Rorug07G0065300

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
4950363 .. 4955982
5620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0065300.1

Sequence Viewer

Length: 1761 bp
ATGGCTATGGTGGATGAGCCTCTATACCCAATTGCTGTTTTGATCGATGAGCTCAAGAACGAAGACATTCAACTGCGATTGAACTCAATCCGCAGGCTCTCGACCATTGCTCGTGCATTGGGGGAGGACAGGACCAGGAAGGAACTGATTCCTTTCCTGAGCGAGAACAATGACGACGACGATGAGGTGCTTCTTGCAATGGCAGAGGAATTGGGGGTGTTTGTCCCCTATGTCGGCGGTGTAGAGCATGCCAATATTCTGCTCCCACCGTTGGAAACTCTATGCACCGTTGAGGAAACATGTGTGAGGGACAAGGCAGTGGAGTCATTGGGTAGGATTGGGGCGCAGATGAGGGAGCAGGACTTGGTTGAGTATTTCGTCCCTTTGGTCAAGAGGCTGGCTGCTGGCGAGTGGTTTACGGCTCGCGTTTCATCATGTGGTTTGTTTCATATTGCTTACTCTAGTGCCCCCGAGTCTATAAAAACTGAACTTCGAACTATATACAATCAATTGTGCCAAGATGACATGCCCATGGTTAGAAGATCTGCTGCAACTAACCTGGGAAAATTTGCTGCGACTGTTGAAGCTGCCCACCTCAAAACTGAGGTCATGTCTATATTTGAGGATTTGACACAGGATGATCAAGATTCTGTTCGGTTATTGGCTGTCGAGGGTTGTGCAGCTCTTGGGAAGTTGTTGGAACCTCAAGATTGTGTTGCCCATATTCTTCCTGTCATTGTCAATTTTTCACAGGATAAGTCATGGCGTGTTCGTTACATGGTTGCAAATCAATTATACGAGCTGTGTGAAGCTGTTGGCCCAGAAGCCACCAGGTCAGACCTGGTGCCTGCCTATGTTCGTCTTCTTCGCGATAATGAGGCTGAGGTGCGGATTGCTGCTGCAGGAAAAGTAACCAAGTTTTGCCGAATTTTGGACCCAGAACTTGCTGTTCAGCAAATCCTACCATTTGTAAAGGAATTGTCAACAGATTCGTCCCAGCACGTTCGCTCTGCATTAGCTTCAGTGATAATGGGAATGGCACCAGTTTTAGGAAAGGATGCAACCATAGAGCAACTGCTGCCTATTTTCCTTTCTCTTCTCAAAGATGAGTTTCCAGATGTCCGGCTGAACATTATCAGCAAGCTTGATCAAGTCAACCAGGTAATTGGAATTGATCTGCTGTCCCAGTCTCTACTGCCAGCAATTGTGGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCAATAATAGAATATATCCCTTTATTGGCAAGTCAGTTGGGTGTGGGGTTTTTCGATGATAAGCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATACGTGATGCAGCTGCTAATAATGTGAAGCGCCTTGCAGAAGAATTTGGCCCTGATTGGGCCATGCAGCATATAGTCCCACAGGTTTTGGAAATGATTAACAACCCTCACTATTTGTATCGGATGACGATTCTACATGCAATTTCCCTACTTGCCCCTGTTATGGGATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTTATCACCGCATCAAAAGATAGGGTTCCAAACATCAAGTTCAATGTCGCCAAGGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGATGATTCGTCCCTGTTTGGTTGAGCTCAGTGAAGATCCAGACGTTGATGTAAGATCTTTTGCGACCCAAGCGCTACAGTCAAGTGACGTCATGATGTCTATCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

65.36

Weight (kDa)

4.85

Isoelectric Point (pI)

48.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS15-like_hel PF22956 195 - 309 1.3e-08 VPS15-like, helical domain
