Prupe.5G078600_v2.0.a1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
9277041 .. 9281101
4061 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G078600.1

Sequence Viewer

Length: 939 bp
ATGTGGTGGCTGAAATGGTGGAGTTGCTTGGGAAGGGAAATATTTCCGACTTTTTTCCTTGGCTTGCCAGGTTTGATGTGCAAGGAATTGCGAGGCGTGCGAAAAGATTCCTTGCACATCAAACCTGTGACTGAAAAGATTCTCAACTCTGCCATTGAAAAGCAGATGAGTGAGGCAGCAGAGCAAGATGGGGGGCTCTCACTAAAGCATGAAAGGAAGGGCTTTCTGCAGTTCCTGTTGGAGCTTAATGAGCATGGAAATGGTGCAGAATCGCTTACTTTGCAACAAATCAAGGCCCTACTCACGGACATTGTGGCTGGTGGTACTGATACCACAGCAACAATGGTGGAATGGGTAATGGCTGAGCTGATGCAACACCCAGATGACCTGAAAAAAGTTCAACAAGAACTGAAAGAAGTTGTGGGTTTGGACAACTTGGTTGAAGAGTCTCATGTACCTAAATTACATTACTTAGATGTTGTGATTAAGGAGACATCTAGATTGCACCCTGCTTTCCCTCTTCTGGTACCCCATTGTCCAAGCCAATCCACCACCATTGGAGGGTTCAAAATACCAAAAGGTTCAAATGTTTTTTTAAATGTTTGGGCCATTCACAGAGACCCTAATGTTTGGGACAATCCCTTGGAATTTAGGCCCAAGAGGTTCCTCAATGATCCTCCCACCAACAACATTCATTACAATGGCAATAAGTTGGAATATCTTCCATTTGGTTCTGGGAGAAGAATGTGTCCTGGGATTCCCTTAGCAGAGAGGATGATGATCTATGTGTTGGCTTCATTTTTGCATTCATTTGAGTGGAGGTTGCCCAATGATGCAAAGCTTGACCTTCAAGACAAATTTGGGATTGTGACAAAGAAAATGACTCCATTAGTTGTCATTCCAACACCCAGGTTATCTAAATTGGAGCTCTATACTTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

313

Amino Acids

35.6

Weight (kDa)

7.18

Isoelectric Point (pI)

