FvH4_5g00370

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
261809 .. 266035
4227 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g00370.t1

Sequence Viewer

Length: 1482 bp
ATGGCGGCCCGTCTGTCTAAGCTGCTACTTCTCTTTGTAGCACTGGTTATACAAACCACTATAGGCGGAGGAGGTCGAGCCGCCGCTAGGCTCGACTTCTGGGACTCTGCTGCAATCCGGTTGCCCTCGGAGAAGGATAAGACCGAAGATGCCGTTGAACAATCCGGGACTACTTGGGCGGTTCTTGTAGCTGGGTCTAATGGATACGGAAATTACAGGCATCAGGCAGATGTTTGTCACGCATATCAGATACTGAAAAAAGGAGGGTTGAAGGAGGAGAACATAGTGGTGTTCATGTATGATGACATCGCCATGCATGAGATGAATCCCAGGAAAGGCATCATCATCAACCATCCACAAGGTCAAGATGTATACGCCGGCGTCCCTAAGGATTACACCGGGGAGCATGTAAATGCTGCGAACCTGTATGCAGTACTTCTTGGGGACAAGAAAGCTGTGAAAGGTGGAACCGGAAAGGTTGTGGCAAGCAAACCTAATGACAGGATCTTCTTATTCTACTCAGATCATGGTGGTCCTGGTGTTCTTGGAATGCCAAATATGCCTTTCCTGTATGCAATGGATTTCATTAATGTTTTGAAGAAGAAACACGCATCTGGGAGCTACAAAGAGATGGTTATATATGTAGAAGCATGTGAGAGTGGGAGCATTTTTGAAGGCATAATGCCAAGTGACCTTAACATATACGTGGCTACAGCATCAAATGCAGAGGAAAACAGCTTTGGGACTTACTGTCCAGGGATGAACCCTCCACCACCCCCTGAATACATCACTTGCTTAGGGGATTTGTACAGTGTTGCTTGGATGGAAGACAGTGAGAGACACAATCTGAAGAAAGAAACAATAAAAGAACAATACCAGACGGTAAAGGAACGGACTTCAAATTTTAATAACTACAATATTGGATCTCATGTGATGCAATATGGGAGTAAGAATCTTACAGAAGAGAAGCTCTATCTGTACCTTGGTTTTGATCCTGCCTCTGTGAACTTCCCTCCAAACAATGGTCAACTAGAACAGCACATGGAAGTTGTCAACCAGAGAGATGCAGAGATTTTCTTCATGTGGCAACTGTACAAAAGATCAGAACATGGGTCAGAAAAAAAGAGGGAGATCCTGAAGCAGATTAGAGATACAATGAACCACAGGAATCACATAGATGGAAGCATAAAATTCATAGGGACATTTCTGTATGGACCTAAGAATGGTGCTACTGTACTGAATTCCGTCAGACCACTTGGACTGCCTCTTGTGGATGACTGGGAATGCTTAAAATCCATGGTGCGAGTGTTTGAAACACACTGTGGATCGTTGACTCAGTACGGCATGAAACACATGCGAGCGTTTGCCAACATCTGCAACAGTGGTGTGTCTCAAGCCCAAATGGAGGAAGCATCTTGGGCTGCTTGTGATGGTCACGATCTGGGCCATCTGCATCCTTCAAACAAAGGTTATAGTGCTTGA

Protein Analysis

494

Amino Acids

54.92

Weight (kDa)

6.32

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C13 PF01650 58 - 329 8.3e-115 Peptidase C13 family
Legum_prodom PF20985 380 - 476 1.5e-42 Legumain, prodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015210)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62710
fragaria_vesca FvH4_5g00370
malus_domestica MD04G1082300.v1.1
prunus_persica Prupe.5G076300_v2.0.a1
pyrus_communis pycom04g07400
rosa_chinensis RchiOBHm_Chr7g0202151