PPP2R1A-like_HEAT PF22646 274 - 351 2.6e-29 PPP2R1A-like HEAT repeat
TPR_DNAAF5 PF25757 275 - 458 7.6e-06 Dynein axonemal assembly factor 5-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1746
AccB1I GGYRCC 2 cut(s) 844, 1039
AccII CGCG 2 cut(s) 426, 870
AciI CCGC 4 cut(s) 91, 237, 889, 1563
AclWI GGATC 2 cut(s) 1528, 1685
AcsI RAATTY 3 cut(s) 566, 927, 1397
AcuI CTGAAG 1 cut(s) 1005
AcyI GRCGYC 1 cut(s) 1743
AfeI AGCGCT 1 cut(s) 1728
AfiI CCNNNNNNNGG 8 cut(s) 233, 271, 931, 1049, 1270, 1411, 1516, 1517
AflIII ACRYGT 1 cut(s) 299
AgeI ACCGGT 1 cut(s) 1549
AgsI TTSAA 4 cut(s) 71, 82, 584, 1597
AjnI CCWGG 5 cut(s) 134, 558, 830, 840, 1158
Alw21I GWGCWC 2 cut(s) 54, 1683
Alw26I GTCTC 1 cut(s) 1194
AlwI GGATC 2 cut(s) 1528, 1685
Ama87I CYCGRG 1 cut(s) 470
Aor51HI AGCGCT 1 cut(s) 1728
AoxI GGCC 3 cut(s) 817, 1402, 1413
ApoI RAATTY 3 cut(s) 566, 927, 1397
ArsI GACNNNNNNTTYG 2 cut(s) 591, 623
AsiGI ACCGGT 1 cut(s) 1549
Asp700I GAANNNNTTC 2 cut(s) 66, 147
AspLEI GCGC 3 cut(s) 346, 1386, 1729
AspS9I GGNCC 5 cut(s) 132, 818, 934, 1403, 1413
AsuHPI GGTGA 1 cut(s) 1552
AsuII TTCGAA 1 cut(s) 493
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 2 cut(s) 132, 934
BaeGI GKGCMC 1 cut(s) 469
BanI GGYRCC 2 cut(s) 844, 1039
BanII GRGCYC 2 cut(s) 54, 1683
BauI CACGAG 1 cut(s) 111
BbsI GAAGAC 2 cut(s) 69, 854
Bbv12I GWGCWC 2 cut(s) 54, 1683
BbvCI CCTCAGC 1 cut(s) 882
BceAI ACGGC 1 cut(s) 435
BcgI CGANNNNNNTGC 2 cut(s) 659, 693
BciT130I CCWGG 5 cut(s) 136, 560, 832, 842, 1160
BclI TGATCA 3 cut(s) 640, 1147, 1636
BcoDI GTCTC 1 cut(s) 1194
BfaI CTAG 2 cut(s) 462, 1759
BfmI CTRYAG 3 cut(s) 900, 1629, 1730
BfoI RGCGCY 2 cut(s) 1387, 1730
BglII AGATCT 2 cut(s) 542, 1709
Bme1390I CCNGG 5 cut(s) 136, 560, 832, 842, 1160
Bme18I GGWCC 2 cut(s) 132, 934
BmeT110I CYCGRG 1 cut(s) 470
BmgT120I GGNCC 5 cut(s) 132, 818, 934, 1403, 1413
BmiI GGNNCC 5 cut(s) 702, 846, 936, 1041, 1581
BmrFI CCNGG 5 cut(s) 136, 560, 832, 842, 1160
BmrI ACTGGG 1 cut(s) 1180
BmsI GCATC 3 cut(s) 1048, 1351, 1574
BmuI ACTGGG 1 cut(s) 1180
BpiI GAAGAC 2 cut(s) 69, 854
Bpu10I CCTNAGC 2 cut(s) 158, 882
Bpu14I TTCGAA 1 cut(s) 493
BpuEI CTTGAG 2 cut(s) 38, 690
Bsa29I ATCGAT 1 cut(s) 45
BsaAI YACGTR 1 cut(s) 1358
BsaBI GATNNNNATC 1 cut(s) 1754
BsaHI GRCGYC 1 cut(s) 1743
