Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003436.1

Orthogroup ID

OG0001891

Physical Location & Seq

Genomic Coordinates Forward (+)

41916 .. 44513

Gene Structure 2598 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003436.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

atggatatgagtgagaaagataaatttgaattggagaataggaatgaggagcctatgaattattcaccttctatgacctatgggtttggtggctccaatctcacaaatgcatctatgggtttggttcctactgggaattctatggcagatagtaaagaggatctgattggttcttcttcacaaccctctgcttcaatggtggagtcatttagccaagcgctttgggaccacccaaccaatgcacaaaacatgggtttttgtgacattaatggtcagaccagtgcaagcacttcaaacacaatgggaattagaaaagggattcctgcctctttgagaagtgggattgatagaccacttgatatgtgttggaacccaccaaattcgatgttgaaaggggggattttcttaccaaatgggccggcagggatgctaccgcagagcttgtctcagtttccagctgattctgggttcattgagcgtgctgctaggttctcgtgcttcaatggtgggaattttagtgatatgatgaacccttttgttgttcctgaatcaatgagtctttattctaagggtgggggaatgatgcaatgggctgtggcaggccaggggcctaaagcaatgtccagcaatgagctcaatcaagtaggtgatgcttcgaacgaggtttctttgcctattgatcatggggcaactgatgggagcccacttaagaatgagaagaaaagtgagagtctcgtgaagtctcatgatgaagcaaaaaatgcaatggatgggtctggtaacgagtctgatgaagctgatttcagtggtggtgcggaggagccgtccatgatggagggtacaggggtaggaccttcttctaagggctctaagaaaaggaaaaggggtggacaggctaatgaacttgatcaaaccaaaatagctgcacatcaatccattgaatcaacaaaggatgatactgaaatggtacagaagggagcttcaactaccaacaagactactggaagacttgtcaaacaagggtctcagacgtctgatccaccaaaagaagaatatattcatgttagggctcgaagaggccaagcaacaaatagccatagtcttgcagaaagagtcagaagggagaagatcagtgagaggatgaagtttcttcaagatcttgtacctggatgtagcaaggtaactgggaaggcagtgatgctggacgaaatcattaactatgtacagtcattgcaacggcaggttgagtttttgtcaatgaaacttgcgacagtgaatccacgattggatttaaacattgaaagcctcctggaaaaagatcagatccttcagtcacgagttggaccttcatcttcgatgggattttctccggatatgcatattgcctatcctccacttcatccatctcagtcgggacttattcaagcaggccttcctgggatggggagctcttctgatttgcttcgaagggccatgggttcccaaatggcacctatgactggaggattcaaggagccttcccagctatcaaatgtgtgggaggatgagctccagaatgttttccaaatgagctatagaactggaactccctccaatagccaagatgtcgatggatctgggacaccaggccatatgaaagctctaccagttaaatttgacgcctctggcttggagaattctgagaaatgtaatgcagaagcagatgacatgctgaacaatgcttcctatgcggagaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

579

Amino Acids

62.3

Weight (kDa)

5.18

Isoelectric Point (pI)