rosa_laevigata RLG00000003621
rosa_multiflora Rmu_sc0000018.1_g000001 Rmu_sc0003823.1_g000019
rosa_roxburghii Rroxscaffold_3G00254800
rosa_rugosa Rorug07G0068500
rosa_samantha Rh7AG195900 Rh7BG197200 Rh7CG207000 Rh7DG202500
rosa_wichuraiana Rw7G017160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1022
AccI GTMKAC 1 cut(s) 372
AciI CCGC 5 cut(s) 5, 66, 81, 84, 179
AclWI GGATC 5 cut(s) 512, 931, 986, 1126, 1333
AcsI RAATTY 3 cut(s) 901, 1190, 1240
AcuI CTGAAG 2 cut(s) 869, 1157
AcyI GRCGYC 1 cut(s) 381
AdeI CACNNNGTG 1 cut(s) 1322
AfaI GTAC 6 cut(s) 435, 809, 980, 1094, 1236, 1340
AfiI CCNNNNNNNGG 5 cut(s) 87, 335, 1022, 1223, 1405
AgsI TTSAA 7 cut(s) 158, 271, 598, 674, 900, 1313, 1461
AhdI GACNNNNNGTC 1 cut(s) 750
AjnI CCWGG 3 cut(s) 329, 535, 754
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AluBI AGCT 6 cut(s) 22, 191, 455, 621, 738, 970
AluI AGCT 6 cut(s) 22, 191, 455, 621, 738, 970
Alw26I GTCTC 2 cut(s) 832, 1395
AlwI GGATC 5 cut(s) 512, 931, 986, 1126, 1333
AlwNI CAGNNNCTG 1 cut(s) 253
AoxI GGCC 2 cut(s) 6, 1444
ApeKI GCWGC 4 cut(s) 22, 110, 416, 1421
ApoI RAATTY 3 cut(s) 901, 1190, 1240
AseI ATTAAT 1 cut(s) 588
AspS9I GGNCC 4 cut(s) 7, 533, 1214, 1444
AsuC2I CCSGG 2 cut(s) 166, 400
AvaII GGWCC 2 cut(s) 533, 1214
AxyI CCTNAGG 1 cut(s) 387
BbsI GAAGAC 1 cut(s) 834
BbvI GCAGC 4 cut(s) 9, 97, 403, 1408
BccI CCATC 6 cut(s) 360, 625, 817, 1172, 1424, 1455
BceAI ACGGC 2 cut(s) 137, 1357
BciT130I CCWGG 3 cut(s) 331, 537, 756
BciVI GTATCC 1 cut(s) 197
BcnI CCSGG 2 cut(s) 166, 400
BcoDI GTCTC 2 cut(s) 832, 1395
BfaI CTAG 2 cut(s) 87, 1031
BfmI CTRYAG 2 cut(s) 60, 711
BfuI GTATCC 1 cut(s) 197
BisI GCNGC 7 cut(s) 6, 23, 81, 84, 111, 417, 1422
BlsI GCNGC 7 cut(s) 7, 24, 82, 85, 112, 418, 1423
BmcAI AGTACT 1 cut(s) 435
Bme1390I CCNGG 5 cut(s) 166, 331, 400, 537, 756
Bme18I GGWCC 2 cut(s) 533, 1214
BmeRI GACNNNNNGTC 1 cut(s) 750
BmgT120I GGNCC 4 cut(s) 7, 533, 1214, 1444
BmiI GGNNCC 1 cut(s) 469
BmrFI CCNGG 5 cut(s) 166, 331, 400, 537, 756
BmrI ACTGGG 1 cut(s) 1288
BmsI GCATC 9 cut(s) 139, 229, 348, 620, 725, 924, 1054, 1421, 1462
BmuI ACTGGG 1 cut(s) 1288
BpiI GAAGAC 1 cut(s) 834
Bpu10I CCTNAGC 1 cut(s) 796
BpuEI CTTGAG 1 cut(s) 1377
