Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0015857

Physical Location & Seq

Genomic Coordinates Forward (+)

374844 .. 377989

Gene Structure 3146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g00620.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGTCACAGCTGAAGCCAATTTCGCACCTTGACAACATACCCTCCACCCCCGGAAAGTTCAAGCTGGAGAAATCCCAACCCTACATTCACCGCCTCCGGTTCCACGCGTCGCTCTCCAAGCTCACCCTCTGGTCCTCCTTCTTCCTCGTCTTCATTCTCTTCTACTACGTCCTCTCCCCTCCGTCGCCGTCGCTCCCTTCCCGCCGCGCCCTCAACGACTCCTCCTGGGGCGGCCCCGATTGGGAGAAGCGCGTCACCCGCTCCGCCAGAACCTCCCCTCATGGCCTCACCGTCCTCGTCACCGGCGCCGCCGGCTTCGTCGGCACCCACGTCTCCATGGCCCTCAAGCGCCGCGGCGACGGCGTCCTCGGAATCGACAATTTCAACCACTACTACGACCCCCGCCTGAAGCGCGATCGCCAGAAGCTTCTCGAACGCAACGGCGTGTTCGTCGTGGAAGGGGACATAAACGACGCGCCGTTGCTCAGGAAGCTCTTCGACGTCGTGCCGTTTACTCACGTGATGCACCTGGCGGCTCAGGCCGGGGTTCGTTACGCAATGCAGAACCCGGGGAGTTATGTCCACAGCAACATTGCCGGGTTTGTGAGTCTTCTTGAAGTTTGCAAATCGGTGAATCCGCAGCCGGCGATTGTCTGGGCCTCGTCGAGTTCGGTTTATGGGCTCAATTCCAAGGTGCCCTTTTCGGAGAAGGACAGGACTGACCAGCCGGCCAGTCTTTATGCCGCTACAAAGAAGGCTGGAGAGGAGATTGCTCATACTTACAATCACATTTACGGCCTTTCGATTACTGGCTTGAGGTTCTTCACTGTTTACGGGCCGTGGGGGAGGCCTGACATGGCTTACTTTTTCTTCACTAAGGATATTCTGAAAGGGAAGCCGATTACGATCTTTGAAGCCCCTGGACATGGCTCTGTGGCCAGAGATTTTACCTACATTGATGACATTGTGAAGGGTTGTGTGGCGTCGTTGGATACAGCCAAGAAGAGTACAGGGAGCGGTGGGAAGAAGAAGGGTCCTGCGCAGTTGAGGGTGATCAATTTGGGAAACACATCGCCTGTGCCGGTGAGTAATCTTGTGAGCATTTTGGAGAAGCATTTGAAGGTTAAGGCGAAAAGGAAGGTGTTGCCAATGCCGAGGAATGGGGATGTGAGATTCACACATGCCAATATAAGCTTAGCACACAAGGAGCTCAGGTACAAGCCTACCACTGATTTGGAGACAGGGCTGAAGAAGTTTGTCAAGTGGTACCTCACTCATTACTCGGGGTCTAAGAAGAAGATTAGTGCCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0012505 GO:0016020 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

438

Amino Acids

48.67

Weight (kDa)

9.97

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	97 - 279	1.8e-12	RmlD substrate binding domain
Epimerase	PF01370	98 - 334	8.6e-51	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	98 - 304	8.3e-08	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	99 - 418	1.1e-47	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	99 - 328	2.4e-14	3-beta hydroxysteroid dehydrogenase/isomerase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45310 AT4G12250
