Rorug07G0065900

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
4998913 .. 5000654
1742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0065900.1

Sequence Viewer

Length: 708 bp
ATGGATAACAGTAACCCTAATGGGAAGAGACCCCGAGATGATGATTCGGCCGACTCGGGACGGAACGAGGCTGCAGAGTTTCGTCCCGAGTCGAAACTCATCCGAGTTGATTCCAGCAGCTCAATTAACTCGGATGCAAGCTCGGGCGACTCCAACGTCCGAGTTGACTCGGACGAGTTCGACATGGACTCGGCCGAGGCGAAGATGATTCAGGAAGACCTGTTGAACATACTGGACGACTCGGAGGCCGTGACGGACCCTGACCCAGCAATTCAGGGGCTGGACTCGGTCATTAAAAGCTTCGAGGAGGAGATACAAGTTCCGGCAGCACCGGCATTTGCTCCTCCGGTTGAAACGACCTCGGGCTCGGGAGAGTCCTCCCCGTCGTCGCAGCCGGAGCTCGGTTACTTACTGGAGGCTTCGGACGACGAGCTTGGTCTCCCGCCGACGAACAATGGAGCTGCGAGCGAGGAGAAGAAAATGGAGGCGGCGGATTTCACAGTGAGTCCTCCGGCGGCCGCATTGGATGGAATGCTTGGGTTCGAGAACGACATGATTCCGAGTTACGACGCTTTCGATTTCGGAATCGGTGGGTACTCGGAGAGTAATGGAGGCGGAGAGTACGTGGCGTTGGGTGGCTTGTTTGACAACTCGGACGGCGGCACTACGGAGGTGTCGTGGCGGACGGAGTCGCTTTCTGCTCTATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

235

Amino Acids

24.68

Weight (kDa)

4.05

Isoelectric Point (pI)

