Rroxscaffold_5G00383790

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000598
Physical Location & Seq
Reverse (-)
63369710 .. 63372121
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00383790.1

Sequence Viewer

Length: 1581 bp
ATGTTTCAAGAAGCCCTCATTTCTGGCTTTCTTCAACTTCAGGCTGCCAGGGACTTGTATAGAATTTCGTGTGGTCCTCATGGCATGAACCATGATTTGGTGCTGCGCTATATTGATGTGCATACACGTCTAATTGCTCCAATCTGTCCACACTATGCTGAATATGTCTGGCGGGAATATTTAAAAAAGGAGGGGTTTGTGGTAATTAAGTCAGGCTGGCCTGCCGCTGATGCCCCGGATTTGATACTCCAAAGTGCCAATAAGTATTTGCAAGATCTAATTGAACTTATGAGGGAGCTTGAAAAGAAGTTTCGAGCTTTAAATGATGGTAATTATGATGTGACAGAAGAAGAAACGAAGGCAGTTGGTTTGATATATGTTAAGGAGGAAATTGATGGATGGGAGGGCAAGTGCTTGAGGATACTTCAAGATAACTTTGACAGCGAGACAAACACCTTTTCTGCTCAGGACGAGGACATGCTAGACGCATTAATATCGTACATATATGGGGATTTTACCATTCGACAGGATATAGATTATAGGCAAACTGAACAGCTCTGTATGTCTTTTCTGAAGTTGAAGAAGGATGAAGCACTTAATTTTGGGGCTGATGCCTTAGAGTTGAAGCTACCATTTGGAGAGATTGAGGTCGTTCAAGAAAACTTGGACTTGATTAAGAGAGAAATTGGCCTTCATGAGGTTAAGGTACAAGTTTTCTCTGGTACCACCGGTCTTGAAGATTTTACACTCGATAGTCCTCCATCCCCTGGAAGGCCAGCTGCTGCCTTGGTGAGCCGTGACTTCTATGAGAAAATGGAACATTCTGCTCCAGGAGTATGGGAATTGAAACGTCGTCTTCAGTTATCAGATAAAGTTCTTACTCCCTCGTCTCGTCCTCCCTCTGAGCTATTGTACCAGAAGAAAATGGAACATCCGTTTAAGTTGTTATTCCAGGAGAAAACGGAACATTCTGACCTTGGAGAACAGGAACCGAATGATGATCAATCCCCAGATAAAATTCTTGCTCCATTATATCGTCCTCCCTATGAGCTATTGTTTCAGGGCTCGTTCAAAAAGGCAAAACGTACTGCTTCTGCCGAGGACAAATGGCTTCTCGTGAACTTGCAATCGACTAAGGAATTCAGCTCACATCTGGCGTATGATGATTCAAATGAAGTCAAGAAGATTTGCAGATTCTACAACTTGGTATATACGCCTGTAGTGCTTATCATTGACCCCATAAATGGTGAGAATATGCGTTCGTGGTATGGAATGGTTCAACCAGAACGTCTGCTGGAGGCTAGTGATCTGTTAGTACCATTTTTGGAAAATAGCCCCAAGGATCACCATCATCCAGGAGAAGAAAGTTCTCAGCCTCAGCCAGAGGAAAGTGAAGGTAAGTATATATGTTTGGACTTCTCGATATCTTCCAATGTGATGTGCATATTACATTTCCATGCAATCATTGTATTTGTACTTAAGGAATTTGTTAAATTTGATTTAGATGATTCGGTTGGTGACAAAACTGATGAAGAAGATGAGGAATTGCAGTGGGCATTGGAAGCTTCCATGAAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

526

Amino Acids

60.49

Weight (kDa)

4.79

Isoelectric Point (pI)

54.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anticodon_1 PF08264 33 - 104 3.9e-09 Anticodon-binding domain of tRNA ligase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000598)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09620