fragaria_vesca	FvH4_5g00620
prunus_persica	Prupe.5G079000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0201641
rosa_laevigata	RLG00000003659
rosa_multiflora	Rmu_sc0031046.1_g000001 Rmu_sc0031047.1_g000001
rosa_roxburghii	Rroxscaffold_3G00255170
rosa_rugosa	Rorug07G0065300
rosa_samantha	Rh7AG192100 Rh7BG194300 Rh7CG203400 Rh7DG197400
rosa_wichuraiana	Rw7G016850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	504
Acc16I	TGCGCA	1 cut(s)	1041
Acc65I	GGTACC	1 cut(s)	1266
AccB1I	GGYRCC	4 cut(s)	305, 323, 694, 1266
AccBSI	CCGCTC	2 cut(s)	261, 1017
AccII	CGCG	6 cut(s)	107, 207, 252, 354, 414, 476
AcoI	YGGCCR	2 cut(s)	729, 936
AcuI	CTGAAG	3 cut(s)	32, 428, 1268
AcvI	CACGTG	1 cut(s)	520
AcyI	GRCGYC	4 cut(s)	306, 363, 501, 983
AfaI	GTAC	3 cut(s)	1009, 1217, 1268
AfiI	CCNNNNNNNGG	3 cut(s)	241, 926, 1160
AflIII	ACRYGT	1 cut(s)	105
AgsI	TTSAA	5 cut(s)	61, 385, 617, 914, 1120
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	4 cut(s)	224, 528, 919, 1307
AjuI	GAANNNNNNNTTGG	2 cut(s)	69, 101
AluBI	AGCT	7 cut(s)	10, 64, 121, 427, 493, 1194, 1210
AluI	AGCT	7 cut(s)	10, 64, 121, 427, 493, 1194, 1210
Alw21I	GWGCWC	1 cut(s)	1212
Alw26I	GTCTC	2 cut(s)	337, 1232
Ama87I	CYCGRG	2 cut(s)	568, 1282
ApeKI	GCWGC	1 cut(s)	640
AsiSI	GCGATCGC	1 cut(s)	418
Asp700I	GAANNNNTTC	1 cut(s)	494
Asp718I	GGTACC	1 cut(s)	1266
AspLEI	GCGC	7 cut(s)	209, 252, 308, 351, 414, 478, 1042
AspS9I	GGNCC	6 cut(s)	132, 233, 340, 657, 836, 1034
AsuC2I	CCSGG	5 cut(s)	51, 544, 569, 570, 598
AsuHPI	GGTGA	8 cut(s)	80, 115, 247, 280, 292, 643, 1063, 1096
AvaI	CYCGRG	2 cut(s)	568, 1282
AvaII	GGWCC	2 cut(s)	132, 1034
BaeGI	GKGCMC	1 cut(s)	699
BalI	TGGCCA	1 cut(s)	938
BanI	GGYRCC	4 cut(s)	305, 323, 694, 1266
BanII	GRGCYC	2 cut(s)	684, 1212
BbrPI	CACGTG	1 cut(s)	520
BbsI	GAAGAC	2 cut(s)	142, 602
Bbv12I	GWGCWC	1 cut(s)	1212
BbvI	GCAGC	1 cut(s)	652
BceAI	ACGGC	7 cut(s)	172, 376, 457, 463, 493, 811, 823
BciT130I	CCWGG	4 cut(s)	226, 530, 921, 1309
BciVI	GTATCC	1 cut(s)	985
BclI	TGATCA	1 cut(s)	1053
BcnI	CCSGG	5 cut(s)	51, 544, 569, 570, 598
BcoDI	GTCTC	2 cut(s)	337, 1232
BfoI	RGCGCY	2 cut(s)	309, 352
BfuI	GTATCC	1 cut(s)	985
