Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0007900

Physical Location & Seq

Genomic Coordinates Forward (+)

6500697 .. 6504989

Gene Structure 4293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g09720.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGCCAATGTTTACAGTGGCAGTTTCTGAAACCCTAGAGAGAGAGAGAGAGAGAACCAGAGCGCGCAACATGGAAGGCCAAATCAAAGAGGAGTTCAGCAGCAGCGGTTTCACTTTCGACGACGAAAAGGAAATCCTAAAGAAATGTGCTACATTCTGCATAAATTTGAGTCTTTCGCCTTCCGATCTCGTTACGAGCTGGGAAATTTACTACCTCAACAGGCAAATGAATGGAACGGTGGTACACGATGTGGAAATGGATGGGTTTTTAGGGTATTTGCAAGAACAGAAGAAAGTAGCCATCGATGAACCAGAGCCCAATCTGCATATCTACTCAAGCAGAGATGTGGACATGATTCTGAATGATGAGTATGTAGATATAAAGGACGAGGTTCCTAGCACTCCACCATCCGAATCTCAGAACCATTACTCAGAGACATCTGACTCAACGCCACAAACAATTGGGAGCGTTCCTTCTTCTGGAAAACGATCAAGACTTGTAACTCCCTTTGGGCGACGAACAGACAAGTTTGTTGTGAAATTCAGCATCAATAATAAGCCAAATATAGAGAATGGGGAGAAGGAAGGTAATGAGAATCCTGGGGATGATGAATTCATCAGGAAGGTTAAACCTGGAAAGCGGTGTTCTTTAGTAATCCATGGTTCAGGACCTGAAACAGGTTGTAGGTTTATGTACGATAGAATTGAAGATAGGTTTAACGCACTTGAAAACCGAATTCGAAAGTATGCAACTGCATTAGTTTCATCTGGCCAGTATGAGGAACCACTGGACCCTACAGTTTCGTCTCAGAAAATTATATTTACTGCTGGCATGATCTGTTGTGACGGAGAGGGCCATTTGAACGACAAATCCACCTTGTTGCAGTGCAGTGCAGAGCATTCTGGAGGCCAACGTGTTCGTATGGAATTACAACATTTGAGCCAATTTTCAATATTTCCAGGCCAGATAGTAGGTTTTGAAGGGACCAATCCTAGTGGACACTGCTTCATTGCTTCAAAATTGATAGATTCAGTCCCTTTACCTGTTGCTGCTGATGCAAACTTGCCTCCTGCTAAAAAGCAAGCTTTGGATCATGAGATTTTGCCAACTGATCAGTCCATTAAACAACTAGAGCTATCAGTAATCATCGCATCAGGTCCTTTTACCACAACAGACAACTTATTGTTTGAGCCTCTGAAAGAGCTTCTAGCATATGCAAGCAAAAGGCTGCCTCAGTTGCTTATATTGCTAGGACCATTTATTGATTCTGAACATCCAGAAATTAAGAAAGGAACAGTCGACAGGAGCTTTGATGAAATATTCGAAACTGAGATTCTTAGAAAGTTGCAAGATCATGTTGAATACATGGGTTCGCATGCACGCATTGTTCTTGTACCATCTATACGGGATGCTAACCACGATCTTGTTTTCCCTCAGCCTGCCTTTGATATTCATCCACCTGATCTTAAGCATCAGATAACCAGTCTCACAAATCCAGGGATTTTCGAGGCAGATCAGGTCAAGATAGGTTGCTGCTCTCTGGATGTTCTCAAACACCTTAGTGCAGAAGAGATTTCGCGTGTTCCTAAGGGTGGAAAAACCAGTGACCGCATGAGTAGACTTGCAAACCATATAATTAGCCAACGCAGCTTTTATCCTCTGTATCCACCAGCAGAAGACACTCCATTGGATTTTTCGCTTGCTCCCGAAGCTCTAAACATCTCATTGATCCCAGATATTCTCATCTTACCCTCTGACATGAAGTATTTTGTGAAGGTACTGAACCTAGGCGAAAGAGGTGAAGAGATCGATCAGGTTAAATGCATTTGTGTCAATCCGGGAAGACTTGCCAAGGGAGAAGGAGGAGGTACTTTTGTCGAGCTTGAGTACTACGGTAATCCTGACACAACGAATGCTTCGATTGTAAGCATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000082 