FvH4_4g33710

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
31834436 .. 31837605
3170 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g33710.t1

Sequence Viewer

Length: 2415 bp
ATGGCAGCCAAAGGTGTGACAAGCTCATCCGACAAGGGAAATATAGACTTTCTCCTACAGATTGAGACAAAGGTTCGAAATTGGTGGGAGGATAAGAAAATTCTCATCAGTTCTGAAAATCCTGGCCACAAGTTCTCTGAAAAGTTCCCTTTTGATAGATTTATGGGACATCAATTCAGTCTCTCAAAACTAGAACAGCCGCCAGATATTCCTATTGATGTCATGAGATTCGCTTTGGCTTATGTTTGTGATGGTCCTGTTGATGCTGCAAAGATTGACTATCTACATAGCAATGCACTTTCTGTATTCGATGCTGCAAACACTGCCATCCTAAGTCTTACTAAAGAGATGTCATGTCACGAAGAATTTGTGGCTGGAAATTGGGAGCCTTGGTTGAGAACAGGTCCCCCTTCTACTTCTGCAGATAAAGTATTTGCCAATGACATAAACATTGCCTTGAACAAGACCAAGCAGTATTACGAGGCTTGCCAGTTTCGAGAAGCCCTTGAGTCTGGCTTTCTTGCGCTTCAAGATGCCAGGGATTGGTACAAGAGTTTATGTGGTGGTACTACTGGAATGAACTTTGATTTGGTGGTGCGTTTCATGAAAACGCAGACGCTTCTTGTGGCTCCAATCTGTCCACATTATTCGGAATATGTGTGGAGAGAAATTTTGCACAATGTAACGTACTTGGTGAAAACAGACTGGCCTGCAGCCGATGCTCCTGAAGATTCAACCCTCCACAGTATCCATAAGTACTTGAAACGCTTGACTGCTACACTCAAAAAACGGATTGAAAGAGAAAGGATTGAAAGAGAAAAAGACAAGTTGGTATACTCGAACATAGAAGTTTTACTGTATGTCAATGAGGACTCGTTTACATTAAAGACGGGGGAGGATGAGGAAGCTGAGCTGCCGGTTAGAGAGATGCAGGTCCTTCTACAGAACTTGAACTTAATTAAGAGAGAAATCGGCGTTCATTGGGTGCAAGTTCTGTCAGCTACCAACCCTCATGATCTTGCGAAAGCTGGCTTTCGTGTCGAACTGATCAAGAATCTACCTCCAGAACCTGGAAGGCCAACTAGTCTAGTCTTGAAACGTGGATCGCTTAATTCATCAAGTAATGCACAGTTAAAGCCATCCGCATATGTTTGTCCGCACAAGCGCTCCAACGGTGAATGTGACTTACCAGACCAAGGTGCTAGTAAACACCGTGATGATTTTATTCAGGTTCTAGAATGGTGTGATCAGCACAGTGAACAGAAGCATCGTCCAATAGACTATTTTCAGTCTTATCCTCCATACAAGTTAATATTCAAGGGTTCCTTCGACAAGGCAATGGATGCTGCGTGTGAGGAAAACAAATGGCTCCTGGTGAACTTGCAACGCAGGGAGGATCTCAGCTCACATAAGCTTAACCAGGACATCTGGGCAGACAAAGCCATCTCTCAGATCATCAGCACCAATTTCATCTTTTGGCAGGATTATTTTCATAAGCCTATAGGCGCTGCGGTTTCCAGACACTACGAGTTGGAGTCTAGAACTGTAGTGATCATCATTGACCCCATCACCGGCCAAGTATTGCGTTCGTGGAATGGAATGGTTCAACTGGAATTATTTCTAGGGGATCTAGTACTGTTCCTGAATAGTAGCCCCCGGCAAAAGCAAGTAGCGAAAGAGGAGGAGGAGGAAGTGCGTCGCGCAATGGAAGCTTCGATGGAAAGCTTGAGGTTTGAGACAAAATGTGGAAGTACCTCCAAAAAGAATCTAATACTGTCCTCCAATACTAGCCCCACGAATACTAAAGCAACTGAAGAAGATGAAGAGGAGGAACTGCTTAGCACAATGGCAGCTTCAATGGAAAGCATACAGGTTGAGACAAGTAGTACCGCAAGTTCATCAAAACAGGATATAGTTCCGTTGTTCAGTACTAGCCCCGGGAGTACTACATCAATTGAAGAAGAAGAGGAACGGCTGCGCGCATTGGAAGCTTTTGTGGAGAGGATGAAGTTGGAGACGAGTAATGCAAGTACCTCGAAAGGAGATGCAAGAGAAGAAGAGGAACTGCGGCGCACAATGGCAGCTTCCAGCATAGAAGATCCACTAGAGATGTTGAATCTCAACCCGATAGTAACTGAAGTTGATGAGGAGGAACCACCGTGGTCATGGGAAGATTTATTTGACGAAAGGAGTGCAAGTAGCTCTAAAGTTTATAATAATGTAAGTAGAGAAGAAGATGATGAGGAACTGCAGCGCGCATTGGTGGCTTCCTTGGGGAACTGGTGGGCAGGTAGTGCAAGTACCAAAGAAGAAGAAGAAGATGAGGAACTGCAACGCGCATTGGCAGCGTCCATGGAAAGTGTTGGAGAGGAAGAAGAAGCCAATTATTTGTGCAAATTTATCGATCAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

805

Amino Acids

91.49

Weight (kDa)

4.88

Isoelectric Point (pI)

57.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anticodon_1 PF08264 142 - 274 8.6e-13 Anticodon-binding domain of tRNA ligase
Thioredoxin_7 PF13899 442 - 494 6.5e-09 Thioredoxin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018429)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g33710
rosa_chinensis RchiOBHm_Chr4g0443181
rosa_laevigata RLG00000005949
rosa_multiflora Rmu_sc0007968.1_g000005
rosa_roxburghii Rroxscaffold_5G00383780
rosa_rugosa Rorug04G0344700
rosa_samantha Rh4BG410900 Rh4CG426400 Rh4DG406000
rosa_wichuraiana Rw4G034430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2214
Acc36I ACCTGC 2 cut(s) 922, 2279
AccB7I CCANNNNNTGG 2 cut(s) 543, 1070
AccI GTMKAC 1 cut(s) 834
AccII CGCG 4 cut(s) 1701, 1980, 2256, 2337
AciI CCGC 6 cut(s) 200, 1143, 1157, 1511, 1890, 2068
AclWI GGATC 4 cut(s) 1111, 1404, 1635, 2093
AcoI YGGCCR 2 cut(s) 124, 1573
AcsI RAATTY 4 cut(s) 99, 365, 669, 2396
AcuI CTGAAG 3 cut(s) 747, 1833, 2157
AfeI AGCGCT 1 cut(s) 1166
AfiI CCNNNNNNNGG 4 cut(s) 543, 1070, 1196, 1571
AhlI ACTAGT 1 cut(s) 1082
AjnI CCWGG 5 cut(s) 121, 536, 1069, 1371, 1419
AjuI GAANNNNNNNTTGG 2 cut(s) 572, 604
Alw26I GTCTC 5 cut(s) 59, 185, 1730, 1871, 2009
AlwI GGATC 4 cut(s) 1111, 1404, 1635, 2093
AlwNI CAGNNNCTG 1 cut(s) 1070
Ama87I CYCGRG 1 cut(s) 1937
Aor51HI AGCGCT 1 cut(s) 1166
AoxI GGCC 4 cut(s) 124, 707, 1076, 1573
ApoI RAATTY 4 cut(s) 99, 365, 669, 2396
Asp700I GAANNNNTTC 1 cut(s) 1617
