Rh7AG195900

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
17571163 .. 17574933
3771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG195900.1

Sequence Viewer

Length: 1479 bp
ATGGCGGTCCGTCTGTCTAAGCTGCTGGTTCTCTTTGTAGCACTGGTTATACAAACCACTGTAGGAGGAGGAGGTCGAGCCGCCGCTAGGCTCGACTTCTGGGACTCTGCAATCCGGTTGCCTTCGGAGAAGGATAAGACCGAAGGTACTGATAAACAATCCGGGACAACATGGGCGGTTCTCGTAGCAGGTTCAAAGGGTTATGGAAATTACAGGCATCAGGCGGATGTTTGTCACGCATATCAGATACTGAGAAAAGGAGGGCTGAAGGAGGAGAACATAGTGGTGTTCATGTATGATGACATCGCCATGCATGAGATGAATCCCAGGAAAGGCATCATCATCAACCATCCACAAGGTCATGATGTTTATGCCGGCGTCCCAAAGGATTACACCGACGCGCATGTAACTGCTGCGAACCTGTATGCAGTACTTCTTGGGGACAAGAAGGCTGTGAAAGGTGGAAGTGGGAAGGTTGTGGCTAGCAAACCTAATGACAGGATCTTCTTATTCTACTCGGATCATGGTGGTCCTGGTGTTCTTGGAATGCCAAATATGCCTTTTCTGTATGCAATGGATTTCATTAAGGTTTTGAAGAAGAAACATGCATCTGGGAGCTACAAAGAGATGGTTATATATGTAGAAGCATGTGAGAGTGGGAGCGTTTTTGAAGGAATAATGCCAAGTGACCTTAACATTTACGTGACTACAGCATCAAATGCACAGGAAAACAGCTTTGGGACTTACTGTCCTGGGATGAACCCTCCACCACCACCTGAATACATCACTTGCTTAGGGGATTTGTACAGTGTTGCTTGGATGGAGGACAGTGAGATACACAATCTGAAGAAAGAAACATTAAAACAACAATACCTGACGGTAAAGAAACGGACTTCGAATTTTAATAACTACAATATTGGATCTCATGTGATGCAATATGGAAATAAAAATCTCACAGAAGAGAAGCTCTACTTGTACCTTGGTTTTGATCCTGCCTCTGCGAACTTCCCTCCAAACAATGGTCAACTAGAACAGCACATGGAAGTTGTCAACCAGAGAGATGCAGAGATTTTCTTCATGTGGCAATTGTACAAAAGATCAGAACACGGGTCAGAAAAGAAGAGGAAAATCCTGAAACAGATTAGAGAAATTATGAAGCACAGGAATCACATAGATGGAAGCATAAAATTCATAGGGACATTTCTCTATGGACCTGAGAACGGTGCTACACTGCTCAATTTCGTCAGACCACTTGGTCTGCCTCTTGTGGATGACTGGGAATGCTTAAAATCCATGGTGCGAGTGTTTGAAACACATTGTGGGTCACTGACTCAGTATGGCATGAAACACATGCGTGCATTTGCCAACATCTGCAACAGTGGTGTATCTCAAGCCCAAATGGAGGAAGCATCTTGGGCTGCTTGTGATGGTCATGATCTGGGCCGACTGCATCCTTCAAACAAAGGCTATAGTGCTTGA

Protein Analysis

492

Amino Acids

54.96

Weight (kDa)

8.23

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C13 PF01650 57 - 328 1.3e-114 Peptidase C13 family
Legum_prodom PF20985 379 - 475 6.9e-42 Legumain, prodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015210)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62710
fragaria_vesca FvH4_5g00370
malus_domestica MD04G1082300.v1.1
prunus_persica Prupe.5G076300_v2.0.a1
pyrus_communis pycom04g07400
rosa_chinensis RchiOBHm_Chr7g0202151