GO:0000228 GO:0000278 GO:0000428 GO:0000723 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005658 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0019725 GO:0022402 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032200 GO:0032201 GO:0032991 GO:0032993 GO:0033260 GO:0034641 GO:0034645 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044843 GO:0046483 GO:0046982 GO:0046983 GO:0051276 GO:0055029 GO:0060249 GO:0061695 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_E_B Pol_alpha_B_N

Protein Analysis

645

Amino Acids

71.83

Weight (kDa)

5.11

Isoelectric Point (pI)

47.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67630
fragaria_vesca	FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380 FvH4_4g24380
malus_domestica	MD13G1111800.v1.1 MD16G1111400.v1.1
prunus_persica	Prupe.1G233700_v2.0.a1 Prupe.1G233700_v2.0.a1
pyrus_communis	pycom13g09720 pycom16g09440
rosa_chinensis	RchiOBHm_Chr4g0431221
rosa_laevigata	RLG00000006918
rosa_multiflora	Rmu_sc0005258.1_g000007
rosa_roxburghii	Rroxscaffold_5G00372760
rosa_rugosa	Rorug04G0249200 Rorug04G0249200
rosa_samantha	Rh4BG312700 Rh4CG329000 Rh4DG309300
rosa_wichuraiana	Rw4G026540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	1299, 1618
AccII	CGCG	2 cut(s)	64, 1579
AciI	CCGC	3 cut(s)	105, 640, 1609
AclWI	GGATC	2 cut(s)	1098, 1723
AcoI	YGGCCR	1 cut(s)	769
AcsI	RAATTY	5 cut(s)	163, 204, 539, 611, 735
AdeI	CACNNNGTG	1 cut(s)	250
AfaI	GTAC	6 cut(s)	243, 695, 1395, 1779, 1870, 1889
AfiI	CCNNNNNNNGG	4 cut(s)	479, 677, 778, 1592
AflII	CTTAAG	1 cut(s)	1466
AflIII	ACRYGT	1 cut(s)	913
AgsI	TTSAA	7 cut(s)	707, 728, 862, 951, 980, 1017, 1361
AjnI	CCWGG	4 cut(s)	598, 631, 958, 1495
AleI	CACNNNNGTG	1 cut(s)	1560
AloI	GAACNNNNNNTCC	2 cut(s)	854, 886
AluBI	AGCT	8 cut(s)	198, 1085, 1135, 1204, 1308, 1650, 1712, 1882
AluI	AGCT	8 cut(s)	198, 1085, 1135, 1204, 1308, 1650, 1712, 1882
Alw26I	GTCTC	3 cut(s)	428, 810, 1490
AlwI	GGATC	2 cut(s)	1098, 1723
AlwNI	CAGNNNCTG	2 cut(s)	26, 671
AoxI	GGCC	5 cut(s)	76, 769, 853, 907, 961
ApeKI	GCWGC	6 cut(s)	99, 102, 1049, 1228, 1533, 1647
