RchiOBHm_Chr7g0225791

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
48687380 .. 48688851
1472 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20224

Sequence Viewer

Length: 1335 bp
ATGGCAAGGGTTTATGGTCCAATTTACAAACTCCAACTTGGTACCAAGTTGTGCATTGTGGTGAGCTCACCTGAGCTTGTGAAGCAAGTGGTTCGTGACCATGACACAACATTTTCCAACCGTAACCCTACAATTGCTGATTGGAGGAAGCTGCGCAAGGTGTTTGTGGGTCAGATGCTGAGCAAAATCAACCTTGATGATGGCTATGCTCTGAGAAAAGAGGAGGTGCACAAGTCGATCAGTCATATTTATCATGACAAAATTGGAACCCAAACTGATGTGGGTGAGTTTGCATTTTCCACAGTAATCAACGCAACTTTGCGTATGCTATGGGGCGCAACTCTACAAGGGACTAATTTTGGTGAAGATTATAGGAAATTGGTGGCAGAAATTGTATATCTATTTGCAAAACCAAACATTTCGGACTATTTTCCTGTGCTTGCAAGGTTTGACATACAAGGAATTGAGAGGCAAGCAAAGAAAGTTCAATCCGCGATTGACAAGATTCTAAGTCGTGCCATAGAAGAACAGATGAAGATGCTAGCCTCAGCCAAAATGGGGGAGTACAACAAAAACATGAAAGGAAGGACTTTCTGCAGTTCCTCTTGGAGAACAATAATAATCATGAAGATGGTTCAACATCGTTTACAGTGCAACAACTGTAGGGCTTGCTCATGGTATAGTAATCTAACTTTTGGTTTATTCTTTGATATCGTGGTGGGTGGAACTGACACTACGGCAACAATAGGGGAATGGGTTCTGACTGAGCTGATGCAGCACCCAGAAGAAATGATAAGAGTTCAAGAAGAACTAACACAAATTGTGGGGTTGAACAACTTGGTTGAAGAGTTTCATTTTCCGAAATTACATCACTTAGATGCTGTGATCAAAGAGACATTTTGCTTGCACCCTCCAGTGCCCCTTCTAGTGCCCCGGCGTTCAAGCCAACCTACCATCATTGGTGGCTATTACATACCAAAAGGTTCCACTATTTTTCTCAATGCTTGGGCCATACAGAGAGTTCCAAGTGTTTGGGACGATCCCTTGGAATTTAGACCCCAGAGGTTCCTAAATCCAAGCAATAGCTTTGATTACCAGGGCAACAAATTTCAGTTTCTTCCATTTGGTTATGGGAGGAGAATATGTGCCGGGATTCCCTTAGCAGAGAGGATGCTGTTCTATGTGTTGGCTTCATTCTTGCATTCGTTTGATTGGAAACTGCCTAATGACAAAAAGCTTGACGTTTCAGACAAATTTGGGATTGTGACAAAGAAAAACACTCCACTTATTGCTGTACCAACACCCAGGTTATCTAATTTGGAGCTCTATGCTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

444

Amino Acids

50.9

Weight (kDa)

9.18

Isoelectric Point (pI)

