Rmu_co8419167.1_g000001

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8419167.1
OG0000598
Physical Location & Seq
Reverse (-)
2 .. 1359
1358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8419167.1_g000001.1.cds

Sequence Viewer

Length: 1358 bp
atggcggaggaaggcgggaagagctttgccaggagagaccatctcctagagattgaggcaaaggctcgaagctggtgggaagacaaacaagttttcagggcccagtctcgtgcagagccgccaggcccaggggagaagttctttggaaacttccccttcccttatatgaacggttatctgcatctcggacatgccttctcactgtcgaagctggagtttgctgcagcctatcatagattgagaggcgcaaatgtcctcttgccatttgcttttcactgtactggcatgcccatcaaagcctctgccgataagcttattagggagattcaacagtttggagaacctcctgtttttcccaaacaagtggagaaagggaacgaggaagtggaagtggaagcagaggatgtcaattcaggcgaacctccagccaagcataagggaaagaagtcgaaggctgcatcaaaatcaagcggcgaagtgtaccaatgggaaattatgcagagctttggcctctctaacagtgacatatccaaatttcaggacccttatgagtggttgacttattttcccccattggctgtggaggacctcaaggcttttggcctgggctgtgactggagacgttcctttattactacagacatgaacccttttttcgaccgctttgtgaggtggcaggttaggaaactgaaatccatgggtaagattgtcaaagatctccgttacacgatatactctccgatggatgggcaaccctgtgcagatcatgataggtccagtggtgaaggagttcagccccaagaatatactgtcatcaaaatggaactgatggcaccttttccttctaaattgggagtgttggaggggaggaaagtgttccttgctgcagcaacactgagacctgagaccatgtatggacaaacaaatgcatgggtattgcctgatggtaagtatggtgcatatgaaatcaatgaaacagatgtgttcattcttacacagagagcagcacgtaatcttgcttatcaaaagtactctagggtcccagagaaacctacttgcttggttgaactgactggttacgatttgattggccttccattgaagtcgccactagcagtgaatcagattatttatgctcttcctatgttgactgtcctaacagacaaaggtactgggattgtgaccagtgtacctactgattctccggatgactatatggccttgcatgacttgaaatcaaaacccgcttttagggcaaaatttggtgtgaaagatgagtgggtactgccctttgagattatcccaatcatcgatattccaggatatggaaataaggctgcggaaaaggtctgtgcaga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

452

Amino Acids

50.88

Weight (kDa)

6.74

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000598)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09620
fragaria_vesca FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_1g25930 FvH4_3g34581 FvH4_4g33720 FvH4_4g33720
malus_domestica MD08G1244600.v1.1 MD15G1439400.v1.1
prunus_persica Prupe.1G582000_v2.0.a1 Prupe.2G015100_v2.0.a1 Prupe.2G123100_v2.0.a1
pyrus_communis pycom08g21210 pycom08g21220 pycom15g38730
rosa_chinensis RchiOBHm_Chr1g0336121 RchiOBHm_Chr1g0353811 RchiOBHm_Chr1g0373331 RchiOBHm_Chr4g0443191 RchiOBHm_Chr4g0443201 RchiOBHm_Chr4g0443211
rosa_laevigata RLG00000003122 RLG00000005948 RLG00000026826 RLG00000028251 RLG00000028252 RLG00000028253 RLG00000029377