ApoI	RAATTY	5 cut(s)	163, 204, 539, 611, 735
ArsI	GACNNNNNNTTYG	2 cut(s)	1292, 1324
AspA2I	CCTAGG	1 cut(s)	1786
AspLEI	GCGC	2 cut(s)	64, 66
AspS9I	GGNCC	6 cut(s)	668, 790, 853, 984, 1157, 1253
AsuC2I	CCSGG	1 cut(s)	1839
AsuHPI	GGTGA	1 cut(s)	1811
AsuII	TTCGAA	2 cut(s)	739, 1323
AvaII	GGWCC	5 cut(s)	668, 790, 984, 1157, 1253
AvrII	CCTAGG	1 cut(s)	1786
AxyI	CCTNAGG	1 cut(s)	1587
BaeI	ACNNNNGTAYC	2 cut(s)	1860, 1893
BalI	TGGCCA	1 cut(s)	771
BanII	GRGCYC	1 cut(s)	318
BbsI	GAAGAC	2 cut(s)	1683, 1849
BbvCI	CCTCAGC	1 cut(s)	1434
BbvI	GCAGC	6 cut(s)	111, 114, 1036, 1215, 1520, 1659
BccI	CCATC	4 cut(s)	254, 308, 415, 1405
BciT130I	CCWGG	4 cut(s)	600, 633, 960, 1497
BciVI	GTATCC	1 cut(s)	1674
BclI	TGATCA	1 cut(s)	1111
BcnI	CCSGG	1 cut(s)	1839
BcoDI	GTCTC	3 cut(s)	428, 810, 1490
BfaI	CTAG	7 cut(s)	35, 396, 993, 1130, 1208, 1250, 1787
BfmI	CTRYAG	1 cut(s)	795
BfrI	CTTAAG	1 cut(s)	1466
BfuI	GTATCC	1 cut(s)	1674
BisI	GCNGC	6 cut(s)	100, 103, 1050, 1229, 1534, 1648
BlnI	CCTAGG	1 cut(s)	1786
BlsI	GCNGC	6 cut(s)	101, 104, 1051, 1230, 1535, 1649
BmcAI	AGTACT	1 cut(s)	1889
Bme1390I	CCNGG	5 cut(s)	600, 633, 960, 1497, 1839
Bme18I	GGWCC	5 cut(s)	668, 790, 984, 1157, 1253
BmgT120I	GGNCC	6 cut(s)	668, 790, 853, 984, 1157, 1253
BmiI	GGNNCC	4 cut(s)	393, 783, 792, 985
BmrFI	CCNGG	5 cut(s)	600, 633, 960, 1497, 1839
BmsI	GCATC	5 cut(s)	555, 1045, 1160, 1399, 1480
BpiI	GAAGAC	2 cut(s)	1683, 1849
BpmI	CTGGAG	1 cut(s)	924
Bpu10I	CCTNAGC	1 cut(s)	1434
Bpu14I	TTCGAA	2 cut(s)	739, 1323
BpuEI	CTTGAG	2 cut(s)	319, 1904
BpuMI	CCSGG	1 cut(s)	1839
Bsa29I	ATCGAT	2 cut(s)	303, 1809
BsaBI	GATNNNNATC	1 cut(s)	1452
BsaJI	CCNNGG	5 cut(s)	599, 658, 1496, 1786, 1851
Bsc4I	CCNNNNNNNGG	4 cut(s)	479, 677, 778, 1592
Bse1I	ACTGG	4 cut(s)	772, 792, 1482, 1602
Bse21I	CCTNAGG	1 cut(s)	1587
Bse3DI	GCAATG	1 cut(s)	1008
Bse8I	GATNNNNATC	1 cut(s)	1452
BseBI	CCWGG	4 cut(s)	600, 633, 960, 1497
BseCI	ATCGAT	2 cut(s)	303, 1809
BseDI	CCNNGG	5 cut(s)	599, 658, 1496, 1786, 1851
BseGI	GGATG	7 cut(s)	265, 407, 610, 1273, 1414, 1453, 1549
BseJI	GATNNNNATC	1 cut(s)	1452
BseLI	CCNNNNNNNGG	4 cut(s)	479, 677, 778, 1592
BseMI	GCAATG	1 cut(s)	1008
BseMII	CTCAG	6 cut(s)	431, 444, 821, 1247, 1320, 1448
BseNI	ACTGG	4 cut(s)	772, 792, 1482, 1602
