Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007900

Physical Location & Seq

Genomic Coordinates Reverse (-)

26569563 .. 26576066

Gene Structure 6504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g24380.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGAAGACCAAATCAAAGCCGAATTCATCAAGAGCGACTTCACCCTCGACCAAGAAGACGAAATCCTCAAGAAATGTCTCACTTTCTGCATCAATTACAAGCTCACGCCTTCGGATCTCGTTTCAAGCTGGGAAATTTACTACCTCAACAGGCAGTTAAATGAGCCGGTGGTTCGAGATGTCGAAATGGAAGGGTTCTTGCAGCATTTGCAGAATGAGCAGAAAGAAGCTATTAATAGTAAGGAGGAACCGGGTCTGCATATCTACTCAAGTAATGATGTGGACATGATTTTGAATGGTGAAGATGTAGATATAGAGGAAACAGTTCTTCACACTCCAATATCCAAATCCCAGAACCGTTATTCAGATTCATTCGACTCAACACCACAAACAAATGGGAACGTTCCTTCTTCTGGAAAACCAACAAAGCTTATAACCCCCTTTGGTAGGCGAACTGACAAGTTTGTTGTGAAATTTAGCATCGAGAATATGCCAAATACAGAGAATGTGAAGAAGGAAGATGAAAATGAGAATCAAGATGATGATGACATTATCAGGAGGGTTAAGCCTGGGAAGAGGTGTTCTTTAGTAGTCCATGGTTCAGGTCCTGAAATAGACTGTAGATTCATGTATGATAGGATTGCAGATAGGTTTAATGCACTGGAAAACCGAATATTAAAGCATGCAACTGAACTAGTTTCGTCCGGGCAGTATGAGGAACCAGTGGACCCAACAGTTTCTTCTGAGAAAAGTATATTTACTGTTGGGATGATCTGTTGTGACGGAGAAGGGCATCTGAACGAGAAGTCCACCTTGTTGCAAAGCAGTGCCGAACATTCTGGTGGCCAACGTGTACGTGTAGAGTTACACAATGTGAGCCAGTATTCAATCTTTCCAGGCCAGGTAGTAGGTATCGCTGGGCATAATCCTAGTGGGCATTGCTTCATTGCTTCCAAAATGATTGATTCAATCCCTTTATCTGCTGCTGCTGATGAAGACTTGCATCCCGCCAAAAAGCCAGCTTTGGATCCGGAGAGTTTGTCAATTGGTCTGGCCATTCCACAACCAGAGCTATCAGTGATCATTGCATCAGGTCCTTTTACCACGATTGACAACTTACTGTTTGAACCTCTGAAAGAGCTGCTAGCATATGCAAACAGAAAGCTCCCTCAGTTGCTTATATTGCTAGGACCATTTATTGATTCAGAACATCCAGAAATTAAGAAAGGCAATGTTGACAGGACCTTTGATGACATATTCCAATTTGAAATTTTAAGAAGGTTGCAAGATTACGCAGAATACATGGGTTCACATGCACGTGTCGTTCTTGTACCATCTGTACGTGATGCTAACCATGACTTTGTTTTTCCTCAGCCTCCCTTTGATATTCATCCTCCAGATCTCAAACATCAGATAACCAGTCTCACAAATCCAGGAATGTTAGAGGCAAATCAGGTCAAGATAGGTTGCTGCTCTGTGGATATTCTTAAACATCTTAGCGGAGAGGAGACCTCACGTTTTCCAAAGGATGGAACATCCCGTGATCGCATGAGTAGACTTGCAAACCATATACTCGGCCAACGCAGCTTTTATCCTTTATATCCACCAGCAGAAAGTGTTCCATTGGATTTTTCACTTGCTCCAGAAGCTCTAAACATCTCATTGATCCCAGACATTCTCATCCTACCCTCTGACTTGAAGTATTTTGTAAAGGTGCTCTCCCTTGGTGAAGGAGAACCGCCAGTTAAATGCATCTGTGTCAATCCTGGAAGACTCTCAAAGGGAGAAGGAGGAGGTGGACTGATCTTCTCATTACCTGCATCAATTACCATTTTTGAATCCTCGCTTTTGGCTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000082 GO:0000228 GO:0000278 GO:0000428 GO:0000723 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005658 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0019725 