pycom16g00760

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0015614
Physical Location & Seq
Reverse (-)
455419 .. 458455
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g00760.1

Sequence Viewer

Length: 1083 bp
ATGAAGGGAAAGTTTGGAACACCAGGAAGTTACTTTGTGTTAAACACAGGGGATAGAATTCCTGCCATTGGACTTGGGACATGGCAGAGTGGTGGAGACCTTTGTGTTCAAGCCGTAAAAACGGCGTTATCAGTTGGTTACCGCCATATAGATTGTGCACATCTTTATGGTAATGAGATTGAAGTTGGGGAAGCATTAGCTGAAGCATTTAAGGGTTCACTGAAGAGGGAAGACGTTTTCTTGACTTCTAAGCTCTACTGCACAATGAATTCTCTCAATAAAATCGAGAACTATGTTCGAGTTTCTCTTAAGAATCTTGGAGTTTCATATTTGGATCTATATTTGATGCATTGGCCTGACAGCTCGGCGTTTGGTGATGCTACTGATCCTCCTTCAAAGTCTGGGAGTGAGTATAGGCAATTCTTGAATCGGTTGAAGAAAGCATGGAAAGCTATGGAAGGTCTGGTTGAGATGGGTCTGGTGAGAGCTATTGGGGTCAGCAATTTCAGTGTTTCGCAAATCAAACAATTGCTTAAATTTGCAAAGATTGTACCTGCTGTGAATCAGGTGGAGTTGCACCCATTTTGGAGGCAAGATGAACTTGTAAAGTTCTGTCAATTGAAAGGTATCCATGTGTCTGCTCACACACCCTTAGGAGTCCCAACTTCTACTCCTGGACCATCTGATAGCAGTTCAGGTGGGGAAGATGAACCTGGAACTCCTCGCATATCATTCAGGAGGTCAAGGTCTGTGCATGGGCCTATGCTGAAAATATCAACAGTTTCAGAGATAGCAGACCGACACAGAAAAACACCTGAGCAGGTGATTTTGCGTTGGGGGCTGCAAAGAGGAACCAGTGTGCTGCCTTGCAGCCTGAAGCCTGATAGGATAAGAAAAAACATAGACATCTTCAGTTGGTCTCTATCAGATGATGAGTGGAACCGCTTGAACCAGATCGAGCCCCAGGTATGCTTGTTTGGAAACGGTCCTTTGAATAATCTATCGGAGAGTGGGTTTATGTCTGGAAGTGTTCCACTTCAAGCTGTGCATGAGATGGAAGATGACATGGAATCCAATGCCTGA

Protein Analysis

361

Amino Acids

39.86

Weight (kDa)