BsePI	GCGCGC	1 cut(s)	62
BseRI	GAGGAG	2 cut(s)	104, 1878
BseXI	GCAGC	6 cut(s)	111, 114, 1036, 1215, 1520, 1659
BseYI	CCCAGC	1 cut(s)	198
BsgI	GTGCAG	3 cut(s)	907, 912, 1584
Bsh1236I	CGCG	2 cut(s)	64, 1579
BshFI	GGCC	5 cut(s)	78, 771, 855, 909, 963
BshVI	ATCGAT	2 cut(s)	303, 1809
BsiSI	CCGG	1 cut(s)	1838
BslFI	GGGAC	2 cut(s)	997, 1019
BslI	CCNNNNNNNGG	4 cut(s)	479, 677, 778, 1592
BsmAI	GTCTC	3 cut(s)	428, 810, 1490
BsmBI	CGTCTC	1 cut(s)	810
BsmFI	GGGAC	2 cut(s)	997, 1019
BsmI	GAATGC	2 cut(s)	898, 1918
BsnI	GGCC	5 cut(s)	78, 771, 855, 909, 963
Bsp119I	TTCGAA	2 cut(s)	739, 1323
Bsp1286I	GDGCHC	1 cut(s)	318
Bsp19I	CCATGG	1 cut(s)	658
BspACI	CCGC	3 cut(s)	105, 640, 1609
BspANI	GGCC	5 cut(s)	78, 771, 855, 909, 963
BspCNI	CTCAG	6 cut(s)	430, 443, 820, 1246, 1321, 1447
BspDI	ATCGAT	2 cut(s)	303, 1809
BspFNI	CGCG	2 cut(s)	64, 1579
BspHI	TCATGA	1 cut(s)	1093
BspLI	GGNNCC	4 cut(s)	393, 783, 792, 985
BspPI	GGATC	2 cut(s)	1098, 1723
BspT104I	TTCGAA	2 cut(s)	739, 1323
BspTI	CTTAAG	1 cut(s)	1466
BsrDI	GCAATG	1 cut(s)	1008
BsrI	ACTGG	4 cut(s)	772, 792, 1482, 1602
BssECI	CCNNGG	5 cut(s)	599, 658, 1496, 1786, 1851
BssHII	GCGCGC	1 cut(s)	62
BssT1I	CCWWGG	3 cut(s)	658, 1786, 1851
Bst2UI	CCWGG	4 cut(s)	600, 633, 960, 1497
Bst4CI	ACNGT	5 cut(s)	16, 238, 799, 1297, 1895
Bst6I	CTCTTC	2 cut(s)	1563, 1797
BstAFI	CTTAAG	1 cut(s)	1466
BstBI	TTCGAA	2 cut(s)	739, 1323
BstC8I	GCNNGC	8 cut(s)	64, 829, 1083, 1219, 1377, 1381, 1440, 1701
BstDEI	CTNAG	9 cut(s)	417, 430, 807, 1233, 1329, 1337, 1434, 1559, 1587
BstDSI	CCRYGG	1 cut(s)	658
BstENI	CCTNNNNNAGG	1 cut(s)	675
BstF5I	GGATG	7 cut(s)	265, 407, 610, 1273, 1414, 1453, 1549
BstFNI	CGCG	2 cut(s)	64, 1579
BstHHI	GCGC	2 cut(s)	64, 66
BstMAI	GTCTC	3 cut(s)	428, 810, 1490
BstMWI	GCNNNNNNNGC	6 cut(s)	322, 1055, 1237, 1246, 1647, 1709
BstNI	CCWGG	4 cut(s)	600, 633, 960, 1497
BstNSI	RCATGY	1 cut(s)	1379
BstSCI	CCNGG	5 cut(s)	598, 631, 958, 1495, 1837
BstSFI	CTRYAG	1 cut(s)	795
BstUI	CGCG	2 cut(s)	64, 1579
BstV1I	GCAGC	6 cut(s)	111, 114, 1036, 1215, 1520, 1659
BstV2I	GAAGAC	2 cut(s)	1683, 1849
Bsu15I	ATCGAT	2 cut(s)	303, 1809
Bsu36I	CCTNAGG	1 cut(s)	1587
BsuI	GTATCC	1 cut(s)	1674
BsuRI	GGCC	5 cut(s)	78, 771, 855, 909, 963