GO:0022402 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032200 GO:0032201 GO:0032991 GO:0032993 GO:0033260 GO:0034641 GO:0034645 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044843 GO:0046483 GO:0046982 GO:0046983 GO:0051276 GO:0055029 GO:0060249 GO:0061695 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_E_B Pol_alpha_B_N

Protein Analysis

620

Amino Acids

68.91

Weight (kDa)

5.01

Isoelectric Point (pI)

49.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pol_alpha_B_N	PF08418	4 - 50	3.5e-06	DNA polymerase alpha subunit B N-terminal
OB_DPOA2	PF22062	222 - 321	3.7e-23	DNA polymerase alpha subunit B, OB domain
DNA_pol_E_B	PF04042	360 - 571	1.6e-49	DNA polymerase alpha/epsilon subunit B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67630
fragaria_vesca	FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380
malus_domestica	MD13G1111800.v1.1 MD16G1111400.v1.1
prunus_persica	Prupe.1G233700_v2.0.a1 Prupe.1G233700_v2.0.a1
pyrus_communis	pycom13g09720 pycom16g09440
rosa_chinensis	RchiOBHm_Chr4g0431221
rosa_laevigata	RLG00000006918
rosa_multiflora	Rmu_sc0005258.1_g000007
rosa_roxburghii	Rroxscaffold_5G00372760
rosa_rugosa	Rorug04G0249200 Rorug04G0249200
rosa_samantha	Rh4BG312700 Rh4CG329000 Rh4DG309300
rosa_wichuraiana	Rw4G026540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	434
Acc36I	ACCTGC	1 cut(s)	1825
AccB7I	CCANNNNNTGG	1 cut(s)	1529
AccI	GTMKAC	1 cut(s)	1555
AccIII	TCCGGA	1 cut(s)	1030
AciI	CCGC	3 cut(s)	1008, 1500, 1739
AclI	AACGTT	1 cut(s)	402
AclWI	GGATC	4 cut(s)	123, 1022, 1035, 1660
AcoI	YGGCCR	3 cut(s)	844, 1053, 1576
AcsI	RAATTY	4 cut(s)	23, 135, 473, 1269
AcvI	CACGTG	1 cut(s)	1319
AdeI	CACNNNGTG	1 cut(s)	874
AfaI	GTAC	3 cut(s)	855, 1332, 1341
AfiI	CCNNNNNNNGG	3 cut(s)	413, 447, 1529
AflIII	ACRYGT	3 cut(s)	850, 856, 1318
AgsI	TTSAA	8 cut(s)	126, 295, 888, 969, 1127, 1268, 1699, 1838
AhlI	ACTAGT	1 cut(s)	694
AjnI	CCWGG	5 cut(s)	568, 895, 900, 1432, 1765
AjuI	GAANNNNNNNTTGG	2 cut(s)	724, 756
AloI	GAACNNNNNNTCC	4 cut(s)	565, 597, 791, 823
Alw21I	GWGCWC	1 cut(s)	1719
Alw26I	GTCTC	3 cut(s)	83, 1427, 1502
AlwI	GGATC	4 cut(s)	123, 1022, 1035, 1660
AlwNI	CAGNNNCTG	1 cut(s)	608
Aor13HI	TCCGGA	1 cut(s)	1030
AoxI	GGCC	4 cut(s)	844, 898, 1053, 1576
ApeKI	GCWGC	6 cut(s)	202, 983, 986, 1141, 1470, 1584
ApoI	RAATTY	4 cut(s)	23, 135, 473, 1269
