037, 1240, 1489
XceI	RCATGY	4 cut(s)	715, 918, 1221, 2213
XmiI	GTMKAC	1 cut(s)	812
XmnI	GAANNNNTTC	2 cut(s)	189, 2088
XspI	CTAG	4 cut(s)	744, 1010, 1803, 2111
Zsp2I	ATGCAT	2 cut(s)	654, 1834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.