BsuTUI	ATCGAT	2 cut(s)	303, 1809
BtgI	CCRYGG	1 cut(s)	658
BtgZI	GCGATG	1 cut(s)	1132
BtsCI	GGATG	7 cut(s)	265, 407, 610, 1273, 1414, 1453, 1549
BtsI	GCAGTG	3 cut(s)	890, 895, 1000
BtsIMutI	CAGTG	6 cut(s)	21, 785, 890, 895, 1000, 1609
Cac8I	GCNNGC	8 cut(s)	64, 829, 1083, 1219, 1377, 1381, 1440, 1701
CaiI	CAGNNNCTG	2 cut(s)	26, 671
CciI	TCATGA	1 cut(s)	1093
CfoI	GCGC	2 cut(s)	64, 66
Cfr13I	GGNCC	6 cut(s)	668, 790, 853, 984, 1157, 1253
ClaI	ATCGAT	2 cut(s)	303, 1809
Csp6I	GTAC	6 cut(s)	242, 694, 1394, 1778, 1869, 1888
CspCI	CAANNNNNGTGG	2 cut(s)	976, 1011
CviQI	GTAC	6 cut(s)	242, 694, 1394, 1778, 1869, 1888
DdeI	CTNAG	9 cut(s)	417, 430, 807, 1233, 1329, 1337, 1434, 1559, 1587
DraIII	CACNNNGTG	1 cut(s)	250
EaeI	YGGCCR	1 cut(s)	769
Eam1104I	CTCTTC	2 cut(s)	1563, 1797
EarI	CTCTTC	2 cut(s)	1563, 1797
Eco130I	CCWWGG	3 cut(s)	658, 1786, 1851
Eco24I	GRGCYC	1 cut(s)	318
Eco47I	GGWCC	5 cut(s)	668, 790, 984, 1157, 1253
Eco81I	CCTNAGG	1 cut(s)	1587
EcoNI	CCTNNNNNAGG	1 cut(s)	675
EcoO109I	RGGNCCY	2 cut(s)	668, 1157
EcoRI	GAATTC	2 cut(s)	611, 735
EcoRII	CCWGG	4 cut(s)	598, 631, 958, 1495
EcoT14I	CCWWGG	3 cut(s)	658, 1786, 1851
EcoT22I	ATGCAT	1 cut(s)	1826
EcoT38I	GRGCYC	1 cut(s)	318
ErhI	CCWWGG	3 cut(s)	658, 1786, 1851
Esp3I	CGTCTC	1 cut(s)	810
FaqI	GGGAC	2 cut(s)	997, 1019
FauNDI	CATATG	1 cut(s)	1213
FbaI	TGATCA	1 cut(s)	1111
FblI	GTMKAC	2 cut(s)	1299, 1618
Fnu4HI	GCNGC	6 cut(s)	100, 103, 1050, 1229, 1534, 1648
FokI	GGATG	7 cut(s)	272, 394, 617, 1260, 1421, 1440, 1556
FriOI	GRGCYC	1 cut(s)	318
Fsp4HI	GCNGC	6 cut(s)	100, 103, 1050, 1229, 1534, 1648
FspBI	CTAG	7 cut(s)	35, 396, 993, 1130, 1208, 1250, 1787
GlaI	GCGC	2 cut(s)	63, 65
GluI	GCNGC	6 cut(s)	100, 103, 1050, 1229, 1534, 1648
GsaI	CCCAGC	1 cut(s)	202
GsuI	CTGGAG	1 cut(s)	924
HaeIII	GGCC	5 cut(s)	78, 771, 855, 909, 963
HapII	CCGG	1 cut(s)	1838
HhaI	GCGC	2 cut(s)	64, 66
Hin6I	GCGC	2 cut(s)	62, 64
HinP1I	GCGC	2 cut(s)	62, 64
HincII	GTYRAC	1 cut(s)	1300
HindII	GTYRAC	1 cut(s)	1300
HindIII	AAGCTT	1 cut(s)	1083
HinfI	GANTC	8 cut(s)	169, 355, 413, 443, 595, 1028, 1265, 1333
HpaII	CCGG	1 cut(s)	1838
HphI	GGTGA	1 cut(s)	1811
Hpy166II	GTNNAC	6 cut(s)	12, 244, 349, 998, 1300, 1619