50.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G68920 AT1G68920 AT1G68920 AT1G68920
fragaria_vesca	FvH4_4g28910 FvH4_4g28910 FvH4_4g28910
malus_domestica	MD13G1054700.v1.1 MD16G1053600.v1.1
prunus_persica	Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1
pyrus_communis	pycom13g04850 pycom16g04670
rosa_chinensis	RchiOBHm_Chr4g0437041
rosa_laevigata	RLG00000006476
rosa_multiflora	Rmu_sc0003436.1_g000014 Rmu_sc0008325.1_g000009
rosa_roxburghii	Rroxscaffold_5G00378110
rosa_rugosa	Rorug04G0297900 Rorug04G0297900 Rorug04G0297900
rosa_samantha	Rh4AG352300 Rh4BG361500 Rh4CG375800 Rh4DG355700
rosa_wichuraiana	Rw4G030840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1034
Acc36I	ACCTGC	1 cut(s)	1231
AccB1I	GGYRCC	1 cut(s)	1489
AccIII	TCCGGA	1 cut(s)	1369
AciI	CCGC	3 cut(s)	434, 815, 1730
AclWI	GGATC	4 cut(s)	168, 1031, 1318, 1621
AcsI	RAATTY	6 cut(s)	23, 136, 379, 511, 1652, 1675
AcuI	CTGAAG	1 cut(s)	1313
AcyI	GRCGYC	2 cut(s)	1031, 1659
AfaI	GTAC	4 cut(s)	841, 969, 1164, 1224
AfeI	AGCGCT	1 cut(s)	219
AfiI	CCNNNNNNNGG	2 cut(s)	1442, 1499
AflII	CTTAAG	1 cut(s)	707
AjnI	CCWGG	5 cut(s)	603, 1165, 1308, 1435, 1624
AjuI	GAANNNNNNNTTGG	2 cut(s)	1268, 1300
AloI	GAACNNNNNNTCC	4 cut(s)	1570, 1602, 1706, 1738
Alw21I	GWGCWC	3 cut(s)	636, 1451, 1551
Alw26I	GTCTC	4 cut(s)	450, 737, 747, 1029
AlwI	GGATC	4 cut(s)	168, 1031, 1318, 1621
Aor13HI	TCCGGA	1 cut(s)	1369
Aor51HI	AGCGCT	1 cut(s)	219
AoxI	GGCC	7 cut(s)	416, 601, 608, 1078, 1429, 1470, 1627
ApeKI	GCWGC	2 cut(s)	482, 923
ApoI	RAATTY	6 cut(s)	23, 136, 379, 511, 1652, 1675
AseI	ATTAAT	1 cut(s)	267
Asp700I	GAANNNNTTC	2 cut(s)	1056, 1559
AspLEI	GCGC	1 cut(s)	220
AspS9I	GGNCC	6 cut(s)	226, 416, 608, 851, 1343, 1470
AsuHPI	GGTGA	2 cut(s)	57, 659
AsuII	TTCGAA	2 cut(s)	656, 1465
AvaII	GGWCC	3 cut(s)	226, 851, 1343
BaeI	ACNNNNGTAYC	2 cut(s)	831, 864
BanI	GGYRCC	1 cut(s)	1489
BanII	GRGCYC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
BauI	CACGAG	3 cut(s)	493, 734, 1335
BbsI	GAAGAC	1 cut(s)	1012
Bbv12I	GWGCWC	3 cut(s)	636, 1451, 1551
BbvI	GCAGC	2 cut(s)	469, 910
BccI	CCATC	7 cut(s)	689, 764, 826, 1351, 1411, 1435, 1604
BceAI	ACGGC	2 cut(s)	808, 1253
BciT130I	CCWGG	5 cut(s)	605, 1167, 1310, 1437, 1626
BclI	TGATCA	2 cut(s)	679, 907