BisI	GCNGC	8 cut(s)	205, 232, 309, 352, 355, 534, 641, 744
BlpI	GCTNAGC	1 cut(s)	1195
BlsI	GCNGC	8 cut(s)	206, 233, 310, 353, 356, 535, 642, 745
Bme1390I	CCNGG	9 cut(s)	51, 226, 530, 544, 569, 570, 598, 921, 1309
Bme18I	GGWCC	2 cut(s)	132, 1034
BmeT110I	CYCGRG	2 cut(s)	568, 1282
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	6 cut(s)	132, 233, 340, 657, 836, 1034
BmiI	GGNNCC	7 cut(s)	101, 235, 307, 325, 696, 1035, 1268
BmrFI	CCNGG	9 cut(s)	51, 226, 530, 544, 569, 570, 598, 921, 1309
BmsI	GCATC	1 cut(s)	513
BpiI	GAAGAC	2 cut(s)	142, 602
BpmI	CTGGAG	2 cut(s)	86, 780
Bpu10I	CCTNAGC	3 cut(s)	485, 537, 1211
Bpu1102I	GCTNAGC	1 cut(s)	1195
BpuEI	CTTGAG	2 cut(s)	329, 835
BpuMI	CCSGG	5 cut(s)	51, 544, 569, 570, 598
BsaAI	YACGTR	1 cut(s)	520
BsaBI	GATNNNNATC	1 cut(s)	905
BsaHI	GRCGYC	4 cut(s)	306, 363, 501, 983
BsaWI	WCCGGW	1 cut(s)	96
BsaXI	ACNNNNNCTCC	8 cut(s)	26, 56, 158, 188, 206, 236, 1199, 1229
Bsc4I	CCNNNNNNNGG	3 cut(s)	241, 926, 1160
Bse118I	RCCGGY	5 cut(s)	302, 311, 643, 727, 1081
Bse1I	ACTGG	2 cut(s)	732, 814
Bse3DI	GCAATG	2 cut(s)	564, 591
Bse8I	GATNNNNATC	1 cut(s)	905
BseBI	CCWGG	4 cut(s)	226, 530, 921, 1309
BseGI	GGATG	1 cut(s)	1171
BseJI	GATNNNNATC	1 cut(s)	905
BseLI	CCNNNNNNNGG	3 cut(s)	241, 926, 1160
BseMI	GCAATG	2 cut(s)	564, 591
BseMII	CTCAG	3 cut(s)	499, 551, 1225
BseNI	ACTGG	2 cut(s)	732, 814
BseRI	GAGGAG	2 cut(s)	211, 779
BseSI	GKGCMC	1 cut(s)	699
BseXI	GCAGC	1 cut(s)	652
Bsh1236I	CGCG	6 cut(s)	107, 207, 252, 354, 414, 476
Bsh1285I	CGRYCG	1 cut(s)	418
BshNI	GGYRCC	4 cut(s)	305, 323, 694, 1266
BsiEI	CGRYCG	1 cut(s)	418
BsiHKAI	GWGCWC	1 cut(s)	1212
BsiHKCI	CYCGRG	2 cut(s)	568, 1282
BslFI	GGGAC	1 cut(s)	476
BslI	CCNNNNNNNGG	3 cut(s)	241, 926, 1160
BsmAI	GTCTC	2 cut(s)	337, 1232
BsmBI	CGTCTC	1 cut(s)	337
BsmFI	GGGAC	1 cut(s)	476
BsoBI	CYCGRG	2 cut(s)	568, 1282
Bsp1286I	GDGCHC	3 cut(s)	684, 699, 1212
Bsp143I	GATC	3 cut(s)	415, 906, 1053
Bsp1720I	GCTNAGC	1 cut(s)	1195
Bsp19I	CCATGG	1 cut(s)	336
BspCNI	CTCAG	3 cut(s)	498, 550, 1224
BspFNI	CGCG	6 cut(s)	107, 207, 252, 354, 414, 476
BspLI	GGNNCC	7 cut(s)	101, 235, 307, 325, 696, 1035, 1268
BspQI	GCTCTTC	1 cut(s)	500
BspT107I	GGYRCC	4 cut(s)	305, 323, 694, 1266