38.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 526
AccB1I GGYRCC 1 cut(s) 526
AclWI GGATC 1 cut(s) 668
AcsI RAATTY 2 cut(s) 647, 857
AfaI GTAC 3 cut(s) 325, 456, 528
AfiI CCNNNNNNNGG 3 cut(s) 304, 523, 561
AgsI TTSAA 6 cut(s) 158, 401, 443, 568, 585, 851
AjnI CCWGG 3 cut(s) 67, 751, 908
AluBI AGCT 4 cut(s) 244, 367, 841, 928
AluI AGCT 4 cut(s) 244, 367, 841, 928
Alw21I GWGCWC 1 cut(s) 930
Alw26I GTCTC 3 cut(s) 453, 485, 612
AlwI GGATC 1 cut(s) 668
AlwNI CAGNNNCTG 1 cut(s) 235
AoxI GGCC 3 cut(s) 294, 606, 653
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 2 cut(s) 647, 857
Asp700I GAANNNNTTC 4 cut(s) 42, 106, 138, 720
Asp718I GGTACC 1 cut(s) 526
AspS9I GGNCC 3 cut(s) 295, 606, 654
BanI GGYRCC 1 cut(s) 526
BanII GRGCYC 2 cut(s) 198, 930
Bbv12I GWGCWC 1 cut(s) 930
BbvI GCAGC 1 cut(s) 188
BccI CCATC 1 cut(s) 182
BciT130I CCWGG 3 cut(s) 69, 753, 910
BcoDI GTCTC 3 cut(s) 453, 485, 612
BfaI CTAG 1 cut(s) 498
BfmI CTRYAG 1 cut(s) 227
BisI GCNGC 1 cut(s) 177
BlpI GCTNAGC 1 cut(s) 363
BlsI GCNGC 1 cut(s) 178
Bme1390I CCNGG 3 cut(s) 69, 753, 910
BmgT120I GGNCC 3 cut(s) 295, 606, 654
BmiI GGNNCC 2 cut(s) 528, 665
BmrFI CCNGG 3 cut(s) 69, 753, 910
BmsI GCATC 2 cut(s) 360, 823
Bpu10I CCTNAGC 1 cut(s) 763
Bpu1102I GCTNAGC 1 cut(s) 363
BsaBI GATNNNNATC 1 cut(s) 779
BsaI GGTCTC 1 cut(s) 612
BsaJI CCNNGG 4 cut(s) 58, 642, 752, 908
Bsc4I CCNNNNNNNGG 3 cut(s) 304, 523, 561
Bse8I GATNNNNATC 1 cut(s) 779
BseBI CCWGG 3 cut(s) 69, 753, 910
BseDI CCNNGG 4 cut(s) 58, 642, 752, 908
BseGI GGATG 1 cut(s) 780
BseJI GATNNNNATC 1 cut(s) 779
BseLI CCNNNNNNNGG 3 cut(s) 304, 523, 561
BseMII CTCAG 1 cut(s) 354
BseXI GCAGC 1 cut(s) 188
BsgI GTGCAG 1 cut(s) 285
BshFI GGCC 3 cut(s) 296, 608, 655
BshNI GGYRCC 1 cut(s) 526
BsiHKAI GWGCWC 1 cut(s) 930
BslFI GGGAC 1 cut(s) 647
BslI CCNNNNNNNGG 3 cut(s) 304, 523, 561
BsmAI GTCTC 3 cut(s) 453, 485, 612
BsmFI GGGAC 1 cut(s) 647
BsmI GAATGC 1 cut(s) 805
BsnI GGCC 3 cut(s) 296, 608, 655
Bso31I GGTCTC 1 cut(s) 612
Bsp1286I GDGCHC 2 cut(s) 198, 930
Bsp143I GATC 2 cut(s) 673, 780
Bsp1720I GCTNAGC 1 cut(s) 363
BspANI GGCC 3 cut(s) 296, 608, 655
BspCNI CTCAG 1 cut(s) 355
BspLI GGNNCC 2 cut(s) 528, 665
BspMAI CTGCAG 1 cut(s) 231
BspPI GGATC 1 cut(s) 668
BspT107I GGYRCC 1 cut(s) 526
BspTNI GGTCTC 1 cut(s) 612
BssECI CCNNGG 4 cut(s) 58, 642, 752, 908
BssMI GATC 2 cut(s) 673, 780
BssT1I CCWWGG 2 cut(s) 58, 642
Bst2UI CCWGG 3 cut(s) 69, 753, 910
Bst6I CTCTTC 2 cut(s) 438, 525
BstC8I GCNNGC 2 cut(s) 65, 98
BstDEI CTNAG 4 cut(s) 363, 472, 763, 936
BstF5I GGATG 1 cut(s) 780
BstKTI GATC 2 cut(s) 676, 783
BstMAI GTCTC 3 cut(s) 453, 485, 612
BstMBI GATC 2 cut(s) 673, 780
BstMWI GCNNNNNNNGC 3 cut(s) 97, 250, 280
BstNI CCWGG 3 cut(s) 69, 753, 910
BstSCI CCNGG 3 cut(s) 67, 751, 908
BstSFI CTRYAG 1 cut(s) 227
BstV1I GCAGC 1 cut(s) 188
BsuRI GGCC 3 cut(s) 296, 608, 655
BtsCI GGATG 1 cut(s) 780
Cac8I GCNNGC 2 cut(s) 65, 98
CaiI CAGNNNCTG 1 cut(s) 235
Cfr13I GGNCC 3 cut(s) 295, 606, 654
Csp6I GTAC 3 cut(s) 324, 455, 527
CspCI CAANNNNNGTGG 4 cut(s) 327, 362, 538, 573
CviAII CATG 3 cut(s) 209, 254, 452
CviQI GTAC 3 cut(s) 324, 455, 527
DdeI CTNAG 4 cut(s) 363, 472, 763, 936
DpnI GATC 2 cut(s) 675, 782
DpnII GATC 2 cut(s) 673, 780
DraI TTTAAA 1 cut(s) 597
Eam1104I CTCTTC 2 cut(s) 438, 525
EarI CTCTTC 2 cut(s) 438, 525
Ecl136II GAGCTC 1 cut(s) 928
Eco130I CCWWGG 2 cut(s) 58, 642
Eco24I GRGCYC 2 cut(s) 198, 930
Eco31I GGTCTC 1 cut(s) 612