ArsI	GACNNNNNNTTYG	2 cut(s)	1229, 1261
AseI	ATTAAT	1 cut(s)	234
Asp700I	GAANNNNTTC	2 cut(s)	324, 1617
AspS9I	GGNCC	5 cut(s)	605, 727, 1094, 1190, 1242
AsuC2I	CCSGG	2 cut(s)	252, 706
AsuHPI	GGTGA	3 cut(s)	34, 311, 1739
AsuNHI	GCTAGC	1 cut(s)	1144
AvaII	GGWCC	5 cut(s)	605, 727, 1094, 1190, 1242
BalI	TGGCCA	2 cut(s)	846, 1055
BamHI	GGATCC	1 cut(s)	1027
BbrPI	CACGTG	1 cut(s)	1319
BbsI	GAAGAC	4 cut(s)	12, 63, 1002, 1777
Bbv12I	GWGCWC	1 cut(s)	1719
BbvCI	CCTCAGC	1 cut(s)	1371
BbvI	GCAGC	6 cut(s)	214, 970, 973, 1128, 1457, 1596
BccI	CCATC	2 cut(s)	1342, 1523
BciT130I	CCWGG	5 cut(s)	570, 897, 902, 1434, 1767
BclI	TGATCA	1 cut(s)	1080
BcnI	CCSGG	2 cut(s)	252, 706
BcoDI	GTCTC	3 cut(s)	83, 1427, 1502
BcuI	ACTAGT	1 cut(s)	694
BfaI	CTAG	5 cut(s)	695, 930, 1145, 1187, 1854
BfmI	CTRYAG	1 cut(s)	619
BfuAI	ACCTGC	1 cut(s)	1825
BglII	AGATCT	1 cut(s)	1399
BisI	GCNGC	6 cut(s)	203, 984, 987, 1142, 1471, 1585
BlsI	GCNGC	6 cut(s)	204, 985, 988, 1143, 1472, 1586
Bme1390I	CCNGG	7 cut(s)	252, 570, 706, 897, 902, 1434, 1767
Bme18I	GGWCC	5 cut(s)	605, 727, 1094, 1190, 1242
BmgT120I	GGNCC	5 cut(s)	605, 727, 1094, 1190, 1242
BmiI	GGNNCC	4 cut(s)	249, 720, 729, 1029
BmrFI	CCNGG	7 cut(s)	252, 570, 706, 897, 902, 1434, 1767
BmsI	GCATC	8 cut(s)	99, 489, 802, 1012, 1097, 1336, 1761, 1829
BmtI	GCTAGC	1 cut(s)	1148
BpiI	GAAGAC	4 cut(s)	12, 63, 1002, 1777
BplI	GAGNNNNNCTC	2 cut(s)	1496, 1528
BpmI	CTGGAG	2 cut(s)	1380, 1626
Bpu10I	CCTNAGC	1 cut(s)	1371
BpuEI	CTTGAG	2 cut(s)	53, 253
BpuMI	CCSGG	2 cut(s)	252, 706
BsaAI	YACGTR	3 cut(s)	857, 1319, 1343
BsaBI	GATNNNNATC	1 cut(s)	1389
BsaI	GGTCTC	1 cut(s)	1502
BsaJI	CCNNGG	3 cut(s)	569, 595, 1723
BsaWI	WCCGGW	1 cut(s)	1030
BsaXI	ACNNNNNCTCC	2 cut(s)	1025, 1055
Bsc4I	CCNNNNNNNGG	3 cut(s)	413, 447, 1529
Bse118I	RCCGGY	1 cut(s)	166
Bse1I	ACTGG	5 cut(s)	666, 722, 880, 1419, 1742
Bse3DI	GCAATG	4 cut(s)	937, 945, 1083, 1237
Bse8I	GATNNNNATC	1 cut(s)	1389
BseAI	TCCGGA	1 cut(s)	1030
BseBI	CCWGG	5 cut(s)	570, 897, 902, 1434, 1767
BseDI	CCNNGG	3 cut(s)	569, 595, 1723
BseGI	GGATG	7 cut(s)	774, 1003, 1210, 1390, 1534, 1535, 1680
BseJI	GATNNNNATC	1 cut(s)	1389
BseLI	CCNNNNNNNGG	3 cut(s)	413, 447, 1529
BseMI	GCAATG	4 cut(s)	937, 945, 1083, 1237
BseMII	CTCAG	3 cut(s)	735, 1184, 1385
BseNI	ACTGG	5 cut(s)	666, 722, 880, 1419, 1742
BseRI	GAGGAG	2 cut(s)	1520, 1806
BseXI	GCAGC	6 cut(s)	214, 970, 973, 1128, 1457, 1596