rosa_multiflora Rmu_co8002498.1_g000001 Rmu_co8262279.1_g000001 Rmu_co8314139.1_g000001 Rmu_co8393711.1_g000001 Rmu_co8419167.1_g000001 Rmu_sc0007968.1_g000004 Rmu_sc0018919.1_g000004 Rmu_sc0027447.1_g000001
rosa_roxburghii Rroxscaffold_4G00284260 Rroxscaffold_4G00301490 Rroxscaffold_4G00315860 Rroxscaffold_5G00383790 Rroxscaffold_5G00383800
rosa_rugosa Rorug01G0123100 Rorug01G0238700 Rorug01G0377100 Rorug01G0377100 Rorug01G0377200 Rorug01G0377300 Rorug04G0344700 Rorug05G0347900.1
rosa_samantha Rh1AG143800 Rh1AG250300 Rh1AG386300 Rh1BG113400 Rh1BG220800 Rh1BG220900 Rh1BG350400 Rh1CG135500 Rh1CG233100 Rh1CG363500 Rh1DG150200 Rh1DG247700 Rh1DG247800 Rh1DG381300 Rh4AG399400 Rh4AG399500 Rh4BG411000 Rh4BG411100 Rh4BG411200 Rh4CG426500 Rh4CG426600 Rh4DG406100 Rh4DG406200 Rh4DG406300
rosa_wichuraiana Rw0G015190 Rw1G021850 Rw1G034870 Rw4G034440 Rw4G034450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 667
AccB1I GGYRCC 1 cut(s) 832
AccB7I CCANNNNNTGG 1 cut(s) 1325
AccIII TCCGGA 1 cut(s) 1204
AciI CCGC 7 cut(s) 5, 15, 119, 471, 661, 1245, 1340
AcsI RAATTY 2 cut(s) 533, 1259
AfaI GTAC 6 cut(s) 280, 482, 1031, 1171, 1191, 1284
AfiI CCNNNNNNNGG 4 cut(s) 128, 746, 1251, 1325
AgsI TTSAA 4 cut(s) 329, 1067, 1102, 1234
AjnI CCWGG 5 cut(s) 29, 121, 127, 603, 1318
AluBI AGCT 5 cut(s) 24, 72, 211, 313, 504
AluI AGCT 5 cut(s) 24, 72, 211, 313, 504
Alw26I GTCTC 5 cut(s) 30, 111, 613, 892, 899
Aor13HI TCCGGA 1 cut(s) 1204
AoxI GGCC 6 cut(s) 99, 124, 508, 601, 1090, 1218
ApaI GGGCCC 1 cut(s) 103
ApeKI GCWGC 7 cut(s) 221, 224, 455, 884, 887, 1004, 1337
ApoI RAATTY 2 cut(s) 533, 1259
Asp700I GAANNNNTTC 2 cut(s) 789, 875
AspLEI GCGC 1 cut(s) 248
AspS9I GGNCC 7 cut(s) 99, 100, 125, 541, 586, 774, 1039
AsuHPI GGTGA 1 cut(s) 794
AvaII GGWCC 4 cut(s) 541, 586, 774, 1039
BaeGI GKGCMC 1 cut(s) 103
BaeI ACNNNNGTAYC 2 cut(s) 1173, 1206
BanI GGYRCC 1 cut(s) 832
BanII GRGCYC 1 cut(s) 103
BauI CACGAG 1 cut(s) 108
BbsI GAAGAC 1 cut(s) 87
BbvI GCAGC 7 cut(s) 208, 236, 442, 871, 899, 1016, 1324
BccI CCATC 6 cut(s) 48, 299, 736, 740, 823, 938
BciT130I CCWGG 5 cut(s) 31, 123, 129, 605, 1320
BcoDI GTCTC 5 cut(s) 30, 111, 613, 892, 899
BfaI CTAG 3 cut(s) 47, 1035, 1112
BfmI CTRYAG 3 cut(s) 222, 636, 885
BfuAI ACCTGC 1 cut(s) 667
BglII AGATCT 1 cut(s) 715
BisI GCNGC 9 cut(s) 119, 222, 225, 456, 472, 885, 888, 1005, 1338
