Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001891

Physical Location & Seq

Genomic Coordinates Forward (+)

29331973 .. 29335809

Gene Structure 3837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g28910.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGGATATGAGTGAGAAGGAGAAATTTGAATTGGAGAATAGGAATGAGGATCCTATGAGTTATTCACCTTCTATGTCCTATGGGTTTGGTGGCTCCAATCTCACTAATGTATCCATGGGTTTGGTTCCTTCTGGGAATTCTCTGGGAGATAGTAAAGGGGATCTGATTGGTTCTTCTTCACAACCCTCTGCTTCAATGGTGGAGTCATTTAGCCAAGTGCTATGGGACCACCCAACCAGTTCGCAAAACTTGGGTTTTTGTGACATTAATGGTCAGACCAGTGCAAGCACTTCAAACACAATGGGGATTAGAAAAGGGATTCCTGCCTCTTTGAGAAGTGGGATTGATAGACCACTTGATATGTGTTGGAACCCTCCGAATTCGATGTTAAAAGGGGGGATTTTCTTACCGAATGGGCCGGCAGGGATGCTGCCGCAGAGCTTGTCTCAGTTTCCAGCTGATTCTGGGTTCATTGAGCGTGCTGCGAGGTTTTCGTGCTTCAATGGTGGTAATTTTAATGATATGATGAACCCTTTTGTTGTTCCTGAATCAATGAGTCTTTATTCGAAGGGTGGGGGAATGATGCAGTGGGCACAGGAGGTTGTAGCAGGTCAGGGGCCTAAAGCAATGTCCAGCAATGAGCTCAATCAAGTAGGTGATACTTCCAACGAGGTTTCTGTGCCTATTGATCATGGAGCAACTGATGGGAGCCCACTTAAGAATGAGAAGAAAAGTGAGAGTCTTGTGAAGTCTCATGATGAAGTAAAGAATGCAGTGGATGGGTCTGGTAACGAGTCTGATGAAGCCGATTTCAGTGGTGGTGCAGAAGAGCCGTCTATGATGGAGGGTGCAGGTGTAGGACCTTCTAAAAGCTCTAAGAAAAGGAAGAGGAATGGACAGGCTAATGAACTTGATCAAACCAAAACAGCCGCACAGCAACCTGGTGAATCAACAAAGGATGATACTGAAATGGTACATAAGGGAGCTTCAACTACCAACAAGATTTCCGGGAAACTTGTCAAACAAGGGTCTCAGACGTCTGATCCACCTAAAGAAGATTATATTCATGTTAGAGCTCGAAGAGGCCAAGCAACAAATAGCCATAGTCTTGCAGAAAGAGTCAGAAGGGAAAAGATCAGTGAGAGGATGAAGTTTCTTCAAGATCTTGTACCTGGATGCAGCAAGGTAACTGGGAAGGCAGTGATGCTTGACGAAATCATTAACTATGTACAGTCCTTGCAACGGCAGGTTGAGTTTTTGTCAATGAAGCTTGCAACAGTGAATCCACGATTGGATTTAAACATTGAAAGCCTACTAGAGAAAGATATGCTTCAGTCACGAGTTGGACCTTCATCTTCGATGGGATTTTCTCCGGATATGCATATTGCCTATCCTCCACTTCATCCATCTCAGTCAGGACTTATTCAAGCAGGCCTTCCTGGGATGGGGAGTACTTCTGATTTACTTCGAAGGGCAATGGGTTCACAAATGGCACCTATGACTGGAGGATTCAAGGACCCTTCCCAGGTACCAAATGTGTGGGAGGATGAGCTCCAGAATGTTTTCCAAATGACTTATGGAACCGGAACTCCCTCCAATAGCCAAGATGTGGATGGTTCTGGTACACCAGGCCATATGAAAGTTGAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

551

Amino Acids

59.02

Weight (kDa)

5.25

Isoelectric Point (pI)

49.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	366 - 414	1.7e-06	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	372 - 417	3.6e-06	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G68920 AT1G68920 AT1G68920 AT1G68920
