Rorug01G0123100

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000598
Physical Location & Seq
Forward (+)
21272615 .. 21282149
9535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0123100.1

Sequence Viewer

Length: 1359 bp
ATGGAGCCAGTAGTAGTGGCAACAGAGGAAGATGAAGCCAACAATATTCCAAAGAAACTTGATGCTGGAGCTCTATTTGTGCTCAAATCCAGAGGGTCATGGTTGCACTGTGGATATCACTTGACAACTTCAATTGTAGCTCCTGCACTCTTGAGTCTTCCCTATGCACTTTCCCTGATGGGTTGGTTTGCCGGCGTTATATGCCTGACTGTTTCAGCTCTGGTAACTTTCTATTCCTACAACCTTCTGTCCTTGATTTTAGAGCACCATGCTCACCTTGGTCAGCGCCAGCTTCGCTTCCGCGACATGGCCAGGGATATTTTGGGACCAAGATGGGGAAGATATTTTGTAGGTCCAATTCAATTTGGCCTATGCTATGGTGCAGTTATAGCTTGCATTCTTTTAGGAGGACAGAGCCTTAAGTACATATTTCTGCTCTCTAGTTCAAGGCCAGAGACCATGAAACTCTACCAATTCGTTATTATATTTGGTGTCCTAATGCTAGTGTTGGCACAAATTCCATCATTCCACTCCTTAAGGCATCTCAACCTTGTCTCTCTGGTCCTTTCTCTTGCCTATAGCGCCTGTGCCACAGCCGGTTCCATATACATTGGAAATTCCATGAATGCTCCTGGGAAGGACTATTCCTTAAATGGAAGCAAACAGAATCGCATTTTTGGATCCTTCAATGCTATTTCAATCATTGCTACCACGTACGGAAATGGCATTATTCCTGAAATACAGGCTACTATAGCACCGCCAGTCAAAGGAAAAATGTTAAAGGGATTATGTGTATGTTATGCTGTTGTCCTTTCAACATTTTTCAGTGTTGCTATATCGGGATATTGGGCATTTGGTAATCAGGCCAAAGGTACAATTTTACTCAACTTTCTAGTTGATGAGAAGCCTCTGTTGCCGACTTGGGTTCTCTTGATGACTAATGTCTTCACCTTCTTGCAAGTAGCAGCTGTTAGTGTGGTTTACTTGCAACCAACAAATGAAGTGCTCGAACGCAAGTTTGTCAATGCCAAGATTGATCAGTTCTCTGTTCGAAATGTAGTGCCAAGGTTGGTTTATCGATCATTGTCTGTCGTGATAGCCACAACAGTTGCAGCTATGTTTCCTTTCTTTGGAGACATCAACGCTCTAATCGGAGCATTTGGTTGTATTCCTCTCGACTTCATTTTGCCAATGGTGTTGTACAATGTTGTATTCAAACCATCCAAGTACAGCCTTCTTTTCTGGGGAAACACAATAATTGCTTCAACCTTTTCAGCATTAGGAGTCTTAGGGGCAATATCTTCAATCCGTCAAATAATTCTTGATGCCAACACGTTTAGTTTGTTTGCTAACGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

452

Amino Acids

49.48

Weight (kDa)

9.23

Isoelectric Point (pI)

27.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 31 - 440 5.4e-70 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000598)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09620
fragaria_vesca FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_3g34581 FvH4_4g33720 FvH4_4g33720
malus_domestica MD08G1244600.v1.1 MD15G1439400.v1.1
prunus_persica Prupe.1G582000_v2.0.a1 Prupe.2G015100_v2.0.a1 Prupe.2G123100_v2.0.a1
pyrus_communis pycom08g21210 pycom08g21220 pycom15g38730
