FvH4_4g36371

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0015614
Physical Location & Seq
Forward (+)
33331495 .. 33335274
3780 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36371.t1

Sequence Viewer

Length: 1089 bp
ATGAAAGGAAAGGTAGGATTACCAGGAAACTACTTTGTGTTGAACACAGGAGATAAAATCCCAGCCATTGGACTTGGGACATGGCAGAGTGGTGGAGACCTTTGTGTTCAAGCTGTGAAAACAGCATTATCAGTAGGTTACCGACACATAGATTGTGCACATCTTTATGGTAATGAGGTTGAAGTTGGTGAGGCATTAGCTGAAGCATTTAAGGGTTCACTGAAGAGGGAGGATGTTTTCTTGACTTCTAAGCTCTACTGCACAATGAATTCTCTCAATAAAATCGAGAATTATGTGAGAGTTTCTCTGAAGAACCTCGGCGTTTCATATTTGGATCTGTATTTGATGCATTGGCCTGACAGCTCTGCTTTTGGTGATGCTACTGATCCTCCTTCGAAATCCGGGAGTGAGTATAGGCAGTTCTTGAATCGGTTGAAGAAAGCATGGAAAGCTATGGAAGGACTGGTCGAGTTGGGTCTGGTTAGAGCCATTGGGGTCAGCAATTTCAGTGTTGAGCAGATCAAACAGTTGCTTAAATTTGCAAAGATTGTACCTGCAGTCAATCAGGTGGAGTTGCACCCTTTTTGGAGGCAAGATGAACTTGTGAAATTATGTCAATTGAAAGGTATTCATGTATCAGCTCACACGCCCTTAGGAGTCCCAGCTTCAAATCCTGGACCATCTGATAGCAGTTCAGGTGGGGAAGATGAGCCTGGAACTCCTCGCATATCATTCAGGAGGTCTAGGTCTGTGCATGGGCCTATGCTGAAATTGTCAACAGTTGAACAAATAGCAGACAGACTCAGAAAAACACCTGAGCAGGTAATTTTGCGCTGGGGGTTGCAAAGAGGAACCAGCGTCCTACCATGTAGCTTGAAGCCAGATAGAATAAGAAAAAACATAGACATCTTCAGTTGGTCGCTGACAGACGACGAGTGGAATCGGTTGAACCACATTGAACCACAGGTATGCTTATTTGGAAACAGCCCTTTGAATACTCTTTCGGAGAGTGGCTTTGTGTCGGAAAGTGGATGTGGTCCACTTCAAGCTGTGCATGAGATGGAAGATGACATGGAATCCAATGCCTGA

Protein Analysis

363

Amino Acids

39.99

Weight (kDa)

