Rh1DG247700

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000598
Physical Location & Seq
Reverse (-)
46230683 .. 46231732
1050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG247700.1

Sequence Viewer

Length: 1050 bp
ATGGCTTATTACACCATTGCTCATTTTTTACACAATGGAGATATGTATGGTGCCTGCAGGTCAGAATTTAAACCTGCGCAAATGACTGACGACGTCTGGGATTTTATTTTCTGTGATGGCCCATATCCCAAGTCATCTGACATCTCATCATCAATTCTTAAGAAAATGAAGAAAGAGTTTGAATATTGGTATCCTTTTGATCTACGAGTGTCAGGCAAGGATTTGATCCAAAACCATCTAGCCTTCTGCATATACAACCACACAGCTATTATGACGTCCAACAAGTACTGGCCTCGTGGGTTCAGATGTAATGGGCACCTCTTGCTAAATGGTGAGAAGATGTCCAAGTCTACAGGGAACTTTAGGACCCTTCGCCAGGCAATTGAGGAATTTTCTGCTGATGCCACTCGGTTCTCTTTGGCTGATGCTGGAGATGGTGTGGAAAATGCAAATTTTGTATTTGAGACTGCCAATGCTGCAATCTTGCGGCTCACTAAAGAGATTGCATGGATTGAACAAATTTTGGCTTCAGACTCTTGTTTGAGAACAGGTCCCCCATCTACTTATGCTGACAGGGTCTTTGCTAATGAGATAAACATTGCTGTACACAAGACTGAGCTGAATTACCGAGATTACATGTTCCGAGAAGCCCTCAAGACTGGGTTTTATGACCTTCAAGCAGCCAGGGATGAGTACAAGTTTTCGTGCGGTGCTGGGGGCATGAACCGTGATTTGGTATGGCGTTTTGTGGATGTGCAGACGCGTCTTATTACTCCAATCTGCCCACACTATGCAGAATATGTGTGGAGGGAACTTTTGAAAAAGGAAGGGTTTGTGGTAAATGCAGGATGGCCTGTTGCTGATGCTTCAGACTTAACCCTCCAGAGTGCCAATAAGTATCTGCAAGACTTCATTGTTTTAATGAGGAAGCTTTTTCACAAGCAAGTTTCAGGTTCAAATAAAGGCCATAAGGGTACTCCAGTTACATTGGTCACCGGAGAGAACAAGCTAACTGGCTTGGTATATGTTAATGAGCATTTTCGTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

349

Amino Acids

39.89

Weight (kDa)

7.62

Isoelectric Point (pI)