fragaria_vesca FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_3g34581 FvH4_4g33720 FvH4_4g33720
malus_domestica MD08G1244600.v1.1 MD15G1439400.v1.1
prunus_persica Prupe.1G582000_v2.0.a1 Prupe.2G015100_v2.0.a1 Prupe.2G123100_v2.0.a1
pyrus_communis pycom08g21210 pycom08g21220 pycom15g38730
rosa_chinensis RchiOBHm_Chr1g0336121 RchiOBHm_Chr1g0353811 RchiOBHm_Chr1g0373331 RchiOBHm_Chr4g0443191 RchiOBHm_Chr4g0443201 RchiOBHm_Chr4g0443211
rosa_laevigata RLG00000003122 RLG00000005948 RLG00000026826 RLG00000028251 RLG00000028252 RLG00000028253 RLG00000029377
rosa_multiflora Rmu_co8002498.1_g000001 Rmu_co8262279.1_g000001 Rmu_co8314139.1_g000001 Rmu_co8393711.1_g000001 Rmu_co8419167.1_g000001 Rmu_sc0007968.1_g000004 Rmu_sc0018919.1_g000004 Rmu_sc0027447.1_g000001
rosa_roxburghii Rroxscaffold_4G00284260 Rroxscaffold_4G00301490 Rroxscaffold_4G00315860 Rroxscaffold_5G00383790 Rroxscaffold_5G00383800
rosa_rugosa Rorug01G0123100 Rorug01G0238700 Rorug01G0377100 Rorug01G0377100 Rorug01G0377200 Rorug01G0377300 Rorug04G0344700 Rorug05G0347900.1
rosa_samantha Rh1AG143800 Rh1AG250300 Rh1AG386300 Rh1BG113400 Rh1BG220800 Rh1BG220900 Rh1BG350400 Rh1CG135500 Rh1CG233100 Rh1CG363500 Rh1DG150200 Rh1DG247700 Rh1DG247800 Rh1DG381300 Rh4AG399400 Rh4AG399500 Rh4BG411000 Rh4BG411100 Rh4BG411200 Rh4CG426500 Rh4CG426600 Rh4DG406100 Rh4DG406200 Rh4DG406300
rosa_wichuraiana Rw0G015190 Rw1G021850 Rw1G034870 Rw4G034440 Rw4G034450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 722
AccB1I GGYRCC 1 cut(s) 722
AccB7I CCANNNNNTGG 2 cut(s) 97, 767
AciI CCGC 2 cut(s) 172, 225
AclWI GGATC 1 cut(s) 1350
AcsI RAATTY 5 cut(s) 63, 1017, 1139, 1484, 1493
AcuI CTGAAG 3 cut(s) 23, 593, 842
AfaI GTAC 7 cut(s) 500, 708, 724, 914, 1087, 1317, 1476
AfiI CCNNNNNNNGG 5 cut(s) 97, 697, 767, 771, 1244
AflII CTTAAG 1 cut(s) 1478
AflIII ACRYGT 1 cut(s) 125
AgeI ACCGGT 1 cut(s) 728
AjiI CACGTC 1 cut(s) 128
AjnI CCWGG 5 cut(s) 47, 766, 829, 951, 1354
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
Alw26I GTCTC 2 cut(s) 440, 894
AlwI GGATC 1 cut(s) 1350
AlwNI CAGNNNCTG 1 cut(s) 782
AoxI GGCC 3 cut(s) 218, 688, 773
ApeKI GCWGC 4 cut(s) 44, 103, 779, 782
ApoI RAATTY 5 cut(s) 63, 1017, 1139, 1484, 1493
AseI ATTAAT 1 cut(s) 491
AsiGI ACCGGT 1 cut(s) 728