rosa_laevigata RLG00000003621
rosa_multiflora Rmu_sc0000018.1_g000001 Rmu_sc0003823.1_g000019
rosa_roxburghii Rroxscaffold_3G00254800
rosa_rugosa Rorug07G0068500
rosa_samantha Rh7AG195900 Rh7BG197200 Rh7CG207000 Rh7DG202500
rosa_wichuraiana Rw7G017160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1254
Acc36I ACCTGC 1 cut(s) 179
AccB7I CCANNNNNTGG 1 cut(s) 1019
AccII CGCG 1 cut(s) 401
AciI CCGC 5 cut(s) 5, 81, 84, 176, 224
AclWI GGATC 4 cut(s) 509, 528, 928, 983
AcsI RAATTY 2 cut(s) 898, 1187
AcuI CTGAAG 2 cut(s) 287, 866
AcyI GRCGYC 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 1319
AfaI GTAC 5 cut(s) 148, 432, 806, 977, 1091
AfiI CCNNNNNNNGG 5 cut(s) 87, 332, 1019, 1220, 1402
AgsI TTSAA 5 cut(s) 195, 595, 671, 1310, 1458
AhdI GACNNNNNGTC 1 cut(s) 747
AjnI CCWGG 3 cut(s) 326, 532, 751
AjuI GAANNNNNNNTTGG 2 cut(s) 720, 752
AleI CACNNNNGTG 1 cut(s) 1353
AluBI AGCT 4 cut(s) 22, 618, 735, 967
AluI AGCT 4 cut(s) 22, 618, 735, 967
AlwI GGATC 4 cut(s) 509, 528, 928, 983
AlwNI CAGNNNCTG 1 cut(s) 250
AoxI GGCC 1 cut(s) 1441
ApeKI GCWGC 3 cut(s) 22, 413, 1418
ApoI RAATTY 2 cut(s) 898, 1187
AspLEI GCGC 1 cut(s) 403
AspS9I GGNCC 4 cut(s) 7, 530, 1211, 1441
AsuC2I CCSGG 1 cut(s) 163
AsuII TTCGAA 1 cut(s) 896
AsuNHI GCTAGC 1 cut(s) 482
AvaII GGWCC 3 cut(s) 7, 530, 1211
BbvI GCAGC 3 cut(s) 9, 400, 1405
BccI CCATC 5 cut(s) 357, 622, 814, 1169, 1421
BciT130I CCWGG 3 cut(s) 328, 534, 753
BcnI CCSGG 1 cut(s) 163
BfaI CTAG 3 cut(s) 87, 483, 1028
BfmI CTRYAG 3 cut(s) 60, 708, 1468
BfuAI ACCTGC 1 cut(s) 179
BisI GCNGC 5 cut(s) 23, 81, 84, 414, 1419
BlsI GCNGC 5 cut(s) 24, 82, 85, 415, 1420
BmcAI AGTACT 1 cut(s) 432
Bme1390I CCNGG 4 cut(s) 163, 328, 534, 753
Bme18I GGWCC 3 cut(s) 7, 530, 1211
BmeRI GACNNNNNGTC 1 cut(s) 747
BmgT120I GGNCC 4 cut(s) 7, 530, 1211, 1441
BmrFI CCNGG 4 cut(s) 163, 328, 534, 753
BmrI ACTGGG 1 cut(s) 1285
BmsI GCATC 8 cut(s) 226, 345, 617, 722, 921, 1051, 1418, 1459
BmtI GCTAGC 1 cut(s) 486
BmuI ACTGGG 1 cut(s) 1285
Bpu10I CCTNAGC 1 cut(s) 793
Bpu14I TTCGAA 1 cut(s) 896
BpuEI CTTGAG 1 cut(s) 1374
BpuMI CCSGG 1 cut(s) 163
BsaAI YACGTR 1 cut(s) 703
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 4 cut(s) 326, 752, 979, 1293