BseYI	CCCAGC	2 cut(s)	129, 917
BshFI	GGCC	4 cut(s)	846, 900, 1055, 1578
BsiHKAI	GWGCWC	1 cut(s)	1719
BsiSI	CCGG	4 cut(s)	167, 251, 705, 1031
BslI	CCNNNNNNNGG	3 cut(s)	413, 447, 1529
BsmAI	GTCTC	3 cut(s)	83, 1427, 1502
BsnI	GGCC	4 cut(s)	846, 900, 1055, 1578
Bso31I	GGTCTC	1 cut(s)	1502
Bsp1286I	GDGCHC	1 cut(s)	1719
Bsp13I	TCCGGA	1 cut(s)	1030
Bsp143I	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
Bsp19I	CCATGG	1 cut(s)	595
BspACI	CCGC	3 cut(s)	1008, 1500, 1739
BspANI	GGCC	4 cut(s)	846, 900, 1055, 1578
BspCNI	CTCAG	3 cut(s)	736, 1183, 1384
BspEI	TCCGGA	1 cut(s)	1030
BspLI	GGNNCC	4 cut(s)	249, 720, 729, 1029
BspMI	ACCTGC	1 cut(s)	1825
BspOI	GCTAGC	1 cut(s)	1148
BspPI	GGATC	4 cut(s)	123, 1022, 1035, 1660
BspTNI	GGTCTC	1 cut(s)	1502
BsrDI	GCAATG	4 cut(s)	937, 945, 1083, 1237
BsrFI	RCCGGY	1 cut(s)	166
BsrI	ACTGG	5 cut(s)	666, 722, 880, 1419, 1742
BssAI	RCCGGY	1 cut(s)	166
BssECI	CCNNGG	3 cut(s)	569, 595, 1723
BssMI	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
BssT1I	CCWWGG	2 cut(s)	595, 1723
Bst2UI	CCWGG	5 cut(s)	570, 897, 902, 1434, 1767
Bst4CI	ACNGT	6 cut(s)	325, 359, 620, 736, 763, 1122
Bst6I	CTCTTC	1 cut(s)	569
BstAPI	GCANNNNNTGC	1 cut(s)	208
BstBAI	YACGTR	3 cut(s)	857, 1319, 1343
BstC8I	GCNNGC	3 cut(s)	684, 1020, 1146
BstDEI	CTNAG	4 cut(s)	744, 1170, 1371, 1496
BstDSI	CCRYGG	1 cut(s)	595
BstENI	CCTNNNNNAGG	1 cut(s)	445
BstF5I	GGATG	7 cut(s)	774, 1003, 1210, 1390, 1534, 1535, 1680
BstKTI	GATC	8 cut(s)	118, 774, 1030, 1083, 1402, 1546, 1668, 1806
BstMAI	GTCTC	3 cut(s)	83, 1427, 1502
BstMBI	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
BstMWI	GCNNNNNNNGC	5 cut(s)	208, 217, 1183, 1584, 1646
BstNI	CCWGG	5 cut(s)	570, 897, 902, 1434, 1767
BstNSI	RCATGY	2 cut(s)	686, 1316
BstSCI	CCNGG	7 cut(s)	250, 568, 704, 895, 900, 1432, 1765
BstSFI	CTRYAG	1 cut(s)	619
BstV1I	GCAGC	6 cut(s)	214, 970, 973, 1128, 1457, 1596
BstV2I	GAAGAC	4 cut(s)	12, 63, 1002, 1777
BstX2I	RGATCY	3 cut(s)	115, 1027, 1399
BstYI	RGATCY	3 cut(s)	115, 1027, 1399
BsuRI	GGCC	4 cut(s)	846, 900, 1055, 1578
BtgI	CCRYGG	1 cut(s)	595
BtsCI	GGATG	7 cut(s)	774, 1003, 1210, 1390, 1534, 1535, 1680
BtsI	GCAGTG	1 cut(s)	832
BtsIMutI	CAGTG	4 cut(s)	659, 729, 832, 1083
BveI	ACCTGC	1 cut(s)	1825
Cac8I	GCNNGC	3 cut(s)	684, 1020, 1146
CaiI	CAGNNNCTG	1 cut(s)	608
Cfr10I	RCCGGY	1 cut(s)	166