BsrBI	CCGCTC	2 cut(s)	261, 1017
BsrDI	GCAATG	2 cut(s)	564, 591
BsrFI	RCCGGY	5 cut(s)	302, 311, 643, 727, 1081
BsrI	ACTGG	2 cut(s)	732, 814
BssAI	RCCGGY	5 cut(s)	302, 311, 643, 727, 1081
BssMI	GATC	3 cut(s)	415, 906, 1053
BssNI	GRCGYC	4 cut(s)	306, 363, 501, 983
BssT1I	CCWWGG	2 cut(s)	336, 690
Bst2UI	CCWGG	4 cut(s)	226, 530, 921, 1309
Bst4CI	ACNGT	2 cut(s)	292, 829
Bst6I	CTCTTC	3 cut(s)	164, 500, 998
BstACI	GRCGYC	4 cut(s)	306, 363, 501, 983
BstBAI	YACGTR	1 cut(s)	520
BstC8I	GCNNGC	3 cut(s)	313, 645, 729
BstDEI	CTNAG	6 cut(s)	485, 537, 876, 1195, 1211, 1290
BstDSI	CCRYGG	3 cut(s)	336, 352, 839
BstF5I	GGATG	1 cut(s)	1171
BstFNI	CGCG	6 cut(s)	107, 207, 252, 354, 414, 476
BstH2I	RGCGCY	2 cut(s)	309, 352
BstHHI	GCGC	7 cut(s)	209, 252, 308, 351, 414, 478, 1042
BstKTI	GATC	3 cut(s)	418, 909, 1056
BstMAI	GTCTC	2 cut(s)	337, 1232
BstMBI	GATC	3 cut(s)	415, 906, 1053
BstMCI	CGRYCG	1 cut(s)	418
BstMWI	GCNNNNNNNGC	9 cut(s)	22, 118, 258, 312, 321, 360, 411, 490, 539
BstNI	CCWGG	4 cut(s)	226, 530, 921, 1309
BstNSI	RCATGY	1 cut(s)	1184
BstSCI	CCNGG	9 cut(s)	49, 224, 528, 542, 567, 568, 596, 919, 1307
BstSLI	GKGCMC	1 cut(s)	699
BstUI	CGCG	6 cut(s)	107, 207, 252, 354, 414, 476
BstV1I	GCAGC	1 cut(s)	652
BstV2I	GAAGAC	2 cut(s)	142, 602
BstXI	CCANNNNNNTGG	1 cut(s)	1234
BsuI	GTATCC	1 cut(s)	985
BtgI	CCRYGG	3 cut(s)	336, 352, 839
BtgZI	GCGATG	1 cut(s)	1056
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	1 cut(s)	1171
BtsIMutI	CAGTG	2 cut(s)	825, 1227
Cac8I	GCNNGC	3 cut(s)	313, 645, 729
CfoI	GCGC	7 cut(s)	209, 252, 308, 351, 414, 478, 1042
Cfr10I	RCCGGY	5 cut(s)	302, 311, 643, 727, 1081
Cfr13I	GGNCC	6 cut(s)	132, 233, 340, 657, 836, 1034
Cfr42I	CCGCGG	1 cut(s)	355
Cfr9I	CCCGGG	1 cut(s)	568
CseI	GACGC	5 cut(s)	96, 241, 352, 482, 972
Csp6I	GTAC	3 cut(s)	1008, 1216, 1267
CviAII	CATG	5 cut(s)	281, 337, 856, 926, 1181
CviQI	GTAC	3 cut(s)	1008, 1216, 1267
DdeI	CTNAG	6 cut(s)	485, 537, 876, 1195, 1211, 1290
DinI	GGCGCC	1 cut(s)	307
DpnI	GATC	3 cut(s)	417, 908, 1055
DpnII	GATC	3 cut(s)	415, 906, 1053
EaeI	YGGCCR	2 cut(s)	729, 936
Eam1104I	CTCTTC	3 cut(s)	164, 500, 998
EarI	CTCTTC	3 cut(s)	164, 500, 998
EciI	GGCGGA	1 cut(s)	253