41.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 31 - 149 8.2e-08 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g PF09334 56 - 157 4.5e-09 tRNA synthetases class I (M)
tRNA-synt_1e PF01406 64 - 141 1.1e-07 tRNA synthetases class I (C) catalytic domain
Anticodon_1 PF08264 191 - 311 5.4e-14 Anticodon-binding domain of tRNA ligase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000598)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09620
fragaria_vesca FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_3g34581 FvH4_4g33720 FvH4_4g33720
malus_domestica MD08G1244600.v1.1 MD15G1439400.v1.1
prunus_persica Prupe.1G582000_v2.0.a1 Prupe.2G015100_v2.0.a1 Prupe.2G123100_v2.0.a1
pyrus_communis pycom08g21210 pycom08g21220 pycom15g38730
rosa_chinensis RchiOBHm_Chr1g0336121 RchiOBHm_Chr1g0353811 RchiOBHm_Chr1g0373331 RchiOBHm_Chr4g0443191 RchiOBHm_Chr4g0443201 RchiOBHm_Chr4g0443211
rosa_laevigata RLG00000003122 RLG00000005948 RLG00000026826 RLG00000028251 RLG00000028252 RLG00000028253 RLG00000029377
rosa_multiflora Rmu_co8002498.1_g000001 Rmu_co8262279.1_g000001 Rmu_co8314139.1_g000001 Rmu_co8393711.1_g000001 Rmu_co8419167.1_g000001 Rmu_sc0007968.1_g000004 Rmu_sc0018919.1_g000004 Rmu_sc0027447.1_g000001
rosa_roxburghii Rroxscaffold_4G00284260 Rroxscaffold_4G00301490 Rroxscaffold_4G00315860 Rroxscaffold_5G00383790 Rroxscaffold_5G00383800
rosa_rugosa Rorug01G0123100 Rorug01G0238700 Rorug01G0377100 Rorug01G0377100 Rorug01G0377200 Rorug01G0377300 Rorug04G0344700 Rorug05G0347900.1
rosa_samantha Rh1AG143800 Rh1AG250300 Rh1AG386300 Rh1BG113400 Rh1BG220800 Rh1BG220900 Rh1BG350400 Rh1CG135500 Rh1CG233100 Rh1CG363500 Rh1DG150200 Rh1DG247700 Rh1DG247800 Rh1DG381300 Rh4AG399400 Rh4AG399500 Rh4BG411000 Rh4BG411100 Rh4BG411200 Rh4CG426500 Rh4CG426600 Rh4DG406100 Rh4DG406200 Rh4DG406300
rosa_wichuraiana Rw0G015190 Rw1G021850 Rw1G034870 Rw4G034440 Rw4G034450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 96, 278
Acc16I TGCGCA 1 cut(s) 78
Acc36I ACCTGC 2 cut(s) 48, 82
AccB1I GGYRCC 2 cut(s) 50, 315
AccI GTMKAC 1 cut(s) 350
AccII CGCG 1 cut(s) 763
AciI CCGC 2 cut(s) 487, 708
AclWI GGATC 1 cut(s) 220
AcsI RAATTY 4 cut(s) 65, 389, 451, 519
AcuI CTGAAG 2 cut(s) 513, 852
AcyI GRCGYC 2 cut(s) 93, 275
AfaI GTAC 4 cut(s) 287, 606, 695, 976
AfiI CCNNNNNNNGG 2 cut(s) 376, 733
AflII CTTAAG 1 cut(s) 158
AflIII ACRYGT 2 cut(s) 636, 761
AgsI TTSAA 5 cut(s) 182, 515, 677, 820, 957
AjnI CCWGG 2 cut(s) 375, 683
AjuI GAANNNNNNNTTGG 2 cut(s) 716, 748
AluBI AGCT 4 cut(s) 266, 619, 931, 1009
AluI AGCT 4 cut(s) 266, 619, 931, 1009
Alw26I GTCTC 1 cut(s) 458
AlwI GGATC 1 cut(s) 220
AoxI GGCC 4 cut(s) 118, 290, 851, 964
ApeKI GCWGC 2 cut(s) 476, 680
ApoI RAATTY 4 cut(s) 65, 389, 451, 519