Asp718I GGTACC 1 cut(s) 722
AspLEI GCGC 1 cut(s) 108
AspS9I GGNCC 1 cut(s) 74
AsuC2I CCSGG 1 cut(s) 236
AsuHPI GGTGA 4 cut(s) 802, 1259, 1337, 1529
AvaII GGWCC 1 cut(s) 74
BanI GGYRCC 1 cut(s) 722
BanII GRGCYC 1 cut(s) 1067
BauI CACGAG 1 cut(s) 1115
BbsI GAAGAC 1 cut(s) 848
BbvCI CCTCAGC 1 cut(s) 1377
BbvI GCAGC 4 cut(s) 31, 90, 766, 769
BccI CCATC 5 cut(s) 320, 389, 393, 769, 1356
BceAI ACGGC 1 cut(s) 780
BcgI CGANNNNNNTGC 2 cut(s) 477, 511
BciT130I CCWGG 5 cut(s) 49, 768, 831, 953, 1356
BciVI GTATCC 1 cut(s) 414
BclI TGATCA 1 cut(s) 1000
BcnI CCSGG 1 cut(s) 236
BcoDI GTCTC 2 cut(s) 440, 894
BfaI CTAG 2 cut(s) 482, 1302
BfmI CTRYAG 1 cut(s) 1218
BfrI CTTAAG 1 cut(s) 1478
BfuI GTATCC 1 cut(s) 414
BglII AGATCT 1 cut(s) 274
BisI GCNGC 5 cut(s) 45, 104, 225, 780, 783
BlsI GCNGC 5 cut(s) 46, 105, 226, 781, 784
Bme1390I CCNGG 6 cut(s) 49, 236, 768, 831, 953, 1356
Bme18I GGWCC 1 cut(s) 74
BmgBI CACGTC 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 74
BmiI GGNNCC 2 cut(s) 724, 990
BmrFI CCNGG 6 cut(s) 49, 236, 768, 831, 953, 1356
BmsI GCATC 2 cut(s) 220, 601
BpiI GAAGAC 1 cut(s) 848
BpmI CTGGAG 2 cut(s) 813, 1316
Bpu10I CCTNAGC 2 cut(s) 465, 1377
BpuEI CTTGAG 1 cut(s) 436
BpuMI CCSGG 1 cut(s) 236
BsaBI GATNNNNATC 1 cut(s) 1347
BsaJI CCNNGG 7 cut(s) 48, 234, 766, 786, 976, 1098, 1338
BsaWI WCCGGW 1 cut(s) 728
BsaXI ACNNNNNCTCC 2 cut(s) 395, 425
Bsc4I CCNNNNNNNGG 5 cut(s) 97, 697, 767, 771, 1244
Bse118I RCCGGY 1 cut(s) 728
Bse8I GATNNNNATC 1 cut(s) 1347
BseBI CCWGG 5 cut(s) 49, 768, 831, 953, 1356
BseDI CCNNGG 7 cut(s) 48, 234, 766, 786, 976, 1098, 1338
BseGI GGATG 5 cut(s) 404, 592, 761, 931, 1351
BseJI GATNNNNATC 1 cut(s) 1347
BseLI CCNNNNNNNGG 5 cut(s) 97, 697, 767, 771, 1244
BseMII CTCAG 4 cut(s) 479, 894, 1385, 1391
BseXI GCAGC 4 cut(s) 31, 90, 766, 769
BshFI GGCC 3 cut(s) 220, 690, 775
BshNI GGYRCC 1 cut(s) 722
BshTI ACCGGT 1 cut(s) 728
BsiSI CCGG 2 cut(s) 236, 729
BslFI GGGAC 1 cut(s) 65
BslI CCNNNNNNNGG 5 cut(s) 97, 697, 767, 771, 1244
BsmAI GTCTC 2 cut(s) 440, 894
BsmBI CGTCTC 1 cut(s) 894
BsmFI GGGAC 1 cut(s) 65
BsnI GGCC 3 cut(s) 220, 690, 775
Bsp1286I GDGCHC 1 cut(s) 1067
Bsp143I GATC 4 cut(s) 274, 1000, 1306, 1342
BspACI CCGC 2 cut(s) 172, 225
BspANI GGCC 3 cut(s) 220, 690, 775