37.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 427 2.4e-74 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 155
Acc65I GGTACC 1 cut(s) 41
AccB1I GGYRCC 1 cut(s) 41
AccII CGCG 1 cut(s) 494
AciI CCGC 1 cut(s) 492
AclWI GGATC 1 cut(s) 1034
AcsI RAATTY 3 cut(s) 1049, 1106, 1253
AfaI GTAC 3 cut(s) 43, 566, 1296
AfiI CCNNNNNNNGG 1 cut(s) 558
AgsI TTSAA 6 cut(s) 488, 638, 803, 832, 845, 942
AjnI CCWGG 2 cut(s) 1095, 1304
AluBI AGCT 7 cut(s) 66, 76, 151, 769, 1086, 1237, 1324
AluI AGCT 7 cut(s) 66, 76, 151, 769, 1086, 1237, 1324
Alw21I GWGCWC 3 cut(s) 68, 231, 1326
Alw26I GTCTC 1 cut(s) 887
Alw44I GTGCAC 1 cut(s) 227
AlwI GGATC 1 cut(s) 1034
AlwNI CAGNNNCTG 1 cut(s) 178
AoxI GGCC 1 cut(s) 1008
ApaLI GTGCAC 1 cut(s) 227
ApeKI GCWGC 2 cut(s) 151, 775
ApoI RAATTY 3 cut(s) 1049, 1106, 1253
Asp700I GAANNNNTTC 2 cut(s) 756, 849
Asp718I GGTACC 1 cut(s) 41
AspLEI GCGC 2 cut(s) 156, 338
AspS9I GGNCC 2 cut(s) 17, 1008
AsuC2I CCSGG 2 cut(s) 934, 1150
AsuHPI GGTGA 4 cut(s) 60, 73, 296, 374
AsuNHI GCTAGC 1 cut(s) 541
AvaII GGWCC 1 cut(s) 17
BaeGI GKGCMC 3 cut(s) 231, 921, 933
BanI GGYRCC 1 cut(s) 41
BanII GRGCYC 2 cut(s) 68, 1326
Bbv12I GWGCWC 3 cut(s) 68, 231, 1326
BbvCI CCTCAGC 1 cut(s) 547
BbvI GCAGC 2 cut(s) 138, 787
BccI CCATC 3 cut(s) 194, 625, 962
BceAI ACGGC 1 cut(s) 753
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BciT130I CCWGG 2 cut(s) 1097, 1306
BclI TGATCA 1 cut(s) 885
BcnI CCSGG 2 cut(s) 934, 1150
BcoDI GTCTC 1 cut(s) 887
BfaI CTAG 2 cut(s) 542, 926
BfmI CTRYAG 2 cut(s) 595, 661
BisI GCNGC 2 cut(s) 152, 776
BlpI GCTNAGC 1 cut(s) 179
BlsI GCNGC 2 cut(s) 153, 777
Bme1390I CCNGG 4 cut(s) 934, 1097, 1150, 1306
Bme18I GGWCC 1 cut(s) 17
BmgT120I GGNCC 2 cut(s) 17, 1008
BmiI GGNNCC 4 cut(s) 43, 268, 985, 1067
BmrFI CCNGG 4 cut(s) 934, 1097, 1150, 1306
BmsI GCATC 5 cut(s) 165, 528, 762, 868, 1161
BmtI GCTAGC 1 cut(s) 545
BpmI CTGGAG 1 cut(s) 897
Bpu10I CCTNAGC 3 cut(s) 72, 547, 1159
Bpu1102I GCTNAGC 1 cut(s) 179
BpuMI CCSGG 2 cut(s) 934, 1150
BsaJI CCNNGG 4 cut(s) 932, 1044, 1096, 1304
BsaXI ACNNNNNCTCC 2 cut(s) 1129, 1159
Bsc4I CCNNNNNNNGG 1 cut(s) 558
Bse1I ACTGG 1 cut(s) 914
BseBI CCWGG 2 cut(s) 1097, 1306
BseDI CCNNGG 4 cut(s) 932, 1044, 1096, 1304