ArsI GACNNNNNNTTYG 2 cut(s) 563, 595
AspLEI GCGC 1 cut(s) 79
AspS9I GGNCC 3 cut(s) 119, 366, 551
AsuHPI GGTGA 2 cut(s) 344, 985
AvaII GGWCC 2 cut(s) 366, 551
BaeGI GKGCMC 1 cut(s) 318
BaeI ACNNNNGTAYC 2 cut(s) 966, 999
BanI GGYRCC 2 cut(s) 50, 315
BauI CACGAG 1 cut(s) 294
BbvI GCAGC 2 cut(s) 463, 692
BccI CCATC 5 cut(s) 110, 243, 428, 565, 843
BciT130I CCWGG 2 cut(s) 377, 685
BciVI GTATCC 1 cut(s) 201
BcoDI GTCTC 1 cut(s) 458
BfaI CTAG 1 cut(s) 239
BfmI CTRYAG 2 cut(s) 55, 351
BfrI CTTAAG 1 cut(s) 158
BfuAI ACCTGC 2 cut(s) 48, 82
BfuI GTATCC 1 cut(s) 201
BisI GCNGC 3 cut(s) 477, 488, 681
BlsI GCNGC 3 cut(s) 478, 489, 682
BmcAI AGTACT 1 cut(s) 287
Bme1390I CCNGG 2 cut(s) 377, 685
Bme18I GGWCC 2 cut(s) 366, 551
BmgT120I GGNCC 3 cut(s) 119, 366, 551
BmiI GGNNCC 4 cut(s) 52, 317, 368, 553
BmrFI CCNGG 2 cut(s) 377, 685
BmrI ACTGGG 1 cut(s) 669
BmsI GCATC 3 cut(s) 391, 415, 853
BmuI ACTGGG 1 cut(s) 669
BplI GAGNNNNNCTC 2 cut(s) 636, 668
BpmI CTGGAG 3 cut(s) 450, 866, 963
BpuEI CTTGAG 1 cut(s) 638
BsaHI GRCGYC 2 cut(s) 93, 275
BsaJI CCNNGG 1 cut(s) 684
BsaWI WCCGGW 1 cut(s) 995
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bsc4I CCNNNNNNNGG 2 cut(s) 376, 733
Bse1I ACTGG 4 cut(s) 293, 664, 980, 1018
Bse3DI GCAATG 2 cut(s) 15, 597
BseBI CCWGG 2 cut(s) 377, 685
BseDI CCNNGG 1 cut(s) 684
BseGI GGATG 3 cut(s) 694, 757, 854
BseLI CCNNNNNNNGG 2 cut(s) 376, 733
BseMI GCAATG 2 cut(s) 15, 597
BseMII CTCAG 1 cut(s) 606
BseNI ACTGG 4 cut(s) 293, 664, 980, 1018
BseSI GKGCMC 1 cut(s) 318
BseXI GCAGC 2 cut(s) 463, 692
BseYI CCCAGC 1 cut(s) 713
BsgI GTGCAG 1 cut(s) 776
Bsh1236I CGCG 1 cut(s) 763
BshFI GGCC 4 cut(s) 120, 292, 853, 966
BshNI GGYRCC 2 cut(s) 50, 315
BsiSI CCGG 1 cut(s) 996
BslFI GGGAC 1 cut(s) 537
BslI CCNNNNNNNGG 2 cut(s) 376, 733
BsmAI GTCTC 1 cut(s) 458
BsmFI GGGAC 1 cut(s) 537
BsnI GGCC 4 cut(s) 120, 292, 853, 966
Bsp1286I GDGCHC 1 cut(s) 318
Bsp1407I TGTACA 1 cut(s) 604
Bsp143I GATC 2 cut(s) 199, 225
BspACI CCGC 2 cut(s) 487, 708
BspANI GGCC 4 cut(s) 120, 292, 853, 966
BspCNI CTCAG 1 cut(s) 607
BspFNI CGCG 1 cut(s) 763
BspLI GGNNCC 4 cut(s) 52, 317, 368, 553
BspMAI CTGCAG 1 cut(s) 59
BspMI ACCTGC 2 cut(s) 48, 82
BspPI GGATC 1 cut(s) 220
BspT107I GGYRCC 2 cut(s) 50, 315
BspTI CTTAAG 1 cut(s) 158
BsrDI GCAATG 2 cut(s) 15, 597
BsrGI TGTACA 1 cut(s) 604
BsrI ACTGG 4 cut(s) 293, 664, 980, 1018
BssECI CCNNGG 1 cut(s) 684
BssMI GATC 2 cut(s) 199, 225
BssNI GRCGYC 2 cut(s) 93, 275
BssSI CACGAG 1 cut(s) 294
Bst2BI CACGAG 1 cut(s) 294
Bst2UI CCWGG 2 cut(s) 377, 685
Bst4CI ACNGT 1 cut(s) 728
BstACI GRCGYC 2 cut(s) 93, 275
BstAFI CTTAAG 1 cut(s) 158
BstAPI GCANNNNNTGC 1 cut(s) 322
BstAUI TGTACA 1 cut(s) 604
BstC8I GCNNGC 1 cut(s) 55