BspCNI CTCAG 4 cut(s) 478, 895, 1384, 1390
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 2 cut(s) 724, 990
BspPI GGATC 1 cut(s) 1350
BspT107I GGYRCC 1 cut(s) 722
BspTI CTTAAG 1 cut(s) 1478
BsrFI RCCGGY 1 cut(s) 728
BssAI RCCGGY 1 cut(s) 728
BssECI CCNNGG 7 cut(s) 48, 234, 766, 786, 976, 1098, 1338
BssMI GATC 4 cut(s) 274, 1000, 1306, 1342
BssSI CACGAG 1 cut(s) 1115
BssT1I CCWWGG 3 cut(s) 786, 976, 1338
Bst2BI CACGAG 1 cut(s) 1115
Bst2UI CCWGG 5 cut(s) 49, 768, 831, 953, 1356
BstAFI CTTAAG 1 cut(s) 1478
BstC8I GCNNGC 3 cut(s) 218, 222, 777
BstDEI CTNAG 6 cut(s) 465, 616, 903, 1134, 1371, 1377
BstENI CCTNNNNNAGG 1 cut(s) 695
BstF5I GGATG 5 cut(s) 404, 592, 761, 931, 1351
BstHHI GCGC 1 cut(s) 108
BstKTI GATC 4 cut(s) 277, 1003, 1309, 1345
BstMAI GTCTC 2 cut(s) 440, 894
BstMBI GATC 4 cut(s) 274, 1000, 1306, 1342
BstMWI GCNNNNNNNGC 3 cut(s) 230, 1222, 1562
BstNI CCWGG 5 cut(s) 49, 768, 831, 953, 1356
BstNSI RCATGY 1 cut(s) 481
BstSCI CCNGG 6 cut(s) 47, 234, 766, 829, 951, 1354
BstSFI CTRYAG 1 cut(s) 1218
BstV1I GCAGC 4 cut(s) 31, 90, 766, 769
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 1 cut(s) 274
BstXI CCANNNNNNTGG 1 cut(s) 837
BstYI RGATCY 1 cut(s) 274
BsuI GTATCC 1 cut(s) 414
BsuRI GGCC 3 cut(s) 220, 690, 775
BtrI CACGTC 1 cut(s) 128
BtsCI GGATG 5 cut(s) 404, 592, 761, 931, 1351
BtsI GCAGTG 1 cut(s) 1556
BtsIMutI CAGTG 1 cut(s) 1556
Cac8I GCNNGC 3 cut(s) 218, 222, 777
CaiI CAGNNNCTG 1 cut(s) 782
CciI TCATGA 1 cut(s) 694
CfoI GCGC 1 cut(s) 108
Cfr10I RCCGGY 1 cut(s) 728
Cfr13I GGNCC 1 cut(s) 74
CseI GACGC 1 cut(s) 494
Csp6I GTAC 7 cut(s) 499, 707, 723, 913, 1086, 1316, 1475
CspAI ACCGGT 1 cut(s) 728
CspCI CAANNNNNGTGG 2 cut(s) 715, 750
CviAII CATG 7 cut(s) 80, 85, 92, 478, 695, 1457, 1570
CviQI GTAC 7 cut(s) 499, 707, 723, 913, 1086, 1316, 1475
DdeI CTNAG 6 cut(s) 465, 616, 903, 1134, 1371, 1377
DpnI GATC 4 cut(s) 276, 1002, 1308, 1344
DpnII GATC 4 cut(s) 274, 1000, 1306, 1342
DraI TTTAAA 2 cut(s) 183, 321
Eco130I CCWWGG 3 cut(s) 786, 976, 1338
Eco24I GRGCYC 1 cut(s) 1067
Eco32I GATATC 1 cut(s) 1425
Eco47I GGWCC 1 cut(s) 74
Eco57I CTGAAG 3 cut(s) 23, 593, 842
EcoNI CCTNNNNNAGG 1 cut(s) 695
EcoRI GAATTC 1 cut(s) 1139
EcoRII CCWGG 5 cut(s) 47, 766, 829, 951, 1354