Ecl136II	GAGCTC	1 cut(s)	1210
Eco130I	CCWWGG	2 cut(s)	336, 690
Eco147I	AGGCCT	1 cut(s)	850
Eco24I	GRGCYC	2 cut(s)	684, 1212
Eco47I	GGWCC	2 cut(s)	132, 1034
Eco53kI	GAGCTC	1 cut(s)	1210
Eco57I	CTGAAG	3 cut(s)	32, 428, 1268
Eco72I	CACGTG	1 cut(s)	520
Eco88I	CYCGRG	2 cut(s)	568, 1282
EcoICRI	GAGCTC	1 cut(s)	1210
EcoO109I	RGGNCCY	1 cut(s)	1034
EcoRII	CCWGG	4 cut(s)	224, 528, 919, 1307
EcoT14I	CCWWGG	2 cut(s)	336, 690
EcoT38I	GRGCYC	2 cut(s)	684, 1212
EgeI	GGCGCC	1 cut(s)	307
EheI	GGCGCC	1 cut(s)	307
ErhI	CCWWGG	2 cut(s)	336, 690
Esp3I	CGTCTC	1 cut(s)	337
FaeI	CATG	5 cut(s)	284, 340, 859, 929, 1184
FalI	AAGNNNNNCTT	2 cut(s)	683, 715
FaqI	GGGAC	1 cut(s)	476
FatI	CATG	5 cut(s)	280, 336, 855, 925, 1180
FauI	CCCGC	3 cut(s)	209, 266, 410
FbaI	TGATCA	1 cut(s)	1053
Fnu4HI	GCNGC	8 cut(s)	205, 232, 309, 352, 355, 534, 641, 744
FokI	GGATG	1 cut(s)	1178
FriOI	GRGCYC	2 cut(s)	684, 1212
Fsp4HI	GCNGC	8 cut(s)	205, 232, 309, 352, 355, 534, 641, 744
FspI	TGCGCA	1 cut(s)	1041
GlaI	GCGC	7 cut(s)	208, 251, 307, 350, 413, 477, 1041
GluI	GCNGC	8 cut(s)	205, 232, 309, 352, 355, 534, 641, 744
GsuI	CTGGAG	2 cut(s)	86, 780
HaeII	RGCGCY	2 cut(s)	309, 352
HgaI	GACGC	5 cut(s)	96, 241, 352, 482, 972
HhaI	GCGC	7 cut(s)	209, 252, 308, 351, 414, 478, 1042
Hin1I	GRCGYC	4 cut(s)	306, 363, 501, 983
Hin1II	CATG	5 cut(s)	284, 340, 859, 929, 1184
Hin6I	GCGC	7 cut(s)	207, 250, 306, 349, 412, 476, 1040
HinP1I	GCGC	7 cut(s)	207, 250, 306, 349, 412, 476, 1040
HindIII	AAGCTT	2 cut(s)	425, 1192
HinfI	GANTC	5 cut(s)	218, 372, 607, 634, 1173
HphI	GGTGA	8 cut(s)	80, 115, 247, 280, 292, 643, 1063, 1096
Hpy166II	GTNNAC	3 cut(s)	513, 583, 832
Hpy188I	TCNGA	3 cut(s)	371, 706, 888
Hpy188III	TCNNGA	3 cut(s)	431, 487, 614
Hpy8I	GTNNAC	3 cut(s)	513, 583, 832
HpyAV	CCTTC	9 cut(s)	148, 207, 452, 703, 748, 964, 1024, 1114, 1132
HpyCH4III	ACNGT	2 cut(s)	292, 829
HpyCH4IV	ACGT	4 cut(s)	168, 330, 501, 519
HpyCH4V	TGCA	3 cut(s)	526, 562, 624
HpyF10VI	GCNNNNNNNGC	9 cut(s)	22, 118, 258, 312, 321, 360, 411, 490, 539
HpyF3I	CTNAG	6 cut(s)	485, 537, 876, 1195, 1211, 1290
HpySE526I	ACGT	4 cut(s)	168, 330, 501, 519
Hsp92I	GRCGYC	4 cut(s)	306, 363, 501, 983
Hsp92II	CATG	5 cut(s)	284, 340, 859, 929, 1184
