Rorug04G0344700

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000598
Physical Location & Seq
Forward (+)
51664318 .. 51670444
6127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0344700.1

Sequence Viewer

Length: 1446 bp
ATGCCACCGAAGGCATTGGACTATGAGTCACTGAATGAGAACGTGAAGAAGGTTCAGTATGCTGTTAGAGGCGAGTTGTATCTTCGAGCTTCTGAGCTTCAGAAGGAAGGAAAGAAGATCATTTTCACAAATGTTGGGAATCCTCATGCTCTCGGACAGAAGCCTCTAACTTTTCCTCGCCAGGTGGTTGCTCTATGCCAAGCTCCATTTTTATTAGATGACCCCAATGTAGGACTGCTCTTTCCTGCTGATGCAATTTCAAGAGCTAAACATTACCTCTCAGTTACTTCTGGTGGTCTAGGTGCTTACAGTGATTCTCGAGGTATTCCTGCAATTAGGAAGGAAGTGGCAGAGTTCATTGAAAAACGTGATGGTTATCCAAGTGACCCAGAACTCATATTTCTCACTGATGGTGCCAGTAAAGGTGTAATGCAGATCTTAAATGCTGTTATCCGTGGTGCAGGGGATGGGGTTCTGGTTCCAGTTCCACAGTACCCACTTTACTCAGCTGCAATATCTCTATTTGGTGGTTCTCTTGTTCCATATTACCTGGAAGAAACTGCGAACTGGGGTCTCGATGTTACTGATCTTCGCCAGTCAGTTATAATGGCTCGCTCCAAAGGAATTACTGTGAGAGCAATGGTGATTATAAACCCTGGTAACCCTACTGGTCAGTGTCTTAGTGAAGCTAATTTAAGAGAGATAATAAACTTCTGTATCCAAGAAAACCTGGTCTTGCTTGGTGATGAAGTTTATCAGCAGAATGTATACCAGGATGAGCGCCCCTTTATTAGTGCCAGAAAGGTGTTGATGGGTATGGGACCATTCATAAGCAAGGAACTCCAGCTTGTTTCTTTCCACACTGTGTCCAAAGGATATTGGGGTGAATGTGGACAGCGTGGTGGATACTTTGAGATGACAAATATTCCTCCACAGGCAGTTGATGAGATATATAAGGTTGCATCAGTGTCACTCAGTCCAAATGTTCCTGCACAAATATTTATGGGCCTTATGGTCAACCCTCCCAAACCTGGAGATATTTCATATGAGCAGTTTGTTAGGGAAAGCAAAGGGATCCTTGAATCTCTGAGGAGAAGAGCACAGTTAATGACTGATGGATTTAACAGCTGCAGAAACGTAGTTTGTAATTTCACAGAAGGTGCCATGTACTCATTCCCTCAGATACGCTTGCCACCAAGAGCAATACAGGCCGCTAAAAGCGCTGGAAAAGTTCCTGATGTTTTCTACTGTCTCAAGCTTTTGGAAGCCACAGGCATTTCCACTGTTCCTGGTTCAGGGTTTGGACAGAAAGATGGGGTCTTCCACTTGAGGACAACCATCTTACCAGCTGAGGAAGATATGCCTGCTATCATGGACAGTTTCAAGAAGTTCAATAATGAGTTCATGGAGCAATATGAAGATGACAGAGGCTATTCAAGGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

481

Amino Acids

53.19

Weight (kDa)

5.98

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 85 - 448 2.8e-36 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000598)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09620
fragaria_vesca FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_3g34581 FvH4_4g33720 FvH4_4g33720
malus_domestica MD08G1244600.v1.1 MD15G1439400.v1.1
prunus_persica Prupe.1G582000_v2.0.a1 Prupe.2G015100_v2.0.a1 Prupe.2G123100_v2.0.a1