57.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 155
AciI CCGC 8 cut(s) 443, 488, 491, 515, 519, 615, 660, 682
AcoI YGGCCR 3 cut(s) 48, 192, 516
AfaI GTAC 2 cut(s) 596, 623
AfiI CCNNNNNNNGG 1 cut(s) 401
AgsI TTSAA 2 cut(s) 226, 353
AluBI AGCT 6 cut(s) 120, 141, 300, 400, 433, 461
AluI AGCT 6 cut(s) 120, 141, 300, 400, 433, 461
Alw21I GWGCWC 1 cut(s) 402
Alw26I GTCTC 2 cut(s) 22, 443
AlwNI CAGNNNCTG 1 cut(s) 280
Ama87I CYCGRG 6 cut(s) 33, 55, 86, 142, 361, 367
AoxI GGCC 4 cut(s) 48, 192, 246, 516
ApeKI GCWGC 5 cut(s) 71, 117, 326, 391, 461
AspS9I GGNCC 1 cut(s) 256
AvaI CYCGRG 6 cut(s) 33, 55, 86, 142, 361, 367
AvaII GGWCC 1 cut(s) 256
BanII GRGCYC 2 cut(s) 368, 402
BbsI GAAGAC 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 402
BbvI GCAGC 5 cut(s) 58, 129, 338, 403, 448
BccI CCATC 1 cut(s) 521
BceAI ACGGC 2 cut(s) 233, 673
BcoDI GTCTC 2 cut(s) 22, 443
BfmI CTRYAG 2 cut(s) 72, 704
BisI GCNGC 9 cut(s) 72, 118, 327, 392, 462, 489, 516, 519, 661
BlsI GCNGC 9 cut(s) 73, 119, 328, 393, 463, 490, 517, 520, 662
Bme18I GGWCC 1 cut(s) 256
BmeT110I CYCGRG 6 cut(s) 33, 55, 86, 142, 361, 367
BmgT120I GGNCC 1 cut(s) 256
BmiI GGNNCC 1 cut(s) 258
BmsI GCATC 1 cut(s) 124
BpiI GAAGAC 1 cut(s) 222
BpmI CTGGAG 1 cut(s) 434
BsaAI YACGTR 1 cut(s) 625
BsaI GGTCTC 2 cut(s) 22, 443
BsaJI CCNNGG 2 cut(s) 195, 360
BsaWI WCCGGW 1 cut(s) 346
BsaXI ACNNNNNCTCC 4 cut(s) 609, 639, 662, 692
Bsc4I CCNNNNNNNGG 1 cut(s) 401
Bse118I RCCGGY 1 cut(s) 331
Bse1I ACTGG 2 cut(s) 237, 417
BseDI CCNNGG 2 cut(s) 195, 360
BseGI GGATG 3 cut(s) 99, 139, 532
BseLI CCNNNNNNNGG 1 cut(s) 401
BseNI ACTGG 2 cut(s) 237, 417
BseRI GAGGAG 4 cut(s) 320, 323, 333, 485
BseX3I CGGCCG 3 cut(s) 48, 192, 516
BseXI GCAGC 5 cut(s) 58, 129, 338, 403, 448
BseYI CCCAGC 1 cut(s) 265
Bsh1285I CGRYCG 3 cut(s) 51, 195, 519
BshFI GGCC 4 cut(s) 50, 194, 248, 518
BsiEI CGRYCG 3 cut(s) 51, 195, 519
BsiHKAI GWGCWC 1 cut(s) 402
BsiHKCI CYCGRG 6 cut(s) 33, 55, 86, 142, 361, 367
BsiSI CCGG 5 cut(s) 323, 332, 347, 395, 512
BslFI GGGAC 2 cut(s) 69, 72
BslI CCNNNNNNNGG 1 cut(s) 401
BsmAI GTCTC 2 cut(s) 22, 443
BsmFI GGGAC 2 cut(s) 69, 72
BsmI GAATGC 1 cut(s) 537
BsnI GGCC 4 cut(s) 50, 194, 248, 518
Bso31I GGTCTC 2 cut(s) 22, 443
BsoBI CYCGRG 6 cut(s) 33, 55, 86, 142, 361, 367
Bsp1286I GDGCHC 2 cut(s) 368, 402
BspACI CCGC 8 cut(s) 443, 488, 491, 515, 519, 615, 660, 682
BspANI GGCC 4 cut(s) 50, 194, 248, 518
BspLI GGNNCC 1 cut(s) 258
BspMAI CTGCAG 1 cut(s) 76
BspTNI GGTCTC 2 cut(s) 22, 443
BsrFI RCCGGY 1 cut(s) 331
BsrI ACTGG 2 cut(s) 237, 417
BssAI RCCGGY 1 cut(s) 331
BssECI CCNNGG 2 cut(s) 195, 360
Bst4CI ACNGT 2 cut(s) 11, 502
Bst6I CTCTTC 1 cut(s) 20
BstBAI YACGTR 1 cut(s) 625
BstC8I GCNNGC 2 cut(s) 139, 466
BstF5I GGATG 3 cut(s) 99, 139, 532
BstMAI GTCTC 2 cut(s) 22, 443
BstMCI CGRYCG 3 cut(s) 51, 195, 519
BstMWI GCNNNNNNNGC 2 cut(s) 332, 397
BstSFI CTRYAG 2 cut(s) 72, 704
BstV1I GCAGC 5 cut(s) 58, 129, 338, 403, 448
BstV2I GAAGAC 1 cut(s) 222
BstZI CGGCCG 3 cut(s) 48, 192, 516
BsuRI GGCC 4 cut(s) 50, 194, 248, 518
BtsCI GGATG 3 cut(s) 99, 139, 532
BtsIMutI CAGTG 1 cut(s) 507
Cac8I GCNNGC 2 cut(s) 139, 466
CaiI CAGNNNCTG 1 cut(s) 280
CciNI GCGGCCGC 1 cut(s) 516
Cfr10I RCCGGY 1 cut(s) 331
Cfr13I GGNCC 1 cut(s) 256
CseI GACGC 1 cut(s) 578
Csp6I GTAC 2 cut(s) 595, 622
CviAII CATG 2 cut(s) 184, 553
CviQI GTAC 2 cut(s) 595, 622
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 3 cut(s) 48, 192, 516
EagI CGGCCG 3 cut(s) 48, 192, 516
Eam1104I CTCTTC 1 cut(s) 20