6.76

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 22 - 319 9.7e-54 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015614)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g36371
malus_domestica MD13G1009500.v1.1 MD16G1007700.v1.1
prunus_persica Prupe.1G343100_v2.0.a1
pyrus_communis pycom13g00810 pycom16g00760
rosa_chinensis RchiOBHm_Chr4g0446121
rosa_laevigata RLG00000005690
rosa_multiflora Rmu_sc0012061.1_g000005
rosa_roxburghii Rroxscaffold_5G00386520
rosa_rugosa Rorug04G0368000
rosa_samantha Rh4AG429600 Rh4BG439100 Rh4CG456400 Rh4DG437500
rosa_wichuraiana Rw4G036710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 562, 811
AccB7I CCANNNNNTGG 1 cut(s) 68
AclWI GGATC 2 cut(s) 342, 380
AcsI RAATTY 2 cut(s) 268, 536
AcuI CTGAAG 4 cut(s) 222, 242, 329, 895
AfaI GTAC 1 cut(s) 552
AfiI CCNNNNNNNGG 1 cut(s) 68
AjnI CCWGG 3 cut(s) 22, 673, 712
AluBI AGCT 9 cut(s) 113, 200, 253, 363, 452, 641, 665, 873, 1049
AluI AGCT 9 cut(s) 113, 200, 253, 363, 452, 641, 665, 873, 1049
Alw21I GWGCWC 1 cut(s) 160
Alw26I GTCTC 1 cut(s) 90
Alw44I GTGCAC 1 cut(s) 156
AlwI GGATC 2 cut(s) 342, 380
AoxI GGCC 2 cut(s) 353, 758
ApaLI GTGCAC 1 cut(s) 156
ApoI RAATTY 2 cut(s) 268, 536
AspLEI GCGC 1 cut(s) 834
AspS9I GGNCC 3 cut(s) 677, 758, 1037
AsuC2I CCSGG 1 cut(s) 403
AsuHPI GGTGA 2 cut(s) 200, 386
AsuII TTCGAA 1 cut(s) 395
AvaII GGWCC 2 cut(s) 677, 1037
AxyI CCTNAGG 1 cut(s) 652
BaeGI GKGCMC 1 cut(s) 160
Bbv12I GWGCWC 1 cut(s) 160
BccI CCATC 2 cut(s) 688, 1054
BciT130I CCWGG 3 cut(s) 24, 675, 714
BcnI CCSGG 1 cut(s) 403
BcoDI GTCTC 1 cut(s) 90
BfaI CTAG 1 cut(s) 744
BfmI CTRYAG 1 cut(s) 555
BfuAI ACCTGC 2 cut(s) 562, 811
Bme1390I CCNGG 4 cut(s) 24, 403, 675, 714
Bme18I GGWCC 2 cut(s) 677, 1037
BmgT120I GGNCC 3 cut(s) 677, 758, 1037
BmiI GGNNCC 1 cut(s) 853
BmrFI CCNGG 4 cut(s) 24, 403, 675, 714
BmsI GCATC 2 cut(s) 336, 367
BplI GAGNNNNNCTC 2 cut(s) 289, 321
Bpu10I CCTNAGC 1 cut(s) 816
Bpu14I TTCGAA 1 cut(s) 395
BpuMI CCSGG 1 cut(s) 403
BsaI GGTCTC 1 cut(s) 90
BsaJI CCNNGG 1 cut(s) 316
BsaXI ACNNNNNCTCC 2 cut(s) 373, 403
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse1I ACTGG 1 cut(s) 468
Bse21I CCTNAGG 1 cut(s) 652
BseBI CCWGG 3 cut(s) 24, 675, 714
BseDI CCNNGG 1 cut(s) 316
BseGI GGATG 2 cut(s) 238, 1037
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMII CTCAG 2 cut(s) 807, 817
BseNI ACTGG 1 cut(s) 468
BseRI GAGGAG 1 cut(s) 711
BseSI GKGCMC 1 cut(s) 160
BseYI CCCAGC 3 cut(s) 61, 661, 834
BsgI GTGCAG 1 cut(s) 244
BshFI GGCC 2 cut(s) 355, 760
BsiHKAI GWGCWC 1 cut(s) 160
BsiSI CCGG 1 cut(s) 402
BslFI GGGAC 2 cut(s) 91, 644
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 1 cut(s) 90
BsmFI GGGAC 2 cut(s) 91, 644