pyrus_communis pycom08g21210 pycom08g21220 pycom15g38730
rosa_chinensis RchiOBHm_Chr1g0336121 RchiOBHm_Chr1g0353811 RchiOBHm_Chr1g0373331 RchiOBHm_Chr4g0443191 RchiOBHm_Chr4g0443201 RchiOBHm_Chr4g0443211
rosa_laevigata RLG00000003122 RLG00000005948 RLG00000026826 RLG00000028251 RLG00000028252 RLG00000028253 RLG00000029377
rosa_multiflora Rmu_co8002498.1_g000001 Rmu_co8262279.1_g000001 Rmu_co8314139.1_g000001 Rmu_co8393711.1_g000001 Rmu_co8419167.1_g000001 Rmu_sc0007968.1_g000004 Rmu_sc0018919.1_g000004 Rmu_sc0027447.1_g000001
rosa_roxburghii Rroxscaffold_4G00284260 Rroxscaffold_4G00301490 Rroxscaffold_4G00315860 Rroxscaffold_5G00383790 Rroxscaffold_5G00383800
rosa_rugosa Rorug01G0123100 Rorug01G0238700 Rorug01G0377100 Rorug01G0377100 Rorug01G0377200 Rorug01G0377300 Rorug04G0344700 Rorug05G0347900.1
rosa_samantha Rh1AG143800 Rh1AG250300 Rh1AG386300 Rh1BG113400 Rh1BG220800 Rh1BG220900 Rh1BG350400 Rh1CG135500 Rh1CG233100 Rh1CG363500 Rh1DG150200 Rh1DG247700 Rh1DG247800 Rh1DG381300 Rh4AG399400 Rh4AG399500 Rh4BG411000 Rh4BG411100 Rh4BG411200 Rh4CG426500 Rh4CG426600 Rh4DG406100 Rh4DG406200 Rh4DG406300
rosa_wichuraiana Rw0G015190 Rw1G021850 Rw1G034870 Rw4G034440 Rw4G034450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 605, 650
AccB1I GGYRCC 2 cut(s) 413, 1160
AccI GTMKAC 1 cut(s) 768
AciI CCGC 1 cut(s) 1212
AclWI GGATC 2 cut(s) 1069, 1082
AcuI CTGAAG 1 cut(s) 83
AdeI CACNNNGTG 1 cut(s) 865
AfaI GTAC 2 cut(s) 494, 1169
AfeI AGCGCT 1 cut(s) 1222
AfiI CCNNNNNNNGG 3 cut(s) 230, 1031, 1295
AgsI TTSAA 6 cut(s) 261, 362, 1082, 1384, 1393, 1437
AhdI GACNNNNNGTC 1 cut(s) 25
AjnI CCWGG 7 cut(s) 180, 549, 655, 729, 771, 1030, 1288
Alw21I GWGCWC 1 cut(s) 1102
Alw26I GTCTC 2 cut(s) 578, 1256
AlwI GGATC 2 cut(s) 1069, 1082
Ama87I CYCGRG 1 cut(s) 318
Aor51HI AGCGCT 1 cut(s) 1222
AoxI GGCC 2 cut(s) 1006, 1209
ApeKI GCWGC 2 cut(s) 509, 1128
AspLEI GCGC 2 cut(s) 783, 1223
AspS9I GGNCC 2 cut(s) 821, 1006
AsuHPI GGTGA 3 cut(s) 655, 755, 896
AvaI CYCGRG 1 cut(s) 318
AvaII GGWCC 1 cut(s) 821
BaeI ACNNNNGTAYC 2 cut(s) 700, 733
BamHI GGATCC 1 cut(s) 1074
BanI GGYRCC 2 cut(s) 413, 1160
BbsI GAAGAC 1 cut(s) 1312
Bbv12I GWGCWC 1 cut(s) 1102
BbvCI CCTCAGC 1 cut(s) 1350
BbvI GCAGC 2 cut(s) 496, 1115