rosa_chinensis RchiOBHm_Chr1g0336121 RchiOBHm_Chr1g0353811 RchiOBHm_Chr1g0373331 RchiOBHm_Chr4g0443191 RchiOBHm_Chr4g0443201 RchiOBHm_Chr4g0443211
rosa_laevigata RLG00000003122 RLG00000005948 RLG00000026826 RLG00000028251 RLG00000028252 RLG00000028253 RLG00000029377
rosa_multiflora Rmu_co8002498.1_g000001 Rmu_co8262279.1_g000001 Rmu_co8314139.1_g000001 Rmu_co8393711.1_g000001 Rmu_co8419167.1_g000001 Rmu_sc0007968.1_g000004 Rmu_sc0018919.1_g000004 Rmu_sc0027447.1_g000001
rosa_roxburghii Rroxscaffold_4G00284260 Rroxscaffold_4G00301490 Rroxscaffold_4G00315860 Rroxscaffold_5G00383790 Rroxscaffold_5G00383800
rosa_rugosa Rorug01G0123100 Rorug01G0238700 Rorug01G0377100 Rorug01G0377100 Rorug01G0377200 Rorug01G0377300 Rorug04G0344700 Rorug05G0347900.1
rosa_samantha Rh1AG143800 Rh1AG250300 Rh1AG386300 Rh1BG113400 Rh1BG220800 Rh1BG220900 Rh1BG350400 Rh1CG135500 Rh1CG233100 Rh1CG363500 Rh1DG150200 Rh1DG247700 Rh1DG247800 Rh1DG381300 Rh4AG399400 Rh4AG399500 Rh4BG411000 Rh4BG411100 Rh4BG411200 Rh4CG426500 Rh4CG426600 Rh4DG406100 Rh4DG406200 Rh4DG406300
rosa_wichuraiana Rw0G015190 Rw1G021850 Rw1G034870 Rw4G034440 Rw4G034450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 303
AciI CCGC 2 cut(s) 301, 758
AclWI GGATC 2 cut(s) 675, 688
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 2 cut(s) 516, 616
AfaI GTAC 5 cut(s) 425, 716, 874, 1202, 1229
AfiI CCNNNNNNNGG 4 cut(s) 307, 335, 767, 1130
AflII CTTAAG 2 cut(s) 419, 535
AflIII ACRYGT 1 cut(s) 1332
AgsI TTSAA 9 cut(s) 132, 362, 447, 688, 699, 816, 1216, 1266, 1305
AjnI CCWGG 2 cut(s) 311, 631
AluBI AGCT 7 cut(s) 71, 140, 218, 292, 392, 968, 1115
AluI AGCT 7 cut(s) 71, 140, 218, 292, 392, 968, 1115
Alw21I GWGCWC 4 cut(s) 73, 84, 267, 1008
Alw26I GTCTC 3 cut(s) 449, 559, 1128
AlwI GGATC 2 cut(s) 675, 688
AoxI GGCC 4 cut(s) 309, 367, 449, 864
ApeKI GCWGC 2 cut(s) 965, 1112
ApoI RAATTY 2 cut(s) 516, 616
AspLEI GCGC 2 cut(s) 288, 584
AspS9I GGNCC 3 cut(s) 326, 353, 562
AsuHPI GGTGA 2 cut(s) 266, 940
AsuII TTCGAA 1 cut(s) 1051
AvaII GGWCC 3 cut(s) 326, 353, 562
BalI TGGCCA 1 cut(s) 311
BamHI GGATCC 1 cut(s) 680
BanII GRGCYC 1 cut(s) 73
BbsI GAAGAC 2 cut(s) 149, 937
Bbv12I GWGCWC 4 cut(s) 73, 84, 267, 1008