EarI CTCTTC 1 cut(s) 20
EciI GGCGGA 3 cut(s) 506, 630, 697
Ecl136II GAGCTC 1 cut(s) 400
EclXI CGGCCG 3 cut(s) 48, 192, 516
Eco24I GRGCYC 2 cut(s) 368, 402
Eco31I GGTCTC 2 cut(s) 22, 443
Eco47I GGWCC 1 cut(s) 256
Eco52I CGGCCG 3 cut(s) 48, 192, 516
Eco53kI GAGCTC 1 cut(s) 400
Eco88I CYCGRG 6 cut(s) 33, 55, 86, 142, 361, 367
EcoICRI GAGCTC 1 cut(s) 400
EcoT38I GRGCYC 2 cut(s) 368, 402
FaeI CATG 2 cut(s) 187, 556
FaiI YATR 4 cut(s) 185, 230, 554, 706
FaqI GGGAC 2 cut(s) 69, 72
FatI CATG 2 cut(s) 183, 552
FauI CCCGC 1 cut(s) 450
Fnu4HI GCNGC 9 cut(s) 72, 118, 327, 392, 462, 489, 516, 519, 661
FokI GGATG 3 cut(s) 86, 146, 539
FriOI GRGCYC 2 cut(s) 368, 402
Fsp4HI GCNGC 9 cut(s) 72, 118, 327, 392, 462, 489, 516, 519, 661
GluI GCNGC 9 cut(s) 72, 118, 327, 392, 462, 489, 516, 519, 661
GsaI CCCAGC 1 cut(s) 269
GsuI CTGGAG 1 cut(s) 434
HaeIII GGCC 4 cut(s) 50, 194, 248, 518
HapII CCGG 5 cut(s) 323, 332, 347, 395, 512
HgaI GACGC 1 cut(s) 578
Hin1II CATG 2 cut(s) 187, 556
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HindIII AAGCTT 1 cut(s) 298
HpaII CCGG 5 cut(s) 323, 332, 347, 395, 512
Hpy166II GTNNAC 1 cut(s) 166
Hpy188III TCNNGA 5 cut(s) 57, 86, 212, 369, 544
Hpy8I GTNNAC 1 cut(s) 166
Hpy99I CGWCG 5 cut(s) 388, 391, 431, 451, 572
HpyCH4III ACNGT 2 cut(s) 11, 502
HpyCH4IV ACGT 2 cut(s) 156, 624
HpyCH4V TGCA 2 cut(s) 74, 137
HpyF10VI GCNNNNNNNGC 2 cut(s) 332, 397
HpySE526I ACGT 2 cut(s) 156, 624
Hsp92II CATG 2 cut(s) 187, 556
LmnI GCTCC 3 cut(s) 346, 397, 458
Lsp1109I GCAGC 5 cut(s) 58, 129, 338, 403, 448
LweI GCATC 1 cut(s) 124
MaeII ACGT 2 cut(s) 156, 624
MaeIII GTNAC 4 cut(s) 11, 250, 404, 563
MboII GAAGA 4 cut(s) 37, 214, 227, 487
MhlI GDGCHC 2 cut(s) 368, 402
MluCI AATT 2 cut(s) 123, 270
MmeI TCCRAC 1 cut(s) 177
MseI TTAA 2 cut(s) 126, 294
MspI CCGG 5 cut(s) 323, 332, 347, 395, 512
Mva1269I GAATGC 1 cut(s) 537
MwoI GCNNNNNNNGC 2 cut(s) 332, 397
NlaIII CATG 2 cut(s) 187, 556
NlaIV GGNNCC 1 cut(s) 258
NmeAIII GCCGAG 2 cut(s) 170, 220
NmuCI GTSAC 1 cut(s) 250
NotI GCGGCCGC 1 cut(s) 516
PcsI WCGNNNNNNNCGW 3 cut(s) 197, 573, 674
PctI GAATGC 1 cut(s) 537
PfeI GAWTC 5 cut(s) 44, 110, 208, 556, 585
PflFI GACNNNGTC 2 cut(s) 287, 688
PkrI GCNGC 9 cut(s) 73, 119, 328, 393, 463, 490, 517, 520, 662
Ppu21I YACGTR 1 cut(s) 625
Psp124BI GAGCTC 1 cut(s) 402
PspFI CCCAGC 1 cut(s) 265
PspN4I GGNNCC 1 cut(s) 258
PspPI GGNCC 1 cut(s) 256
PstI CTGCAG 1 cut(s) 76
PstNI CAGNNNCTG 1 cut(s) 280
PsyI GACNNNGTC 2 cut(s) 287, 688
RsaI GTAC 2 cut(s) 596, 623
RsaNI GTAC 2 cut(s) 595, 622
SacI GAGCTC 1 cut(s) 402
SaqAI TTAA 2 cut(s) 126, 294
SatI GCNGC 9 cut(s) 72, 118, 327, 392, 462, 489, 516, 519, 661
Sau96I GGNCC 1 cut(s) 256
SduI GDGCHC 2 cut(s) 368, 402
SfaNI GCATC 1 cut(s) 124
SfcI CTRYAG 2 cut(s) 72, 704
SinI GGWCC 1 cut(s) 256
Sse9I AATT 2 cut(s) 123, 270
SsiI CCGC 8 cut(s) 443, 488, 491, 515, 519, 615, 660, 682
SstI GAGCTC 1 cut(s) 402
TaaI ACNGT 2 cut(s) 11, 502
TaiI ACGT 2 cut(s) 159, 627
TaqI TCGA 5 cut(s) 92, 180, 303, 543, 576
TaqII GACCGA 1 cut(s) 277
TasI AATT 2 cut(s) 123, 270
TauI GCSGC 4 cut(s) 491, 518, 521, 663
TfiI GAWTC 5 cut(s) 44, 110, 208, 556, 585
Tru1I TTAA 2 cut(s) 126, 294
Tru9I TTAA 2 cut(s) 126, 294
TscAI CASTG 1 cut(s) 507
TseFI GTSAC 1 cut(s) 250
TseI GCWGC 5 cut(s) 71, 117, 326, 391, 461
Tsp45I GTSAC 1 cut(s) 250
TspGWI ACGGA 4 cut(s) 76, 269, 683, 701
TspRI CASTG 1 cut(s) 507
Tth111I GACNNNGTC 2 cut(s) 287, 688
VpaK11BI GGWCC 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.