BcoDI	GTCTC	4 cut(s)	450, 737, 747, 1029
BfaI	CTAG	1 cut(s)	486
BfmI	CTRYAG	1 cut(s)	1573
BfoI	RGCGCY	1 cut(s)	221
BfrI	CTTAAG	1 cut(s)	707
BfuAI	ACCTGC	1 cut(s)	1231
BglII	AGATCT	1 cut(s)	1156
BisI	GCNGC	2 cut(s)	483, 924
BlsI	GCNGC	2 cut(s)	484, 925
Bme1390I	CCNGG	5 cut(s)	605, 1167, 1310, 1437, 1626
Bme18I	GGWCC	3 cut(s)	226, 851, 1343
BmgT120I	GGNCC	6 cut(s)	226, 416, 608, 851, 1343, 1470
BmrFI	CCNGG	5 cut(s)	605, 1167, 1310, 1437, 1626
BmrI	ACTGGG	2 cut(s)	141, 1194
BmsI	GCATC	5 cut(s)	119, 417, 573, 640, 1188
BmuI	ACTGGG	2 cut(s)	141, 1194
BpiI	GAAGAC	1 cut(s)	1012
BplI	GAGNNNNNCTC	2 cut(s)	430, 462
BpmI	CTGGAG	2 cut(s)	1521, 1535
Bpu14I	TTCGAA	2 cut(s)	656, 1465
BsaHI	GRCGYC	2 cut(s)	1031, 1659
BsaI	GGTCTC	1 cut(s)	1029
BsaJI	CCNNGG	3 cut(s)	604, 1436, 1473
BsaWI	WCCGGW	1 cut(s)	1369
BsaXI	ACNNNNNCTCC	4 cut(s)	809, 839, 1570, 1600
Bsc4I	CCNNNNNNNGG	2 cut(s)	1442, 1499
Bse118I	RCCGGY	1 cut(s)	418
Bse1I	ACTGG	7 cut(s)	136, 279, 1006, 1189, 1504, 1585, 1646
Bse3DI	GCAATG	5 cut(s)	593, 624, 634, 771, 1229
BseAI	TCCGGA	1 cut(s)	1369
BseBI	CCWGG	5 cut(s)	605, 1167, 1310, 1437, 1626
BseDI	CCNNGG	3 cut(s)	604, 1436, 1473
BseGI	GGATG	8 cut(s)	432, 775, 958, 1146, 1175, 1399, 1446, 1549
BseLI	CCNNNNNNNGG	2 cut(s)	1442, 1499
BseMI	GCAATG	5 cut(s)	593, 624, 634, 771, 1229
BseMII	CTCAG	4 cut(s)	461, 1040, 1421, 1671
BseNI	ACTGG	7 cut(s)	136, 279, 1006, 1189, 1504, 1585, 1646
BseRI	GAGGAG	2 cut(s)	62, 833
BseXI	GCAGC	2 cut(s)	469, 910
BseYI	CCCAGC	1 cut(s)	1521
BsgI	GTGCAG	1 cut(s)	909
BshFI	GGCC	7 cut(s)	418, 603, 610, 1080, 1431, 1472, 1629
BshNI	GGYRCC	1 cut(s)	1489
BsiHKAI	GWGCWC	3 cut(s)	636, 1451, 1551
BsiSI	CCGG	2 cut(s)	419, 1370
BslFI	GGGAC	3 cut(s)	239, 1428, 1633
BslI	CCNNNNNNNGG	2 cut(s)	1442, 1499
BsmAI	GTCTC	4 cut(s)	450, 737, 747, 1029
BsmFI	GGGAC	3 cut(s)	239, 1428, 1633
BsnI	GGCC	7 cut(s)	418, 603, 610, 1080, 1431, 1472, 1629
Bso31I	GGTCTC	1 cut(s)	1029
Bsp119I	TTCGAA	2 cut(s)	656, 1465
Bsp1286I	GDGCHC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
Bsp13I	TCCGGA	1 cut(s)	1369
Bsp1407I	TGTACA	1 cut(s)	1222
Bsp143I	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
Bsp19I	CCATGG	1 cut(s)	1473
BspACI	CCGC	3 cut(s)	434, 815, 1730
BspANI	GGCC	7 cut(s)	418, 603, 610, 1080, 1431, 1472, 1629