fragaria_vesca	FvH4_4g28910 FvH4_4g28910 FvH4_4g28910
malus_domestica	MD13G1054700.v1.1 MD16G1053600.v1.1
prunus_persica	Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1
pyrus_communis	pycom13g04850 pycom16g04670
rosa_chinensis	RchiOBHm_Chr4g0437041
rosa_laevigata	RLG00000006476
rosa_multiflora	Rmu_sc0003436.1_g000014 Rmu_sc0008325.1_g000009
rosa_roxburghii	Rroxscaffold_5G00378110
rosa_rugosa	Rorug04G0297900 Rorug04G0297900 Rorug04G0297900
rosa_samantha	Rh4AG352300 Rh4BG361500 Rh4CG375800 Rh4DG355700
rosa_wichuraiana	Rw4G030840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	842
AatII	GACGTC	1 cut(s)	1040
Acc36I	ACCTGC	3 cut(s)	599, 842, 1237
Acc65I	GGTACC	1 cut(s)	1528
AccB1I	GGYRCC	2 cut(s)	1492, 1528
AccB7I	CCANNNNNTGG	1 cut(s)	1609
AccIII	TCCGGA	1 cut(s)	1372
AciI	CCGC	2 cut(s)	434, 930
AclWI	GGATC	4 cut(s)	44, 57, 168, 1037
AcsI	RAATTY	3 cut(s)	23, 136, 379
AcuI	CTGAAG	1 cut(s)	1316
AcyI	GRCGYC	1 cut(s)	1037
AfaI	GTAC	6 cut(s)	975, 1170, 1230, 1453, 1530, 1624
AfiI	CCNNNNNNNGG	5 cut(s)	1242, 1445, 1502, 1525, 1609
AflII	CTTAAG	1 cut(s)	716
AjnI	CCWGG	5 cut(s)	940, 1171, 1438, 1524, 1627
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 1274, 1306
AloI	GAACNNNNNNTCC	2 cut(s)	1573, 1605
AluBI	AGCT	8 cut(s)	441, 458, 643, 873, 986, 1076, 1270, 1552
AluI	AGCT	8 cut(s)	441, 458, 643, 873, 986, 1076, 1270, 1552
Alw21I	GWGCWC	3 cut(s)	645, 1078, 1554
Alw26I	GTCTC	3 cut(s)	450, 756, 1035
AlwI	GGATC	4 cut(s)	44, 57, 168, 1037
Aor13HI	TCCGGA	1 cut(s)	1372
AoxI	GGCC	5 cut(s)	416, 617, 1084, 1432, 1630
ApeKI	GCWGC	3 cut(s)	430, 482, 1179
ApoI	RAATTY	3 cut(s)	23, 136, 379
AseI	ATTAAT	1 cut(s)	267
Asp700I	GAANNNNTTC	1 cut(s)	1562
Asp718I	GGTACC	1 cut(s)	1528
AspS9I	GGNCC	6 cut(s)	226, 416, 617, 860, 1346, 1516
AsuC2I	CCSGG	1 cut(s)	1009
AsuHPI	GGTGA	3 cut(s)	57, 668, 956
AsuII	TTCGAA	2 cut(s)	566, 1468
AvaII	GGWCC	4 cut(s)	226, 860, 1346, 1516
BaeGI	GKGCMC	1 cut(s)	595
BaeI	ACNNNNGTAYC	2 cut(s)	93, 126
BamHI	GGATCC	1 cut(s)	49
BanI	GGYRCC	2 cut(s)	1492, 1528
BanII	GRGCYC	4 cut(s)	645, 713, 1078, 1554
BauI	CACGAG	1 cut(s)	1338
Bbv12I	GWGCWC	3 cut(s)	645, 1078, 1554