AspS9I GGNCC 3 cut(s) 254, 404, 934
AsuC2I CCSGG 3 cut(s) 1657, 1938, 1939
AsuHPI GGTGA 4 cut(s) 706, 1187, 1387, 1561
AsuII TTCGAA 1 cut(s) 76
AvaI CYCGRG 1 cut(s) 1937
AvaII GGWCC 3 cut(s) 254, 404, 934
BaeI ACNNNNGTAYC 2 cut(s) 538, 571
BalI TGGCCA 1 cut(s) 126
BccI CCATC 6 cut(s) 245, 335, 1147, 1451, 1574, 1711
BceAI ACGGC 1 cut(s) 1988
BcgI CGANNNNNNTGC 5 cut(s) 2016, 2050, 2174, 2208, 2383
BciT130I CCWGG 5 cut(s) 123, 538, 1071, 1373, 1421
BciVI GTATCC 1 cut(s) 758
BclI TGATCA 3 cut(s) 1047, 1246, 1551
BcnI CCSGG 3 cut(s) 1657, 1938, 1939
BcoDI GTCTC 5 cut(s) 59, 185, 1730, 1871, 2009
BcuI ACTAGT 1 cut(s) 1082
BfmI CTRYAG 7 cut(s) 56, 420, 711, 941, 1500, 1545, 2249
BfoI RGCGCY 2 cut(s) 1168, 1509
BfuAI ACCTGC 2 cut(s) 922, 2279
BfuI GTATCC 1 cut(s) 758
BlpI GCTNAGC 2 cut(s) 909, 1838
BmcAI AGTACT 4 cut(s) 758, 1635, 1930, 1945
Bme1390I CCNGG 8 cut(s) 123, 538, 1071, 1373, 1421, 1657, 1938, 1939
Bme18I GGWCC 3 cut(s) 254, 404, 934
BmeT110I CYCGRG 1 cut(s) 1937
BmgT120I GGNCC 3 cut(s) 254, 404, 934
BmiI GGNNCC 6 cut(s) 387, 406, 630, 1324, 1370, 2154
BmrFI CCNGG 8 cut(s) 123, 538, 1071, 1373, 1421, 1657, 1938, 1939
BmsI GCATC 8 cut(s) 253, 301, 523, 709, 918, 1276, 1333, 2035
BpmI CTGGAG 1 cut(s) 1047
Bpu1102I GCTNAGC 2 cut(s) 909, 1838
Bpu14I TTCGAA 1 cut(s) 76
BpuEI CTTGAG 2 cut(s) 527, 1747
BpuMI CCSGG 3 cut(s) 1657, 1938, 1939
Bsa29I ATCGAT 1 cut(s) 2403
BsaJI CCNNGG 9 cut(s) 389, 537, 1195, 1655, 1936, 1937, 2159, 2271, 2352
BsaXI ACNNNNNCTCC 6 cut(s) 377, 407, 1151, 1181, 2182, 2212
Bsc4I CCNNNNNNNGG 4 cut(s) 543, 1070, 1196, 1571
Bse118I RCCGGY 2 cut(s) 916, 1571
Bse1I ACTGG 5 cut(s) 490, 577, 710, 1614, 2285
Bse3DI GCAATG 4 cut(s) 298, 450, 1344, 1710
BseBI CCWGG 5 cut(s) 123, 538, 1071, 1373, 1421
BseCI ATCGAT 1 cut(s) 2403
BseDI CCNNGG 9 cut(s) 389, 537, 1195, 1655, 1936, 1937, 2159, 2271, 2352
BseGI GGATG 6 cut(s) 26, 327, 904, 1139, 1348, 2010
BseLI CCNNNNNNNGG 4 cut(s) 543, 1070, 1196, 1571
BseMI GCAATG 4 cut(s) 298, 450, 1344, 1710
BseMII CTCAG 3 cut(s) 900, 1414, 1463
BseNI ACTGG 5 cut(s) 490, 577, 710, 1614, 2285