BpuMI CCSGG 2 cut(s) 166, 400
BsaAI YACGTR 1 cut(s) 706
BsaHI GRCGYC 1 cut(s) 381
BsaJI CCNNGG 6 cut(s) 126, 329, 399, 755, 982, 1296
BsaWI WCCGGW 2 cut(s) 117, 470
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 335, 1022, 1223, 1405
Bse118I RCCGGY 1 cut(s) 377
Bse1I ACTGG 2 cut(s) 48, 1283
Bse21I CCTNAGG 1 cut(s) 387
Bse3DI GCAATG 1 cut(s) 582
BseBI CCWGG 3 cut(s) 331, 537, 756
BseDI CCNNGG 6 cut(s) 126, 329, 399, 755, 982, 1296
BseGI GGATG 5 cut(s) 352, 765, 828, 1279, 1453
BseLI CCNNNNNNNGG 5 cut(s) 87, 335, 1022, 1223, 1405
BseMI GCAATG 1 cut(s) 582
BseMII CTCAG 2 cut(s) 534, 1349
BseNI ACTGG 2 cut(s) 48, 1283
BseRI GAGGAG 2 cut(s) 84, 290
BseXI GCAGC 4 cut(s) 9, 97, 403, 1408
BseYI CCCAGC 1 cut(s) 191
BshFI GGCC 2 cut(s) 8, 1446
BsiSI CCGG 5 cut(s) 118, 165, 378, 399, 471
BslFI GGGAC 6 cut(s) 116, 181, 368, 458, 757, 1213
BslI CCNNNNNNNGG 5 cut(s) 87, 335, 1022, 1223, 1405
BsmAI GTCTC 2 cut(s) 832, 1395
BsmFI GGGAC 6 cut(s) 116, 181, 368, 458, 757, 1213
BsmI GAATGC 2 cut(s) 555, 1289
BsnI GGCC 2 cut(s) 8, 1446
Bsp1407I TGTACA 2 cut(s) 807, 1092
Bsp143I GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
Bsp19I CCATGG 1 cut(s) 1296
BspACI CCGC 5 cut(s) 5, 66, 81, 84, 179
BspANI GGCC 2 cut(s) 8, 1446
BspCNI CTCAG 2 cut(s) 533, 1348
BspLI GGNNCC 1 cut(s) 469
BspPI GGATC 5 cut(s) 512, 931, 986, 1126, 1333
BsrDI GCAATG 1 cut(s) 582
BsrFI RCCGGY 1 cut(s) 377
BsrGI TGTACA 2 cut(s) 807, 1092
BsrI ACTGG 2 cut(s) 48, 1283
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 6 cut(s) 126, 329, 399, 755, 982, 1296
BssMI GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
BssNAI GTATAC 1 cut(s) 373
BssNI GRCGYC 1 cut(s) 381
BssT1I CCWWGG 2 cut(s) 982, 1296
Bst1107I GTATAC 1 cut(s) 373
Bst2UI CCWGG 3 cut(s) 331, 537, 756
Bst4CI ACNGT 8 cut(s) 752, 812, 833, 883, 1092, 1234, 1322, 1382
Bst6I CTCTTC 1 cut(s) 957
BstACI GRCGYC 1 cut(s) 381
BstAPI GCANNNNNTGC 1 cut(s) 722
BstAUI TGTACA 2 cut(s) 807, 1092
BstBAI YACGTR 1 cut(s) 706
BstC8I GCNNGC 3 cut(s) 379, 487, 1359
BstDEI CTNAG 6 cut(s) 18, 387, 520, 796, 1218, 1335
BstDSI CCRYGG 1 cut(s) 1296
BstF5I GGATG 5 cut(s) 352, 765, 828, 1279, 1453
BstKTI GATC 8 cut(s) 507, 526, 926, 994, 1103, 1134, 1328, 1441