BsnI GGCC 2 cut(s) 355, 760
Bso31I GGTCTC 1 cut(s) 90
Bsp119I TTCGAA 1 cut(s) 395
Bsp1286I GDGCHC 1 cut(s) 160
Bsp143I GATC 3 cut(s) 334, 385, 519
BspANI GGCC 2 cut(s) 355, 760
BspCNI CTCAG 2 cut(s) 808, 816
BspLI GGNNCC 1 cut(s) 853
BspMAI CTGCAG 1 cut(s) 559
BspMI ACCTGC 2 cut(s) 562, 811
BspPI GGATC 2 cut(s) 342, 380
BspT104I TTCGAA 1 cut(s) 395
BspTNI GGTCTC 1 cut(s) 90
BsrI ACTGG 1 cut(s) 468
BssECI CCNNGG 1 cut(s) 316
BssMI GATC 3 cut(s) 334, 385, 519
Bst2UI CCWGG 3 cut(s) 24, 675, 714
Bst4CI ACNGT 2 cut(s) 528, 781
Bst6I CTCTTC 1 cut(s) 218
BstBI TTCGAA 1 cut(s) 395
BstDEI CTNAG 4 cut(s) 249, 652, 803, 816
BstEII GGTNACC 1 cut(s) 137
BstF5I GGATG 2 cut(s) 238, 1037
BstHHI GCGC 1 cut(s) 834
BstKTI GATC 3 cut(s) 337, 388, 522
BstMAI GTCTC 1 cut(s) 90
BstMBI GATC 3 cut(s) 334, 385, 519
BstMWI GCNNNNNNNGC 1 cut(s) 449
BstNI CCWGG 3 cut(s) 24, 675, 714
BstPI GGTNACC 1 cut(s) 137
BstSCI CCNGG 4 cut(s) 22, 401, 673, 712
BstSFI CTRYAG 1 cut(s) 555
BstSLI GKGCMC 1 cut(s) 160
BstX2I RGATCY 1 cut(s) 334
BstYI RGATCY 1 cut(s) 334
Bsu36I CCTNAGG 1 cut(s) 652
BsuRI GGCC 2 cut(s) 355, 760
BtsCI GGATG 2 cut(s) 238, 1037
BtsIMutI CAGTG 2 cut(s) 218, 514
BveI ACCTGC 2 cut(s) 562, 811
CfoI GCGC 1 cut(s) 834
Cfr13I GGNCC 3 cut(s) 677, 758, 1037
CseI GACGC 1 cut(s) 847
Csp6I GTAC 1 cut(s) 551
CviAII CATG 7 cut(s) 81, 444, 632, 755, 867, 1055, 1072
CviQI GTAC 1 cut(s) 551
DdeI CTNAG 4 cut(s) 249, 652, 803, 816
DpnI GATC 3 cut(s) 336, 387, 521
DpnII GATC 3 cut(s) 334, 385, 519
Eam1104I CTCTTC 1 cut(s) 218
EarI CTCTTC 1 cut(s) 218
Eco31I GGTCTC 1 cut(s) 90
Eco47I GGWCC 2 cut(s) 677, 1037
Eco57I CTGAAG 4 cut(s) 222, 242, 329, 895
Eco81I CCTNAGG 1 cut(s) 652
Eco91I GGTNACC 1 cut(s) 137
EcoO65I GGTNACC 1 cut(s) 137
EcoRI GAATTC 1 cut(s) 268
EcoRII CCWGG 3 cut(s) 22, 673, 712
EcoT22I ATGCAT 1 cut(s) 351
FaeI CATG 7 cut(s) 84, 447, 635, 758, 870, 1058, 1075
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 2 cut(s) 91, 644
FatI CATG 7 cut(s) 80, 443, 631, 754, 866, 1054, 1071
FokI GGATG 2 cut(s) 245, 1044
FspBI CTAG 1 cut(s) 744
GlaI GCGC 1 cut(s) 833
GsaI CCCAGC 3 cut(s) 65, 665, 838
HaeIII GGCC 2 cut(s) 355, 760
HapII CCGG 1 cut(s) 402
HgaI GACGC 1 cut(s) 847
HhaI GCGC 1 cut(s) 834
Hin1II CATG 7 cut(s) 84, 447, 635, 758, 870, 1058, 1075
Hin6I GCGC 1 cut(s) 832
HinP1I GCGC 1 cut(s) 832
HincII GTYRAC 1 cut(s) 777
HindII GTYRAC 1 cut(s) 777
HinfI GANTC 5 cut(s) 427, 657, 801, 940, 1076
HpaII CCGG 1 cut(s) 402
HphI GGTGA 2 cut(s) 200, 386
Hpy166II GTNNAC 4 cut(s) 158, 218, 777, 1040
Hpy188I TCNGA 5 cut(s) 309, 685, 806, 1006, 1024
Hpy188III TCNNGA 4 cut(s) 241, 286, 424, 736
Hpy8I GTNNAC 4 cut(s) 158, 218, 777, 1040
Hpy99I CGWCG 1 cut(s) 935