BbvI	GCAGC	3 cut(s)	417, 469, 1191
BccI	CCATC	7 cut(s)	698, 773, 835, 1354, 1414, 1438, 1607
BceAI	ACGGC	2 cut(s)	817, 1259
BciT130I	CCWGG	5 cut(s)	942, 1173, 1440, 1526, 1629
BciVI	GTATCC	1 cut(s)	121
BclI	TGATCA	2 cut(s)	688, 913
BcnI	CCSGG	1 cut(s)	1009
BcoDI	GTCTC	3 cut(s)	450, 756, 1035
BfaI	CTAG	1 cut(s)	1316
BfrI	CTTAAG	1 cut(s)	716
BfuAI	ACCTGC	3 cut(s)	599, 842, 1237
BfuI	GTATCC	1 cut(s)	121
BglII	AGATCT	1 cut(s)	1162
BisI	GCNGC	5 cut(s)	431, 434, 483, 930, 1180
BlsI	GCNGC	5 cut(s)	432, 435, 484, 931, 1181
BmcAI	AGTACT	1 cut(s)	1453
Bme1390I	CCNGG	6 cut(s)	942, 1009, 1173, 1440, 1526, 1629
Bme18I	GGWCC	4 cut(s)	226, 860, 1346, 1516
BmgT120I	GGNCC	6 cut(s)	226, 416, 617, 860, 1346, 1516
BmrFI	CCNGG	6 cut(s)	942, 1009, 1173, 1440, 1526, 1629
BmrI	ACTGGG	1 cut(s)	1200
BmsI	GCATC	4 cut(s)	417, 573, 1166, 1194
BmuI	ACTGGG	1 cut(s)	1200
BplI	GAGNNNNNCTC	2 cut(s)	430, 462
BpmI	CTGGAG	2 cut(s)	1524, 1538
Bpu14I	TTCGAA	2 cut(s)	566, 1468
BpuMI	CCSGG	1 cut(s)	1009
BsaHI	GRCGYC	1 cut(s)	1037
BsaI	GGTCTC	1 cut(s)	1035
BsaJI	CCNNGG	3 cut(s)	114, 1439, 1524
BsaWI	WCCGGW	2 cut(s)	1372, 1583
BsaXI	ACNNNNNCTCC	2 cut(s)	1573, 1603
Bsc4I	CCNNNNNNNGG	5 cut(s)	1242, 1445, 1502, 1525, 1609
Bse118I	RCCGGY	1 cut(s)	418
Bse1I	ACTGG	4 cut(s)	237, 279, 1195, 1507
Bse3DI	GCAATG	3 cut(s)	633, 643, 1482
BseAI	TCCGGA	1 cut(s)	1372
BseBI	CCWGG	5 cut(s)	942, 1173, 1440, 1526, 1629
BseDI	CCNNGG	3 cut(s)	114, 1439, 1524
BseGI	GGATG	9 cut(s)	432, 784, 964, 1152, 1181, 1402, 1449, 1552, 1618
BseLI	CCNNNNNNNGG	5 cut(s)	1242, 1445, 1502, 1525, 1609
BseMI	GCAATG	3 cut(s)	633, 643, 1482
BseMII	CTCAG	3 cut(s)	461, 1046, 1424
BseNI	ACTGG	4 cut(s)	237, 279, 1195, 1507
BseSI	GKGCMC	1 cut(s)	595
BseXI	GCAGC	3 cut(s)	417, 469, 1191
BsgI	GTGCAG	2 cut(s)	843, 870
BshFI	GGCC	5 cut(s)	418, 619, 1086, 1434, 1632
BshNI	GGYRCC	2 cut(s)	1492, 1528
BsiHKAI	GWGCWC	3 cut(s)	645, 1078, 1554
BsiSI	CCGG	4 cut(s)	419, 1008, 1373, 1584
BslFI	GGGAC	1 cut(s)	239
BslI	CCNNNNNNNGG	5 cut(s)	1242, 1445, 1502, 1525, 1609
BsmAI	GTCTC	3 cut(s)	450, 756, 1035
BsmFI	GGGAC	1 cut(s)	239
BsmI	GAATGC	1 cut(s)	775
BsnI	GGCC	5 cut(s)	418, 619, 1086, 1434, 1632
Bso31I	GGTCTC	1 cut(s)	1035
Bsp119I	TTCGAA	2 cut(s)	566, 1468
Bsp1286I	GDGCHC	5 cut(s)	595, 645, 713, 1078, 1554