BlsI GCNGC 9 cut(s) 120, 223, 226, 457, 473, 886, 889, 1006, 1339
BmcAI AGTACT 1 cut(s) 1031
Bme1390I CCNGG 5 cut(s) 31, 123, 129, 605, 1320
Bme18I GGWCC 4 cut(s) 541, 586, 774, 1039
BmgT120I GGNCC 7 cut(s) 99, 100, 125, 541, 586, 774, 1039
BmiI GGNNCC 5 cut(s) 101, 543, 834, 1040, 1041
BmrFI CCNGG 5 cut(s) 31, 123, 129, 605, 1320
BmrI ACTGGG 2 cut(s) 97, 1182
BmsI GCATC 2 cut(s) 190, 467
BmuI ACTGGG 2 cut(s) 97, 1182
BpiI GAAGAC 1 cut(s) 87
BplI GAGNNNNNCTC 2 cut(s) 27, 59
BpmI CTGGAG 3 cut(s) 233, 408, 637
BpuEI CTTGAG 1 cut(s) 575
Bsa29I ATCGAT 1 cut(s) 1311
BsaAI YACGTR 1 cut(s) 1010
BsaI GGTCTC 3 cut(s) 30, 892, 899
BsaJI CCNNGG 4 cut(s) 127, 128, 604, 696
BsaWI WCCGGW 1 cut(s) 1204
BsaXI ACNNNNNCTCC 2 cut(s) 1186, 1216
Bsc4I CCNNNNNNNGG 4 cut(s) 128, 746, 1251, 1325
Bse1I ACTGG 7 cut(s) 103, 286, 620, 777, 1078, 1177, 1185
BseAI TCCGGA 1 cut(s) 1204
BseBI CCWGG 5 cut(s) 31, 123, 129, 605, 1320
BseCI ATCGAT 1 cut(s) 1311
BseDI CCNNGG 4 cut(s) 127, 128, 604, 696
BseGI GGATG 3 cut(s) 409, 751, 1213
BseLI CCNNNNNNNGG 4 cut(s) 128, 746, 1251, 1325
BseMII CTCAG 2 cut(s) 887, 894
BseNI ACTGG 7 cut(s) 103, 286, 620, 777, 1078, 1177, 1185
BseSI GKGCMC 1 cut(s) 103
BseXI GCAGC 7 cut(s) 208, 236, 442, 871, 899, 1016, 1324
BsgI GTGCAG 2 cut(s) 132, 780
Bsh1285I CGRYCG 1 cut(s) 661
BshFI GGCC 6 cut(s) 101, 126, 510, 603, 1092, 1220
BshNI GGYRCC 1 cut(s) 832
BshVI ATCGAT 1 cut(s) 1311
BsiEI CGRYCG 1 cut(s) 661
BsiSI CCGG 1 cut(s) 1205
BslFI GGGAC 1 cut(s) 1025
BslI CCNNNNNNNGG 4 cut(s) 128, 746, 1251, 1325
BsmAI GTCTC 5 cut(s) 30, 111, 613, 892, 899
BsmBI CGTCTC 1 cut(s) 613
BsmFI GGGAC 1 cut(s) 1025
BsnI GGCC 6 cut(s) 101, 126, 510, 603, 1092, 1220
Bso31I GGTCTC 3 cut(s) 30, 892, 899
Bsp120I GGGCCC 1 cut(s) 99
Bsp1286I GDGCHC 1 cut(s) 103
Bsp13I TCCGGA 1 cut(s) 1204
Bsp143I GATC 2 cut(s) 715, 763
Bsp19I CCATGG 1 cut(s) 696
BspACI CCGC 7 cut(s) 5, 15, 119, 471, 661, 1245, 1340
BspANI GGCC 6 cut(s) 101, 126, 510, 603, 1092, 1220
BspCNI CTCAG 2 cut(s) 888, 895
BspDI ATCGAT 1 cut(s) 1311
BspEI TCCGGA 1 cut(s) 1204
BspHI TCATGA 1 cut(s) 766
BspLI GGNNCC 5 cut(s) 101, 543, 834, 1040, 1041
BspMAI CTGCAG 2 cut(s) 226, 889
BspMI ACCTGC 1 cut(s) 667
BspQI GCTCTTC 2 cut(s) 14, 1143
BspT107I GGYRCC 1 cut(s) 832
BspTNI GGTCTC 3 cut(s) 30, 892, 899
BsrI ACTGG 7 cut(s) 103, 286, 620, 777, 1078, 1177, 1185
BssECI CCNNGG 4 cut(s) 127, 128, 604, 696