BbvI GCAGC 2 cut(s) 977, 1124
BccI CCATC 4 cut(s) 172, 327, 529, 1228
BciT130I CCWGG 2 cut(s) 313, 633
BclI TGATCA 1 cut(s) 1036
BcoDI GTCTC 3 cut(s) 449, 559, 1128
BfaI CTAG 3 cut(s) 441, 503, 893
BfmI CTRYAG 2 cut(s) 577, 750
BfoI RGCGCY 2 cut(s) 289, 585
BfrI CTTAAG 2 cut(s) 419, 535
BisI GCNGC 2 cut(s) 966, 1113
BlsI GCNGC 2 cut(s) 967, 1114
Bme1390I CCNGG 2 cut(s) 313, 633
Bme18I GGWCC 3 cut(s) 326, 353, 562
BmgT120I GGNCC 3 cut(s) 326, 353, 562
BmiI GGNNCC 4 cut(s) 6, 327, 601, 682
BmrFI CCNGG 2 cut(s) 313, 633
BmsI GCATC 3 cut(s) 52, 550, 1315
BoxI GACNNNNGTC 1 cut(s) 941
BpiI GAAGAC 2 cut(s) 149, 937
BpmI CTGGAG 1 cut(s) 87
Bpu14I TTCGAA 1 cut(s) 1051
BpuEI CTTGAG 1 cut(s) 172
Bsa29I ATCGAT 1 cut(s) 1078
BsaAI YACGTR 1 cut(s) 714
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 4 cut(s) 277, 312, 632, 1064
Bsc4I CCNNNNNNNGG 4 cut(s) 307, 335, 767, 1130
Bse118I RCCGGY 2 cut(s) 191, 596
Bse1I ACTGG 2 cut(s) 8, 761
Bse3DI GCAATG 1 cut(s) 702
BseBI CCWGG 2 cut(s) 313, 633
BseCI ATCGAT 1 cut(s) 1078
BseDI CCNNGG 4 cut(s) 277, 312, 632, 1064
BseGI GGATG 1 cut(s) 1220
BseLI CCNNNNNNNGG 4 cut(s) 307, 335, 767, 1130
BseMI GCAATG 1 cut(s) 702
BseNI ACTGG 2 cut(s) 8, 761
BseXI GCAGC 2 cut(s) 977, 1124
BsgI GTGCAG 2 cut(s) 129, 402
Bsh1236I CGCG 1 cut(s) 303
BshFI GGCC 4 cut(s) 311, 369, 451, 866
BshVI ATCGAT 1 cut(s) 1078
BsiHKAI GWGCWC 4 cut(s) 73, 84, 267, 1008
BsiSI CCGG 2 cut(s) 192, 597
BsiWI CGTACG 1 cut(s) 714
BslFI GGGAC 1 cut(s) 339
BslI CCNNNNNNNGG 4 cut(s) 307, 335, 767, 1130
BsmAI GTCTC 3 cut(s) 449, 559, 1128
BsmFI GGGAC 1 cut(s) 339
BsmI GAATGC 2 cut(s) 396, 631
BsnI GGCC 4 cut(s) 311, 369, 451, 866
Bso31I GGTCTC 1 cut(s) 449
Bsp119I TTCGAA 1 cut(s) 1051
Bsp1286I GDGCHC 4 cut(s) 73, 84, 267, 1008
Bsp1407I TGTACA 1 cut(s) 1200
Bsp143I GATC 3 cut(s) 680, 1036, 1079
BspACI CCGC 2 cut(s) 301, 758
BspANI GGCC 4 cut(s) 311, 369, 451, 866
BspDI ATCGAT 1 cut(s) 1078
BspFNI CGCG 1 cut(s) 303
BspLI GGNNCC 4 cut(s) 6, 327, 601, 682
BspPI GGATC 2 cut(s) 675, 688
BspT104I TTCGAA 1 cut(s) 1051
BspTI CTTAAG 2 cut(s) 419, 535
BspTNI GGTCTC 1 cut(s) 449
BsrDI GCAATG 1 cut(s) 702
BsrFI RCCGGY 2 cut(s) 191, 596
BsrGI TGTACA 1 cut(s) 1200