BsePI GCGCGC 2 cut(s) 1978, 2254
BseRI GAGGAG 5 cut(s) 1694, 1697, 1700, 1841, 2162
Bsh1236I CGCG 4 cut(s) 1701, 1980, 2256, 2337
BshFI GGCC 4 cut(s) 126, 709, 1078, 1575
BshVI ATCGAT 1 cut(s) 2403
BsiHKCI CYCGRG 1 cut(s) 1937
BsiSI CCGG 4 cut(s) 917, 1572, 1657, 1938
BslFI GGGAC 2 cut(s) 180, 390
BslI CCNNNNNNNGG 4 cut(s) 543, 1070, 1196, 1571
BsmAI GTCTC 5 cut(s) 59, 185, 1730, 1871, 2009
BsmBI CGTCTC 1 cut(s) 2009
BsmFI GGGAC 2 cut(s) 180, 390
BsnI GGCC 4 cut(s) 126, 709, 1078, 1575
BsoBI CYCGRG 1 cut(s) 1937
Bsp119I TTCGAA 1 cut(s) 76
Bsp1720I GCTNAGC 2 cut(s) 909, 1838
Bsp19I CCATGG 1 cut(s) 2352
BspACI CCGC 6 cut(s) 200, 1143, 1157, 1511, 1890, 2068
BspANI GGCC 4 cut(s) 126, 709, 1078, 1575
BspCNI CTCAG 3 cut(s) 901, 1413, 1462
BspDI ATCGAT 1 cut(s) 2403
BspFNI CGCG 4 cut(s) 1701, 1980, 2256, 2337
BspHI TCATGA 3 cut(s) 222, 603, 1012
BspLI GGNNCC 6 cut(s) 387, 406, 630, 1324, 1370, 2154
BspMAI CTGCAG 3 cut(s) 424, 715, 2253
BspMI ACCTGC 2 cut(s) 922, 2279
BspPI GGATC 4 cut(s) 1111, 1404, 1635, 2093
BspT104I TTCGAA 1 cut(s) 76
BsrDI GCAATG 4 cut(s) 298, 450, 1344, 1710
BsrFI RCCGGY 2 cut(s) 916, 1571
BsrI ACTGG 5 cut(s) 490, 577, 710, 1614, 2285
BssAI RCCGGY 2 cut(s) 916, 1571
BssECI CCNNGG 9 cut(s) 389, 537, 1195, 1655, 1936, 1937, 2159, 2271, 2352
BssHII GCGCGC 2 cut(s) 1978, 2254
BssNAI GTATAC 1 cut(s) 835
BssT1I CCWWGG 4 cut(s) 389, 1195, 2271, 2352
Bst1107I GTATAC 1 cut(s) 835
Bst2UI CCWGG 5 cut(s) 123, 538, 1071, 1373, 1421
Bst6I CTCTTC 3 cut(s) 1818, 1959, 2052
BstAPI GCANNNNNTGC 4 cut(s) 323, 719, 1343, 2294
BstBI TTCGAA 1 cut(s) 76
BstC8I GCNNGC 5 cut(s) 487, 711, 1030, 1980, 2256
BstDEI CTNAG 5 cut(s) 332, 909, 1400, 1449, 1838
BstDSI CCRYGG 2 cut(s) 2159, 2352
BstF5I GGATG 6 cut(s) 26, 327, 904, 1139, 1348, 2010
BstFNI CGCG 4 cut(s) 1701, 1980, 2256, 2337
BstH2I RGCGCY 2 cut(s) 1168, 1509
BstMAI GTCTC 5 cut(s) 59, 185, 1730, 1871, 2009
BstMWI GCNNNNNNNGC 9 cut(s) 323, 719, 1343, 1439, 1709, 1988, 2264, 2294, 2345
BstNI CCWGG 5 cut(s) 123, 538, 1071, 1373, 1421
BstSCI CCNGG 8 cut(s) 121, 536, 1069, 1371, 1419, 1655, 1936, 1937