Bsp13I	TCCGGA	1 cut(s)	1372
Bsp1407I	TGTACA	1 cut(s)	1228
Bsp143I	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
Bsp19I	CCATGG	1 cut(s)	114
BspACI	CCGC	2 cut(s)	434, 930
BspANI	GGCC	5 cut(s)	418, 619, 1086, 1434, 1632
BspCNI	CTCAG	3 cut(s)	460, 1045, 1423
BspEI	TCCGGA	1 cut(s)	1372
BspHI	TCATGA	1 cut(s)	754
BspMI	ACCTGC	3 cut(s)	599, 842, 1237
BspPI	GGATC	4 cut(s)	44, 57, 168, 1037
BspQI	GCTCTTC	1 cut(s)	822
BspT104I	TTCGAA	2 cut(s)	566, 1468
BspT107I	GGYRCC	2 cut(s)	1492, 1528
BspTI	CTTAAG	1 cut(s)	716
BspTNI	GGTCTC	1 cut(s)	1035
BsrDI	GCAATG	3 cut(s)	633, 643, 1482
BsrFI	RCCGGY	1 cut(s)	418
BsrGI	TGTACA	1 cut(s)	1228
BsrI	ACTGG	4 cut(s)	237, 279, 1195, 1507
BssAI	RCCGGY	1 cut(s)	418
BssECI	CCNNGG	3 cut(s)	114, 1439, 1524
BssMI	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
BssNI	GRCGYC	1 cut(s)	1037
BssSI	CACGAG	1 cut(s)	1338
BssT1I	CCWWGG	1 cut(s)	114
Bst2BI	CACGAG	1 cut(s)	1338
Bst2UI	CCWGG	5 cut(s)	942, 1173, 1440, 1526, 1629
Bst4CI	ACNGT	2 cut(s)	1233, 1279
Bst6I	CTCTTC	3 cut(s)	822, 881, 1075
BstACI	GRCGYC	1 cut(s)	1037
BstAFI	CTTAAG	1 cut(s)	716
BstAUI	TGTACA	1 cut(s)	1228
BstBI	TTCGAA	2 cut(s)	566, 1468
BstC8I	GCNNGC	5 cut(s)	286, 420, 480, 1272, 1432
BstDEI	CTNAG	4 cut(s)	447, 876, 1032, 1410
BstDSI	CCRYGG	1 cut(s)	114
BstF5I	GGATG	9 cut(s)	432, 784, 964, 1152, 1181, 1402, 1449, 1552, 1618
BstKTI	GATC	7 cut(s)	52, 163, 691, 916, 1045, 1137, 1165
BstMAI	GTCTC	3 cut(s)	450, 756, 1035
BstMBI	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
BstNI	CCWGG	5 cut(s)	942, 1173, 1440, 1526, 1629
BstSCI	CCNGG	6 cut(s)	940, 1007, 1171, 1438, 1524, 1627
BstSLI	GKGCMC	1 cut(s)	595
BstV1I	GCAGC	3 cut(s)	417, 469, 1191
BstX2I	RGATCY	3 cut(s)	49, 160, 1162
BstXI	CCANNNNNNTGG	2 cut(s)	121, 1539
BstYI	RGATCY	3 cut(s)	49, 160, 1162
BsuI	GTATCC	1 cut(s)	121
BsuRI	GGCC	5 cut(s)	418, 619, 1086, 1434, 1632
BtgI	CCRYGG	1 cut(s)	114
BtsCI	GGATG	9 cut(s)	432, 784, 964, 1152, 1181, 1402, 1449, 1552, 1618
BtsI	GCAGTG	3 cut(s)	593, 780, 1206
BtsIMutI	CAGTG	7 cut(s)	286, 593, 780, 820, 1144, 1206, 1284
BveI	ACCTGC	3 cut(s)	599, 842, 1237
Cac8I	GCNNGC	5 cut(s)	286, 420, 480, 1272, 1432
CciI	TCATGA	1 cut(s)	754
Cfr10I	RCCGGY	1 cut(s)	418