Cfr13I	GGNCC	5 cut(s)	605, 727, 1094, 1190, 1242
Csp6I	GTAC	3 cut(s)	854, 1331, 1340
CviAII	CATG	8 cut(s)	286, 596, 628, 683, 1303, 1313, 1355, 1549
CviQI	GTAC	3 cut(s)	854, 1331, 1340
DdeI	CTNAG	4 cut(s)	744, 1170, 1371, 1496
DpnI	GATC	8 cut(s)	117, 773, 1029, 1082, 1401, 1545, 1667, 1805
DpnII	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
DraIII	CACNNNGTG	1 cut(s)	874
EaeI	YGGCCR	3 cut(s)	844, 1053, 1576
Eam1104I	CTCTTC	1 cut(s)	569
EarI	CTCTTC	1 cut(s)	569
Eco130I	CCWWGG	2 cut(s)	595, 1723
Eco31I	GGTCTC	1 cut(s)	1502
Eco47I	GGWCC	5 cut(s)	605, 727, 1094, 1190, 1242
Eco72I	CACGTG	1 cut(s)	1319
EcoNI	CCTNNNNNAGG	1 cut(s)	445
EcoO109I	RGGNCCY	3 cut(s)	605, 1094, 1242
EcoRI	GAATTC	1 cut(s)	23
EcoRII	CCWGG	5 cut(s)	568, 895, 900, 1432, 1765
EcoT14I	CCWWGG	2 cut(s)	595, 1723
EcoT22I	ATGCAT	1 cut(s)	1754
ErhI	CCWWGG	2 cut(s)	595, 1723
FaeI	CATG	8 cut(s)	289, 599, 631, 686, 1306, 1316, 1358, 1552
FalI	AAGNNNNNCTT	4 cut(s)	23, 55, 797, 829
FatI	CATG	8 cut(s)	285, 595, 627, 682, 1302, 1312, 1354, 1548
FauI	CCCGC	1 cut(s)	1015
FauNDI	CATATG	1 cut(s)	1150
FbaI	TGATCA	1 cut(s)	1080
FblI	GTMKAC	1 cut(s)	1555
Fnu4HI	GCNGC	6 cut(s)	203, 984, 987, 1142, 1471, 1585
FokI	GGATG	7 cut(s)	781, 990, 1197, 1377, 1522, 1541, 1667
Fsp4HI	GCNGC	6 cut(s)	203, 984, 987, 1142, 1471, 1585
FspBI	CTAG	5 cut(s)	695, 930, 1145, 1187, 1854
GluI	GCNGC	6 cut(s)	203, 984, 987, 1142, 1471, 1585
GsaI	CCCAGC	2 cut(s)	133, 921
GsuI	CTGGAG	2 cut(s)	1380, 1626
HaeIII	GGCC	4 cut(s)	846, 900, 1055, 1578
HapII	CCGG	4 cut(s)	167, 251, 705, 1031
Hin1II	CATG	8 cut(s)	289, 599, 631, 686, 1306, 1316, 1358, 1552
HincII	GTYRAC	1 cut(s)	1237
HindII	GTYRAC	1 cut(s)	1237
HindIII	AAGCTT	1 cut(s)	428
HinfI	GANTC	8 cut(s)	368, 377, 532, 624, 965, 1202, 1773, 1838
HpaII	CCGG	4 cut(s)	167, 251, 705, 1031
HphI	GGTGA	3 cut(s)	34, 311, 1739
Hpy166II	GTNNAC	8 cut(s)	283, 727, 810, 854, 1237, 1310, 1556, 1799
Hpy188I	TCNGA	8 cut(s)	115, 367, 745, 798, 1134, 1207, 1413, 1693
Hpy8I	GTNNAC	8 cut(s)	283, 727, 810, 854, 1237, 1310, 1556, 1799
HpyAV	CCTTC	8 cut(s)	120, 185, 417, 508, 782, 1272, 1724, 1781
HpyCH4III	ACNGT	6 cut(s)	325, 359, 620, 736, 763, 1122
HpyCH4IV	ACGT	6 cut(s)	402, 850, 856, 1318, 1342, 1516
HpyF10VI	GCNNNNNNNGC	5 cut(s)	208, 217, 1183, 1584, 1646
HpyF3I	CTNAG	4 cut(s)	744, 1170, 1371, 1496
HpySE526I	ACGT	6 cut(s)	402, 850, 856, 1318, 1342, 1516