BsrI ACTGG 2 cut(s) 8, 761
BssAI RCCGGY 2 cut(s) 191, 596
BssECI CCNNGG 4 cut(s) 277, 312, 632, 1064
BssMI GATC 3 cut(s) 680, 1036, 1079
BssT1I CCWWGG 2 cut(s) 277, 1064
Bst2UI CCWGG 2 cut(s) 313, 633
Bst4CI ACNGT 3 cut(s) 110, 211, 1108
BstAFI CTTAAG 2 cut(s) 419, 535
BstAUI TGTACA 1 cut(s) 1200
BstBAI YACGTR 1 cut(s) 714
BstBI TTCGAA 1 cut(s) 1051
BstC8I GCNNGC 3 cut(s) 193, 290, 394
BstDEI CTNAG 1 cut(s) 1288
BstF5I GGATG 1 cut(s) 1220
BstFNI CGCG 1 cut(s) 303
BstH2I RGCGCY 2 cut(s) 289, 585
BstHHI GCGC 2 cut(s) 288, 584
BstKTI GATC 3 cut(s) 683, 1039, 1082
BstMAI GTCTC 3 cut(s) 449, 559, 1128
BstMBI GATC 3 cut(s) 680, 1036, 1079
BstMWI GCNNNNNNNGC 6 cut(s) 201, 294, 389, 581, 752, 913
BstNI CCWGG 2 cut(s) 313, 633
BstPAI GACNNNNGTC 1 cut(s) 941
BstSCI CCNGG 2 cut(s) 311, 631
BstSFI CTRYAG 2 cut(s) 577, 750
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 2 cut(s) 977, 1124
BstV2I GAAGAC 2 cut(s) 149, 937
BstX2I RGATCY 1 cut(s) 680
BstYI RGATCY 1 cut(s) 680
Bsu15I ATCGAT 1 cut(s) 1078
BsuRI GGCC 4 cut(s) 311, 369, 451, 866
BsuTUI ATCGAT 1 cut(s) 1078
BtsCI GGATG 1 cut(s) 1220
BtsIMutI CAGTG 2 cut(s) 106, 832
Cac8I GCNNGC 3 cut(s) 193, 290, 394
CfoI GCGC 2 cut(s) 288, 584
Cfr10I RCCGGY 2 cut(s) 191, 596
Cfr13I GGNCC 3 cut(s) 326, 353, 562
ClaI ATCGAT 1 cut(s) 1078
Csp6I GTAC 5 cut(s) 424, 715, 873, 1201, 1228
CspCI CAANNNNNGTGG 2 cut(s) 1090, 1125
CviAII CATG 5 cut(s) 99, 269, 307, 460, 622
CviQI GTAC 5 cut(s) 424, 715, 873, 1201, 1228
DdeI CTNAG 1 cut(s) 1288
DpnI GATC 3 cut(s) 682, 1038, 1081
DpnII GATC 3 cut(s) 680, 1036, 1079
EaeI YGGCCR 1 cut(s) 309
Ecl136II GAGCTC 1 cut(s) 71
Eco130I CCWWGG 2 cut(s) 277, 1064
Eco24I GRGCYC 1 cut(s) 73
Eco31I GGTCTC 1 cut(s) 449
Eco32I GATATC 1 cut(s) 116
Eco47I GGWCC 3 cut(s) 326, 353, 562
Eco53kI GAGCTC 1 cut(s) 71
EcoICRI GAGCTC 1 cut(s) 71
EcoRII CCWGG 2 cut(s) 311, 631
EcoRV GATATC 1 cut(s) 116
EcoT14I CCWWGG 2 cut(s) 277, 1064
EcoT38I GRGCYC 1 cut(s) 73
ErhI CCWWGG 2 cut(s) 277, 1064
FaeI CATG 5 cut(s) 102, 272, 310, 463, 625
FaqI GGGAC 1 cut(s) 339
FatI CATG 5 cut(s) 98, 268, 306, 459, 621
FbaI TGATCA 1 cut(s) 1036
Fnu4HI GCNGC 2 cut(s) 966, 1113
FokI GGATG 1 cut(s) 1207
FriOI GRGCYC 1 cut(s) 73