7.65

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 22 - 319 7.5e-56 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015614)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g36371
malus_domestica MD13G1009500.v1.1 MD16G1007700.v1.1
prunus_persica Prupe.1G343100_v2.0.a1
pyrus_communis pycom13g00810 pycom16g00760
rosa_chinensis RchiOBHm_Chr4g0446121
rosa_laevigata RLG00000005690
rosa_multiflora Rmu_sc0012061.1_g000005
rosa_roxburghii Rroxscaffold_5G00386520
rosa_rugosa Rorug04G0368000
rosa_samantha Rh4AG429600 Rh4BG439100 Rh4CG456400 Rh4DG437500
rosa_wichuraiana Rw4G036710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 811
Acc36I ACCTGC 2 cut(s) 562, 811
AciI CCGC 2 cut(s) 142, 943
AclWI GGATC 2 cut(s) 342, 380
AcsI RAATTY 3 cut(s) 57, 268, 536
AcuI CTGAAG 4 cut(s) 222, 242, 895, 896
AfaI GTAC 1 cut(s) 552
AfiI CCNNNNNNNGG 1 cut(s) 68
AflII CTTAAG 1 cut(s) 308
AgsI TTSAA 9 cut(s) 110, 182, 396, 427, 436, 622, 949, 994, 1040
AjnI CCWGG 4 cut(s) 22, 673, 712, 963
AluBI AGCT 6 cut(s) 200, 253, 363, 452, 488, 1043
AluI AGCT 6 cut(s) 200, 253, 363, 452, 488, 1043
Alw21I GWGCWC 1 cut(s) 160
Alw26I GTCTC 2 cut(s) 90, 924
Alw44I GTGCAC 1 cut(s) 156
AlwI GGATC 2 cut(s) 342, 380
AoxI GGCC 2 cut(s) 353, 758
ApaLI GTGCAC 1 cut(s) 156
ApeKI GCWGC 3 cut(s) 841, 862, 870
ApoI RAATTY 3 cut(s) 57, 268, 536
AspS9I GGNCC 3 cut(s) 677, 758, 986
AsuHPI GGTGA 3 cut(s) 386, 493, 835
AvaII GGWCC 2 cut(s) 677, 986
AxyI CCTNAGG 1 cut(s) 652
BaeGI GKGCMC 1 cut(s) 160
BanII GRGCYC 1 cut(s) 963
BbsI GAAGAC 1 cut(s) 237
Bbv12I GWGCWC 1 cut(s) 160
BbvI GCAGC 3 cut(s) 828, 849, 882
BccI CCATC 3 cut(s) 466, 688, 1048
BceAI ACGGC 2 cut(s) 98, 138
BciT130I CCWGG 4 cut(s) 24, 675, 714, 965
BciVI GTATCC 1 cut(s) 638
BcoDI GTCTC 2 cut(s) 90, 924
BfrI CTTAAG 1 cut(s) 308
BfuAI ACCTGC 2 cut(s) 562, 811
BfuI GTATCC 1 cut(s) 638
BisI GCNGC 3 cut(s) 842, 863, 871
BlsI GCNGC 3 cut(s) 843, 864, 872
Bme1390I CCNGG 4 cut(s) 24, 675, 714, 965
Bme18I GGWCC 2 cut(s) 677, 986
BmgT120I GGNCC 3 cut(s) 677, 758, 986
BmiI GGNNCC 2 cut(s) 853, 941
BmrFI CCNGG 4 cut(s) 24, 675, 714, 965
BmsI GCATC 2 cut(s) 336, 367
BpiI GAAGAC 1 cut(s) 237
Bpu10I CCTNAGC 1 cut(s) 816
BsaI GGTCTC 2 cut(s) 90, 924
BsaJI CCNNGG 1 cut(s) 963
BsaXI ACNNNNNCTCC 6 cut(s) 373, 403, 655, 685, 998, 1028
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse1I ACTGG 1 cut(s) 855
Bse21I CCTNAGG 1 cut(s) 652
BseBI CCWGG 4 cut(s) 24, 675, 714, 965
BseDI CCNNGG 1 cut(s) 963
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 807
BseNI ACTGG 1 cut(s) 855
BseRI GAGGAG 1 cut(s) 711
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 3 cut(s) 828, 849, 882
BsgI GTGCAG 1 cut(s) 244
BshFI GGCC 2 cut(s) 355, 760