BspCNI	CTCAG	4 cut(s)	460, 1039, 1420, 1672
BspEI	TCCGGA	1 cut(s)	1369
BspHI	TCATGA	1 cut(s)	745
BspMI	ACCTGC	1 cut(s)	1231
BspPI	GGATC	4 cut(s)	168, 1031, 1318, 1621
BspQI	GCTCTTC	1 cut(s)	1456
BspT104I	TTCGAA	2 cut(s)	656, 1465
BspT107I	GGYRCC	1 cut(s)	1489
BspTI	CTTAAG	1 cut(s)	707
BspTNI	GGTCTC	1 cut(s)	1029
BsrDI	GCAATG	5 cut(s)	593, 624, 634, 771, 1229
BsrFI	RCCGGY	1 cut(s)	418
BsrGI	TGTACA	1 cut(s)	1222
BsrI	ACTGG	7 cut(s)	136, 279, 1006, 1189, 1504, 1585, 1646
BssAI	RCCGGY	1 cut(s)	418
BssECI	CCNNGG	3 cut(s)	604, 1436, 1473
BssMI	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
BssNI	GRCGYC	2 cut(s)	1031, 1659
BssSI	CACGAG	3 cut(s)	493, 734, 1335
BssT1I	CCWWGG	1 cut(s)	1473
Bst2BI	CACGAG	3 cut(s)	493, 734, 1335
Bst2UI	CCWGG	5 cut(s)	605, 1167, 1310, 1437, 1626
Bst4CI	ACNGT	2 cut(s)	1227, 1273
Bst6I	CTCTTC	2 cut(s)	1069, 1456
BstACI	GRCGYC	2 cut(s)	1031, 1659
BstAFI	CTTAAG	1 cut(s)	707
BstAPI	GCANNNNNTGC	1 cut(s)	761
BstAUI	TGTACA	1 cut(s)	1222
BstBI	TTCGAA	2 cut(s)	656, 1465
BstC8I	GCNNGC	5 cut(s)	286, 420, 480, 601, 1429
BstDEI	CTNAG	7 cut(s)	447, 567, 861, 870, 1026, 1407, 1680
BstDSI	CCRYGG	1 cut(s)	1473
BstF5I	GGATG	8 cut(s)	432, 775, 958, 1146, 1175, 1399, 1446, 1549
BstH2I	RGCGCY	1 cut(s)	221
BstHHI	GCGC	1 cut(s)	220
BstKTI	GATC	9 cut(s)	163, 682, 910, 1039, 1131, 1159, 1321, 1326, 1616
BstMAI	GTCTC	4 cut(s)	450, 737, 747, 1029
BstMBI	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
BstMWI	GCNNNNNNNGC	3 cut(s)	761, 1522, 1727
BstNI	CCWGG	5 cut(s)	605, 1167, 1310, 1437, 1626
BstNSI	RCATGY	1 cut(s)	1711
BstSCI	CCNGG	5 cut(s)	603, 1165, 1308, 1435, 1624
BstSFI	CTRYAG	1 cut(s)	1573
BstV1I	GCAGC	2 cut(s)	469, 910
BstV2I	GAAGAC	1 cut(s)	1012
BstX2I	RGATCY	4 cut(s)	160, 1156, 1323, 1613
BstYI	RGATCY	4 cut(s)	160, 1156, 1323, 1613
BsuRI	GGCC	7 cut(s)	418, 603, 610, 1080, 1431, 1472, 1629
BtgI	CCRYGG	1 cut(s)	1473
BtsCI	GGATG	8 cut(s)	432, 775, 958, 1146, 1175, 1399, 1446, 1549
BtsI	GCAGTG	1 cut(s)	1200
BtsIMutI	CAGTG	5 cut(s)	286, 811, 1138, 1200, 1278
BveI	ACCTGC	1 cut(s)	1231
Cac8I	GCNNGC	5 cut(s)	286, 420, 480, 601, 1429
CciI	TCATGA	1 cut(s)	745
CfoI	GCGC	1 cut(s)	220
Cfr10I	RCCGGY	1 cut(s)	418
Cfr13I	GGNCC	6 cut(s)	226, 416, 608, 851, 1343, 1470
CseI	GACGC	1 cut(s)	1667