BsaJI CCNNGG 3 cut(s) 531, 559, 1605
BsaWI WCCGGW 1 cut(s) 1549
Bsc4I CCNNNNNNNGG 8 cut(s) 233, 271, 931, 1049, 1270, 1411, 1516, 1517
Bse118I RCCGGY 1 cut(s) 1549
Bse1I ACTGG 3 cut(s) 1043, 1186, 1218
Bse3DI GCAATG 2 cut(s) 105, 204
Bse8I GATNNNNATC 1 cut(s) 1754
BseBI CCWGG 5 cut(s) 136, 560, 832, 842, 1160
BseCI ATCGAT 1 cut(s) 45
BseDI CCNNGG 3 cut(s) 531, 559, 1605
BseGI GGATG 4 cut(s) 19, 643, 1063, 1482
BseJI GATNNNNATC 1 cut(s) 1754
BseLI CCNNNNNNNGG 8 cut(s) 233, 271, 931, 1049, 1270, 1411, 1516, 1517
BseMI GCAATG 2 cut(s) 105, 204
BseMII CTCAG 4 cut(s) 149, 594, 873, 1696
BseNI ACTGG 3 cut(s) 1043, 1186, 1218
BseSI GKGCMC 1 cut(s) 469
BseYI CCCAGC 1 cut(s) 996
BsgI GTGCAG 1 cut(s) 699
Bsh1236I CGCG 2 cut(s) 426, 870
BshFI GGCC 3 cut(s) 819, 1404, 1415
BshNI GGYRCC 2 cut(s) 844, 1039
BshTI ACCGGT 1 cut(s) 1549
BshVI ATCGAT 1 cut(s) 45
BsiHKAI GWGCWC 2 cut(s) 54, 1683
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 2 cut(s) 1123, 1550
BslFI GGGAC 7 cut(s) 209, 323, 365, 979, 1168, 1415, 1650
BslI CCNNNNNNNGG 8 cut(s) 233, 271, 931, 1049, 1270, 1411, 1516, 1517
BsmAI GTCTC 1 cut(s) 1194
BsmFI GGGAC 7 cut(s) 209, 323, 365, 979, 1168, 1415, 1650
BsnI GGCC 3 cut(s) 819, 1404, 1415
BsoBI CYCGRG 1 cut(s) 470
Bsp119I TTCGAA 1 cut(s) 493
Bsp1286I GDGCHC 3 cut(s) 54, 469, 1683
Bsp143I GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
Bsp19I CCATGG 1 cut(s) 531
Bsp68I TCGCGA 1 cut(s) 870
BspACI CCGC 4 cut(s) 91, 237, 889, 1563
BspANI GGCC 3 cut(s) 819, 1404, 1415
BspCNI CTCAG 4 cut(s) 150, 595, 874, 1695
BspDI ATCGAT 1 cut(s) 45
BspFNI CGCG 2 cut(s) 426, 870
BspHI TCATGA 1 cut(s) 1746
BspLI GGNNCC 5 cut(s) 702, 846, 936, 1041, 1581
BspMAI CTGCAG 1 cut(s) 904
BspPI GGATC 2 cut(s) 1528, 1685
BspT104I TTCGAA 1 cut(s) 493
BspT107I GGYRCC 2 cut(s) 844, 1039
BsrDI GCAATG 2 cut(s) 105, 204
BsrFI RCCGGY 1 cut(s) 1549
BsrI ACTGG 3 cut(s) 1043, 1186, 1218
BssAI RCCGGY 1 cut(s) 1549
BssECI CCNNGG 3 cut(s) 531, 559, 1605
BssMI GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
BssNI GRCGYC 1 cut(s) 1743
BssSI CACGAG 1 cut(s) 111
BssT1I CCWWGG 2 cut(s) 531, 1605
Bst2BI CACGAG 1 cut(s) 111
Bst2UI CCWGG 5 cut(s) 136, 560, 832, 842, 1160
Bst4CI ACNGT 4 cut(s) 270, 289, 580, 1734
Bst6I CTCTTC 1 cut(s) 1101