BsaWI WCCGGW 1 cut(s) 114
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 332, 1019, 1220, 1402
Bse118I RCCGGY 1 cut(s) 374
Bse1I ACTGG 2 cut(s) 48, 1280
Bse3DI GCAATG 1 cut(s) 579
BseBI CCWGG 3 cut(s) 328, 534, 753
BseDI CCNNGG 4 cut(s) 326, 752, 979, 1293
BseGI GGATG 6 cut(s) 232, 349, 762, 825, 1276, 1450
BseLI CCNNNNNNNGG 5 cut(s) 87, 332, 1019, 1220, 1402
BseMI GCAATG 1 cut(s) 579
BseMII CTCAG 3 cut(s) 242, 1206, 1346
BseNI ACTGG 2 cut(s) 48, 1280
BseRI GAGGAG 3 cut(s) 81, 84, 287
BseXI GCAGC 3 cut(s) 9, 400, 1405
Bsh1236I CGCG 1 cut(s) 401
BshFI GGCC 1 cut(s) 1443
BsiSI CCGG 3 cut(s) 115, 162, 375
BslFI GGGAC 6 cut(s) 116, 178, 365, 455, 754, 1210
BslI CCNNNNNNNGG 5 cut(s) 87, 332, 1019, 1220, 1402
BsmFI GGGAC 6 cut(s) 116, 178, 365, 455, 754, 1210
BsmI GAATGC 2 cut(s) 552, 1286
BsnI GGCC 1 cut(s) 1443
Bsp119I TTCGAA 1 cut(s) 896
Bsp1407I TGTACA 2 cut(s) 804, 1089
Bsp143I GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
Bsp19I CCATGG 1 cut(s) 1293
BspACI CCGC 5 cut(s) 5, 81, 84, 176, 224
BspANI GGCC 1 cut(s) 1443
BspCNI CTCAG 3 cut(s) 243, 1207, 1345
BspFNI CGCG 1 cut(s) 401
BspHI TCATGA 2 cut(s) 361, 1432
BspMI ACCTGC 1 cut(s) 179
BspOI GCTAGC 1 cut(s) 486
BspPI GGATC 4 cut(s) 509, 528, 928, 983
BspT104I TTCGAA 1 cut(s) 896
BsrDI GCAATG 1 cut(s) 579
BsrFI RCCGGY 1 cut(s) 374
BsrGI TGTACA 2 cut(s) 804, 1089
BsrI ACTGG 2 cut(s) 48, 1280
BssAI RCCGGY 1 cut(s) 374
BssECI CCNNGG 4 cut(s) 326, 752, 979, 1293
BssMI GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
BssNI GRCGYC 1 cut(s) 378
BssT1I CCWWGG 2 cut(s) 979, 1293
Bst2UI CCWGG 3 cut(s) 328, 534, 753
Bst4CI ACNGT 7 cut(s) 61, 749, 809, 830, 880, 1223, 1379
Bst6I CTCTTC 2 cut(s) 954, 1115
BstACI GRCGYC 1 cut(s) 378
BstAPI GCANNNNNTGC 1 cut(s) 719
BstAUI TGTACA 2 cut(s) 804, 1089
BstBAI YACGTR 1 cut(s) 703
BstBI TTCGAA 1 cut(s) 896
BstC8I GCNNGC 3 cut(s) 376, 484, 1356
BstDEI CTNAG 5 cut(s) 18, 251, 793, 1215, 1332
BstDSI CCRYGG 1 cut(s) 1293
BstF5I GGATG 6 cut(s) 232, 349, 762, 825, 1276, 1450
BstFNI CGCG 1 cut(s) 401
BstHHI GCGC 1 cut(s) 403
BstKTI GATC 6 cut(s) 504, 523, 923, 991, 1100, 1438
BstMBI GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