BssMI GATC 2 cut(s) 715, 763
BssSI CACGAG 1 cut(s) 108
BssT1I CCWWGG 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 108
Bst2UI CCWGG 5 cut(s) 31, 123, 129, 605, 1320
Bst4CI ACNGT 7 cut(s) 173, 204, 278, 333, 521, 811, 1153
Bst6I CTCTTC 2 cut(s) 14, 1143
BstBAI YACGTR 1 cut(s) 1010
BstC8I GCNNGC 1 cut(s) 287
BstDEI CTNAG 2 cut(s) 896, 903
BstDSI CCRYGG 1 cut(s) 696
BstF5I GGATG 3 cut(s) 409, 751, 1213
BstHHI GCGC 1 cut(s) 248
BstKTI GATC 2 cut(s) 718, 766
BstMAI GTCTC 5 cut(s) 30, 111, 613, 892, 899
BstMBI GATC 2 cut(s) 715, 763
BstMCI CGRYCG 1 cut(s) 661
BstMWI GCNNNNNNNGC 2 cut(s) 21, 1253
BstNI CCWGG 5 cut(s) 31, 123, 129, 605, 1320
BstNSI RCATGY 2 cut(s) 194, 289
BstSCI CCNGG 5 cut(s) 29, 121, 127, 603, 1318
BstSFI CTRYAG 3 cut(s) 222, 636, 885
BstSLI GKGCMC 1 cut(s) 103
BstV1I GCAGC 7 cut(s) 208, 236, 442, 871, 899, 1016, 1324
BstV2I GAAGAC 1 cut(s) 87
BstX2I RGATCY 1 cut(s) 715
BstXI CCANNNNNNTGG 1 cut(s) 364
BstYI RGATCY 1 cut(s) 715
Bsu15I ATCGAT 1 cut(s) 1311
BsuRI GGCC 6 cut(s) 101, 126, 510, 603, 1092, 1220
BsuTUI ATCGAT 1 cut(s) 1311
BtgI CCRYGG 1 cut(s) 696
BtsCI GGATG 3 cut(s) 409, 751, 1213
BtsI GCAGTG 1 cut(s) 1122
BtsIMutI CAGTG 7 cut(s) 200, 274, 526, 784, 893, 1122, 1192
BveI ACCTGC 1 cut(s) 667
Cac8I GCNNGC 1 cut(s) 287
CciI TCATGA 1 cut(s) 766
CfoI GCGC 1 cut(s) 248
Cfr13I GGNCC 7 cut(s) 99, 100, 125, 541, 586, 774, 1039
ClaI ATCGAT 1 cut(s) 1311
Csp6I GTAC 6 cut(s) 279, 481, 1030, 1170, 1190, 1283
CviAII CATG 8 cut(s) 191, 286, 643, 697, 767, 910, 930, 1226
CviQI GTAC 6 cut(s) 279, 481, 1030, 1170, 1190, 1283
DdeI CTNAG 2 cut(s) 896, 903
DpnI GATC 2 cut(s) 717, 765
DpnII GATC 2 cut(s) 715, 763
Eam1104I CTCTTC 2 cut(s) 14, 1143
EarI CTCTTC 2 cut(s) 14, 1143
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 696
Eco24I GRGCYC 1 cut(s) 103
Eco31I GGTCTC 3 cut(s) 30, 892, 899
Eco47I GGWCC 4 cut(s) 541, 586, 774, 1039
EcoO109I RGGNCCY 4 cut(s) 99, 541, 586, 1039
EcoRII CCWGG 5 cut(s) 29, 121, 127, 603, 1318
EcoT14I CCWWGG 1 cut(s) 696
EcoT22I ATGCAT 1 cut(s) 931
EcoT38I GRGCYC 1 cut(s) 103
ErhI CCWWGG 1 cut(s) 696
Esp3I CGTCTC 1 cut(s) 613
FaeI CATG 8 cut(s) 194, 289, 646, 700, 770, 913, 933, 1229
FalI AAGNNNNNCTT 2 cut(s) 864, 896
FaqI GGGAC 1 cut(s) 1025
FatI CATG 8 cut(s) 190, 285, 642, 696, 766, 909, 929, 1225
FauI CCCGC 2 cut(s) 8, 1252
FauNDI CATATG 1 cut(s) 961