BstSFI CTRYAG 7 cut(s) 56, 420, 711, 941, 1500, 1545, 2249
BstUI CGCG 4 cut(s) 1701, 1980, 2256, 2337
BstX2I RGATCY 3 cut(s) 1396, 1627, 2098
BstYI RGATCY 3 cut(s) 1396, 1627, 2098
BstZ17I GTATAC 1 cut(s) 835
Bsu15I ATCGAT 1 cut(s) 2403
BsuI GTATCC 1 cut(s) 758
BsuRI GGCC 4 cut(s) 126, 709, 1078, 1575
BsuTUI ATCGAT 1 cut(s) 2403
BtgI CCRYGG 2 cut(s) 2159, 2352
BtsCI GGATG 6 cut(s) 26, 327, 904, 1139, 1348, 2010
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 2 cut(s) 321, 1261
BveI ACCTGC 2 cut(s) 922, 2279
Cac8I GCNNGC 5 cut(s) 487, 711, 1030, 1980, 2256
CaiI CAGNNNCTG 1 cut(s) 1070
CciI TCATGA 3 cut(s) 222, 603, 1012
Cfr10I RCCGGY 2 cut(s) 916, 1571
Cfr13I GGNCC 3 cut(s) 254, 404, 934
Cfr9I CCCGGG 1 cut(s) 1937
ClaI ATCGAT 1 cut(s) 2403
CseI GACGC 3 cut(s) 625, 1685, 2337
CviAII CATG 6 cut(s) 223, 354, 604, 1013, 2166, 2353
DdeI CTNAG 5 cut(s) 332, 909, 1400, 1449, 1838
EaeI YGGCCR 2 cut(s) 124, 1573
Eam1104I CTCTTC 3 cut(s) 1818, 1959, 2052
EarI CTCTTC 3 cut(s) 1818, 1959, 2052
Eco130I CCWWGG 4 cut(s) 389, 1195, 2271, 2352
Eco47I GGWCC 3 cut(s) 254, 404, 934
Eco47III AGCGCT 1 cut(s) 1166
Eco57I CTGAAG 3 cut(s) 747, 1833, 2157
Eco88I CYCGRG 1 cut(s) 1937
EcoO109I RGGNCCY 2 cut(s) 404, 934
EcoRII CCWGG 5 cut(s) 121, 536, 1069, 1371, 1419
EcoT14I CCWWGG 4 cut(s) 389, 1195, 2271, 2352
ErhI CCWWGG 4 cut(s) 389, 1195, 2271, 2352
Esp3I CGTCTC 1 cut(s) 2009
FaeI CATG 6 cut(s) 226, 357, 607, 1016, 2169, 2356
FalI AAGNNNNNCTT 2 cut(s) 1310, 1342
FaqI GGGAC 2 cut(s) 180, 390
FatI CATG 6 cut(s) 222, 353, 603, 1012, 2165, 2352
FauNDI CATATG 1 cut(s) 1147
FbaI TGATCA 3 cut(s) 1047, 1246, 1551
FblI GTMKAC 1 cut(s) 834
FokI GGATG 6 cut(s) 13, 314, 911, 1126, 1355, 2017
GsuI CTGGAG 1 cut(s) 1047
HaeII RGCGCY 2 cut(s) 1168, 1509
HaeIII GGCC 4 cut(s) 126, 709, 1078, 1575
HapII CCGG 4 cut(s) 917, 1572, 1657, 1938
HgaI GACGC 3 cut(s) 625, 1685, 2337
Hin1II CATG 6 cut(s) 226, 357, 607, 1016, 2169, 2356
HindIII AAGCTT 4 cut(s) 1412, 1710, 1723, 1989
HinfI GANTC 8 cut(s) 228, 509, 731, 872, 1054, 1535, 1765, 2116
HpaII CCGG 4 cut(s) 917, 1572, 1657, 1938