Hpy8I	GTNNAC	6 cut(s)	12, 244, 349, 998, 1300, 1619
Hpy99I	CGWCG	3 cut(s)	122, 125, 519
HpyAV	CCTTC	9 cut(s)	68, 189, 483, 574, 578, 616, 974, 1768, 1853
HpyCH4III	ACNGT	5 cut(s)	16, 238, 799, 1297, 1895
HpyCH4IV	ACGT	1 cut(s)	913
HpyF10VI	GCNNNNNNNGC	6 cut(s)	322, 1055, 1237, 1246, 1647, 1709
HpyF3I	CTNAG	9 cut(s)	417, 430, 807, 1233, 1329, 1337, 1434, 1559, 1587
HpySE526I	ACGT	1 cut(s)	913
HspAI	GCGC	2 cut(s)	62, 64
Ksp22I	TGATCA	1 cut(s)	1111
LmnI	GCTCC	3 cut(s)	465, 1305, 1708
Lsp1109I	GCAGC	6 cut(s)	111, 114, 1036, 1215, 1520, 1659
LweI	GCATC	5 cut(s)	555, 1045, 1160, 1399, 1480
MaeI	CTAG	7 cut(s)	35, 396, 993, 1130, 1208, 1250, 1787
MaeII	ACGT	1 cut(s)	913
MaeIII	GTNAC	4 cut(s)	190, 499, 842, 1604
MboII	GAAGA	7 cut(s)	301, 468, 719, 1580, 1688, 1814, 1854
MfeI	CAATTG	1 cut(s)	459
MhlI	GDGCHC	1 cut(s)	318
MlsI	TGGCCA	1 cut(s)	771
MluNI	TGGCCA	1 cut(s)	771
MlyI	GAGTC	2 cut(s)	178, 437
Mox20I	TGGCCA	1 cut(s)	771
Mph1103I	ATGCAT	1 cut(s)	1826
MscI	TGGCCA	1 cut(s)	771
MseI	TTAA	6 cut(s)	627, 717, 1122, 1284, 1467, 1818
MslI	CAYNNNNRTG	1 cut(s)	1560
Msp20I	TGGCCA	1 cut(s)	771
MspA1I	CMGCKG	1 cut(s)	105
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	1 cut(s)	1838
MspR9I	CCNGG	5 cut(s)	600, 633, 960, 1497, 1839
MunI	CAATTG	1 cut(s)	459
Mva1269I	GAATGC	2 cut(s)	898, 1918
MvaI	CCWGG	4 cut(s)	600, 633, 960, 1497
MvnI	CGCG	2 cut(s)	64, 1579
MwoI	GCNNNNNNNGC	6 cut(s)	322, 1055, 1237, 1246, 1647, 1709
NciI	CCSGG	1 cut(s)	1839
NcoI	CCATGG	1 cut(s)	658
NdeI	CATATG	1 cut(s)	1213
NlaIV	GGNNCC	4 cut(s)	393, 783, 792, 985
NmuCI	GTSAC	2 cut(s)	842, 1604
NsiI	ATGCAT	1 cut(s)	1826
NspI	RCATGY	1 cut(s)	1379
NspV	TTCGAA	2 cut(s)	739, 1323
OliI	CACNNNNGTG	1 cut(s)	1560
PaeI	GCATGC	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	1093
PauI	GCGCGC	1 cut(s)	62
PcsI	WCGNNNNNNNCGW	1 cut(s)	1916
PctI	GAATGC	2 cut(s)	898, 1918
PfeI	GAWTC	6 cut(s)	355, 413, 595, 1028, 1265, 1333
PfoI	TCCNGGA	1 cut(s)	1837
PkrI	GCNGC	6 cut(s)	101, 104, 1051, 1230, 1535, 1649
PleI	GAGTC	2 cut(s)	177, 437
PpsI	GAGTC	2 cut(s)	177, 437
PpuMI	RGGWCCY	2 cut(s)	668, 1157
Psp5II	RGGWCCY	2 cut(s)	668, 1157
Psp6I	CCWGG	4 cut(s)	598, 631, 958, 1495
PspFI	CCCAGC	1 cut(s)	198