Csp6I	GTAC	4 cut(s)	840, 968, 1163, 1223
CviAII	CATG	7 cut(s)	250, 683, 746, 829, 1061, 1474, 1708
CviQI	GTAC	4 cut(s)	840, 968, 1163, 1223
DdeI	CTNAG	7 cut(s)	447, 567, 861, 870, 1026, 1407, 1680
DpnI	GATC	9 cut(s)	162, 681, 909, 1038, 1130, 1158, 1320, 1325, 1615
DpnII	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
DraI	TTTAAA	1 cut(s)	1293
Eam1104I	CTCTTC	2 cut(s)	1069, 1456
EarI	CTCTTC	2 cut(s)	1069, 1456
Ecl136II	GAGCTC	3 cut(s)	634, 1449, 1549
Eco130I	CCWWGG	1 cut(s)	1473
Eco147I	AGGCCT	1 cut(s)	1431
Eco24I	GRGCYC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
Eco31I	GGTCTC	1 cut(s)	1029
Eco47I	GGWCC	3 cut(s)	226, 851, 1343
Eco47III	AGCGCT	1 cut(s)	219
Eco53kI	GAGCTC	3 cut(s)	634, 1449, 1549
Eco57I	CTGAAG	1 cut(s)	1313
EcoICRI	GAGCTC	3 cut(s)	634, 1449, 1549
EcoO109I	RGGNCCY	2 cut(s)	608, 851
EcoRI	GAATTC	2 cut(s)	136, 1675
EcoRII	CCWGG	5 cut(s)	603, 1165, 1308, 1435, 1624
EcoT14I	CCWWGG	1 cut(s)	1473
EcoT22I	ATGCAT	2 cut(s)	112, 1380
EcoT38I	GRGCYC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
ErhI	CCWWGG	1 cut(s)	1473
FaeI	CATG	7 cut(s)	253, 686, 749, 832, 1064, 1477, 1711
FalI	AAGNNNNNCTT	2 cut(s)	1416, 1448
FaqI	GGGAC	3 cut(s)	239, 1428, 1633
FatI	CATG	7 cut(s)	249, 682, 745, 828, 1060, 1473, 1707
FauNDI	CATATG	1 cut(s)	1632
FbaI	TGATCA	2 cut(s)	679, 907
Fnu4HI	GCNGC	2 cut(s)	483, 924
FokI	GGATG	8 cut(s)	439, 782, 965, 1153, 1182, 1386, 1453, 1556
FriOI	GRGCYC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
Fsp4HI	GCNGC	2 cut(s)	483, 924
FspBI	CTAG	1 cut(s)	486
GlaI	GCGC	1 cut(s)	219
GluI	GCNGC	2 cut(s)	483, 924
GsaI	CCCAGC	1 cut(s)	1525
GsuI	CTGGAG	2 cut(s)	1521, 1535
HaeII	RGCGCY	1 cut(s)	221
HaeIII	GGCC	7 cut(s)	418, 603, 610, 1080, 1431, 1472, 1629
HapII	CCGG	2 cut(s)	419, 1370
HgaI	GACGC	1 cut(s)	1667
HhaI	GCGC	1 cut(s)	220
Hin1I	GRCGYC	2 cut(s)	1031, 1659
Hin1II	CATG	7 cut(s)	253, 686, 749, 832, 1064, 1477, 1711
Hin6I	GCGC	1 cut(s)	218
HinP1I	GCGC	1 cut(s)	218
HpaII	CCGG	2 cut(s)	419, 1370
HphI	GGTGA	2 cut(s)	57, 659
Hpy166II	GTNNAC	1 cut(s)	890
Hpy188I	TCNGA	9 cut(s)	165, 276, 790, 1029, 1036, 1118, 1323, 1456, 1681
Hpy188III	TCNNGA	8 cut(s)	545, 736, 746, 1154, 1335, 1370, 1413, 1552
Hpy8I	GTNNAC	1 cut(s)	890
HpyCH4III	ACNGT	2 cut(s)	1227, 1273