BstDEI CTNAG 1 cut(s) 615
BstEII GGTNACC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 374
BstF5I GGATG 3 cut(s) 694, 757, 854
BstFNI CGCG 1 cut(s) 763
BstHHI GCGC 1 cut(s) 79
BstKTI GATC 2 cut(s) 202, 228
BstMAI GTCTC 1 cut(s) 458
BstMBI GATC 2 cut(s) 199, 225
BstMWI GCNNNNNNNGC 2 cut(s) 322, 476
BstNI CCWGG 2 cut(s) 377, 685
BstNSI RCATGY 1 cut(s) 640
BstPI GGTNACC 1 cut(s) 991
BstSCI CCNGG 2 cut(s) 375, 683
BstSFI CTRYAG 2 cut(s) 55, 351
BstSLI GKGCMC 1 cut(s) 318
BstUI CGCG 1 cut(s) 763
BstV1I GCAGC 2 cut(s) 463, 692
BsuI GTATCC 1 cut(s) 201
BsuRI GGCC 4 cut(s) 120, 292, 853, 966
BtsCI GGATG 3 cut(s) 694, 757, 854
BveI ACCTGC 2 cut(s) 48, 82
Cac8I GCNNGC 1 cut(s) 55
CfoI GCGC 1 cut(s) 79
Cfr13I GGNCC 3 cut(s) 119, 366, 551
CseI GACGC 2 cut(s) 752, 769
Csp6I GTAC 4 cut(s) 286, 605, 694, 975
CviAII CATG 3 cut(s) 507, 637, 721
CviQI GTAC 4 cut(s) 286, 605, 694, 975
DdeI CTNAG 1 cut(s) 615
DpnI GATC 2 cut(s) 201, 227
DpnII GATC 2 cut(s) 199, 225
DraI TTTAAA 1 cut(s) 70
Eco47I GGWCC 2 cut(s) 366, 551
Eco57I CTGAAG 2 cut(s) 513, 852
Eco91I GGTNACC 1 cut(s) 991
EcoNI CCTNNNNNAGG 1 cut(s) 374
EcoO109I RGGNCCY 2 cut(s) 366, 551
EcoO65I GGTNACC 1 cut(s) 991
EcoRII CCWGG 2 cut(s) 375, 683
FaeI CATG 3 cut(s) 510, 640, 724
FaqI GGGAC 1 cut(s) 537
FatI CATG 3 cut(s) 506, 636, 720
FblI GTMKAC 1 cut(s) 350
Fnu4HI GCNGC 3 cut(s) 477, 488, 681
FokI GGATG 3 cut(s) 701, 764, 861
Fsp4HI GCNGC 3 cut(s) 477, 488, 681
FspBI CTAG 1 cut(s) 239
FspI TGCGCA 1 cut(s) 78
GlaI GCGC 1 cut(s) 78
GluI GCNGC 3 cut(s) 477, 488, 681
GsaI CCCAGC 1 cut(s) 717
GsuI CTGGAG 3 cut(s) 450, 866, 963
HaeIII GGCC 4 cut(s) 120, 292, 853, 966
HapII CCGG 1 cut(s) 996
HgaI GACGC 2 cut(s) 752, 769
HhaI GCGC 1 cut(s) 79
Hin1I GRCGYC 2 cut(s) 93, 275
Hin1II CATG 3 cut(s) 510, 640, 724
Hin6I GCGC 1 cut(s) 77
HinP1I GCGC 1 cut(s) 77
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 1 cut(s) 533
HpaII CCGG 1 cut(s) 996
HphI GGTGA 2 cut(s) 344, 985
Hpy166II GTNNAC 2 cut(s) 351, 607
Hpy188I TCNGA 6 cut(s) 64, 139, 305, 532, 644, 871
Hpy188III TCNNGA 2 cut(s) 655, 883
Hpy8I GTNNAC 2 cut(s) 351, 607
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 4 cut(s) 253, 380, 683, 821
HpyCH4III ACNGT 1 cut(s) 728
HpyCH4IV ACGT 2 cut(s) 93, 275
HpyCH4V TGCA 9 cut(s) 57, 249, 449, 479, 506, 757, 794, 845, 904
HpyF10VI GCNNNNNNNGC 2 cut(s) 322, 476
HpyF3I CTNAG 1 cut(s) 615
HpySE526I ACGT 2 cut(s) 93, 275
Hsp92I GRCGYC 2 cut(s) 93, 275
Hsp92II CATG 3 cut(s) 510, 640, 724
HspAI GCGC 1 cut(s) 77
Kzo9I GATC 2 cut(s) 199, 225
Lsp1109I GCAGC 2 cut(s) 463, 692
LweI GCATC 3 cut(s) 391, 415, 853
MaeI CTAG 1 cut(s) 239
MaeII ACGT 2 cut(s) 93, 275
MaeIII GTNAC 2 cut(s) 982, 991
MalI GATC 2 cut(s) 201, 227
MboI GATC 2 cut(s) 199, 225