BstACI GRCGYC 1 cut(s) 1743
BstAPI GCANNNNNTGC 1 cut(s) 1078
BstBAI YACGTR 1 cut(s) 1358
BstBI TTCGAA 1 cut(s) 493
BstDEI CTNAG 4 cut(s) 158, 603, 882, 1682
BstDSI CCRYGG 1 cut(s) 531
BstF5I GGATG 4 cut(s) 19, 643, 1063, 1482
BstFNI CGCG 2 cut(s) 426, 870
BstH2I RGCGCY 2 cut(s) 1387, 1730
BstHHI GCGC 3 cut(s) 346, 1386, 1729
BstKTI GATC 9 cut(s) 45, 545, 643, 1150, 1177, 1523, 1639, 1693, 1712
BstMAI GTCTC 1 cut(s) 1194
BstMBI GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
BstMWI GCNNNNNNNGC 2 cut(s) 1078, 1724
BstNI CCWGG 5 cut(s) 136, 560, 832, 842, 1160
BstNSI RCATGY 5 cut(s) 251, 303, 529, 1327, 1493
BstSCI CCNGG 5 cut(s) 134, 558, 830, 840, 1158
BstSFI CTRYAG 3 cut(s) 900, 1629, 1730
BstSLI GKGCMC 1 cut(s) 469
BstUI CGCG 2 cut(s) 426, 870
BstV2I GAAGAC 2 cut(s) 69, 854
BstX2I RGATCY 3 cut(s) 542, 1690, 1709
BstXI CCANNNNNNTGG 1 cut(s) 1166
BstYI RGATCY 3 cut(s) 542, 1690, 1709
Bsu15I ATCGAT 1 cut(s) 45
BsuRI GGCC 3 cut(s) 819, 1404, 1415
BsuTUI ATCGAT 1 cut(s) 45
BtgI CCRYGG 1 cut(s) 531
BtsCI GGATG 4 cut(s) 19, 643, 1063, 1482
BtsI GCAGTG 2 cut(s) 324, 1334
BtsIMutI CAGTG 4 cut(s) 324, 1029, 1334, 1690
BtuMI TCGCGA 1 cut(s) 870
CciI TCATGA 1 cut(s) 1746
CfoI GCGC 3 cut(s) 346, 1386, 1729
Cfr10I RCCGGY 1 cut(s) 1549
Cfr13I GGNCC 5 cut(s) 132, 818, 934, 1403, 1413
ClaI ATCGAT 1 cut(s) 45
CsiI ACCWGGT 3 cut(s) 830, 840, 1158
CspAI ACCGGT 1 cut(s) 1549
CspCI CAANNNNNGTGG 2 cut(s) 1422, 1457
DdeI CTNAG 4 cut(s) 158, 603, 882, 1682
DpnI GATC 9 cut(s) 44, 544, 642, 1149, 1176, 1522, 1638, 1692, 1711
DpnII GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
Eam1104I CTCTTC 1 cut(s) 1101
EarI CTCTTC 1 cut(s) 1101
Ecl136II GAGCTC 2 cut(s) 52, 1681
Eco130I CCWWGG 2 cut(s) 531, 1605
Eco24I GRGCYC 2 cut(s) 54, 1683
Eco47I GGWCC 2 cut(s) 132, 934
Eco47III AGCGCT 1 cut(s) 1728
Eco53kI GAGCTC 2 cut(s) 52, 1681
Eco57I CTGAAG 1 cut(s) 1005
Eco88I CYCGRG 1 cut(s) 470
EcoICRI GAGCTC 2 cut(s) 52, 1681
EcoRII CCWGG 5 cut(s) 134, 558, 830, 840, 1158
EcoT14I CCWWGG 2 cut(s) 531, 1605
EcoT38I GRGCYC 2 cut(s) 54, 1683
ErhI CCWWGG 2 cut(s) 531, 1605
FaqI GGGAC 7 cut(s) 209, 323, 365, 979, 1168, 1415, 1650
FbaI TGATCA 3 cut(s) 640, 1147, 1636
FokI GGATG 4 cut(s) 26, 650, 1070, 1489
FriOI GRGCYC 2 cut(s) 54, 1683