Hsp92II	CATG	8 cut(s)	289, 599, 631, 686, 1306, 1316, 1358, 1552
Kpn2I	TCCGGA	1 cut(s)	1030
Ksp22I	TGATCA	1 cut(s)	1080
Kzo9I	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
LmnI	GCTCC	2 cut(s)	1170, 1645
Lsp1109I	GCAGC	6 cut(s)	214, 970, 973, 1128, 1457, 1596
LweI	GCATC	8 cut(s)	99, 489, 802, 1012, 1097, 1336, 1761, 1829
MaeI	CTAG	5 cut(s)	695, 930, 1145, 1187, 1854
MaeII	ACGT	6 cut(s)	402, 850, 856, 1318, 1342, 1516
MaeIII	GTNAC	2 cut(s)	779, 864
MalI	GATC	8 cut(s)	117, 773, 1029, 1082, 1401, 1545, 1667, 1805
MboI	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
MfeI	CAATTG	1 cut(s)	1044
MflI	RGATCY	3 cut(s)	115, 1027, 1399
MhlI	GDGCHC	1 cut(s)	1719
MlsI	TGGCCA	2 cut(s)	846, 1055
MluCI	AATT	9 cut(s)	23, 94, 135, 473, 1044, 1218, 1262, 1269, 1824
MluNI	TGGCCA	2 cut(s)	846, 1055
MlyI	GAGTC	2 cut(s)	371, 1767
Mox20I	TGGCCA	2 cut(s)	846, 1055
Mph1103I	ATGCAT	1 cut(s)	1754
MroI	TCCGGA	1 cut(s)	1030
MroXI	GAANNNNTTC	2 cut(s)	324, 1617
MscI	TGGCCA	2 cut(s)	846, 1055
MseI	TTAA	9 cut(s)	158, 234, 564, 654, 677, 1221, 1274, 1488, 1746
MslI	CAYNNNNRTG	2 cut(s)	840, 1317
Msp20I	TGGCCA	2 cut(s)	846, 1055
MspI	CCGG	4 cut(s)	167, 251, 705, 1031
MspR9I	CCNGG	7 cut(s)	252, 570, 706, 897, 902, 1434, 1767
MunI	CAATTG	1 cut(s)	1044
MvaI	CCWGG	5 cut(s)	570, 897, 902, 1434, 1767
MwoI	GCNNNNNNNGC	5 cut(s)	208, 217, 1183, 1584, 1646
NciI	CCSGG	2 cut(s)	252, 706
NcoI	CCATGG	1 cut(s)	595
NdeI	CATATG	1 cut(s)	1150
NdeII	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
NheI	GCTAGC	1 cut(s)	1144
NlaIII	CATG	8 cut(s)	289, 599, 631, 686, 1306, 1316, 1358, 1552
NlaIV	GGNNCC	4 cut(s)	249, 720, 729, 1029
NmeAIII	GCCGAG	1 cut(s)	1554
NmuCI	GTSAC	1 cut(s)	779
NsiI	ATGCAT	1 cut(s)	1754
NspI	RCATGY	2 cut(s)	686, 1316
PaeI	GCATGC	1 cut(s)	686
PdmI	GAANNNNTTC	2 cut(s)	324, 1617
PfeI	GAWTC	6 cut(s)	368, 532, 624, 965, 1202, 1838
PflMI	CCANNNNNTGG	1 cut(s)	1529
PfoI	TCCNGGA	2 cut(s)	1432, 1765
PkrI	GCNGC	6 cut(s)	204, 985, 988, 1143, 1472, 1586
PleI	GAGTC	2 cut(s)	371, 1767
PmaCI	CACGTG	1 cut(s)	1319
PmlI	CACGTG	1 cut(s)	1319
PpsI	GAGTC	2 cut(s)	371, 1767
Ppu21I	YACGTR	3 cut(s)	857, 1319, 1343
PpuMI	RGGWCCY	3 cut(s)	605, 1094, 1242
PshBI	ATTAAT	1 cut(s)	234
PsiI	TTATAA	1 cut(s)	434
Psp1406I	AACGTT	1 cut(s)	402
Psp5II	RGGWCCY	3 cut(s)	605, 1094, 1242
Psp6I	CCWGG	5 cut(s)	568, 895, 900, 1432, 1765
PspCI	CACGTG	1 cut(s)	1319