HspAI	GCGC	7 cut(s)	207, 250, 306, 349, 412, 476, 1040
KasI	GGCGCC	1 cut(s)	305
KpnI	GGTACC	1 cut(s)	1270
KroI	GCCGGC	3 cut(s)	311, 643, 727
KroNI	GCCGGC	3 cut(s)	313, 645, 729
Ksp22I	TGATCA	1 cut(s)	1053
KspI	CCGCGG	1 cut(s)	355
Kzo9I	GATC	3 cut(s)	415, 906, 1053
LguI	GCTCTTC	1 cut(s)	500
LmnI	GCTCC	4 cut(s)	198, 266, 1014, 1207
Lsp1109I	GCAGC	1 cut(s)	652
LweI	GCATC	1 cut(s)	513
MaeII	ACGT	4 cut(s)	168, 330, 501, 519
MaeIII	GTNAC	4 cut(s)	3, 253, 298, 551
MalI	GATC	3 cut(s)	417, 908, 1055
MbiI	CCGCTC	2 cut(s)	261, 1017
MboI	GATC	3 cut(s)	415, 906, 1053
MhlI	GDGCHC	3 cut(s)	684, 699, 1212
MlsI	TGGCCA	1 cut(s)	938
MluCI	AATT	4 cut(s)	18, 379, 685, 1057
MluI	ACGCGT	1 cut(s)	105
MluNI	TGGCCA	1 cut(s)	938
Mly113I	GGCGCC	1 cut(s)	306
MlyI	GAGTC	2 cut(s)	212, 616
MmeI	TCCRAC	1 cut(s)	969
Mox20I	TGGCCA	1 cut(s)	938
MroNI	GCCGGC	3 cut(s)	311, 643, 727
MroXI	GAANNNNTTC	1 cut(s)	494
MscI	TGGCCA	1 cut(s)	938
MseI	TTAA	1 cut(s)	1125
Msp20I	TGGCCA	1 cut(s)	938
MspA1I	CMGCKG	2 cut(s)	10, 354
MspR9I	CCNGG	9 cut(s)	51, 226, 530, 544, 569, 570, 598, 921, 1309
MvaI	CCWGG	4 cut(s)	226, 530, 921, 1309
MvnI	CGCG	6 cut(s)	107, 207, 252, 354, 414, 476
MwoI	GCNNNNNNNGC	9 cut(s)	22, 118, 258, 312, 321, 360, 411, 490, 539
NaeI	GCCGGC	3 cut(s)	313, 645, 729
NarI	GGCGCC	1 cut(s)	306
NciI	CCSGG	5 cut(s)	51, 544, 569, 570, 598
NcoI	CCATGG	1 cut(s)	336
NdeII	GATC	3 cut(s)	415, 906, 1053
NgoMIV	GCCGGC	3 cut(s)	311, 643, 727
NlaIII	CATG	5 cut(s)	284, 340, 859, 929, 1184
NlaIV	GGNNCC	7 cut(s)	101, 235, 307, 325, 696, 1035, 1268
NmeAIII	GCCGAG	1 cut(s)	1179
NmuCI	GTSAC	3 cut(s)	3, 253, 298
NsbI	TGCGCA	1 cut(s)	1041
NspI	RCATGY	1 cut(s)	1184
PceI	AGGCCT	1 cut(s)	850
PciSI	GCTCTTC	1 cut(s)	500
PcsI	WCGNNNNNNNCGW	2 cut(s)	327, 447
PdiI	GCCGGC	3 cut(s)	313, 645, 729
PdmI	GAANNNNTTC	1 cut(s)	494
PfeI	GAWTC	3 cut(s)	372, 634, 1173
PflFI	GACNNNGTC	1 cut(s)	362
PkrI	GCNGC	8 cut(s)	206, 233, 310, 353, 356, 535, 642, 745
Ple19I	CGATCG	1 cut(s)	418
PleI	GAGTC	2 cut(s)	212, 615
PluTI	GGCGCC	1 cut(s)	309
PmaCI	CACGTG	1 cut(s)	520
PmlI	CACGTG	1 cut(s)	520
PpsI	GAGTC	2 cut(s)	212, 615
Ppu21I	YACGTR	1 cut(s)	520
PpuMI	RGGWCCY	1 cut(s)	1034
Psp124BI	GAGCTC	1 cut(s)	1212