BseGI GGATG 1 cut(s) 1176
BseLI CCNNNNNNNGG 1 cut(s) 558
BseMII CTCAG 5 cut(s) 63, 170, 203, 561, 756
BseNI ACTGG 1 cut(s) 914
BseRI GAGGAG 2 cut(s) 236, 1150
BseSI GKGCMC 3 cut(s) 231, 921, 933
BseXI GCAGC 2 cut(s) 138, 787
Bsh1236I CGCG 1 cut(s) 494
BshFI GGCC 1 cut(s) 1010
BshNI GGYRCC 1 cut(s) 41
BsiHKAI GWGCWC 3 cut(s) 68, 231, 1326
BsiSI CCGG 2 cut(s) 934, 1149
BslFI GGGAC 2 cut(s) 364, 1049
BslI CCNNNNNNNGG 1 cut(s) 558
BsmAI GTCTC 1 cut(s) 887
BsmFI GGGAC 2 cut(s) 364, 1049
BsmI GAATGC 1 cut(s) 1201
BsnI GGCC 1 cut(s) 1010
Bsp1286I GDGCHC 5 cut(s) 68, 231, 921, 933, 1326
Bsp143I GATC 3 cut(s) 237, 885, 1039
Bsp1720I GCTNAGC 1 cut(s) 179
BspACI CCGC 1 cut(s) 492
BspANI GGCC 1 cut(s) 1010
BspCNI CTCAG 5 cut(s) 64, 171, 204, 560, 757
BspFNI CGCG 1 cut(s) 494
BspHI TCATGA 2 cut(s) 253, 624
BspLI GGNNCC 4 cut(s) 43, 268, 985, 1067
BspMAI CTGCAG 1 cut(s) 599
BspOI GCTAGC 1 cut(s) 545
BspPI GGATC 1 cut(s) 1034
BspT107I GGYRCC 1 cut(s) 41
BsrI ACTGG 1 cut(s) 914
BssECI CCNNGG 4 cut(s) 932, 1044, 1096, 1304
BssMI GATC 3 cut(s) 237, 885, 1039
BssT1I CCWWGG 1 cut(s) 1044
Bst2UI CCWGG 2 cut(s) 1097, 1306
Bst4CI ACNGT 4 cut(s) 122, 304, 651, 662
Bst6I CTCTTC 1 cut(s) 840
BstC8I GCNNGC 5 cut(s) 441, 474, 543, 670, 905
BstDEI CTNAG 8 cut(s) 72, 179, 212, 509, 547, 765, 874, 1159
BstF5I GGATG 1 cut(s) 1176
BstFNI CGCG 1 cut(s) 494
BstHHI GCGC 2 cut(s) 156, 338
BstKTI GATC 3 cut(s) 240, 888, 1042
BstMAI GTCTC 1 cut(s) 887
BstMBI GATC 3 cut(s) 237, 885, 1039
BstMWI GCNNNNNNNGC 2 cut(s) 82, 775
BstNI CCWGG 2 cut(s) 1097, 1306
BstSCI CCNGG 4 cut(s) 932, 1095, 1148, 1304
BstSFI CTRYAG 2 cut(s) 595, 661
BstSLI GKGCMC 3 cut(s) 231, 921, 933
BstUI CGCG 1 cut(s) 494
BstV1I GCAGC 2 cut(s) 138, 787
BstXI CCANNNNNNTGG 1 cut(s) 1032
BsuRI GGCC 1 cut(s) 1010
BtsCI GGATG 1 cut(s) 1176
BtsIMutI CAGTG 2 cut(s) 656, 921
Cac8I GCNNGC 5 cut(s) 441, 474, 543, 670, 905
CaiI CAGNNNCTG 1 cut(s) 178
CciI TCATGA 2 cut(s) 253, 624
CfoI GCGC 2 cut(s) 156, 338
Cfr13I GGNCC 2 cut(s) 17, 1008
Csp6I GTAC 3 cut(s) 42, 565, 1295
CviAII CATG 5 cut(s) 101, 254, 577, 625, 675
CviQI GTAC 3 cut(s) 42, 565, 1295
DdeI CTNAG 8 cut(s) 72, 179, 212, 509, 547, 765, 874, 1159