PspGI	CCWGG	4 cut(s)	598, 631, 958, 1495
PspN4I	GGNNCC	4 cut(s)	393, 783, 792, 985
PspPI	GGNCC	6 cut(s)	668, 790, 853, 984, 1157, 1253
PspPPI	RGGWCCY	2 cut(s)	668, 1157
PstNI	CAGNNNCTG	2 cut(s)	26, 671
PteI	GCGCGC	1 cut(s)	62
RsaI	GTAC	6 cut(s)	243, 695, 1395, 1779, 1870, 1889
RsaNI	GTAC	6 cut(s)	242, 694, 1394, 1778, 1869, 1888
RseI	CAYNNNNRTG	1 cut(s)	1560
SalI	GTCGAC	1 cut(s)	1298
SaqAI	TTAA	6 cut(s)	627, 717, 1122, 1284, 1467, 1818
SatI	GCNGC	6 cut(s)	100, 103, 1050, 1229, 1534, 1648
Sau96I	GGNCC	6 cut(s)	668, 790, 853, 984, 1157, 1253
ScaI	AGTACT	1 cut(s)	1889
SchI	GAGTC	2 cut(s)	178, 437
ScrFI	CCNGG	5 cut(s)	600, 633, 960, 1497, 1839
SduI	GDGCHC	1 cut(s)	318
SfaNI	GCATC	5 cut(s)	555, 1045, 1160, 1399, 1480
SfcI	CTRYAG	1 cut(s)	795
SfuI	TTCGAA	2 cut(s)	739, 1323
SinI	GGWCC	5 cut(s)	668, 790, 984, 1157, 1253
SmiMI	CAYNNNNRTG	1 cut(s)	1560
SmlI	CTYRAG	3 cut(s)	334, 1466, 1883
SmoI	CTYRAG	3 cut(s)	334, 1466, 1883
SphI	GCATGC	1 cut(s)	1379
SsiI	CCGC	3 cut(s)	105, 640, 1609
SspI	AATATT	2 cut(s)	954, 1320
SspMI	CTAG	7 cut(s)	35, 396, 993, 1130, 1208, 1250, 1787
StyD4I	CCNGG	5 cut(s)	598, 631, 958, 1495, 1837
StyI	CCWWGG	3 cut(s)	658, 1786, 1851
TaaI	ACNGT	5 cut(s)	16, 238, 799, 1297, 1895
TaiI	ACGT	1 cut(s)	916
TaqI	TCGA	9 cut(s)	117, 303, 739, 1299, 1323, 1506, 1809, 1878, 1919
TatI	WGTACW	1 cut(s)	1887
TfiI	GAWTC	6 cut(s)	355, 413, 595, 1028, 1265, 1333
Tru1I	TTAA	6 cut(s)	627, 717, 1122, 1284, 1467, 1818
Tru9I	TTAA	6 cut(s)	627, 717, 1122, 1284, 1467, 1818
TscAI	CASTG	6 cut(s)	21, 792, 890, 895, 1007, 1609
TseFI	GTSAC	2 cut(s)	842, 1604
TseI	GCWGC	6 cut(s)	99, 102, 1049, 1228, 1533, 1647
Tsp45I	GTSAC	2 cut(s)	842, 1604
TspDTI	ATGAA	9 cut(s)	242, 321, 604, 624, 753, 997, 1329, 1442, 1775
TspGWI	ACGGA	1 cut(s)	861
TspRI	CASTG	6 cut(s)	21, 792, 890, 895, 1007, 1609
Vha464I	CTTAAG	1 cut(s)	1466
VpaK11BI	GGWCC	5 cut(s)	668, 790, 984, 1157, 1253
XagI	CCTNNNNNAGG	1 cut(s)	675
XapI	RAATTY	5 cut(s)	163, 204, 539, 611, 735
XceI	RCATGY	1 cut(s)	1379
XmaJI	CCTAGG	1 cut(s)	1786
XmiI	GTMKAC	2 cut(s)	1299, 1618
XspI	CTAG	7 cut(s)	35, 396, 993, 1130, 1208, 1250, 1787
ZrmI	AGTACT	1 cut(s)	1889
Zsp2I	ATGCAT	1 cut(s)	1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.