Psp5II	RGGWCCY	1 cut(s)	1034
Psp6I	CCWGG	4 cut(s)	224, 528, 919, 1307
PspCI	CACGTG	1 cut(s)	520
PspGI	CCWGG	4 cut(s)	224, 528, 919, 1307
PspN4I	GGNNCC	7 cut(s)	101, 235, 307, 325, 696, 1035, 1268
PspPI	GGNCC	6 cut(s)	132, 233, 340, 657, 836, 1034
PspPPI	RGGWCCY	1 cut(s)	1034
PsyI	GACNNNGTC	1 cut(s)	362
PvuI	CGATCG	1 cut(s)	418
PvuII	CAGCTG	1 cut(s)	10
RgaI	GCGATCGC	1 cut(s)	418
RsaI	GTAC	3 cut(s)	1009, 1217, 1268
RsaNI	GTAC	3 cut(s)	1008, 1216, 1267
SacI	GAGCTC	1 cut(s)	1212
SacII	CCGCGG	1 cut(s)	355
SapI	GCTCTTC	1 cut(s)	500
SaqAI	TTAA	1 cut(s)	1125
SatI	GCNGC	8 cut(s)	205, 232, 309, 352, 355, 534, 641, 744
Sau3AI	GATC	3 cut(s)	415, 906, 1053
Sau96I	GGNCC	6 cut(s)	132, 233, 340, 657, 836, 1034
SchI	GAGTC	2 cut(s)	212, 616
ScrFI	CCNGG	9 cut(s)	51, 226, 530, 544, 569, 570, 598, 921, 1309
SduI	GDGCHC	3 cut(s)	684, 699, 1212
SfaAI	GCGATCGC	1 cut(s)	418
SfaNI	GCATC	1 cut(s)	513
SfoI	GGCGCC	1 cut(s)	307
Sfr303I	CCGCGG	1 cut(s)	355
SgfI	GCGATCGC	1 cut(s)	418
SgrAI	CRCCGGYG	1 cut(s)	302
SgrBI	CCGCGG	1 cut(s)	355
SinI	GGWCC	2 cut(s)	132, 1034
SmaI	CCCGGG	1 cut(s)	570
SmlI	CTYRAG	2 cut(s)	344, 814
SmoI	CTYRAG	2 cut(s)	344, 814
Sse9I	AATT	4 cut(s)	18, 379, 685, 1057
SseBI	AGGCCT	1 cut(s)	850
SspDI	GGCGCC	1 cut(s)	305
SstI	GAGCTC	1 cut(s)	1212
StuI	AGGCCT	1 cut(s)	850
StyD4I	CCNGG	9 cut(s)	49, 224, 528, 542, 567, 568, 596, 919, 1307
StyI	CCWWGG	2 cut(s)	336, 690
TaaI	ACNGT	2 cut(s)	292, 829
TaiI	ACGT	4 cut(s)	171, 333, 504, 522
TaqI	TCGA	5 cut(s)	375, 432, 498, 665, 803
TasI	AATT	4 cut(s)	18, 379, 685, 1057
TatI	WGTACW	1 cut(s)	1007
TauI	GCSGC	7 cut(s)	207, 234, 311, 354, 357, 536, 746
TfiI	GAWTC	3 cut(s)	372, 634, 1173
Tru1I	TTAA	1 cut(s)	1125
Tru9I	TTAA	1 cut(s)	1125
TscAI	CASTG	2 cut(s)	832, 1234
TseFI	GTSAC	3 cut(s)	3, 253, 298
TseI	GCWGC	1 cut(s)	640
Tsp45I	GTSAC	3 cut(s)	3, 253, 298
TspDTI	ATGAA	1 cut(s)	142
TspGWI	ACGGA	1 cut(s)	171
TspMI	CCCGGG	1 cut(s)	568
TspRI	CASTG	2 cut(s)	832, 1234
Tth111I	GACNNNGTC	1 cut(s)	362
VpaK11BI	GGWCC	2 cut(s)	132, 1034
XceI	RCATGY	1 cut(s)	1184
XmaI	CCCGGG	1 cut(s)	568
XmnI	GAANNNNTTC	1 cut(s)	494
ZraI	GACGTC	1 cut(s)	502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.