BstMAI GTCTC 2 cut(s) 832, 1395
BstMBI GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
BstMWI GCNNNNNNNGC 3 cut(s) 559, 722, 1418
BstNI CCWGG 3 cut(s) 331, 537, 756
BstNSI RCATGY 3 cut(s) 410, 654, 1357
BstSCI CCNGG 5 cut(s) 164, 329, 398, 535, 754
BstSFI CTRYAG 2 cut(s) 60, 711
BstV1I GCAGC 4 cut(s) 9, 97, 403, 1408
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 3 cut(s) 504, 923, 1131
BstYI RGATCY 3 cut(s) 504, 923, 1131
BstZ17I GTATAC 1 cut(s) 373
Bsu36I CCTNAGG 1 cut(s) 387
BsuI GTATCC 1 cut(s) 197
BsuRI GGCC 2 cut(s) 8, 1446
BtgI CCRYGG 1 cut(s) 1296
BtgZI GCGATG 1 cut(s) 292
BtsCI GGATG 5 cut(s) 352, 765, 828, 1279, 1453
BtsIMutI CAGTG 5 cut(s) 41, 817, 838, 1318, 1387
Cac8I GCNNGC 3 cut(s) 379, 487, 1359
CaiI CAGNNNCTG 1 cut(s) 253
Cfr10I RCCGGY 1 cut(s) 377
Cfr13I GGNCC 4 cut(s) 7, 533, 1214, 1444
CseI GACGC 1 cut(s) 370
Csp6I GTAC 6 cut(s) 434, 808, 979, 1093, 1235, 1339
CviQI GTAC 6 cut(s) 434, 808, 979, 1093, 1235, 1339
DdeI CTNAG 6 cut(s) 18, 387, 520, 796, 1218, 1335
DpnI GATC 8 cut(s) 506, 525, 925, 993, 1102, 1133, 1327, 1440
DpnII GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
DraIII CACNNNGTG 1 cut(s) 1322
DriI GACNNNNNGTC 1 cut(s) 750
Eam1104I CTCTTC 1 cut(s) 957
Eam1105I GACNNNNNGTC 1 cut(s) 750
EarI CTCTTC 1 cut(s) 957
EciI GGCGGA 1 cut(s) 81
Eco130I CCWWGG 2 cut(s) 982, 1296
Eco47I GGWCC 2 cut(s) 533, 1214
Eco57I CTGAAG 2 cut(s) 869, 1157
Eco81I CCTNAGG 1 cut(s) 387
EcoRI GAATTC 1 cut(s) 1240
EcoRII CCWGG 3 cut(s) 329, 535, 754
EcoT14I CCWWGG 2 cut(s) 982, 1296
EcoT22I ATGCAT 1 cut(s) 318
ErhI CCWWGG 2 cut(s) 982, 1296
FaqI GGGAC 6 cut(s) 116, 181, 368, 458, 757, 1213
FblI GTMKAC 1 cut(s) 372
Fnu4HI GCNGC 7 cut(s) 6, 23, 81, 84, 111, 417, 1422
FokI GGATG 5 cut(s) 339, 772, 835, 1286, 1440
Fsp4HI GCNGC 7 cut(s) 6, 23, 81, 84, 111, 417, 1422
FspBI CTAG 2 cut(s) 87, 1031
GluI GCNGC 7 cut(s) 6, 23, 81, 84, 111, 417, 1422
GsaI CCCAGC 1 cut(s) 195
HaeIII GGCC 2 cut(s) 8, 1446
HapII CCGG 5 cut(s) 118, 165, 378, 399, 471
HgaI GACGC 1 cut(s) 370
Hin1I GRCGYC 1 cut(s) 381
HincII GTYRAC 3 cut(s) 1028, 1054, 1332
HindII GTYRAC 3 cut(s) 1028, 1054, 1332
HinfI GANTC 5 cut(s) 104, 325, 952, 1168, 1333