BccI CCATC 7 cut(s) 365, 404, 461, 805, 1109, 1307, 1346
BciT130I CCWGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
BciVI GTATCC 2 cut(s) 728, 899
BcoDI GTCTC 2 cut(s) 578, 1256
BfaI CTAG 1 cut(s) 299
BfmI CTRYAG 1 cut(s) 1129
BfoI RGCGCY 2 cut(s) 784, 1224
BfuI GTATCC 2 cut(s) 728, 899
BglII AGATCT 1 cut(s) 435
BisI GCNGC 3 cut(s) 510, 1129, 1212
BlsI GCNGC 3 cut(s) 511, 1130, 1213
Bme1390I CCNGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
Bme18I GGWCC 1 cut(s) 821
BmeRI GACNNNNNGTC 1 cut(s) 25
BmeT110I CYCGRG 1 cut(s) 318
BmgT120I GGNCC 2 cut(s) 821, 1006
BmiI GGNNCC 5 cut(s) 415, 480, 822, 1076, 1162
BmrFI CCNGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
BmrI ACTGGG 1 cut(s) 577
BmsI GCATC 2 cut(s) 241, 971
BmuI ACTGGG 1 cut(s) 577
BpiI GAAGAC 1 cut(s) 1312
BpmI CTGGAG 2 cut(s) 827, 1053
Bpu10I CCTNAGC 1 cut(s) 1350
BpuEI CTTGAG 2 cut(s) 1238, 1348
BsaBI GATNNNNATC 1 cut(s) 375
BsaI GGTCTC 1 cut(s) 578
BsaJI CCNNGG 2 cut(s) 454, 655
Bsc4I CCNNNNNNNGG 3 cut(s) 230, 1031, 1295
Bse1I ACTGG 5 cut(s) 417, 482, 572, 595, 673
Bse3DI GCAATG 1 cut(s) 645
Bse8I GATNNNNATC 1 cut(s) 375
BseBI CCWGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
BseDI CCNNGG 2 cut(s) 454, 655
BseGI GGATG 3 cut(s) 472, 781, 1446
BseJI GATNNNNATC 1 cut(s) 375
BseLI CCNNNNNNNGG 3 cut(s) 230, 1031, 1295
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 7 cut(s) 84, 294, 519, 988, 1079, 1193, 1341
BseNI ACTGG 5 cut(s) 417, 482, 572, 595, 673
BseRI GAGGAG 1 cut(s) 1105
BseXI GCAGC 2 cut(s) 496, 1115
BsgI GTGCAG 2 cut(s) 480, 975
BshFI GGCC 2 cut(s) 1008, 1211
BshNI GGYRCC 2 cut(s) 413, 1160
BsiHKAI GWGCWC 1 cut(s) 1102
BsiHKCI CYCGRG 1 cut(s) 318
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 3 cut(s) 230, 1031, 1295
BsmAI GTCTC 2 cut(s) 578, 1256
BsmFI GGGAC 1 cut(s) 834
BsnI GGCC 2 cut(s) 1008, 1211
Bso31I GGTCTC 1 cut(s) 578
BsoBI CYCGRG 1 cut(s) 318
Bsp1286I GDGCHC 1 cut(s) 1102
Bsp143I GATC 4 cut(s) 117, 435, 586, 1074
BspACI CCGC 1 cut(s) 1212
BspANI GGCC 2 cut(s) 1008, 1211
BspCNI CTCAG 7 cut(s) 85, 293, 518, 987, 1080, 1192, 1342
BspLI GGNNCC 5 cut(s) 415, 480, 822, 1076, 1162
BspMAI CTGCAG 1 cut(s) 1133
BspPI GGATC 2 cut(s) 1069, 1082
BspQI GCTCTTC 1 cut(s) 1090