DpnI GATC 3 cut(s) 239, 887, 1041
DpnII GATC 3 cut(s) 237, 885, 1039
Eam1104I CTCTTC 1 cut(s) 840
EarI CTCTTC 1 cut(s) 840
Ecl136II GAGCTC 2 cut(s) 66, 1324
Eco130I CCWWGG 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 68, 1326
Eco32I GATATC 1 cut(s) 712
Eco47I GGWCC 1 cut(s) 17
Eco53kI GAGCTC 2 cut(s) 66, 1324
EcoICRI GAGCTC 2 cut(s) 66, 1324
EcoRII CCWGG 2 cut(s) 1095, 1304
EcoRV GATATC 1 cut(s) 712
EcoT14I CCWWGG 1 cut(s) 1044
EcoT38I GRGCYC 2 cut(s) 68, 1326
ErhI CCWWGG 1 cut(s) 1044
FaeI CATG 5 cut(s) 104, 257, 580, 628, 678
FaqI GGGAC 2 cut(s) 364, 1049
FatI CATG 5 cut(s) 100, 253, 576, 624, 674
FbaI TGATCA 1 cut(s) 885
Fnu4HI GCNGC 2 cut(s) 152, 776
FokI GGATG 1 cut(s) 1183
FriOI GRGCYC 2 cut(s) 68, 1326
Fsp4HI GCNGC 2 cut(s) 152, 776
FspBI CTAG 2 cut(s) 542, 926
FspI TGCGCA 1 cut(s) 155
GlaI GCGC 2 cut(s) 155, 337
GluI GCNGC 2 cut(s) 152, 776
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 1 cut(s) 1010
HapII CCGG 2 cut(s) 934, 1149
HhaI GCGC 2 cut(s) 156, 338
Hin1II CATG 5 cut(s) 104, 257, 580, 628, 678
Hin6I GCGC 2 cut(s) 154, 336
HinP1I GCGC 2 cut(s) 154, 336
HindIII AAGCTT 1 cut(s) 1235
HinfI GANTC 2 cut(s) 505, 1153
HpaII CCGG 2 cut(s) 934, 1149
HphI GGTGA 4 cut(s) 60, 73, 296, 374
Hpy166II GTNNAC 2 cut(s) 229, 647
Hpy188I TCNGA 6 cut(s) 174, 213, 424, 762, 861, 1249
Hpy188III TCNNGA 4 cut(s) 95, 254, 625, 803
Hpy8I GTNNAC 2 cut(s) 229, 647
HpyAV CCTTC 2 cut(s) 579, 932
HpyCH4III ACNGT 4 cut(s) 122, 304, 651, 662
HpyCH4IV ACGT 1 cut(s) 1242
HpyF10VI GCNNNNNNNGC 2 cut(s) 82, 775
HpyF3I CTNAG 8 cut(s) 72, 179, 212, 509, 547, 765, 874, 1159
HpySE526I ACGT 1 cut(s) 1242
Hsp92II CATG 5 cut(s) 104, 257, 580, 628, 678
HspAI GCGC 2 cut(s) 154, 336
KpnI GGTACC 1 cut(s) 45
Ksp22I TGATCA 1 cut(s) 885
Kzo9I GATC 3 cut(s) 237, 885, 1039
LmnI GCTCC 1 cut(s) 1321
Lsp1109I GCAGC 2 cut(s) 138, 787
LweI GCATC 5 cut(s) 165, 528, 762, 868, 1161
MaeI CTAG 2 cut(s) 542, 926
MaeII ACGT 1 cut(s) 1242
MaeIII GTNAC 3 cut(s) 95, 122, 1264
MalI GATC 3 cut(s) 239, 887, 1041
MboI GATC 3 cut(s) 237, 885, 1039
MboII GAAGA 8 cut(s) 377, 536, 547, 640, 797, 818, 857, 1109
MfeI CAATTG 1 cut(s) 132
MhlI GDGCHC 5 cut(s) 68, 231, 921, 933, 1326
MmeI TCCRAC 2 cut(s) 58, 141