EcoRV GATATC 1 cut(s) 1425
EcoT14I CCWWGG 3 cut(s) 786, 976, 1338
EcoT38I GRGCYC 1 cut(s) 1067
ErhI CCWWGG 3 cut(s) 786, 976, 1338
Esp3I CGTCTC 1 cut(s) 894
FaeI CATG 7 cut(s) 83, 88, 95, 481, 698, 1460, 1573
FaqI GGGAC 1 cut(s) 65
FatI CATG 7 cut(s) 79, 84, 91, 477, 694, 1456, 1569
FauI CCCGC 1 cut(s) 165
FbaI TGATCA 1 cut(s) 1000
Fnu4HI GCNGC 5 cut(s) 45, 104, 225, 780, 783
FokI GGATG 5 cut(s) 411, 599, 748, 918, 1338
FriOI GRGCYC 1 cut(s) 1067
Fsp4HI GCNGC 5 cut(s) 45, 104, 225, 780, 783
FspBI CTAG 2 cut(s) 482, 1302
GlaI GCGC 1 cut(s) 107
GluI GCNGC 5 cut(s) 45, 104, 225, 780, 783
GsuI CTGGAG 2 cut(s) 813, 1316
HaeIII GGCC 3 cut(s) 220, 690, 775
HapII CCGG 2 cut(s) 236, 729
HgaI GACGC 1 cut(s) 494
HhaI GCGC 1 cut(s) 108
Hin1II CATG 7 cut(s) 83, 88, 95, 481, 698, 1460, 1573
Hin6I GCGC 1 cut(s) 106
HinP1I GCGC 1 cut(s) 106
HindIII AAGCTT 2 cut(s) 1563, 1575
HinfI GANTC 3 cut(s) 1166, 1194, 1508
HpaII CCGG 2 cut(s) 236, 729
HphI GGTGA 4 cut(s) 802, 1259, 1337, 1529
Hpy166II GTNNAC 2 cut(s) 149, 1120
Hpy188I TCNGA 4 cut(s) 573, 868, 904, 973
Hpy188III TCNNGA 9 cut(s) 8, 428, 467, 656, 695, 734, 1117, 1180, 1420
Hpy8I GTNNAC 2 cut(s) 149, 1120
Hpy99I CGWCG 1 cut(s) 855
HpyAV CCTTC 5 cut(s) 352, 577, 701, 765, 1388
HpyCH4IV ACGT 4 cut(s) 127, 850, 1084, 1288
HpyCH4V TGCA 7 cut(s) 121, 271, 1126, 1191, 1443, 1460, 1549
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 1222, 1562
HpyF3I CTNAG 6 cut(s) 465, 616, 903, 1134, 1371, 1377
HpySE526I ACGT 4 cut(s) 127, 850, 1084, 1288
Hsp92II CATG 7 cut(s) 83, 88, 95, 481, 698, 1460, 1573
HspAI GCGC 1 cut(s) 106
KpnI GGTACC 1 cut(s) 726
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 4 cut(s) 274, 1000, 1306, 1342
LmnI GCTCC 4 cut(s) 142, 295, 832, 1030
Lsp1109I GCAGC 4 cut(s) 31, 90, 766, 769
LweI GCATC 2 cut(s) 220, 601
MaeI CTAG 2 cut(s) 482, 1302
MaeII ACGT 4 cut(s) 127, 850, 1084, 1288
MaeIII GTNAC 3 cut(s) 340, 797, 1517
MalI GATC 4 cut(s) 276, 1002, 1308, 1344
MboI GATC 4 cut(s) 274, 1000, 1306, 1342
MflI RGATCY 1 cut(s) 274
MhlI GDGCHC 1 cut(s) 1067
MslI CAYNNNNRTG 1 cut(s) 1455
MspA1I CMGCKG 2 cut(s) 227, 779
MspCI CTTAAG 1 cut(s) 1478
MspI CCGG 2 cut(s) 236, 729
MspR9I CCNGG 6 cut(s) 49, 236, 768, 831, 953, 1356