HphI GGTGA 4 cut(s) 706, 1187, 1387, 1561
Hpy166II GTNNAC 6 cut(s) 641, 835, 879, 1208, 1259, 1378
Hpy188I TCNGA 5 cut(s) 31, 115, 139, 652, 1452
Hpy8I GTNNAC 6 cut(s) 641, 835, 879, 1208, 1259, 1378
Hpy99I CGWCG 1 cut(s) 1701
HpyAV CCTTC 4 cut(s) 420, 947, 1068, 1336
HpyCH4IV ACGT 2 cut(s) 686, 1099
HpyF10VI GCNNNNNNNGC 9 cut(s) 323, 719, 1343, 1439, 1709, 1988, 2264, 2294, 2345
HpyF3I CTNAG 5 cut(s) 332, 909, 1400, 1449, 1838
HpySE526I ACGT 2 cut(s) 686, 1099
Hsp92II CATG 6 cut(s) 226, 357, 607, 1016, 2169, 2356
Ksp22I TGATCA 3 cut(s) 1047, 1246, 1551
LmnI GCTCC 5 cut(s) 385, 634, 727, 1172, 1374
LweI GCATC 8 cut(s) 253, 301, 523, 709, 918, 1276, 1333, 2035
MaeII ACGT 2 cut(s) 686, 1099
MaeIII GTNAC 5 cut(s) 16, 356, 682, 1181, 2131
MfeI CAATTG 1 cut(s) 1953
MflI RGATCY 3 cut(s) 1396, 1627, 2098
MlsI TGGCCA 1 cut(s) 126
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 3 cut(s) 518, 866, 1544
MmeI TCCRAC 5 cut(s) 54, 1194, 1512, 1992, 2344
Mox20I TGGCCA 1 cut(s) 126
MroXI GAANNNNTTC 1 cut(s) 1617
MscI TGGCCA 1 cut(s) 126
MseI TTAA 7 cut(s) 884, 956, 960, 1110, 1133, 1310, 1416
MslI CAYNNNNRTG 2 cut(s) 291, 1215
Msp20I TGGCCA 1 cut(s) 126
MspI CCGG 4 cut(s) 917, 1572, 1657, 1938
MspR9I CCNGG 8 cut(s) 123, 538, 1071, 1373, 1421, 1657, 1938, 1939
MunI CAATTG 1 cut(s) 1953
MvaI CCWGG 5 cut(s) 123, 538, 1071, 1373, 1421
MvnI CGCG 4 cut(s) 1701, 1980, 2256, 2337
MwoI GCNNNNNNNGC 9 cut(s) 323, 719, 1343, 1439, 1709, 1988, 2264, 2294, 2345
NciI CCSGG 3 cut(s) 1657, 1938, 1939
NcoI CCATGG 1 cut(s) 2352
NdeI CATATG 1 cut(s) 1147
NlaIII CATG 6 cut(s) 226, 357, 607, 1016, 2169, 2356
NlaIV GGNNCC 6 cut(s) 387, 406, 630, 1324, 1370, 2154
NmuCI GTSAC 3 cut(s) 16, 356, 1181
NspV TTCGAA 1 cut(s) 76
PacI TTAATTAA 1 cut(s) 960
PagI TCATGA 3 cut(s) 222, 603, 1012
PauI GCGCGC 2 cut(s) 1978, 2254
PdmI GAANNNNTTC 1 cut(s) 1617
PfeI GAWTC 5 cut(s) 228, 731, 1054, 1765, 2116
PflMI CCANNNNNTGG 2 cut(s) 543, 1070
PleI GAGTC 3 cut(s) 517, 866, 1543
PpsI GAGTC 3 cut(s) 517, 866, 1543
PpuMI RGGWCCY 2 cut(s) 404, 934
PsiI TTATAA 1 cut(s) 2214
Psp5II RGGWCCY 2 cut(s) 404, 934