BstMWI GCNNNNNNNGC 3 cut(s) 556, 719, 1415
BstNI CCWGG 3 cut(s) 328, 534, 753
BstNSI RCATGY 4 cut(s) 407, 608, 651, 1354
BstSCI CCNGG 4 cut(s) 161, 326, 532, 751
BstSFI CTRYAG 3 cut(s) 60, 708, 1468
BstUI CGCG 1 cut(s) 401
BstV1I GCAGC 3 cut(s) 9, 400, 1405
BstX2I RGATCY 2 cut(s) 501, 920
BstYI RGATCY 2 cut(s) 501, 920
BsuRI GGCC 1 cut(s) 1443
BtgI CCRYGG 1 cut(s) 1293
BtgZI GCGATG 1 cut(s) 289
BtsCI GGATG 6 cut(s) 232, 349, 762, 825, 1276, 1450
BtsI GCAGTG 1 cut(s) 1229
BtsIMutI CAGTG 7 cut(s) 41, 57, 814, 835, 1229, 1325, 1384
BveI ACCTGC 1 cut(s) 179
Cac8I GCNNGC 3 cut(s) 376, 484, 1356
CaiI CAGNNNCTG 1 cut(s) 250
CciI TCATGA 2 cut(s) 361, 1432
CfoI GCGC 1 cut(s) 403
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 4 cut(s) 7, 530, 1211, 1441
CpoI CGGWCCG 1 cut(s) 7
CseI GACGC 2 cut(s) 367, 407
Csp6I GTAC 5 cut(s) 147, 431, 805, 976, 1090
CspI CGGWCCG 1 cut(s) 7
CviQI GTAC 5 cut(s) 147, 431, 805, 976, 1090
DdeI CTNAG 5 cut(s) 18, 251, 793, 1215, 1332
DpnI GATC 6 cut(s) 503, 522, 922, 990, 1099, 1437
DpnII GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
DraIII CACNNNGTG 1 cut(s) 1319
DrdI GACNNNNNNGTC 1 cut(s) 1254
DriI GACNNNNNGTC 1 cut(s) 747
DseDI GACNNNNNNGTC 1 cut(s) 1254
Eam1104I CTCTTC 2 cut(s) 954, 1115
Eam1105I GACNNNNNGTC 1 cut(s) 747
EarI CTCTTC 2 cut(s) 954, 1115
EciI GGCGGA 1 cut(s) 239
Eco130I CCWWGG 2 cut(s) 979, 1293
Eco47I GGWCC 3 cut(s) 7, 530, 1211
Eco57I CTGAAG 2 cut(s) 287, 866
EcoRII CCWGG 3 cut(s) 326, 532, 751
EcoT14I CCWWGG 2 cut(s) 979, 1293
EcoT22I ATGCAT 2 cut(s) 315, 610
ErhI CCWWGG 2 cut(s) 979, 1293
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 6 cut(s) 116, 178, 365, 455, 754, 1210
Fnu4HI GCNGC 5 cut(s) 23, 81, 84, 414, 1419
FokI GGATG 6 cut(s) 239, 336, 769, 832, 1283, 1437
Fsp4HI GCNGC 5 cut(s) 23, 81, 84, 414, 1419
FspBI CTAG 3 cut(s) 87, 483, 1028
GlaI GCGC 1 cut(s) 402
GluI GCNGC 5 cut(s) 23, 81, 84, 414, 1419
HaeIII GGCC 1 cut(s) 1443
HapII CCGG 3 cut(s) 115, 162, 375
HgaI GACGC 2 cut(s) 367, 407
HhaI GCGC 1 cut(s) 403
Hin1I GRCGYC 1 cut(s) 378
Hin6I GCGC 1 cut(s) 401
HinP1I GCGC 1 cut(s) 401
HincII GTYRAC 2 cut(s) 1025, 1051
HindII GTYRAC 2 cut(s) 1025, 1051
HinfI GANTC 4 cut(s) 104, 322, 1165, 1330