MroXI GAANNNNTTC 2 cut(s) 756, 849
MseI TTAA 1 cut(s) 1333
MslI CAYNNNNRTG 3 cut(s) 59, 629, 876
MspI CCGG 2 cut(s) 934, 1149
MspR9I CCNGG 4 cut(s) 934, 1097, 1150, 1306
MunI CAATTG 1 cut(s) 132
Mva1269I GAATGC 1 cut(s) 1201
MvaI CCWGG 2 cut(s) 1097, 1306
MvnI CGCG 1 cut(s) 494
MwoI GCNNNNNNNGC 2 cut(s) 82, 775
NciI CCSGG 2 cut(s) 934, 1150
NdeII GATC 3 cut(s) 237, 885, 1039
NheI GCTAGC 1 cut(s) 541
NlaIII CATG 5 cut(s) 104, 257, 580, 628, 678
NlaIV GGNNCC 4 cut(s) 43, 268, 985, 1067
NmuCI GTSAC 2 cut(s) 95, 1264
NsbI TGCGCA 1 cut(s) 155
PagI TCATGA 2 cut(s) 253, 624
PctI GAATGC 1 cut(s) 1201
PdmI GAANNNNTTC 2 cut(s) 756, 849
PfeI GAWTC 2 cut(s) 505, 1153
PkrI GCNGC 2 cut(s) 153, 777
Psp124BI GAGCTC 2 cut(s) 68, 1326
Psp6I CCWGG 2 cut(s) 1095, 1304
PspGI CCWGG 2 cut(s) 1095, 1304
PspN4I GGNNCC 4 cut(s) 43, 268, 985, 1067
PspPI GGNCC 2 cut(s) 17, 1008
PsrI GAACNNNNNNTAC 2 cut(s) 718, 750
PstI CTGCAG 1 cut(s) 599
PstNI CAGNNNCTG 1 cut(s) 178
RsaI GTAC 3 cut(s) 43, 566, 1296
RsaNI GTAC 3 cut(s) 42, 565, 1295
RseI CAYNNNNRTG 3 cut(s) 59, 629, 876
SacI GAGCTC 2 cut(s) 68, 1326
SaqAI TTAA 1 cut(s) 1333
SatI GCNGC 2 cut(s) 152, 776
Sau3AI GATC 3 cut(s) 237, 885, 1039
Sau96I GGNCC 2 cut(s) 17, 1008
ScrFI CCNGG 4 cut(s) 934, 1097, 1150, 1306
SduI GDGCHC 5 cut(s) 68, 231, 921, 933, 1326
SfaNI GCATC 5 cut(s) 165, 528, 762, 868, 1161
SfcI CTRYAG 2 cut(s) 595, 661
SinI GGWCC 1 cut(s) 17
SmiMI CAYNNNNRTG 3 cut(s) 59, 629, 876
SsiI CCGC 1 cut(s) 492
SspMI CTAG 2 cut(s) 542, 926
SstI GAGCTC 2 cut(s) 68, 1326
StyD4I CCNGG 4 cut(s) 932, 1095, 1148, 1304
StyI CCWWGG 1 cut(s) 1044
TaaI ACNGT 4 cut(s) 122, 304, 651, 662
TaiI ACGT 1 cut(s) 1245
TaqI TCGA 1 cut(s) 236
TatI WGTACW 1 cut(s) 564
TfiI GAWTC 2 cut(s) 505, 1153
Tru1I TTAA 1 cut(s) 1333
Tru9I TTAA 1 cut(s) 1333
TscAI CASTG 2 cut(s) 656, 921
TseFI GTSAC 2 cut(s) 95, 1264
TseI GCWGC 2 cut(s) 151, 775
Tsp45I GTSAC 2 cut(s) 95, 1264
TspDTI ATGAA 5 cut(s) 548, 593, 641, 842, 1182
TspRI CASTG 2 cut(s) 656, 921
VneI GTGCAC 1 cut(s) 227
VpaK11BI GGWCC 1 cut(s) 17
XapI RAATTY 3 cut(s) 1049, 1106, 1253
XmnI GAANNNNTTC 2 cut(s) 756, 849
XspI CTAG 2 cut(s) 542, 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.