Cfr13I	GGNCC	6 cut(s)	226, 416, 617, 860, 1346, 1516
CsiI	ACCWGGT	1 cut(s)	940
Csp6I	GTAC	6 cut(s)	974, 1169, 1229, 1452, 1529, 1623
CviAII	CATG	4 cut(s)	115, 692, 755, 1067
CviQI	GTAC	6 cut(s)	974, 1169, 1229, 1452, 1529, 1623
DdeI	CTNAG	4 cut(s)	447, 876, 1032, 1410
DpnI	GATC	7 cut(s)	51, 162, 690, 915, 1044, 1136, 1164
DpnII	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
DraI	TTTAAA	1 cut(s)	1299
Eam1104I	CTCTTC	3 cut(s)	822, 881, 1075
EarI	CTCTTC	3 cut(s)	822, 881, 1075
Ecl136II	GAGCTC	3 cut(s)	643, 1076, 1552
Eco130I	CCWWGG	1 cut(s)	114
Eco147I	AGGCCT	1 cut(s)	1434
Eco24I	GRGCYC	4 cut(s)	645, 713, 1078, 1554
Eco31I	GGTCTC	1 cut(s)	1035
Eco47I	GGWCC	4 cut(s)	226, 860, 1346, 1516
Eco53kI	GAGCTC	3 cut(s)	643, 1076, 1552
Eco57I	CTGAAG	1 cut(s)	1316
EcoICRI	GAGCTC	3 cut(s)	643, 1076, 1552
EcoO109I	RGGNCCY	3 cut(s)	617, 860, 1516
EcoRI	GAATTC	2 cut(s)	136, 379
EcoRII	CCWGG	5 cut(s)	940, 1171, 1438, 1524, 1627
EcoT14I	CCWWGG	1 cut(s)	114
EcoT22I	ATGCAT	1 cut(s)	1383
EcoT38I	GRGCYC	4 cut(s)	645, 713, 1078, 1554
ErhI	CCWWGG	1 cut(s)	114
FaeI	CATG	4 cut(s)	118, 695, 758, 1070
FalI	AAGNNNNNCTT	5 cut(s)	1314, 1346, 1419, 1451, 1632
FaqI	GGGAC	1 cut(s)	239
FatI	CATG	4 cut(s)	114, 691, 754, 1066
FauNDI	CATATG	1 cut(s)	1635
FbaI	TGATCA	2 cut(s)	688, 913
Fnu4HI	GCNGC	5 cut(s)	431, 434, 483, 930, 1180
FokI	GGATG	9 cut(s)	439, 791, 971, 1159, 1188, 1389, 1456, 1559, 1625
FriOI	GRGCYC	4 cut(s)	645, 713, 1078, 1554
Fsp4HI	GCNGC	5 cut(s)	431, 434, 483, 930, 1180
FspBI	CTAG	1 cut(s)	1316
GluI	GCNGC	5 cut(s)	431, 434, 483, 930, 1180
GsuI	CTGGAG	2 cut(s)	1524, 1538
HaeIII	GGCC	5 cut(s)	418, 619, 1086, 1434, 1632
HapII	CCGG	4 cut(s)	419, 1008, 1373, 1584
Hin1I	GRCGYC	1 cut(s)	1037
Hin1II	CATG	4 cut(s)	118, 695, 758, 1070
HindIII	AAGCTT	1 cut(s)	1268
HpaII	CCGG	4 cut(s)	419, 1008, 1373, 1584
HphI	GGTGA	3 cut(s)	57, 668, 956
Hpy166II	GTNNAC	2 cut(s)	1484, 1625
Hpy188I	TCNGA	8 cut(s)	165, 276, 378, 799, 1035, 1042, 1124, 1459
Hpy188III	TCNNGA	7 cut(s)	545, 755, 1160, 1338, 1373, 1416, 1555
Hpy8I	GTNNAC	2 cut(s)	1484, 1625
HpyCH4III	ACNGT	2 cut(s)	1233, 1279
HpyCH4IV	ACGT	1 cut(s)	1037
HpyF3I	CTNAG	4 cut(s)	447, 876, 1032, 1410
HpySE526I	ACGT	1 cut(s)	1037
Hsp92I	GRCGYC	1 cut(s)	1037