Fnu4HI GCNGC 9 cut(s) 119, 222, 225, 456, 472, 885, 888, 1005, 1338
FokI GGATG 3 cut(s) 416, 758, 1220
FriOI GRGCYC 1 cut(s) 103
Fsp4HI GCNGC 9 cut(s) 119, 222, 225, 456, 472, 885, 888, 1005, 1338
FspBI CTAG 3 cut(s) 47, 1035, 1112
GlaI GCGC 1 cut(s) 247
GluI GCNGC 9 cut(s) 119, 222, 225, 456, 472, 885, 888, 1005, 1338
GsuI CTGGAG 3 cut(s) 233, 408, 637
HaeIII GGCC 6 cut(s) 101, 126, 510, 603, 1092, 1220
HapII CCGG 1 cut(s) 1205
HhaI GCGC 1 cut(s) 248
Hin1II CATG 8 cut(s) 194, 289, 646, 700, 770, 913, 933, 1229
Hin6I GCGC 1 cut(s) 246
HinP1I GCGC 1 cut(s) 246
HincII GTYRAC 2 cut(s) 558, 1149
HindII GTYRAC 2 cut(s) 558, 1149
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 3 cut(s) 325, 1120, 1199
HpaII CCGG 1 cut(s) 1205
HphI GGTGA 1 cut(s) 794
Hpy166II GTNNAC 4 cut(s) 481, 558, 1149, 1190
Hpy188I TCNGA 3 cut(s) 188, 741, 1125
Hpy188III TCNNGA 3 cut(s) 539, 767, 1205
Hpy8I GTNNAC 4 cut(s) 481, 558, 1149, 1190
HpyAV CCTTC 7 cut(s) 5, 166, 205, 445, 779, 852, 1103
HpyCH4III ACNGT 7 cut(s) 173, 204, 278, 333, 521, 811, 1153
HpyCH4IV ACGT 2 cut(s) 622, 1009
HpyF10VI GCNNNNNNNGC 2 cut(s) 21, 1253
HpyF3I CTNAG 2 cut(s) 896, 903
HpySE526I ACGT 2 cut(s) 622, 1009
Hsp92II CATG 8 cut(s) 194, 289, 646, 700, 770, 913, 933, 1229
HspAI GCGC 1 cut(s) 246
KflI GGGWCCC 1 cut(s) 1039
Kpn2I TCCGGA 1 cut(s) 1204
Kzo9I GATC 2 cut(s) 715, 763
LguI GCTCTTC 2 cut(s) 14, 1143
Lsp1109I GCAGC 7 cut(s) 208, 236, 442, 871, 899, 1016, 1324
LweI GCATC 2 cut(s) 190, 467
MaeI CTAG 3 cut(s) 47, 1035, 1112
MaeII ACGT 2 cut(s) 622, 1009
MaeIII GTNAC 5 cut(s) 521, 611, 722, 1076, 1180
MalI GATC 2 cut(s) 717, 765
MboI GATC 2 cut(s) 715, 763
MboII GAAGA 3 cut(s) 31, 92, 1130
MflI RGATCY 1 cut(s) 715
MhlI GDGCHC 1 cut(s) 103
MluCI AATT 5 cut(s) 409, 492, 533, 848, 1259
MmeI TCCRAC 1 cut(s) 840
Mph1103I ATGCAT 1 cut(s) 931
MroI TCCGGA 1 cut(s) 1204
MroXI GAANNNNTTC 2 cut(s) 789, 875
MslI CAYNNNNRTG 1 cut(s) 818
MspI CCGG 1 cut(s) 1205
MspR9I CCNGG 5 cut(s) 31, 123, 129, 605, 1320
MvaI CCWGG 5 cut(s) 31, 123, 129, 605, 1320
MwoI GCNNNNNNNGC 2 cut(s) 21, 1253
NcoI CCATGG 1 cut(s) 696
NdeI CATATG 1 cut(s) 961
NdeII GATC 2 cut(s) 715, 763
NlaIII CATG 8 cut(s) 194, 289, 646, 700, 770, 913, 933, 1229
NlaIV GGNNCC 5 cut(s) 101, 543, 834, 1040, 1041
NmuCI GTSAC 3 cut(s) 521, 611, 1180
NsiI ATGCAT 1 cut(s) 931
NspI RCATGY 2 cut(s) 194, 289
PaeI GCATGC 1 cut(s) 289
PagI TCATGA 1 cut(s) 766