HpyCH4IV	ACGT	1 cut(s)	1031
HpyF10VI	GCNNNNNNNGC	3 cut(s)	761, 1522, 1727
HpyF3I	CTNAG	7 cut(s)	447, 567, 861, 870, 1026, 1407, 1680
HpySE526I	ACGT	1 cut(s)	1031
Hsp92I	GRCGYC	2 cut(s)	1031, 1659
Hsp92II	CATG	7 cut(s)	253, 686, 749, 832, 1064, 1477, 1711
HspAI	GCGC	1 cut(s)	218
Kpn2I	TCCGGA	1 cut(s)	1369
KroI	GCCGGC	1 cut(s)	418
KroNI	GCCGGC	1 cut(s)	420
Ksp22I	TGATCA	2 cut(s)	679, 907
Kzo9I	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
LguI	GCTCTTC	1 cut(s)	1456
LmnI	GCTCC	8 cut(s)	49, 98, 699, 820, 977, 1446, 1513, 1554
Lsp1109I	GCAGC	2 cut(s)	469, 910
LweI	GCATC	5 cut(s)	119, 417, 573, 640, 1188
MaeI	CTAG	1 cut(s)	486
MaeII	ACGT	1 cut(s)	1031
MaeIII	GTNAC	4 cut(s)	260, 779, 1180, 1332
MalI	GATC	9 cut(s)	162, 681, 909, 1038, 1130, 1158, 1320, 1325, 1615
MboI	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
MflI	RGATCY	4 cut(s)	160, 1156, 1323, 1613
MhlI	GDGCHC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
MluCI	AATT	9 cut(s)	23, 29, 58, 136, 306, 379, 511, 1652, 1675
MlyI	GAGTC	5 cut(s)	212, 565, 739, 794, 1122
MmeI	TCCRAC	2 cut(s)	347, 1321
Mph1103I	ATGCAT	2 cut(s)	112, 1380
MroI	TCCGGA	1 cut(s)	1369
MroNI	GCCGGC	1 cut(s)	418
MroXI	GAANNNNTTC	2 cut(s)	1056, 1559
MseI	TTAA	5 cut(s)	267, 708, 1215, 1292, 1650
MspA1I	CMGCKG	1 cut(s)	458
MspCI	CTTAAG	1 cut(s)	707
MspI	CCGG	2 cut(s)	419, 1370
MspR9I	CCNGG	5 cut(s)	605, 1167, 1310, 1437, 1626
MvaI	CCWGG	5 cut(s)	605, 1167, 1310, 1437, 1626
MwoI	GCNNNNNNNGC	3 cut(s)	761, 1522, 1727
NaeI	GCCGGC	1 cut(s)	420
NcoI	CCATGG	1 cut(s)	1473
NdeI	CATATG	1 cut(s)	1632
NdeII	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
NgoMIV	GCCGGC	1 cut(s)	418
NlaIII	CATG	7 cut(s)	253, 686, 749, 832, 1064, 1477, 1711
NmuCI	GTSAC	2 cut(s)	260, 1332
NsiI	ATGCAT	2 cut(s)	112, 1380
NspI	RCATGY	1 cut(s)	1711
NspV	TTCGAA	2 cut(s)	656, 1465
PagI	TCATGA	1 cut(s)	745
PceI	AGGCCT	1 cut(s)	1431
PciSI	GCTCTTC	1 cut(s)	1456
PdiI	GCCGGC	1 cut(s)	420
PdmI	GAANNNNTTC	2 cut(s)	1056, 1559
PfeI	GAWTC	6 cut(s)	319, 461, 548, 941, 1276, 1506
PfoI	TCCNGGA	1 cut(s)	1308
PkrI	GCNGC	2 cut(s)	484, 925
PleI	GAGTC	5 cut(s)	211, 564, 738, 793, 1121
PpsI	GAGTC	5 cut(s)	211, 564, 738, 793, 1121
PpuMI	RGGWCCY	1 cut(s)	851
PshBI	ATTAAT	1 cut(s)	267