MboII GAAGA 2 cut(s) 181, 349
MfeI CAATTG 1 cut(s) 381
MhlI GDGCHC 1 cut(s) 318
MluCI AATT 7 cut(s) 65, 153, 381, 389, 451, 519, 622
MluI ACGCGT 1 cut(s) 761
MlyI GAGTC 1 cut(s) 527
MmeI TCCRAC 1 cut(s) 303
MnlI CCTC 7 cut(s) 303, 329, 379, 662, 801, 890, 918
MseI TTAA 5 cut(s) 69, 159, 875, 920, 1029
MslI CAYNNNNRTG 1 cut(s) 1041
MspCI CTTAAG 1 cut(s) 158
MspI CCGG 1 cut(s) 996
MspR9I CCNGG 2 cut(s) 377, 685
MunI CAATTG 1 cut(s) 381
MvaI CCWGG 2 cut(s) 377, 685
MvnI CGCG 1 cut(s) 763
MwoI GCNNNNNNNGC 2 cut(s) 322, 476
NdeII GATC 2 cut(s) 199, 225
NlaIII CATG 3 cut(s) 510, 640, 724
NlaIV GGNNCC 4 cut(s) 52, 317, 368, 553
NmuCI GTSAC 1 cut(s) 991
NsbI TGCGCA 1 cut(s) 78
NspI RCATGY 1 cut(s) 640
PciI ACATGT 1 cut(s) 636
PflFI GACNNNGTC 2 cut(s) 92, 575
PkrI GCNGC 3 cut(s) 478, 489, 682
PleI GAGTC 1 cut(s) 527
PpsI GAGTC 1 cut(s) 527
PpuMI RGGWCCY 2 cut(s) 366, 551
PscI ACATGT 1 cut(s) 636
Psp5II RGGWCCY 2 cut(s) 366, 551
Psp6I CCWGG 2 cut(s) 375, 683
PspEI GGTNACC 1 cut(s) 991
PspFI CCCAGC 1 cut(s) 713
PspGI CCWGG 2 cut(s) 375, 683
PspN4I GGNNCC 4 cut(s) 52, 317, 368, 553
PspPI GGNCC 3 cut(s) 119, 366, 551
PspPPI RGGWCCY 2 cut(s) 366, 551
PstI CTGCAG 1 cut(s) 59
PsyI GACNNNGTC 2 cut(s) 92, 575
RsaI GTAC 4 cut(s) 287, 606, 695, 976
RsaNI GTAC 4 cut(s) 286, 605, 694, 975
RseI CAYNNNNRTG 1 cut(s) 1041
SaqAI TTAA 5 cut(s) 69, 159, 875, 920, 1029
SatI GCNGC 3 cut(s) 477, 488, 681
Sau3AI GATC 2 cut(s) 199, 225
Sau96I GGNCC 3 cut(s) 119, 366, 551
SbfI CCTGCAGG 1 cut(s) 59
ScaI AGTACT 1 cut(s) 287
SchI GAGTC 1 cut(s) 527
ScrFI CCNGG 2 cut(s) 377, 685
SdaI CCTGCAGG 1 cut(s) 59
SduI GDGCHC 1 cut(s) 318
SfaNI GCATC 3 cut(s) 391, 415, 853
SfcI CTRYAG 2 cut(s) 55, 351
SinI GGWCC 2 cut(s) 366, 551
SmiMI CAYNNNNRTG 1 cut(s) 1041
SmlI CTYRAG 2 cut(s) 158, 653
SmoI CTYRAG 2 cut(s) 158, 653
Sse8387I CCTGCAGG 1 cut(s) 59
Sse9I AATT 7 cut(s) 65, 153, 381, 389, 451, 519, 622
SsiI CCGC 2 cut(s) 487, 708
SspI AATATT 1 cut(s) 185
SspMI CTAG 1 cut(s) 239
StyD4I CCNGG 2 cut(s) 375, 683
TaaI ACNGT 1 cut(s) 728
TaiI ACGT 2 cut(s) 96, 278
TasI AATT 7 cut(s) 65, 153, 381, 389, 451, 519, 622
TatI WGTACW 3 cut(s) 285, 604, 693
TauI GCSGC 1 cut(s) 490
Tru1I TTAA 5 cut(s) 69, 159, 875, 920, 1029
Tru9I TTAA 5 cut(s) 69, 159, 875, 920, 1029
TseFI GTSAC 1 cut(s) 991
TseI GCWGC 2 cut(s) 476, 680
Tsp45I GTSAC 1 cut(s) 991
TspDTI ATGAA 3 cut(s) 182, 737, 901
Tth111I GACNNNGTC 2 cut(s) 92, 575
Vha464I CTTAAG 1 cut(s) 158
VpaK11BI GGWCC 2 cut(s) 366, 551
XagI CCTNNNNNAGG 1 cut(s) 374
XapI RAATTY 4 cut(s) 65, 389, 451, 519
XceI RCATGY 1 cut(s) 640
XmiI GTMKAC 1 cut(s) 350
XspI CTAG 1 cut(s) 239
ZraI GACGTC 2 cut(s) 94, 276
ZrmI AGTACT 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.