HpyAV CCTTC 2 cut(s) 402, 452
HpyCH4III ACNGT 2 cut(s) 528, 781
HpyCH4V TGCA 9 cut(s) 158, 261, 349, 542, 557, 577, 754, 844, 1054
HpyF10VI GCNNNNNNNGC 1 cut(s) 449
HpyF3I CTNAG 4 cut(s) 249, 652, 803, 816
Hsp92II CATG 7 cut(s) 84, 447, 635, 758, 870, 1058, 1075
HspAI GCGC 1 cut(s) 832
Kzo9I GATC 3 cut(s) 334, 385, 519
LweI GCATC 2 cut(s) 336, 367
MaeI CTAG 1 cut(s) 744
MaeIII GTNAC 1 cut(s) 137
MalI GATC 3 cut(s) 336, 387, 521
MboI GATC 3 cut(s) 334, 385, 519
MboII GAAGA 6 cut(s) 235, 322, 448, 716, 901, 1076
MfeI CAATTG 1 cut(s) 617
MflI RGATCY 1 cut(s) 334
MhlI GDGCHC 1 cut(s) 160
MluCI AATT 8 cut(s) 268, 289, 502, 536, 608, 617, 770, 825
MlyI GAGTC 2 cut(s) 666, 795
MmeI TCCRAC 1 cut(s) 1002
Mph1103I ATGCAT 1 cut(s) 351
MseI TTAA 2 cut(s) 210, 534
MslI CAYNNNNRTG 2 cut(s) 165, 967
MspI CCGG 1 cut(s) 402
MspR9I CCNGG 4 cut(s) 24, 403, 675, 714
MunI CAATTG 1 cut(s) 617
MvaI CCWGG 3 cut(s) 24, 675, 714
MwoI GCNNNNNNNGC 1 cut(s) 449
NciI CCSGG 1 cut(s) 403
NdeII GATC 3 cut(s) 334, 385, 519
NlaIII CATG 7 cut(s) 84, 447, 635, 758, 870, 1058, 1075
NlaIV GGNNCC 1 cut(s) 853
NmeAIII GCCGAG 1 cut(s) 297
NsiI ATGCAT 1 cut(s) 351
NspV TTCGAA 1 cut(s) 395
PfeI GAWTC 3 cut(s) 427, 940, 1076
PflMI CCANNNNNTGG 1 cut(s) 68
PfoI TCCNGGA 2 cut(s) 401, 673
PleI GAGTC 2 cut(s) 665, 795
PpsI GAGTC 2 cut(s) 665, 795
Psp6I CCWGG 3 cut(s) 22, 673, 712
PspEI GGTNACC 1 cut(s) 137
PspFI CCCAGC 3 cut(s) 61, 661, 834
PspGI CCWGG 3 cut(s) 22, 673, 712
PspN4I GGNNCC 1 cut(s) 853
PspPI GGNCC 3 cut(s) 677, 758, 1037
PsrI GAACNNNNNNTAC 2 cut(s) 404, 436
PstI CTGCAG 1 cut(s) 559
PsuI RGATCY 1 cut(s) 334
RsaI GTAC 1 cut(s) 552
RsaNI GTAC 1 cut(s) 551
RseI CAYNNNNRTG 2 cut(s) 165, 967
SaqAI TTAA 2 cut(s) 210, 534
Sau3AI GATC 3 cut(s) 334, 385, 519
Sau96I GGNCC 3 cut(s) 677, 758, 1037
SchI GAGTC 2 cut(s) 666, 795
ScrFI CCNGG 4 cut(s) 24, 403, 675, 714
SduI GDGCHC 1 cut(s) 160
SfaNI GCATC 2 cut(s) 336, 367
SfcI CTRYAG 1 cut(s) 555
SfuI TTCGAA 1 cut(s) 395
SinI GGWCC 2 cut(s) 677, 1037
SmiMI CAYNNNNRTG 2 cut(s) 165, 967
Sse9I AATT 8 cut(s) 268, 289, 502, 536, 608, 617, 770, 825
SspMI CTAG 1 cut(s) 744
StyD4I CCNGG 4 cut(s) 22, 401, 673, 712
TaaI ACNGT 2 cut(s) 528, 781
TaqI TCGA 3 cut(s) 285, 395, 468
TasI AATT 8 cut(s) 268, 289, 502, 536, 608, 617, 770, 825
TfiI GAWTC 3 cut(s) 427, 940, 1076
Tru1I TTAA 2 cut(s) 210, 534
Tru9I TTAA 2 cut(s) 210, 534
TscAI CASTG 2 cut(s) 225, 514
TspDTI ATGAA 5 cut(s) 17, 281, 315, 612, 620
TspRI CASTG 2 cut(s) 225, 514
Van91I CCANNNNNTGG 1 cut(s) 68
VneI GTGCAC 1 cut(s) 156
VpaK11BI GGWCC 2 cut(s) 677, 1037
XapI RAATTY 2 cut(s) 268, 536
XspI CTAG 1 cut(s) 744
Zsp2I ATGCAT 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.