Psp6I CCWGG 5 cut(s) 121, 536, 1069, 1371, 1419
PspGI CCWGG 5 cut(s) 121, 536, 1069, 1371, 1419
PspN4I GGNNCC 6 cut(s) 387, 406, 630, 1324, 1370, 2154
PspPI GGNCC 3 cut(s) 254, 404, 934
PspPPI RGGWCCY 2 cut(s) 404, 934
PsrI GAACNNNNNNTAC 2 cut(s) 1879, 1911
PstI CTGCAG 3 cut(s) 424, 715, 2253
PstNI CAGNNNCTG 1 cut(s) 1070
PsuI RGATCY 3 cut(s) 1396, 1627, 2098
PteI GCGCGC 2 cut(s) 1978, 2254
RseI CAYNNNNRTG 2 cut(s) 291, 1215
SaqAI TTAA 7 cut(s) 884, 956, 960, 1110, 1133, 1310, 1416
Sau96I GGNCC 3 cut(s) 254, 404, 934
ScaI AGTACT 4 cut(s) 758, 1635, 1930, 1945
SchI GAGTC 3 cut(s) 518, 866, 1544
ScrFI CCNGG 8 cut(s) 123, 538, 1071, 1373, 1421, 1657, 1938, 1939
SfaNI GCATC 8 cut(s) 253, 301, 523, 709, 918, 1276, 1333, 2035
SfcI CTRYAG 7 cut(s) 56, 420, 711, 941, 1500, 1545, 2249
SfuI TTCGAA 1 cut(s) 76
SinI GGWCC 3 cut(s) 254, 404, 934
SmaI CCCGGG 1 cut(s) 1939
SmiMI CAYNNNNRTG 2 cut(s) 291, 1215
SmlI CTYRAG 2 cut(s) 506, 1726
SmoI CTYRAG 2 cut(s) 506, 1726
SpeI ACTAGT 1 cut(s) 1082
SsiI CCGC 6 cut(s) 200, 1143, 1157, 1511, 1890, 2068
SspI AATATT 1 cut(s) 1314
StyD4I CCNGG 8 cut(s) 121, 536, 1069, 1371, 1419, 1655, 1936, 1937
StyI CCWWGG 4 cut(s) 389, 1195, 2271, 2352
TaiI ACGT 2 cut(s) 689, 1102
TaqI TCGA 9 cut(s) 76, 309, 496, 839, 1041, 1329, 1715, 2036, 2403
TatI WGTACW 4 cut(s) 756, 1633, 1928, 1943
TauI GCSGC 2 cut(s) 202, 2071
TfiI GAWTC 5 cut(s) 228, 731, 1054, 1765, 2116
Tru1I TTAA 7 cut(s) 884, 956, 960, 1110, 1133, 1310, 1416
Tru9I TTAA 7 cut(s) 884, 956, 960, 1110, 1133, 1310, 1416
TscAI CASTG 2 cut(s) 328, 1261
TseFI GTSAC 3 cut(s) 16, 356, 1181
Tsp45I GTSAC 3 cut(s) 16, 356, 1181
TspGWI ACGGA 2 cut(s) 805, 1908
TspMI CCCGGG 1 cut(s) 1937
TspRI CASTG 2 cut(s) 328, 1261
Van91I CCANNNNNTGG 2 cut(s) 543, 1070
VpaK11BI GGWCC 3 cut(s) 254, 404, 934
XapI RAATTY 4 cut(s) 99, 365, 669, 2396
XbaI TCTAGA 2 cut(s) 1234, 1538
XcmI CCANNNNNNNNNTGG 1 cut(s) 2163
XmaI CCCGGG 1 cut(s) 1937
XmiI GTMKAC 1 cut(s) 834
XmnI GAANNNNTTC 1 cut(s) 1617
ZrmI AGTACT 4 cut(s) 758, 1635, 1930, 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.