FspBI CTAG 2 cut(s) 462, 1759
GlaI GCGC 3 cut(s) 345, 1385, 1728
GsaI CCCAGC 1 cut(s) 1000
HaeII RGCGCY 2 cut(s) 1387, 1730
HaeIII GGCC 3 cut(s) 819, 1404, 1415
HapII CCGG 2 cut(s) 1123, 1550
HhaI GCGC 3 cut(s) 346, 1386, 1729
Hin1I GRCGYC 1 cut(s) 1743
Hin6I GCGC 3 cut(s) 344, 1384, 1727
HinP1I GCGC 3 cut(s) 344, 1384, 1727
HincII GTYRAC 2 cut(s) 984, 1156
HindII GTYRAC 2 cut(s) 984, 1156
HindIII AAGCTT 2 cut(s) 1142, 1307
HinfI GANTC 7 cut(s) 148, 323, 473, 647, 989, 1483, 1660
HpaII CCGG 2 cut(s) 1123, 1550
HphI GGTGA 1 cut(s) 1552
Hpy166II GTNNAC 4 cut(s) 417, 984, 1156, 1348
Hpy188I TCNGA 3 cut(s) 838, 1476, 1525
Hpy8I GTNNAC 4 cut(s) 417, 984, 1156, 1348
Hpy99I CGWCG 2 cut(s) 179, 182
HpyAV CCTTC 1 cut(s) 133
HpyCH4III ACNGT 4 cut(s) 270, 289, 580, 1734
HpyCH4IV ACGT 4 cut(s) 1002, 1357, 1698, 1743
HpyF10VI GCNNNNNNNGC 2 cut(s) 1078, 1724
HpyF3I CTNAG 4 cut(s) 158, 603, 882, 1682
HpySE526I ACGT 4 cut(s) 1002, 1357, 1698, 1743
Hsp92I GRCGYC 1 cut(s) 1743
HspAI GCGC 3 cut(s) 344, 1384, 1727
Ksp22I TGATCA 3 cut(s) 640, 1147, 1636
Kzo9I GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
LmnI GCTCC 2 cut(s) 267, 355
LweI GCATC 3 cut(s) 1048, 1351, 1574
MabI ACCWGGT 3 cut(s) 830, 840, 1158
MaeI CTAG 2 cut(s) 462, 1759
MaeII ACGT 4 cut(s) 1002, 1357, 1698, 1743
MaeIII GTNAC 4 cut(s) 773, 910, 1617, 1739
MalI GATC 9 cut(s) 44, 544, 642, 1149, 1176, 1522, 1638, 1692, 1711
MboI GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
MboII GAAGA 9 cut(s) 74, 552, 719, 854, 857, 1088, 1406, 1666, 1700
MfeI CAATTG 3 cut(s) 30, 509, 1203
MflI RGATCY 3 cut(s) 542, 1690, 1709
MhlI GDGCHC 3 cut(s) 54, 469, 1683
MlyI GAGTC 2 cut(s) 332, 482
MmeI TCCRAC 2 cut(s) 252, 678
MroXI GAANNNNTTC 2 cut(s) 66, 147
MseI TTAA 2 cut(s) 1334, 1452
MslI CAYNNNNRTG 1 cut(s) 530
MspA1I CMGCKG 1 cut(s) 1367
MspI CCGG 2 cut(s) 1123, 1550
MspR9I CCNGG 5 cut(s) 136, 560, 832, 842, 1160
MunI CAATTG 3 cut(s) 30, 509, 1203
MvaI CCWGG 5 cut(s) 136, 560, 832, 842, 1160
MvnI CGCG 2 cut(s) 426, 870
MwoI GCNNNNNNNGC 2 cut(s) 1078, 1724
NcoI CCATGG 1 cut(s) 531
NdeII GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
NlaIV GGNNCC 5 cut(s) 702, 846, 936, 1041, 1581
NmuCI GTSAC 2 cut(s) 1617, 1739
NruI TCGCGA 1 cut(s) 870