PasI CCCWGGG 1 cut(s) 128
PciSI GCTCTTC 2 cut(s) 14, 1143
PdmI GAANNNNTTC 2 cut(s) 789, 875
PfeI GAWTC 3 cut(s) 325, 1120, 1199
PflMI CCANNNNNTGG 1 cut(s) 1325
PfoI TCCNGGA 1 cut(s) 1318
PkrI GCNGC 9 cut(s) 120, 223, 226, 457, 473, 886, 889, 1006, 1339
Ppu21I YACGTR 1 cut(s) 1010
PpuMI RGGWCCY 3 cut(s) 541, 586, 1039
Psp5II RGGWCCY 3 cut(s) 541, 586, 1039
Psp6I CCWGG 5 cut(s) 29, 121, 127, 603, 1318
PspGI CCWGG 5 cut(s) 29, 121, 127, 603, 1318
PspN4I GGNNCC 5 cut(s) 101, 543, 834, 1040, 1041
PspOMI GGGCCC 1 cut(s) 99
PspPI GGNCC 7 cut(s) 99, 100, 125, 541, 586, 774, 1039
PspPPI RGGWCCY 3 cut(s) 541, 586, 1039
PstI CTGCAG 2 cut(s) 226, 889
PsuI RGATCY 1 cut(s) 715
RsaI GTAC 6 cut(s) 280, 482, 1031, 1171, 1191, 1284
RsaNI GTAC 6 cut(s) 279, 481, 1030, 1170, 1190, 1283
RseI CAYNNNNRTG 1 cut(s) 818
SapI GCTCTTC 2 cut(s) 14, 1143
SatI GCNGC 9 cut(s) 119, 222, 225, 456, 472, 885, 888, 1005, 1338
Sau3AI GATC 2 cut(s) 715, 763
Sau96I GGNCC 7 cut(s) 99, 100, 125, 541, 586, 774, 1039
ScaI AGTACT 1 cut(s) 1031
ScrFI CCNGG 5 cut(s) 31, 123, 129, 605, 1320
SduI GDGCHC 1 cut(s) 103
SfaNI GCATC 2 cut(s) 190, 467
SfcI CTRYAG 3 cut(s) 222, 636, 885
SinI GGWCC 4 cut(s) 541, 586, 774, 1039
SmiMI CAYNNNNRTG 1 cut(s) 818
SmlI CTYRAG 1 cut(s) 590
SmoI CTYRAG 1 cut(s) 590
SphI GCATGC 1 cut(s) 289
Sse9I AATT 5 cut(s) 409, 492, 533, 848, 1259
SsiI CCGC 7 cut(s) 5, 15, 119, 471, 661, 1245, 1340
SspMI CTAG 3 cut(s) 47, 1035, 1112
StyD4I CCNGG 5 cut(s) 29, 121, 127, 603, 1318
StyI CCWWGG 1 cut(s) 696
TaaI ACNGT 7 cut(s) 173, 204, 278, 333, 521, 811, 1153
TaiI ACGT 2 cut(s) 625, 1012
TaqI TCGA 5 cut(s) 67, 206, 449, 657, 1311
TasI AATT 5 cut(s) 409, 492, 533, 848, 1259
TatI WGTACW 2 cut(s) 278, 1029
TauI GCSGC 2 cut(s) 121, 474
TfiI GAWTC 3 cut(s) 325, 1120, 1199
TscAI CASTG 7 cut(s) 207, 281, 526, 784, 900, 1122, 1192
TseFI GTSAC 3 cut(s) 521, 611, 1180
TseI GCWGC 7 cut(s) 221, 224, 455, 884, 887, 1004, 1337
Tsp45I GTSAC 3 cut(s) 521, 611, 1180
TspDTI ATGAA 5 cut(s) 182, 659, 976, 978, 987
TspGWI ACGGA 1 cut(s) 710
TspRI CASTG 7 cut(s) 207, 281, 526, 784, 900, 1122, 1192
Van91I CCANNNNNTGG 1 cut(s) 1325
VpaK11BI GGWCC 4 cut(s) 541, 586, 774, 1039
XapI RAATTY 2 cut(s) 533, 1259
XceI RCATGY 2 cut(s) 194, 289
XmnI GAANNNNTTC 2 cut(s) 789, 875
XspI CTAG 3 cut(s) 47, 1035, 1112
ZrmI AGTACT 1 cut(s) 1031
Zsp2I ATGCAT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.