BsiHKAI GWGCWC 1 cut(s) 160
BslFI GGGAC 2 cut(s) 91, 644
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 2 cut(s) 90, 924
BsmFI GGGAC 2 cut(s) 91, 644
BsnI GGCC 2 cut(s) 355, 760
Bso31I GGTCTC 2 cut(s) 90, 924
Bsp1286I GDGCHC 2 cut(s) 160, 963
Bsp143I GATC 3 cut(s) 334, 385, 954
BspACI CCGC 2 cut(s) 142, 943
BspANI GGCC 2 cut(s) 355, 760
BspCNI CTCAG 1 cut(s) 808
BspLI GGNNCC 2 cut(s) 853, 941
BspMI ACCTGC 2 cut(s) 562, 811
BspPI GGATC 2 cut(s) 342, 380
BspTI CTTAAG 1 cut(s) 308
BspTNI GGTCTC 2 cut(s) 90, 924
BsrI ACTGG 1 cut(s) 855
BssECI CCNNGG 1 cut(s) 963
BssMI GATC 3 cut(s) 334, 385, 954
Bst2UI CCWGG 4 cut(s) 24, 675, 714, 965
Bst4CI ACNGT 2 cut(s) 781, 986
Bst6I CTCTTC 1 cut(s) 218
BstAFI CTTAAG 1 cut(s) 308
BstDEI CTNAG 3 cut(s) 249, 652, 816
BstEII GGTNACC 1 cut(s) 137
BstKTI GATC 3 cut(s) 337, 388, 957
BstMAI GTCTC 2 cut(s) 90, 924
BstMBI GATC 3 cut(s) 334, 385, 954
BstMWI GCNNNNNNNGC 2 cut(s) 449, 838
BstNI CCWGG 4 cut(s) 24, 675, 714, 965
BstPI GGTNACC 1 cut(s) 137
BstSCI CCNGG 4 cut(s) 22, 673, 712, 963
BstSLI GKGCMC 1 cut(s) 160
BstV1I GCAGC 3 cut(s) 828, 849, 882
BstV2I GAAGAC 1 cut(s) 237
BstX2I RGATCY 1 cut(s) 334
BstYI RGATCY 1 cut(s) 334
Bsu36I CCTNAGG 1 cut(s) 652
BsuI GTATCC 1 cut(s) 638
BsuRI GGCC 2 cut(s) 355, 760
BtsIMutI CAGTG 3 cut(s) 218, 514, 862
BveI ACCTGC 2 cut(s) 562, 811
Cfr13I GGNCC 3 cut(s) 677, 758, 986
Csp6I GTAC 1 cut(s) 551
CviAII CATG 6 cut(s) 81, 444, 632, 755, 1049, 1066
CviQI GTAC 1 cut(s) 551
DdeI CTNAG 3 cut(s) 249, 652, 816
DpnI GATC 3 cut(s) 336, 387, 956
DpnII GATC 3 cut(s) 334, 385, 954
Eam1104I CTCTTC 1 cut(s) 218
EarI CTCTTC 1 cut(s) 218
Eco24I GRGCYC 1 cut(s) 963
Eco31I GGTCTC 2 cut(s) 90, 924
Eco47I GGWCC 2 cut(s) 677, 986
Eco57I CTGAAG 4 cut(s) 222, 242, 895, 896
Eco81I CCTNAGG 1 cut(s) 652
Eco91I GGTNACC 1 cut(s) 137
EcoO65I GGTNACC 1 cut(s) 137
EcoRI GAATTC 2 cut(s) 57, 268
EcoRII CCWGG 4 cut(s) 22, 673, 712, 963
EcoT22I ATGCAT 1 cut(s) 351
EcoT38I GRGCYC 1 cut(s) 963
FaeI CATG 6 cut(s) 84, 447, 635, 758, 1052, 1069
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 2 cut(s) 91, 644
FatI CATG 6 cut(s) 80, 443, 631, 754, 1048, 1065
Fnu4HI GCNGC 3 cut(s) 842, 863, 871
FriOI GRGCYC 1 cut(s) 963
Fsp4HI GCNGC 3 cut(s) 842, 863, 871
GluI GCNGC 3 cut(s) 842, 863, 871
HaeIII GGCC 2 cut(s) 355, 760
Hin1II CATG 6 cut(s) 84, 447, 635, 758, 1052, 1069
HinfI GANTC 5 cut(s) 313, 427, 562, 657, 1070
HphI GGTGA 3 cut(s) 386, 493, 835
Hpy166II GTNNAC 2 cut(s) 158, 218
Hpy188I TCNGA 4 cut(s) 685, 787, 928, 1006
Hpy188III TCNNGA 5 cut(s) 241, 286, 424, 736, 1023
Hpy8I GTNNAC 2 cut(s) 158, 218
HpyAV CCTTC 2 cut(s) 402, 452
HpyCH4III ACNGT 2 cut(s) 781, 986
HpyCH4IV ACGT 1 cut(s) 234