Hsp92II	CATG	4 cut(s)	118, 695, 758, 1070
Kpn2I	TCCGGA	1 cut(s)	1372
KpnI	GGTACC	1 cut(s)	1532
KroI	GCCGGC	1 cut(s)	418
KroNI	GCCGGC	1 cut(s)	420
Ksp22I	TGATCA	2 cut(s)	688, 913
Kzo9I	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
LguI	GCTCTTC	1 cut(s)	822
LmnI	GCTCC	5 cut(s)	98, 695, 708, 983, 1557
Lsp1109I	GCAGC	3 cut(s)	417, 469, 1191
LweI	GCATC	4 cut(s)	417, 573, 1166, 1194
MabI	ACCWGGT	1 cut(s)	940
MaeI	CTAG	1 cut(s)	1316
MaeII	ACGT	1 cut(s)	1037
MaeIII	GTNAC	4 cut(s)	260, 788, 1186, 1335
MalI	GATC	7 cut(s)	51, 162, 690, 915, 1044, 1136, 1164
MboI	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
MboII	GAAGA	9 cut(s)	165, 168, 739, 839, 898, 1067, 1092, 1148, 1347
MflI	RGATCY	3 cut(s)	49, 160, 1162
MhlI	GDGCHC	5 cut(s)	595, 645, 713, 1078, 1554
MluCI	AATT	5 cut(s)	23, 29, 136, 379, 511
MlyI	GAGTC	5 cut(s)	212, 565, 748, 803, 1128
MmeI	TCCRAC	3 cut(s)	347, 690, 1324
Mph1103I	ATGCAT	1 cut(s)	1383
MroI	TCCGGA	1 cut(s)	1372
MroNI	GCCGGC	1 cut(s)	418
MroXI	GAANNNNTTC	1 cut(s)	1562
MseI	TTAA	6 cut(s)	267, 389, 516, 717, 1221, 1298
MspA1I	CMGCKG	1 cut(s)	458
MspCI	CTTAAG	1 cut(s)	716
MspI	CCGG	4 cut(s)	419, 1008, 1373, 1584
MspR9I	CCNGG	6 cut(s)	942, 1009, 1173, 1440, 1526, 1629
Mva1269I	GAATGC	1 cut(s)	775
MvaI	CCWGG	5 cut(s)	942, 1173, 1440, 1526, 1629
NaeI	GCCGGC	1 cut(s)	420
NciI	CCSGG	1 cut(s)	1009
NcoI	CCATGG	1 cut(s)	114
NdeI	CATATG	1 cut(s)	1635
NdeII	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
NgoMIV	GCCGGC	1 cut(s)	418
NlaIII	CATG	4 cut(s)	118, 695, 758, 1070
NmuCI	GTSAC	2 cut(s)	260, 1335
NsiI	ATGCAT	1 cut(s)	1383
NspV	TTCGAA	2 cut(s)	566, 1468
PagI	TCATGA	1 cut(s)	754
PaqCI	CACCTGC	1 cut(s)	842
PceI	AGGCCT	1 cut(s)	1434
PciSI	GCTCTTC	1 cut(s)	822
PctI	GAATGC	1 cut(s)	775
PdiI	GCCGGC	1 cut(s)	420
PdmI	GAANNNNTTC	1 cut(s)	1562
PfeI	GAWTC	6 cut(s)	319, 461, 548, 947, 1282, 1509
PflMI	CCANNNNNTGG	1 cut(s)	1609
PfoI	TCCNGGA	1 cut(s)	1007
PkrI	GCNGC	5 cut(s)	432, 435, 484, 931, 1181
PleI	GAGTC	5 cut(s)	211, 564, 747, 802, 1127
PpsI	GAGTC	5 cut(s)	211, 564, 747, 802, 1127
PpuMI	RGGWCCY	2 cut(s)	860, 1516
PshBI	ATTAAT	1 cut(s)	267
Psp124BI	GAGCTC	3 cut(s)	645, 1078, 1554
Psp5II	RGGWCCY	2 cut(s)	860, 1516
Psp6I	CCWGG	5 cut(s)	940, 1171, 1438, 1524, 1627