Fsp4HI GCNGC 2 cut(s) 966, 1113
FspBI CTAG 3 cut(s) 441, 503, 893
GlaI GCGC 2 cut(s) 287, 583
GluI GCNGC 2 cut(s) 966, 1113
GsuI CTGGAG 1 cut(s) 87
HaeII RGCGCY 2 cut(s) 289, 585
HaeIII GGCC 4 cut(s) 311, 369, 451, 866
HapII CCGG 2 cut(s) 192, 597
HhaI GCGC 2 cut(s) 288, 584
Hin1II CATG 5 cut(s) 102, 272, 310, 463, 625
Hin6I GCGC 2 cut(s) 286, 582
HinP1I GCGC 2 cut(s) 286, 582
HinfI GANTC 3 cut(s) 154, 667, 1284
HpaII CCGG 2 cut(s) 192, 597
HphI GGTGA 2 cut(s) 266, 940
Hpy166II GTNNAC 1 cut(s) 982
Hpy188I TCNGA 1 cut(s) 1154
Hpy188III TCNNGA 8 cut(s) 90, 151, 734, 840, 931, 1093, 1175, 1322
Hpy8I GTNNAC 1 cut(s) 982
HpyAV CCTTC 5 cut(s) 254, 631, 694, 961, 1244
HpyCH4III ACNGT 3 cut(s) 110, 211, 1108
HpyCH4IV ACGT 3 cut(s) 713, 1334, 1353
HpyCH4V TGCA 8 cut(s) 106, 146, 167, 383, 396, 958, 988, 1112
HpyF10VI GCNNNNNNNGC 6 cut(s) 201, 294, 389, 581, 752, 913
HpyF3I CTNAG 1 cut(s) 1288
HpySE526I ACGT 3 cut(s) 713, 1334, 1353
Hsp92II CATG 5 cut(s) 102, 272, 310, 463, 625
HspAI GCGC 2 cut(s) 286, 582
KroI GCCGGC 1 cut(s) 191
KroNI GCCGGC 1 cut(s) 193
Ksp22I TGATCA 1 cut(s) 1036
Kzo9I GATC 3 cut(s) 680, 1036, 1079
LmnI GCTCC 5 cut(s) 4, 68, 145, 634, 1154
Lsp1109I GCAGC 2 cut(s) 977, 1124
LweI GCATC 3 cut(s) 52, 550, 1315
MaeI CTAG 3 cut(s) 441, 503, 893
MaeII ACGT 3 cut(s) 713, 1334, 1353
MaeIII GTNAC 1 cut(s) 223
MalI GATC 3 cut(s) 682, 1038, 1081
MboI GATC 3 cut(s) 680, 1036, 1079
MboII GAAGA 5 cut(s) 41, 149, 351, 937, 1293
MfeI CAATTG 1 cut(s) 132
MflI RGATCY 1 cut(s) 680
MhlI GDGCHC 4 cut(s) 73, 84, 267, 1008
MlsI TGGCCA 1 cut(s) 311
MluCI AATT 9 cut(s) 132, 357, 362, 473, 516, 616, 876, 1257, 1317
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 2 cut(s) 163, 1293
MnlI CCTC 5 cut(s) 19, 86, 401, 918, 1182
Mox20I TGGCCA 1 cut(s) 311
MroNI GCCGGC 1 cut(s) 191
MscI TGGCCA 1 cut(s) 311
MseI TTAA 4 cut(s) 420, 536, 650, 779
Msp20I TGGCCA 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 968
MspCI CTTAAG 2 cut(s) 419, 535
MspI CCGG 2 cut(s) 192, 597
MspR9I CCNGG 2 cut(s) 313, 633
MunI CAATTG 1 cut(s) 132
Mva1269I GAATGC 2 cut(s) 396, 631
MvaI CCWGG 2 cut(s) 313, 633
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 6 cut(s) 201, 294, 389, 581, 752, 913