Psp124BI	GAGCTC	3 cut(s)	636, 1451, 1551
Psp5II	RGGWCCY	1 cut(s)	851
Psp6I	CCWGG	5 cut(s)	603, 1165, 1308, 1435, 1624
PspFI	CCCAGC	1 cut(s)	1521
PspGI	CCWGG	5 cut(s)	603, 1165, 1308, 1435, 1624
PspPI	GGNCC	6 cut(s)	226, 416, 608, 851, 1343, 1470
PspPPI	RGGWCCY	1 cut(s)	851
PsuI	RGATCY	4 cut(s)	160, 1156, 1323, 1613
PvuII	CAGCTG	1 cut(s)	458
RsaI	GTAC	4 cut(s)	841, 969, 1164, 1224
RsaNI	GTAC	4 cut(s)	840, 968, 1163, 1223
SacI	GAGCTC	3 cut(s)	636, 1451, 1551
SapI	GCTCTTC	1 cut(s)	1456
SaqAI	TTAA	5 cut(s)	267, 708, 1215, 1292, 1650
SatI	GCNGC	2 cut(s)	483, 924
Sau3AI	GATC	9 cut(s)	160, 679, 907, 1036, 1128, 1156, 1318, 1323, 1613
Sau96I	GGNCC	6 cut(s)	226, 416, 608, 851, 1343, 1470
SchI	GAGTC	5 cut(s)	212, 565, 739, 794, 1122
ScrFI	CCNGG	5 cut(s)	605, 1167, 1310, 1437, 1626
SduI	GDGCHC	6 cut(s)	636, 704, 869, 1072, 1451, 1551
SfaNI	GCATC	5 cut(s)	119, 417, 573, 640, 1188
SfcI	CTRYAG	1 cut(s)	1573
SfuI	TTCGAA	2 cut(s)	656, 1465
SinI	GGWCC	3 cut(s)	226, 851, 1343
SmlI	CTYRAG	1 cut(s)	707
SmoI	CTYRAG	1 cut(s)	707
Sse9I	AATT	9 cut(s)	23, 29, 58, 136, 306, 379, 511, 1652, 1675
SseBI	AGGCCT	1 cut(s)	1431
SsiI	CCGC	3 cut(s)	434, 815, 1730
SspMI	CTAG	1 cut(s)	486
SstI	GAGCTC	3 cut(s)	636, 1451, 1551
StuI	AGGCCT	1 cut(s)	1431
StyD4I	CCNGG	5 cut(s)	603, 1165, 1308, 1435, 1624
StyI	CCWWGG	1 cut(s)	1473
TaaI	ACNGT	2 cut(s)	1227, 1273
TaiI	ACGT	1 cut(s)	1034
TaqI	TCGA	6 cut(s)	383, 656, 1072, 1355, 1465, 1608
TasI	AATT	9 cut(s)	23, 29, 58, 136, 306, 379, 511, 1652, 1675
TatI	WGTACW	1 cut(s)	1222
TfiI	GAWTC	6 cut(s)	319, 461, 548, 941, 1276, 1506
Tru1I	TTAA	5 cut(s)	267, 708, 1215, 1292, 1650
Tru9I	TTAA	5 cut(s)	267, 708, 1215, 1292, 1650
TscAI	CASTG	5 cut(s)	286, 811, 1138, 1200, 1278
TseFI	GTSAC	2 cut(s)	260, 1332
TseI	GCWGC	2 cut(s)	482, 923
Tsp45I	GTSAC	2 cut(s)	260, 1332
TspRI	CASTG	5 cut(s)	286, 811, 1138, 1200, 1278
Vha464I	CTTAAG	1 cut(s)	707
VpaK11BI	GGWCC	3 cut(s)	226, 851, 1343
VspI	ATTAAT	1 cut(s)	267
XapI	RAATTY	6 cut(s)	23, 136, 379, 511, 1652, 1675
XceI	RCATGY	1 cut(s)	1711
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1607
XmnI	GAANNNNTTC	2 cut(s)	1056, 1559
XspI	CTAG	1 cut(s)	486
ZraI	GACGTC	1 cut(s)	1032
Zsp2I	ATGCAT	2 cut(s)	112, 1380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.