HpaII CCGG 5 cut(s) 118, 165, 378, 399, 471
Hpy166II GTNNAC 5 cut(s) 373, 1006, 1028, 1054, 1332
Hpy188I TCNGA 7 cut(s) 130, 249, 523, 849, 1105, 1117, 1250
Hpy188III TCNNGA 3 cut(s) 365, 1135, 1436
Hpy8I GTNNAC 5 cut(s) 373, 1006, 1028, 1054, 1332
HpyAV CCTTC 4 cut(s) 127, 265, 668, 1467
HpyCH4III ACNGT 8 cut(s) 752, 812, 833, 883, 1092, 1234, 1322, 1382
HpyCH4IV ACGT 1 cut(s) 705
HpyCH4V TGCA 9 cut(s) 113, 316, 431, 575, 725, 937, 1067, 1377, 1453
HpyF10VI GCNNNNNNNGC 3 cut(s) 559, 722, 1418
HpyF3I CTNAG 6 cut(s) 18, 387, 520, 796, 1218, 1335
HpySE526I ACGT 1 cut(s) 705
Hsp92I GRCGYC 1 cut(s) 381
KroI GCCGGC 1 cut(s) 377
KroNI GCCGGC 1 cut(s) 379
Kzo9I GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
LmnI GCTCC 3 cut(s) 403, 618, 663
Lsp1109I GCAGC 4 cut(s) 9, 97, 403, 1408
LweI GCATC 9 cut(s) 139, 229, 348, 620, 725, 924, 1054, 1421, 1462
MaeI CTAG 2 cut(s) 87, 1031
MaeII ACGT 1 cut(s) 705
MaeIII GTNAC 3 cut(s) 236, 689, 1433
MalI GATC 8 cut(s) 506, 525, 925, 993, 1102, 1133, 1327, 1440
MboI GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
MboII GAAGA 8 cut(s) 158, 499, 610, 613, 839, 862, 974, 1069
MflI RGATCY 3 cut(s) 504, 923, 1131
MluCI AATT 4 cut(s) 211, 901, 1190, 1240
MlyI GAGTC 2 cut(s) 98, 1327
Mph1103I ATGCAT 1 cut(s) 318
MreI CGCCGGCG 1 cut(s) 377
MroNI GCCGGC 1 cut(s) 377
MseI TTAA 4 cut(s) 588, 696, 906, 1289
MslI CAYNNNNRTG 5 cut(s) 287, 311, 411, 704, 1176
MspI CCGG 5 cut(s) 118, 165, 378, 399, 471
MspR9I CCNGG 5 cut(s) 166, 331, 400, 537, 756
Mva1269I GAATGC 2 cut(s) 555, 1289
MvaI CCWGG 3 cut(s) 331, 537, 756
MwoI GCNNNNNNNGC 3 cut(s) 559, 722, 1418
NaeI GCCGGC 1 cut(s) 379
NciI CCSGG 2 cut(s) 166, 400
NcoI CCATGG 1 cut(s) 1296
NdeII GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
NgoMIV GCCGGC 1 cut(s) 377
NlaIV GGNNCC 1 cut(s) 469
NmuCI GTSAC 3 cut(s) 236, 689, 1433
NsiI ATGCAT 1 cut(s) 318
NspI RCATGY 3 cut(s) 410, 654, 1357
PctI GAATGC 2 cut(s) 555, 1289
PdiI GCCGGC 1 cut(s) 379
PfeI GAWTC 3 cut(s) 325, 952, 1168
PflMI CCANNNNNTGG 1 cut(s) 1022
PfoI TCCNGGA 1 cut(s) 164
PkrI GCNGC 7 cut(s) 7, 24, 82, 85, 112, 418, 1423
PleI GAGTC 2 cut(s) 98, 1327
PpsI GAGTC 2 cut(s) 98, 1327
Ppu21I YACGTR 1 cut(s) 706