HpaII CCGG 3 cut(s) 115, 162, 375
Hpy166II GTNNAC 2 cut(s) 1025, 1051
Hpy188I TCNGA 7 cut(s) 127, 246, 520, 846, 1102, 1114, 1247
Hpy188III TCNNGA 3 cut(s) 362, 1132, 1433
Hpy8I GTNNAC 2 cut(s) 1025, 1051
Hpy99I CGWCG 1 cut(s) 401
HpyAV CCTTC 8 cut(s) 124, 132, 137, 262, 442, 466, 665, 1464
HpyCH4III ACNGT 7 cut(s) 61, 749, 809, 830, 880, 1223, 1379
HpyCH4IV ACGT 1 cut(s) 702
HpyF10VI GCNNNNNNNGC 3 cut(s) 556, 719, 1415
HpyF3I CTNAG 5 cut(s) 18, 251, 793, 1215, 1332
HpySE526I ACGT 1 cut(s) 702
Hsp92I GRCGYC 1 cut(s) 378
HspAI GCGC 1 cut(s) 401
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Kzo9I GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
LmnI GCTCC 2 cut(s) 615, 660
Lsp1109I GCAGC 3 cut(s) 9, 400, 1405
LweI GCATC 8 cut(s) 226, 345, 617, 722, 921, 1051, 1418, 1459
MaeI CTAG 3 cut(s) 87, 483, 1028
MaeII ACGT 1 cut(s) 702
MaeIII GTNAC 5 cut(s) 233, 406, 686, 703, 1323
MalI GATC 6 cut(s) 503, 522, 922, 990, 1099, 1437
MboI GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
MboII GAAGA 7 cut(s) 496, 607, 610, 859, 971, 1066, 1132
MfeI CAATTG 1 cut(s) 1085
MflI RGATCY 2 cut(s) 501, 920
MluCI AATT 6 cut(s) 208, 898, 1085, 1149, 1187, 1237
MlyI GAGTC 2 cut(s) 98, 1324
Mph1103I ATGCAT 2 cut(s) 315, 610
MroNI GCCGGC 1 cut(s) 374
MseI TTAA 5 cut(s) 585, 693, 860, 903, 1286
MslI CAYNNNNRTG 5 cut(s) 284, 308, 701, 1173, 1353
MspI CCGG 3 cut(s) 115, 162, 375
MspR9I CCNGG 4 cut(s) 163, 328, 534, 753
MunI CAATTG 1 cut(s) 1085
Mva1269I GAATGC 2 cut(s) 552, 1286
MvaI CCWGG 3 cut(s) 328, 534, 753
MvnI CGCG 1 cut(s) 401
MwoI GCNNNNNNNGC 3 cut(s) 556, 719, 1415
NaeI GCCGGC 1 cut(s) 376
NciI CCSGG 1 cut(s) 163
NcoI CCATGG 1 cut(s) 1293
NdeII GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
NgoMIV GCCGGC 1 cut(s) 374
NheI GCTAGC 1 cut(s) 482
NmuCI GTSAC 4 cut(s) 233, 686, 703, 1323
NsiI ATGCAT 2 cut(s) 315, 610
NspI RCATGY 4 cut(s) 407, 608, 651, 1354
NspV TTCGAA 1 cut(s) 896
OliI CACNNNNGTG 1 cut(s) 1353
PagI TCATGA 2 cut(s) 361, 1432
PctI GAATGC 2 cut(s) 552, 1286
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 2 cut(s) 322, 1165
PflMI CCANNNNNTGG 1 cut(s) 1019
PfoI TCCNGGA 1 cut(s) 161
PkrI GCNGC 5 cut(s) 24, 82, 85, 415, 1420