PspGI	CCWGG	5 cut(s)	940, 1171, 1438, 1524, 1627
PspPI	GGNCC	6 cut(s)	226, 416, 617, 860, 1346, 1516
PspPPI	RGGWCCY	2 cut(s)	860, 1516
PsuI	RGATCY	3 cut(s)	49, 160, 1162
PvuII	CAGCTG	1 cut(s)	458
RsaI	GTAC	6 cut(s)	975, 1170, 1230, 1453, 1530, 1624
RsaNI	GTAC	6 cut(s)	974, 1169, 1229, 1452, 1529, 1623
SacI	GAGCTC	3 cut(s)	645, 1078, 1554
SapI	GCTCTTC	1 cut(s)	822
SaqAI	TTAA	6 cut(s)	267, 389, 516, 717, 1221, 1298
SatI	GCNGC	5 cut(s)	431, 434, 483, 930, 1180
Sau3AI	GATC	7 cut(s)	49, 160, 688, 913, 1042, 1134, 1162
Sau96I	GGNCC	6 cut(s)	226, 416, 617, 860, 1346, 1516
ScaI	AGTACT	1 cut(s)	1453
SchI	GAGTC	5 cut(s)	212, 565, 748, 803, 1128
ScrFI	CCNGG	6 cut(s)	942, 1009, 1173, 1440, 1526, 1629
SduI	GDGCHC	5 cut(s)	595, 645, 713, 1078, 1554
SexAI	ACCWGGT	1 cut(s)	940
SfaNI	GCATC	4 cut(s)	417, 573, 1166, 1194
SfuI	TTCGAA	2 cut(s)	566, 1468
SinI	GGWCC	4 cut(s)	226, 860, 1346, 1516
SmlI	CTYRAG	1 cut(s)	716
SmoI	CTYRAG	1 cut(s)	716
Sse9I	AATT	5 cut(s)	23, 29, 136, 379, 511
SseBI	AGGCCT	1 cut(s)	1434
SsiI	CCGC	2 cut(s)	434, 930
SspMI	CTAG	1 cut(s)	1316
SstI	GAGCTC	3 cut(s)	645, 1078, 1554
StuI	AGGCCT	1 cut(s)	1434
StyD4I	CCNGG	6 cut(s)	940, 1007, 1171, 1438, 1524, 1627
StyI	CCWWGG	1 cut(s)	114
TaaI	ACNGT	2 cut(s)	1233, 1279
TaiI	ACGT	1 cut(s)	1040
TaqI	TCGA	5 cut(s)	383, 566, 1078, 1358, 1468
TasI	AATT	5 cut(s)	23, 29, 136, 379, 511
TatI	WGTACW	2 cut(s)	1228, 1451
TauI	GCSGC	2 cut(s)	436, 932
TfiI	GAWTC	6 cut(s)	319, 461, 548, 947, 1282, 1509
Tru1I	TTAA	6 cut(s)	267, 389, 516, 717, 1221, 1298
Tru9I	TTAA	6 cut(s)	267, 389, 516, 717, 1221, 1298
TscAI	CASTG	7 cut(s)	286, 593, 780, 820, 1144, 1206, 1284
TseFI	GTSAC	2 cut(s)	260, 1335
TseI	GCWGC	3 cut(s)	430, 482, 1179
Tsp45I	GTSAC	2 cut(s)	260, 1335
TspRI	CASTG	7 cut(s)	286, 593, 780, 820, 1144, 1206, 1284
Van91I	CCANNNNNTGG	1 cut(s)	1609
Vha464I	CTTAAG	1 cut(s)	716
VpaK11BI	GGWCC	4 cut(s)	226, 860, 1346, 1516
VspI	ATTAAT	1 cut(s)	267
XapI	RAATTY	3 cut(s)	23, 136, 379
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1574, 1610
XmnI	GAANNNNTTC	1 cut(s)	1562
XspI	CTAG	1 cut(s)	1316
ZraI	GACGTC	1 cut(s)	1038
ZrmI	AGTACT	1 cut(s)	1453
Zsp2I	ATGCAT	1 cut(s)	1383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.