NaeI GCCGGC 1 cut(s) 193
NdeII GATC 3 cut(s) 680, 1036, 1079
NgoMIV GCCGGC 1 cut(s) 191
NlaIII CATG 5 cut(s) 102, 272, 310, 463, 625
NlaIV GGNNCC 4 cut(s) 6, 327, 601, 682
NspV TTCGAA 1 cut(s) 1051
PctI GAATGC 2 cut(s) 396, 631
PdiI GCCGGC 1 cut(s) 193
PfeI GAWTC 1 cut(s) 667
Pfl23II CGTACG 1 cut(s) 714
PkrI GCNGC 2 cut(s) 967, 1114
PleI GAGTC 2 cut(s) 162, 1292
PpsI GAGTC 2 cut(s) 162, 1292
Ppu21I YACGTR 1 cut(s) 714
PshAI GACNNNNGTC 1 cut(s) 941
Psp124BI GAGCTC 1 cut(s) 73
Psp6I CCWGG 2 cut(s) 311, 631
PspGI CCWGG 2 cut(s) 311, 631
PspLI CGTACG 1 cut(s) 714
PspN4I GGNNCC 4 cut(s) 6, 327, 601, 682
PspPI GGNCC 3 cut(s) 326, 353, 562
PsuI RGATCY 1 cut(s) 680
PvuII CAGCTG 1 cut(s) 968
RsaI GTAC 5 cut(s) 425, 716, 874, 1202, 1229
RsaNI GTAC 5 cut(s) 424, 715, 873, 1201, 1228
SacI GAGCTC 1 cut(s) 73
SaqAI TTAA 4 cut(s) 420, 536, 650, 779
SatI GCNGC 2 cut(s) 966, 1113
Sau3AI GATC 3 cut(s) 680, 1036, 1079
Sau96I GGNCC 3 cut(s) 326, 353, 562
SchI GAGTC 2 cut(s) 163, 1293
ScrFI CCNGG 2 cut(s) 313, 633
SduI GDGCHC 4 cut(s) 73, 84, 267, 1008
SfaNI GCATC 3 cut(s) 52, 550, 1315
SfcI CTRYAG 2 cut(s) 577, 750
SfuI TTCGAA 1 cut(s) 1051
SinI GGWCC 3 cut(s) 326, 353, 562
SmlI CTYRAG 3 cut(s) 151, 419, 535
SmoI CTYRAG 3 cut(s) 151, 419, 535
Sse9I AATT 9 cut(s) 132, 357, 362, 473, 516, 616, 876, 1257, 1317
SsiI CCGC 2 cut(s) 301, 758
SspI AATATT 1 cut(s) 46
SspMI CTAG 3 cut(s) 441, 503, 893
SstI GAGCTC 1 cut(s) 73
StyD4I CCNGG 2 cut(s) 311, 631
StyI CCWWGG 2 cut(s) 277, 1064
TaaI ACNGT 3 cut(s) 110, 211, 1108
TaiI ACGT 3 cut(s) 716, 1337, 1356
TaqI TCGA 4 cut(s) 1008, 1051, 1078, 1176
TasI AATT 9 cut(s) 132, 357, 362, 473, 516, 616, 876, 1257, 1317
TatI WGTACW 3 cut(s) 423, 1200, 1227
TfiI GAWTC 1 cut(s) 667
Tru1I TTAA 4 cut(s) 420, 536, 650, 779
Tru9I TTAA 4 cut(s) 420, 536, 650, 779
TscAI CASTG 2 cut(s) 113, 832
TseI GCWGC 2 cut(s) 965, 1112
TspDTI ATGAA 5 cut(s) 48, 476, 638, 1014, 1171
TspGWI ACGGA 2 cut(s) 732, 1298
TspRI CASTG 2 cut(s) 113, 832
Vha464I CTTAAG 2 cut(s) 419, 535
VpaK11BI GGWCC 3 cut(s) 326, 353, 562
XapI RAATTY 2 cut(s) 516, 616
XcmI CCANNNNNNNNNTGG 2 cut(s) 275, 319
XspI CTAG 3 cut(s) 441, 503, 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.