PleI GAGTC 2 cut(s) 98, 1324
PpsI GAGTC 2 cut(s) 98, 1324
Ppu21I YACGTR 1 cut(s) 703
Psp6I CCWGG 3 cut(s) 326, 532, 751
PspGI CCWGG 3 cut(s) 326, 532, 751
PspPI GGNCC 4 cut(s) 7, 530, 1211, 1441
PstNI CAGNNNCTG 1 cut(s) 250
PsuI RGATCY 2 cut(s) 501, 920
RsaI GTAC 5 cut(s) 148, 432, 806, 977, 1091
RsaNI GTAC 5 cut(s) 147, 431, 805, 976, 1090
RseI CAYNNNNRTG 5 cut(s) 284, 308, 701, 1173, 1353
Rsr2I CGGWCCG 1 cut(s) 7
RsrII CGGWCCG 1 cut(s) 7
SaqAI TTAA 5 cut(s) 585, 693, 860, 903, 1286
SatI GCNGC 5 cut(s) 23, 81, 84, 414, 1419
Sau3AI GATC 6 cut(s) 501, 520, 920, 988, 1097, 1435
Sau96I GGNCC 4 cut(s) 7, 530, 1211, 1441
ScaI AGTACT 1 cut(s) 432
SchI GAGTC 2 cut(s) 98, 1324
ScrFI CCNGG 4 cut(s) 163, 328, 534, 753
SfaNI GCATC 8 cut(s) 226, 345, 617, 722, 921, 1051, 1418, 1459
SfcI CTRYAG 3 cut(s) 60, 708, 1468
SfuI TTCGAA 1 cut(s) 896
SinI GGWCC 3 cut(s) 7, 530, 1211
SmiMI CAYNNNNRTG 5 cut(s) 284, 308, 701, 1173, 1353
SmlI CTYRAG 1 cut(s) 1389
SmoI CTYRAG 1 cut(s) 1389
Sse9I AATT 6 cut(s) 208, 898, 1085, 1149, 1187, 1237
SsiI CCGC 5 cut(s) 5, 81, 84, 176, 224
SspI AATATT 1 cut(s) 916
SspMI CTAG 3 cut(s) 87, 483, 1028
StyD4I CCNGG 4 cut(s) 161, 326, 532, 751
StyI CCWWGG 2 cut(s) 979, 1293
TaaI ACNGT 7 cut(s) 61, 749, 809, 830, 880, 1223, 1379
TaiI ACGT 1 cut(s) 705
TaqI TCGA 3 cut(s) 76, 93, 896
TaqII GACCGA 1 cut(s) 155
TasI AATT 6 cut(s) 208, 898, 1085, 1149, 1187, 1237
TatI WGTACW 3 cut(s) 430, 804, 1089
TauI GCSGC 2 cut(s) 83, 86
TfiI GAWTC 2 cut(s) 322, 1165
Tru1I TTAA 5 cut(s) 585, 693, 860, 903, 1286
Tru9I TTAA 5 cut(s) 585, 693, 860, 903, 1286
TscAI CASTG 7 cut(s) 48, 64, 814, 835, 1236, 1332, 1384
TseFI GTSAC 4 cut(s) 233, 686, 703, 1323
TseI GCWGC 3 cut(s) 22, 413, 1418
Tsp45I GTSAC 4 cut(s) 233, 686, 703, 1323
TspDTI ATGAA 8 cut(s) 280, 335, 571, 773, 1066, 1169, 1180, 1358
TspGWI ACGGA 1 cut(s) 904
TspRI CASTG 7 cut(s) 48, 64, 814, 835, 1236, 1332, 1384
Van91I CCANNNNNTGG 1 cut(s) 1019
VpaK11BI GGWCC 3 cut(s) 7, 530, 1211
XapI RAATTY 2 cut(s) 898, 1187
XceI RCATGY 4 cut(s) 407, 608, 651, 1354
XspI CTAG 3 cut(s) 87, 483, 1028
ZrmI AGTACT 1 cut(s) 432
Zsp2I ATGCAT 2 cut(s) 315, 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.