Eco53kI GAGCTC 1 cut(s) 928
EcoICRI GAGCTC 1 cut(s) 928
EcoO109I RGGNCCY 1 cut(s) 295
EcoRII CCWGG 3 cut(s) 67, 751, 908
EcoT14I CCWWGG 2 cut(s) 58, 642
EcoT38I GRGCYC 2 cut(s) 198, 930
ErhI CCWWGG 2 cut(s) 58, 642
FaeI CATG 3 cut(s) 212, 257, 455
FaiI YATR 5 cut(s) 210, 255, 453, 786, 933
FaqI GGGAC 1 cut(s) 647
FatI CATG 3 cut(s) 208, 253, 451
Fnu4HI GCNGC 1 cut(s) 177
FokI GGATG 1 cut(s) 787
FriOI GRGCYC 2 cut(s) 198, 930
Fsp4HI GCNGC 1 cut(s) 177
FspBI CTAG 1 cut(s) 498
GluI GCNGC 1 cut(s) 177
HaeIII GGCC 3 cut(s) 296, 608, 655
Hin1II CATG 3 cut(s) 212, 257, 455
HindIII AAGCTT 1 cut(s) 839
HinfI GANTC 6 cut(s) 107, 139, 269, 446, 757, 883
Hpy188I TCNGA 1 cut(s) 48
Hpy188III TCNNGA 2 cut(s) 498, 851
HpyAV CCTTC 3 cut(s) 27, 211, 857
HpyCH4V TGCA 9 cut(s) 81, 115, 229, 266, 283, 373, 505, 805, 836
HpyF10VI GCNNNNNNNGC 3 cut(s) 97, 250, 280
HpyF3I CTNAG 4 cut(s) 363, 472, 763, 936
Hsp92II CATG 3 cut(s) 212, 257, 455
KpnI GGTACC 1 cut(s) 530
Kzo9I GATC 2 cut(s) 673, 780
LmnI GCTCC 2 cut(s) 241, 925
Lsp1109I GCAGC 1 cut(s) 188
LweI GCATC 2 cut(s) 360, 823
MaeI CTAG 1 cut(s) 498
MaeIII GTNAC 2 cut(s) 127, 868
MalI GATC 2 cut(s) 675, 782
MboI GATC 2 cut(s) 673, 780
MboII GAAGA 4 cut(s) 455, 512, 713, 753
MhlI GDGCHC 2 cut(s) 198, 930
MluCI AATT 5 cut(s) 86, 461, 647, 857, 920
MlyI GAGTC 2 cut(s) 455, 877
MmeI TCCRAC 4 cut(s) 71, 219, 693, 926
MnlI CCTC 9 cut(s) 86, 166, 528, 554, 654, 677, 687, 765, 813
MroXI GAANNNNTTC 4 cut(s) 42, 106, 138, 720
MseI TTAA 3 cut(s) 246, 486, 596
MslI CAYNNNNRTG 4 cut(s) 258, 381, 699, 814
MspR9I CCNGG 3 cut(s) 69, 753, 910
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 3 cut(s) 69, 753, 910
MwoI GCNNNNNNNGC 3 cut(s) 97, 250, 280
NdeII GATC 2 cut(s) 673, 780
NlaIII CATG 3 cut(s) 212, 257, 455
NlaIV GGNNCC 2 cut(s) 528, 665
NmuCI GTSAC 2 cut(s) 127, 868
PctI GAATGC 1 cut(s) 805
PdmI GAANNNNTTC 4 cut(s) 42, 106, 138, 720
PfeI GAWTC 4 cut(s) 107, 139, 269, 757
PkrI GCNGC 1 cut(s) 178
PleI GAGTC 2 cut(s) 454, 877
PpsI GAGTC 2 cut(s) 454, 877
Psp124BI GAGCTC 1 cut(s) 930
Psp6I CCWGG 3 cut(s) 67, 751, 908
PspGI CCWGG 3 cut(s) 67, 751, 908
PspN4I GGNNCC 2 cut(s) 528, 665
PspPI GGNCC 3 cut(s) 295, 606, 654
PstI CTGCAG 1 cut(s) 231
PstNI CAGNNNCTG 1 cut(s) 235
RsaI GTAC 3 cut(s) 325, 456, 528
RsaNI GTAC 3 cut(s) 324, 455, 527
RseI CAYNNNNRTG 4 cut(s) 258, 381, 699, 814
SacI GAGCTC 1 cut(s) 930
SaqAI TTAA 3 cut(s) 246, 486, 596
SatI GCNGC 1 cut(s) 177
Sau3AI GATC 2 cut(s) 673, 780
Sau96I GGNCC 3 cut(s) 295, 606, 654
SchI GAGTC 2 cut(s) 455, 877
ScrFI CCNGG 3 cut(s) 69, 753, 910
SduI GDGCHC 2 cut(s) 198, 930
SfaNI GCATC 2 cut(s) 360, 823
SfcI CTRYAG 1 cut(s) 227
SmiMI CAYNNNNRTG 4 cut(s) 258, 381, 699, 814
Sse9I AATT 5 cut(s) 86, 461, 647, 857, 920
SspI AATATT 1 cut(s) 42
SspMI CTAG 1 cut(s) 498
SstI GAGCTC 1 cut(s) 930
StyD4I CCNGG 3 cut(s) 67, 751, 908
StyI CCWWGG 2 cut(s) 58, 642
TasI AATT 5 cut(s) 86, 461, 647, 857, 920
TfiI GAWTC 4 cut(s) 107, 139, 269, 757
Tru1I TTAA 3 cut(s) 246, 486, 596
Tru9I TTAA 3 cut(s) 246, 486, 596
TseFI GTSAC 2 cut(s) 127, 868
TseI GCWGC 1 cut(s) 176
Tsp45I GTSAC 2 cut(s) 127, 868
TspDTI ATGAA 4 cut(s) 225, 683, 786, 798
TspGWI ACGGA 1 cut(s) 320
XapI RAATTY 2 cut(s) 647, 857
XbaI TCTAGA 1 cut(s) 497
XcmI CCANNNNNNNNNTGG 1 cut(s) 340
XmnI GAANNNNTTC 4 cut(s) 42, 106, 138, 720
XspI CTAG 1 cut(s) 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.