PspFI	CCCAGC	2 cut(s)	129, 917
PspGI	CCWGG	5 cut(s)	568, 895, 900, 1432, 1765
PspN4I	GGNNCC	4 cut(s)	249, 720, 729, 1029
PspPI	GGNCC	5 cut(s)	605, 727, 1094, 1190, 1242
PspPPI	RGGWCCY	3 cut(s)	605, 1094, 1242
PstNI	CAGNNNCTG	1 cut(s)	608
PsuI	RGATCY	3 cut(s)	115, 1027, 1399
RsaI	GTAC	3 cut(s)	855, 1332, 1341
RsaNI	GTAC	3 cut(s)	854, 1331, 1340
RseI	CAYNNNNRTG	2 cut(s)	840, 1317
SaqAI	TTAA	9 cut(s)	158, 234, 564, 654, 677, 1221, 1274, 1488, 1746
SatI	GCNGC	6 cut(s)	203, 984, 987, 1142, 1471, 1585
Sau3AI	GATC	8 cut(s)	115, 771, 1027, 1080, 1399, 1543, 1665, 1803
Sau96I	GGNCC	5 cut(s)	605, 727, 1094, 1190, 1242
SchI	GAGTC	2 cut(s)	371, 1767
ScrFI	CCNGG	7 cut(s)	252, 570, 706, 897, 902, 1434, 1767
SduI	GDGCHC	1 cut(s)	1719
SfaNI	GCATC	8 cut(s)	99, 489, 802, 1012, 1097, 1336, 1761, 1829
SfcI	CTRYAG	1 cut(s)	619
SinI	GGWCC	5 cut(s)	605, 727, 1094, 1190, 1242
SmiMI	CAYNNNNRTG	2 cut(s)	840, 1317
SmlI	CTYRAG	2 cut(s)	68, 268
SmoI	CTYRAG	2 cut(s)	68, 268
SpeI	ACTAGT	1 cut(s)	694
SphI	GCATGC	1 cut(s)	686
Sse9I	AATT	9 cut(s)	23, 94, 135, 473, 1044, 1218, 1262, 1269, 1824
SsiI	CCGC	3 cut(s)	1008, 1500, 1739
SspI	AATATT	1 cut(s)	675
SspMI	CTAG	5 cut(s)	695, 930, 1145, 1187, 1854
StyD4I	CCNGG	7 cut(s)	250, 568, 704, 895, 900, 1432, 1765
StyI	CCWWGG	2 cut(s)	595, 1723
TaaI	ACNGT	6 cut(s)	325, 359, 620, 736, 763, 1122
TaiI	ACGT	6 cut(s)	405, 853, 859, 1321, 1345, 1519
TaqI	TCGA	5 cut(s)	48, 175, 183, 375, 483
TasI	AATT	9 cut(s)	23, 94, 135, 473, 1044, 1218, 1262, 1269, 1824
TfiI	GAWTC	6 cut(s)	368, 532, 624, 965, 1202, 1838
Tru1I	TTAA	9 cut(s)	158, 234, 564, 654, 677, 1221, 1274, 1488, 1746
Tru9I	TTAA	9 cut(s)	158, 234, 564, 654, 677, 1221, 1274, 1488, 1746
TscAI	CASTG	4 cut(s)	666, 729, 832, 1083
TseFI	GTSAC	1 cut(s)	779
TseI	GCWGC	6 cut(s)	202, 983, 986, 1141, 1470, 1584
Tsp45I	GTSAC	1 cut(s)	779
TspDTI	ATGAA	7 cut(s)	16, 360, 537, 616, 934, 1008, 1379
TspGWI	ACGGA	1 cut(s)	798
TspRI	CASTG	4 cut(s)	666, 729, 832, 1083
Van91I	CCANNNNNTGG	1 cut(s)	1529
VpaK11BI	GGWCC	5 cut(s)	605, 727, 1094, 1190, 1242
VspI	ATTAAT	1 cut(s)	234
XagI	CCTNNNNNAGG	1 cut(s)	445
XapI	RAATTY	4 cut(s)	23, 135, 473, 1269
XceI	RCATGY	2 cut(s)	686, 1316
XmiI	GTMKAC	1 cut(s)	1555
XmnI	GAANNNNTTC	2 cut(s)	324, 1617
XspI	CTAG	5 cut(s)	695, 930, 1145, 1187, 1854
Zsp2I	ATGCAT	1 cut(s)	1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.