BspT107I GGYRCC 2 cut(s) 413, 1160
BspTNI GGTCTC 1 cut(s) 578
BsrDI GCAATG 1 cut(s) 645
BsrI ACTGG 5 cut(s) 417, 482, 572, 595, 673
BssECI CCNNGG 2 cut(s) 454, 655
BssMI GATC 4 cut(s) 117, 435, 586, 1074
BssNAI GTATAC 1 cut(s) 769
Bst1107I GTATAC 1 cut(s) 769
Bst2UI CCWGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
Bst4CI ACNGT 8 cut(s) 311, 492, 631, 865, 1104, 1250, 1285, 1379
Bst6I CTCTTC 1 cut(s) 1090
BstC8I GCNNGC 3 cut(s) 613, 1190, 1365
BstDEI CTNAG 8 cut(s) 93, 280, 505, 680, 974, 1088, 1179, 1350
BstDSI CCRYGG 1 cut(s) 454
BstEII GGTNACC 1 cut(s) 659
BstENI CCTNNNNNAGG 1 cut(s) 1293
BstF5I GGATG 3 cut(s) 472, 781, 1446
BstH2I RGCGCY 2 cut(s) 784, 1224
BstHHI GCGC 2 cut(s) 783, 1223
BstKTI GATC 4 cut(s) 120, 438, 589, 1077
BstMAI GTCTC 2 cut(s) 578, 1256
BstMBI GATC 4 cut(s) 117, 435, 586, 1074
BstMWI GCNNNNNNNGC 2 cut(s) 1208, 1220
BstNI CCWGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
BstPI GGTNACC 1 cut(s) 659
BstSCI CCNGG 7 cut(s) 180, 549, 655, 729, 771, 1030, 1288
BstSFI CTRYAG 1 cut(s) 1129
BstV1I GCAGC 2 cut(s) 496, 1115
BstV2I GAAGAC 1 cut(s) 1312
BstX2I RGATCY 2 cut(s) 435, 1074
BstYI RGATCY 2 cut(s) 435, 1074
BstZ17I GTATAC 1 cut(s) 769
BsuI GTATCC 2 cut(s) 728, 899
BsuRI GGCC 2 cut(s) 1008, 1211
BtgI CCRYGG 1 cut(s) 454
BtsCI GGATG 3 cut(s) 472, 781, 1446
BtsIMutI CAGTG 7 cut(s) 29, 316, 405, 680, 861, 972, 1281
Cac8I GCNNGC 3 cut(s) 613, 1190, 1365
CfoI GCGC 2 cut(s) 783, 1223
Cfr13I GGNCC 2 cut(s) 821, 1006
CsiI ACCWGGT 1 cut(s) 729
Csp6I GTAC 2 cut(s) 493, 1168
CviAII CATG 4 cut(s) 146, 1165, 1372, 1405
CviQI GTAC 2 cut(s) 493, 1168
DdeI CTNAG 8 cut(s) 93, 280, 505, 680, 974, 1088, 1179, 1350
DpnI GATC 4 cut(s) 119, 437, 588, 1076
DpnII GATC 4 cut(s) 117, 435, 586, 1074
DraIII CACNNNGTG 1 cut(s) 865
DriI GACNNNNNGTC 1 cut(s) 25
Eam1104I CTCTTC 1 cut(s) 1090
Eam1105I GACNNNNNGTC 1 cut(s) 25
EarI CTCTTC 1 cut(s) 1090
Eco31I GGTCTC 1 cut(s) 578
Eco47I GGWCC 1 cut(s) 821
Eco47III AGCGCT 1 cut(s) 1222
Eco57I CTGAAG 1 cut(s) 83
Eco88I CYCGRG 1 cut(s) 318
Eco91I GGTNACC 1 cut(s) 659
EcoNI CCTNNNNNAGG 1 cut(s) 1293
EcoO65I GGTNACC 1 cut(s) 659
EcoRII CCWGG 7 cut(s) 180, 549, 655, 729, 771, 1030, 1288
FaeI CATG 4 cut(s) 149, 1168, 1375, 1408
FalI AAGNNNNNCTT 2 cut(s) 1062, 1094