MvaI CCWGG 5 cut(s) 49, 768, 831, 953, 1356
MwoI GCNNNNNNNGC 3 cut(s) 230, 1222, 1562
NciI CCSGG 1 cut(s) 236
NdeII GATC 4 cut(s) 274, 1000, 1306, 1342
NlaIII CATG 7 cut(s) 83, 88, 95, 481, 698, 1460, 1573
NlaIV GGNNCC 2 cut(s) 724, 990
NmeAIII GCCGAG 1 cut(s) 1123
NmuCI GTSAC 3 cut(s) 340, 797, 1517
NspI RCATGY 1 cut(s) 481
PagI TCATGA 1 cut(s) 694
PfeI GAWTC 3 cut(s) 1166, 1194, 1508
PflMI CCANNNNNTGG 2 cut(s) 97, 767
PfoI TCCNGGA 3 cut(s) 829, 951, 1354
PinAI ACCGGT 1 cut(s) 728
PkrI GCNGC 5 cut(s) 46, 105, 226, 781, 784
PshBI ATTAAT 1 cut(s) 491
Psp6I CCWGG 5 cut(s) 47, 766, 829, 951, 1354
PspGI CCWGG 5 cut(s) 47, 766, 829, 951, 1354
PspN4I GGNNCC 2 cut(s) 724, 990
PspPI GGNCC 1 cut(s) 74
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 274
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 7 cut(s) 500, 708, 724, 914, 1087, 1317, 1476
RsaNI GTAC 7 cut(s) 499, 707, 723, 913, 1086, 1316, 1475
RseI CAYNNNNRTG 1 cut(s) 1455
SatI GCNGC 5 cut(s) 45, 104, 225, 780, 783
Sau3AI GATC 4 cut(s) 274, 1000, 1306, 1342
Sau96I GGNCC 1 cut(s) 74
ScrFI CCNGG 6 cut(s) 49, 236, 768, 831, 953, 1356
SduI GDGCHC 1 cut(s) 1067
SfaNI GCATC 2 cut(s) 220, 601
SfcI CTRYAG 1 cut(s) 1218
SinI GGWCC 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 1455
SmlI CTYRAG 2 cut(s) 415, 1478
SmoI CTYRAG 2 cut(s) 415, 1478
SsiI CCGC 2 cut(s) 172, 225
SspI AATATT 1 cut(s) 179
SspMI CTAG 2 cut(s) 482, 1302
StyD4I CCNGG 6 cut(s) 47, 234, 766, 829, 951, 1354
StyI CCWWGG 3 cut(s) 786, 976, 1338
TaiI ACGT 4 cut(s) 130, 853, 1087, 1291
TaqI TCGA 5 cut(s) 313, 523, 750, 1130, 1421
TatI WGTACW 1 cut(s) 1474
TauI GCSGC 1 cut(s) 227
TfiI GAWTC 3 cut(s) 1166, 1194, 1508
TscAI CASTG 1 cut(s) 1556
TseFI GTSAC 3 cut(s) 340, 797, 1517
TseI GCWGC 4 cut(s) 44, 103, 779, 782
Tsp45I GTSAC 3 cut(s) 340, 797, 1517
TspDTI ATGAA 5 cut(s) 101, 603, 683, 1188, 1545
TspGWI ACGGA 2 cut(s) 924, 977
TspRI CASTG 1 cut(s) 1556
Van91I CCANNNNNTGG 2 cut(s) 97, 767
Vha464I CTTAAG 1 cut(s) 1478
VpaK11BI GGWCC 1 cut(s) 74
VspI ATTAAT 1 cut(s) 491
XagI CCTNNNNNAGG 1 cut(s) 695
XapI RAATTY 5 cut(s) 63, 1017, 1139, 1484, 1493
XceI RCATGY 1 cut(s) 481
XspI CTAG 2 cut(s) 482, 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.