PshBI ATTAAT 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 329, 535, 754
PspFI CCCAGC 1 cut(s) 191
PspGI CCWGG 3 cut(s) 329, 535, 754
PspN4I GGNNCC 1 cut(s) 469
PspPI GGNCC 4 cut(s) 7, 533, 1214, 1444
PstNI CAGNNNCTG 1 cut(s) 253
PsuI RGATCY 3 cut(s) 504, 923, 1131
RsaI GTAC 6 cut(s) 435, 809, 980, 1094, 1236, 1340
RsaNI GTAC 6 cut(s) 434, 808, 979, 1093, 1235, 1339
RseI CAYNNNNRTG 5 cut(s) 287, 311, 411, 704, 1176
SaqAI TTAA 4 cut(s) 588, 696, 906, 1289
SatI GCNGC 7 cut(s) 6, 23, 81, 84, 111, 417, 1422
Sau3AI GATC 8 cut(s) 504, 523, 923, 991, 1100, 1131, 1325, 1438
Sau96I GGNCC 4 cut(s) 7, 533, 1214, 1444
ScaI AGTACT 1 cut(s) 435
SchI GAGTC 2 cut(s) 98, 1327
ScrFI CCNGG 5 cut(s) 166, 331, 400, 537, 756
SfaNI GCATC 9 cut(s) 139, 229, 348, 620, 725, 924, 1054, 1421, 1462
SfcI CTRYAG 2 cut(s) 60, 711
SgrAI CRCCGGYG 1 cut(s) 377
SinI GGWCC 2 cut(s) 533, 1214
SmiMI CAYNNNNRTG 5 cut(s) 287, 311, 411, 704, 1176
SmlI CTYRAG 1 cut(s) 1392
SmoI CTYRAG 1 cut(s) 1392
Sse9I AATT 4 cut(s) 211, 901, 1190, 1240
SsiI CCGC 5 cut(s) 5, 66, 81, 84, 179
SspI AATATT 1 cut(s) 919
SspMI CTAG 2 cut(s) 87, 1031
StyD4I CCNGG 5 cut(s) 164, 329, 398, 535, 754
StyI CCWWGG 2 cut(s) 982, 1296
TaaI ACNGT 8 cut(s) 752, 812, 833, 883, 1092, 1234, 1322, 1382
TaiI ACGT 1 cut(s) 708
TaqI TCGA 2 cut(s) 76, 93
TaqII GACCGA 1 cut(s) 158
TasI AATT 4 cut(s) 211, 901, 1190, 1240
TatI WGTACW 4 cut(s) 433, 807, 1092, 1234
TauI GCSGC 3 cut(s) 8, 83, 86
TfiI GAWTC 3 cut(s) 325, 952, 1168
Tru1I TTAA 4 cut(s) 588, 696, 906, 1289
Tru9I TTAA 4 cut(s) 588, 696, 906, 1289
TscAI CASTG 5 cut(s) 48, 817, 838, 1325, 1387
TseFI GTSAC 3 cut(s) 236, 689, 1433
TseI GCWGC 4 cut(s) 22, 110, 416, 1421
Tsp45I GTSAC 3 cut(s) 236, 689, 1433
TspDTI ATGAA 8 cut(s) 283, 338, 574, 776, 1069, 1172, 1183, 1361
TspGWI ACGGA 3 cut(s) 222, 907, 1234
TspRI CASTG 5 cut(s) 48, 817, 838, 1325, 1387
Van91I CCANNNNNTGG 1 cut(s) 1022
VpaK11BI GGWCC 2 cut(s) 533, 1214
VspI ATTAAT 1 cut(s) 588
XapI RAATTY 3 cut(s) 901, 1190, 1240
XceI RCATGY 3 cut(s) 410, 654, 1357
XmiI GTMKAC 1 cut(s) 372
XspI CTAG 2 cut(s) 87, 1031
ZrmI AGTACT 1 cut(s) 435
Zsp2I ATGCAT 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.