FaqI GGGAC 1 cut(s) 834
FatI CATG 4 cut(s) 145, 1164, 1371, 1404
FauNDI CATATG 1 cut(s) 1045
FblI GTMKAC 1 cut(s) 768
Fnu4HI GCNGC 3 cut(s) 510, 1129, 1212
FokI GGATG 2 cut(s) 479, 788
Fsp4HI GCNGC 3 cut(s) 510, 1129, 1212
FspBI CTAG 1 cut(s) 299
GlaI GCGC 2 cut(s) 782, 1222
GluI GCNGC 3 cut(s) 510, 1129, 1212
GsuI CTGGAG 2 cut(s) 827, 1053
HaeII RGCGCY 2 cut(s) 784, 1224
HaeIII GGCC 2 cut(s) 1008, 1211
HhaI GCGC 2 cut(s) 783, 1223
Hin1II CATG 4 cut(s) 149, 1168, 1375, 1408
Hin6I GCGC 2 cut(s) 781, 1221
HinP1I GCGC 2 cut(s) 781, 1221
HincII GTYRAC 1 cut(s) 1018
HindII GTYRAC 1 cut(s) 1018
HindIII AAGCTT 1 cut(s) 1256
HinfI GANTC 4 cut(s) 26, 139, 314, 1082
HphI GGTGA 3 cut(s) 655, 755, 896
Hpy166II GTNNAC 3 cut(s) 769, 893, 1018
Hpy188I TCNGA 5 cut(s) 94, 102, 155, 1089, 1182
Hpy188III TCNNGA 5 cut(s) 261, 318, 575, 1235, 1384
Hpy8I GTNNAC 3 cut(s) 769, 893, 1018
HpyAV CCTTC 6 cut(s) 4, 43, 97, 101, 334, 1151
HpyCH4III ACNGT 8 cut(s) 311, 492, 631, 865, 1104, 1250, 1285, 1379
HpyCH4IV ACGT 3 cut(s) 42, 367, 1137
HpyCH4V TGCA 8 cut(s) 254, 332, 433, 461, 512, 962, 992, 1131
HpyF10VI GCNNNNNNNGC 2 cut(s) 1208, 1220
HpyF3I CTNAG 8 cut(s) 93, 280, 505, 680, 974, 1088, 1179, 1350
HpySE526I ACGT 3 cut(s) 42, 367, 1137
Hsp92II CATG 4 cut(s) 149, 1168, 1375, 1408
HspAI GCGC 2 cut(s) 781, 1221
Kzo9I GATC 4 cut(s) 117, 435, 586, 1074
LguI GCTCTTC 1 cut(s) 1090
LmnI GCTCC 3 cut(s) 208, 620, 1408
Lsp1109I GCAGC 2 cut(s) 496, 1115
LweI GCATC 2 cut(s) 241, 971
MabI ACCWGGT 1 cut(s) 729
MaeI CTAG 1 cut(s) 299
MaeII ACGT 3 cut(s) 42, 367, 1137
MaeIII GTNAC 6 cut(s) 27, 283, 383, 580, 659, 969
MalI GATC 4 cut(s) 119, 437, 588, 1076
MboI GATC 4 cut(s) 117, 435, 586, 1074
MboII GAAGA 9 cut(s) 58, 74, 127, 566, 581, 1107, 1312, 1367, 1430
MflI RGATCY 2 cut(s) 435, 1074
MhlI GDGCHC 1 cut(s) 1102
MluCI AATT 5 cut(s) 255, 333, 624, 691, 1147
MlyI GAGTC 1 cut(s) 35
MseI TTAA 4 cut(s) 440, 695, 1106, 1122
MspA1I CMGCKG 3 cut(s) 509, 1128, 1349
MspR9I CCNGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
MvaI CCWGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
MwoI GCNNNNNNNGC 2 cut(s) 1208, 1220
NdeI CATATG 1 cut(s) 1045
NdeII GATC 4 cut(s) 117, 435, 586, 1074