HpyCH4V TGCA 9 cut(s) 158, 261, 349, 542, 577, 754, 844, 870, 1048
HpyF10VI GCNNNNNNNGC 2 cut(s) 449, 838
HpyF3I CTNAG 3 cut(s) 249, 652, 816
HpySE526I ACGT 1 cut(s) 234
Hsp92II CATG 6 cut(s) 84, 447, 635, 758, 1052, 1069
Kzo9I GATC 3 cut(s) 334, 385, 954
Lsp1109I GCAGC 3 cut(s) 828, 849, 882
LweI GCATC 2 cut(s) 336, 367
MaeII ACGT 1 cut(s) 234
MaeIII GTNAC 2 cut(s) 29, 137
MalI GATC 3 cut(s) 336, 387, 956
MboI GATC 3 cut(s) 334, 385, 954
MboII GAAGA 6 cut(s) 235, 242, 448, 716, 901, 1070
MfeI CAATTG 2 cut(s) 527, 617
MflI RGATCY 1 cut(s) 334
MhlI GDGCHC 2 cut(s) 160, 963
MluCI AATT 7 cut(s) 57, 268, 419, 502, 527, 536, 617
MlyI GAGTC 1 cut(s) 666
MnlI CCTC 6 cut(s) 219, 399, 582, 732, 732, 842
Mph1103I ATGCAT 1 cut(s) 351
MseI TTAA 4 cut(s) 41, 210, 309, 534
MslI CAYNNNNRTG 1 cut(s) 165
MspCI CTTAAG 1 cut(s) 308
MspR9I CCNGG 4 cut(s) 24, 675, 714, 965
MunI CAATTG 2 cut(s) 527, 617
MvaI CCWGG 4 cut(s) 24, 675, 714, 965
MwoI GCNNNNNNNGC 2 cut(s) 449, 838
NdeII GATC 3 cut(s) 334, 385, 954
NlaIII CATG 6 cut(s) 84, 447, 635, 758, 1052, 1069
NlaIV GGNNCC 2 cut(s) 853, 941
NmeAIII GCCGAG 1 cut(s) 344
NsiI ATGCAT 1 cut(s) 351
PaqCI CACCTGC 1 cut(s) 811
PfeI GAWTC 4 cut(s) 313, 427, 562, 1070
PfoI TCCNGGA 1 cut(s) 673
PkrI GCNGC 3 cut(s) 843, 864, 872
PleI GAGTC 1 cut(s) 665
PpsI GAGTC 1 cut(s) 665
Psp6I CCWGG 4 cut(s) 22, 673, 712, 963
PspEI GGTNACC 1 cut(s) 137
PspGI CCWGG 4 cut(s) 22, 673, 712, 963
PspN4I GGNNCC 2 cut(s) 853, 941
PspPI GGNCC 3 cut(s) 677, 758, 986
PsuI RGATCY 1 cut(s) 334
RsaI GTAC 1 cut(s) 552
RsaNI GTAC 1 cut(s) 551
RseI CAYNNNNRTG 1 cut(s) 165
SaqAI TTAA 4 cut(s) 41, 210, 309, 534
SatI GCNGC 3 cut(s) 842, 863, 871
Sau3AI GATC 3 cut(s) 334, 385, 954
Sau96I GGNCC 3 cut(s) 677, 758, 986
SchI GAGTC 1 cut(s) 666
ScrFI CCNGG 4 cut(s) 24, 675, 714, 965
SduI GDGCHC 2 cut(s) 160, 963
SfaNI GCATC 2 cut(s) 336, 367
SinI GGWCC 2 cut(s) 677, 986
SmiMI CAYNNNNRTG 1 cut(s) 165
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
Sse9I AATT 7 cut(s) 57, 268, 419, 502, 527, 536, 617
SsiI CCGC 2 cut(s) 142, 943
StyD4I CCNGG 4 cut(s) 22, 673, 712, 963
TaaI ACNGT 2 cut(s) 781, 986
TaiI ACGT 1 cut(s) 237
TaqI TCGA 3 cut(s) 285, 298, 957
TaqII GACCGA 1 cut(s) 813
TasI AATT 7 cut(s) 57, 268, 419, 502, 527, 536, 617
TfiI GAWTC 4 cut(s) 313, 427, 562, 1070
Tru1I TTAA 4 cut(s) 41, 210, 309, 534
Tru9I TTAA 4 cut(s) 41, 210, 309, 534
TscAI CASTG 3 cut(s) 225, 514, 862
TseI GCWGC 3 cut(s) 841, 862, 870
TspDTI ATGAA 5 cut(s) 17, 281, 315, 612, 723
TspRI CASTG 3 cut(s) 225, 514, 862
Vha464I CTTAAG 1 cut(s) 308
VneI GTGCAC 1 cut(s) 156
VpaK11BI GGWCC 2 cut(s) 677, 986
XapI RAATTY 3 cut(s) 57, 268, 536
Zsp2I ATGCAT 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.