NspI RCATGY 5 cut(s) 251, 303, 529, 1327, 1493
NspV TTCGAA 1 cut(s) 493
PaeI GCATGC 2 cut(s) 251, 1327
PagI TCATGA 1 cut(s) 1746
PciI ACATGT 1 cut(s) 299
PdmI GAANNNNTTC 2 cut(s) 66, 147
PfeI GAWTC 5 cut(s) 148, 647, 989, 1483, 1660
PinAI ACCGGT 1 cut(s) 1549
PleI GAGTC 2 cut(s) 331, 481
PpsI GAGTC 2 cut(s) 331, 481
Ppu21I YACGTR 1 cut(s) 1358
PscI ACATGT 1 cut(s) 299
Psp124BI GAGCTC 2 cut(s) 54, 1683
Psp6I CCWGG 5 cut(s) 134, 558, 830, 840, 1158
PspFI CCCAGC 1 cut(s) 996
PspGI CCWGG 5 cut(s) 134, 558, 830, 840, 1158
PspN4I GGNNCC 5 cut(s) 702, 846, 936, 1041, 1581
PspPI GGNCC 5 cut(s) 132, 818, 934, 1403, 1413
PstI CTGCAG 1 cut(s) 904
PsuI RGATCY 3 cut(s) 542, 1690, 1709
PvuII CAGCTG 1 cut(s) 1367
RruI TCGCGA 1 cut(s) 870
RseI CAYNNNNRTG 1 cut(s) 530
SacI GAGCTC 2 cut(s) 54, 1683
SaqAI TTAA 2 cut(s) 1334, 1452
Sau3AI GATC 9 cut(s) 42, 542, 640, 1147, 1174, 1520, 1636, 1690, 1709
Sau96I GGNCC 5 cut(s) 132, 818, 934, 1403, 1413
SchI GAGTC 2 cut(s) 332, 482
ScrFI CCNGG 5 cut(s) 136, 560, 832, 842, 1160
SduI GDGCHC 3 cut(s) 54, 469, 1683
SexAI ACCWGGT 3 cut(s) 830, 840, 1158
SfaNI GCATC 3 cut(s) 1048, 1351, 1574
SfcI CTRYAG 3 cut(s) 900, 1629, 1730
SfuI TTCGAA 1 cut(s) 493
SinI GGWCC 2 cut(s) 132, 934
SmiMI CAYNNNNRTG 1 cut(s) 530
SmlI CTYRAG 2 cut(s) 53, 705
SmoI CTYRAG 2 cut(s) 53, 705
SphI GCATGC 2 cut(s) 251, 1327
SsiI CCGC 4 cut(s) 91, 237, 889, 1563
SspI AATATT 1 cut(s) 256
SspMI CTAG 2 cut(s) 462, 1759
SstI GAGCTC 2 cut(s) 54, 1683
StyD4I CCNGG 5 cut(s) 134, 558, 830, 840, 1158
StyI CCWWGG 2 cut(s) 531, 1605
TaaI ACNGT 4 cut(s) 270, 289, 580, 1734
TaiI ACGT 4 cut(s) 1005, 1360, 1701, 1746
TaqI TCGA 5 cut(s) 45, 101, 493, 669, 1299
TfiI GAWTC 5 cut(s) 148, 647, 989, 1483, 1660
Tru1I TTAA 2 cut(s) 1334, 1452
Tru9I TTAA 2 cut(s) 1334, 1452
TscAI CASTG 4 cut(s) 324, 1029, 1334, 1690
TseFI GTSAC 2 cut(s) 1617, 1739
Tsp45I GTSAC 2 cut(s) 1617, 1739
TspDTI ATGAA 2 cut(s) 420, 437
TspRI CASTG 4 cut(s) 324, 1029, 1334, 1690
VpaK11BI GGWCC 2 cut(s) 132, 934
XapI RAATTY 3 cut(s) 566, 927, 1397
XceI RCATGY 5 cut(s) 251, 303, 529, 1327, 1493
XcmI CCANNNNNNNNNTGG 1 cut(s) 838
XmnI GAANNNNTTC 2 cut(s) 66, 147
XspI CTAG 2 cut(s) 462, 1759
ZraI GACGTC 1 cut(s) 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.