NlaIII CATG 4 cut(s) 149, 1168, 1375, 1408
NlaIV GGNNCC 5 cut(s) 415, 480, 822, 1076, 1162
NmuCI GTSAC 3 cut(s) 27, 383, 969
PaeR7I CTCGAG 1 cut(s) 318
PciSI GCTCTTC 1 cut(s) 1090
PfeI GAWTC 3 cut(s) 139, 314, 1082
PkrI GCNGC 3 cut(s) 511, 1130, 1213
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
PsiI TTATAA 2 cut(s) 605, 650
Psp6I CCWGG 7 cut(s) 180, 549, 655, 729, 771, 1030, 1288
PspEI GGTNACC 1 cut(s) 659
PspGI CCWGG 7 cut(s) 180, 549, 655, 729, 771, 1030, 1288
PspN4I GGNNCC 5 cut(s) 415, 480, 822, 1076, 1162
PspPI GGNCC 2 cut(s) 821, 1006
PstI CTGCAG 1 cut(s) 1133
PsuI RGATCY 2 cut(s) 435, 1074
PvuII CAGCTG 3 cut(s) 509, 1128, 1349
RsaI GTAC 2 cut(s) 494, 1169
RsaNI GTAC 2 cut(s) 493, 1168
SapI GCTCTTC 1 cut(s) 1090
SaqAI TTAA 4 cut(s) 440, 695, 1106, 1122
SatI GCNGC 3 cut(s) 510, 1129, 1212
Sau3AI GATC 4 cut(s) 117, 435, 586, 1074
Sau96I GGNCC 2 cut(s) 821, 1006
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 7 cut(s) 182, 551, 657, 731, 773, 1032, 1290
SduI GDGCHC 1 cut(s) 1102
SexAI ACCWGGT 1 cut(s) 729
SfaNI GCATC 2 cut(s) 241, 971
SfcI CTRYAG 1 cut(s) 1129
Sfr274I CTCGAG 1 cut(s) 318
SinI GGWCC 1 cut(s) 821
SlaI CTCGAG 1 cut(s) 318
SmlI CTYRAG 3 cut(s) 318, 1253, 1327
SmoI CTYRAG 3 cut(s) 318, 1253, 1327
Sse9I AATT 5 cut(s) 255, 333, 624, 691, 1147
SsiI CCGC 1 cut(s) 1212
SspI AATATT 2 cut(s) 925, 999
SspMI CTAG 1 cut(s) 299
StyD4I CCNGG 7 cut(s) 180, 549, 655, 729, 771, 1030, 1288
TaaI ACNGT 8 cut(s) 311, 492, 631, 865, 1104, 1250, 1285, 1379
TaiI ACGT 3 cut(s) 45, 370, 1140
TaqI TCGA 3 cut(s) 85, 319, 576
TasI AATT 5 cut(s) 255, 333, 624, 691, 1147
TatI WGTACW 1 cut(s) 1167
TauI GCSGC 1 cut(s) 1214
TfiI GAWTC 3 cut(s) 139, 314, 1082
Tru1I TTAA 4 cut(s) 440, 695, 1106, 1122
Tru9I TTAA 4 cut(s) 440, 695, 1106, 1122
TscAI CASTG 7 cut(s) 36, 316, 412, 680, 868, 972, 1288
TseFI GTSAC 3 cut(s) 27, 383, 969
TseI GCWGC 2 cut(s) 509, 1128
Tsp45I GTSAC 3 cut(s) 27, 383, 969
TspDTI ATGAA 6 cut(s) 346, 762, 817, 1032, 1393, 1431
TspGWI ACGGA 1 cut(s) 443
TspRI CASTG 7 cut(s) 36, 316, 412, 680, 868, 972, 1288
VpaK11BI GGWCC 1 cut(s) 821
XagI CCTNNNNNAGG 1 cut(s) 1293
XhoI CTCGAG 1 cut(s) 318
XmiI GTMKAC 1 cut(s) 768
XspI CTAG 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.